Biogeochemistry of Wetlands Science and Applications Course Objectives

Total Page:16

File Type:pdf, Size:1020Kb

Biogeochemistry of Wetlands Science and Applications Course Objectives 6/22/2008 Institute of Food and Agricultural Sciences (IFAS) Biogeoche mist r y of W etl an ds Science and Applications June 23 – 26, 2008 Gainesville, Florida Wetland Biogeochemistry Laboratory Soil and Water Science Department University of Florida Instructors: Mark Clark; Patrick Inglett; James Jawitz; Todd Osborne K. Ramesh Reddy 6/22/2008 WBL 1 Biogeochemistry of Wetlands Science and Applications Course Objectives The objective of this course is to provide participants with the basic concepts involved in biogeochemical cycling of nutrients, metals, and toxic organic compounds in wetlands and aquatic systems. The Environmental and ecological significance of biogeochemical processes will be described in relation to elemental cycling, water quality, carbon sequestration, and global climate change 6/22/2008 WBL 2 1 6/22/2008 Biogeochemistry of Wetlands Science and Applications Course Modules Course Modules Introduction Sulfur cycling processes Wetland types and communities Iron, manganese, and other Wetland hydrology metals Biogeochemical properties Toxic organic compounds Electrochemical properties Soil-water exchange processes Soil oxygen demand Biogeochemical indicators Adappptation of plants to wetland Novel processes and new tools soil anaerobiosis Carbon cycling processes Nitrogen cycling processes Phosphorus cycling processes 6/22/2008 WBL 3 Biogeochemistry of Wetlands Science and Applications Lecture Outline Introduction for lecture topic Learning objectives Basic principles related to the topic Examples of current research Examples of applications to address real world problems Key points learned from the topic 6/22/2008 WBL 4 2 6/22/2008 Biogeochemistry of Wetlands Science and Applications Learning Objectives Define biogeochemical features of wetlands Define Hydrologic processes Understand the differences among different wetland soils Describe oxidation-reduction reactions in wetlands Understand the organic matter decomposition processes and long- term storage of nutrients and contaminants Determine the role of nitrogen, phosphorus, and sulfur cycling processes in regulating water quality Understand the role of metals in regulating nutrient mobility and reactivity Define the role of exchange processes between soil and water column on water quality Identify key biogeochemical indicators for wetland assessment 6/22/2008 WBL 5 BIOGEOCHEMISTRY z The study of exchange or flux of materials between living and non-living components of the biosphere G. E. Hutchinson (1944) 6/22/2008 WBL 6 3 6/22/2008 BIOGEOCHEMISTS Vladimir Ivanovich Vernadsky G. Evelyn Hutchinson 1863-1945 1901-1991 http://www.nceas.ucsb.edu/~alroy/lefa/Hutchinson.html http://www.answers.com/topic/biogeochemistry?cat=technology Fertilizers, Animal wastes Biosolids, Wastewater Uplands Sink/source Wetlands Sink/source Aquatic Systems Sink/source 6/22/2008 WBL 8 4 6/22/2008 Biogeochemical Cycles – Organic Matter in a Wetland N C P S 6/22/2008 WBL 9 Biogeochemistry of wetlands Plant biomass P Inflow Periphyton P Litterfall Outflow . PIP DIP POP DOP DIP PeatPeat DIP [Blaccretionac k BoxDIP ] DOP PIP DOP POP [Fe, Al or Ca- Adsorbed bound P] P 6/22/2008 WBL 10 5 6/22/2008 OXYGEN NITROGEN PHOSPHORUS Carbon [Plant detritus, microbial biomass, and soil organic matter] SULFUR METALS XENOBIOTICS 6/22/2008 WBL 11 Biogeochemical Processes zCarbon zPhysical zNitrogen zChemical zPhosphorus zBiological zSulfur zMetals zToxic Organics 6/22/2008 WBL 12 6 6/22/2008 Spatial and Temporal Scales landscapes, global, watersheds regions, states km >1,000 km Time soil m aggregate pedons, clay particle, mm field plots microbes um nm Atoms, molecules Length Plant Community Loading Hydroperiod Organic Matter Carbon(Carbon) (productivity) SulfurSulfur Cycle NitrogenNitrogen Cycle Cycle cycle PhosphorusPhosphorus Cycle Cycle Stable Organic Matter (P(Accretion/Stability) Accretion/Stability) 6/22/2008 WBL 14 7 6/22/2008 Biogeochemical Cycles – Linkages Physical Processes Organic Matter Chemical Biological Processes Processes N C P S Climate Change Carbon Eutrophication Sequestration 6/22/2008 WBL 15 Biogeochemical Cycles – Linkages at Global Scale Increased nutrient loads …high primary productivity ..eutrophication High primary productivity ….increased rates of organic matter accumulation… carbon sequestration High carbon sequestration in soils ..increased rates of microbial activities Increased rates of microbial activities … idllfhincreased levels of greenhouse gases Increased levels of greenhouse gases….climate change 6/22/2008 WBL 16 8 6/22/2008 Biogeochemistry of Wetlands Science and Applications Upon completion of this course, participants should be able to: Unique features of wetland ecosystems Identify role of soils as long-term integrators of elemental storage and ecosystem processes Describe basic concepts on elemental cycling in soil and water column of wetlands Define the role of organic matter decomposition processes and long-term accretion of nutrients and contaminants Assess the nitrogen processing capacity of wetlands Evaluate the ppphosphorus retention cap pyacity of wetlands Define the fate of sulfur, metals, and toxic organic compounds in wetlands Describe the role of exchange processes between soil and water column on internal load Identify key biogeochemical indicators for wetland monitoring and assessment 6/22/2008 WBL 17 Biogeochemistry of Wetlands http://wetlands.ifas.ufl.edu 6/22/2008 http://soils.ifas.ufl.edu WBL 18 9.
Recommended publications
  • Ph.D. Positions in Biogeochemistry / Environmental Chemistry / Boreal Forest
    Ph.D. positions in Biogeochemistry / Environmental chemistry / Boreal forest The Laboratory of Terrestrial Biogeochemistry of the Université de Sherbrooke (Qc, Canada) is seeking for applicants to fill one or two Ph.D positions in Biogeochemistry / Environmental chemistry. Presentation of the University: Located in Canada, in the Province of Quebec, the Université de Sherbrooke is a French- speaking institution that offers you the opportunity to benefit from an academic education that is recognized and valued around the world. The Université de Sherbrooke has been welcoming international students ever since it was founded and each year the numbers increase. Currently, more than 1600 foreign students from 120 countries worldwide attend the Université de Sherbrooke. In Quebec, universities are the only source of higher education. The North-American system is not comprised of grandes écoles or private higher education institutions. North-American universities are considered prestigious establishments and students receive high quality training and recognized diplomas. They can be compared to the European institutes of higher education (grandes écoles) for the quality of education. The Université de Sherbrooke is situated in the southern part of Quebec, 150 km from Montréal, 220 km from Québec City and some 40 km from the American border. http://www.usherbrooke.ca/ Presentation of the Laboratory: The research developed in the Laboratory aims to characterize metal dynamics in soil and its impact on microbial activity with a specific interest for N2 fixing organisms. We are particularly focusing on metal acquisition and use by N2 fixing organisms. Our research relies on a strong expertise in analytical chemistry, associated to solid knowledge in biology and soil sciences.
    [Show full text]
  • The Role of Dust in Climate Change: a Biogeochemistry Perspective Gisela Winckler1, F
    92 WORKSHOP REPORT doi.org/10.22498/pages.26.2.92 The role of dust in climate change: A biogeochemistry perspective Gisela Winckler1, F. Lambert2 and E. Shoenfelt1 Las Cruces, Chile, 8-10 January 2018 Mineral-dust aerosols are critically important components of climate and Earth system dynamics as they affect radiative forcing, precipitation, atmospheric chemistry, sur- face albedo of ice sheets, and marine and terrestrial biogeochemistry, over significant portions of the planet. Dust-borne iron is recognized to be an important micronutrient in regulating the magnitude and dynamics of ocean primary productivity and affecting the carbon cycle under past and modern climate conditions. Paleodata suggest large fluctua- tions in atmospheric dust over the geologi- cal past. However, dust-transport models struggle to reproduce observed spatial and temporal dust-flux variability. In addition, ob- servational and modeling studies based in the current climate suggest that not all iron Figure 1: representation of the major processes in the ocean iron cycle from Tagliabue et al. 2017. reprinted by in dust is equally available to continental and permission from Springer Nature. ocean biota. Iron solubility varies dramati- cally, depending on mineralogy and state of emissions, from geochemically identifying that may have been more highly impacted by soils, as well as atmospheric processing by and tracing source regions to deposition in glacier physical weathering, and have been acids. Modeling studies, however, still mostly the surface ocean. Participants discussed the shown to have a different mineral composi- assume constant solubility. effects on the solubility and bioavailability tion as a result. The goal of this effort is to of iron at each of these stations in the dust combine the highly varied range of expertise The PAGES Dust Impact on Climate and cycle, including the influence of dust source to better quantify the bioavailable iron in dif- Environment (DICE) working group held its and mineralogy on dust solubility and bio- ferent dust sources across space and time.
    [Show full text]
  • Ecological Biogeochemistry Schedule (September 6, 2005)
    2005 Ecological Biogeochemistry Schedule (September 6, 2005) EFB 415 & 610 Time: Monday and Wednesday 12:45 p.m. to 2:15 p.m. Place: Illick 16 Instructor: M.J. Mitchell Texts: Likens, G.E. and F.H. Bormann. 1995. Biogeochemistry of a Forested Ecosystem. Second Edition. Springer- Verlag, New York. 159 p. Schlesinger, W.H. 1997. Biogeochemistry: an Analysis of Global Change. Second Edition. Academic Press, San Diego, CA. 588 p. SCHEDULE Date Topic Lecturer Readings or Discussion Likens & Schlesinger Other (Subject to Change)1 Bormann Mon., Introduction to Course Mitchell Chapter 1 Chapter 1 Aug. 29 Wed., Major Pools and Processes Mitchell Chapters 2, 3 Chapters 2 & 10 Aug. in Biogeochemistry & 4. 31 Mon., Labor Day, No Class Sept. 5 Wed., Small watershed approach Mitchell Review Church (1997)2, Sept., with special attention to Chapters 1-3. The Hubbard Brook Ecosystem Study 7 HBEF. Introduction to (1995)3 student projects and Groffman et al. (2004)4 presentations. Mon., Instrumentation Mitchell Mitchell et al. (2001)5 Sept. 12 Wed., History of Mitchell Gorham (1991)6 Sept. Biogeochemistry 14 Date Topic Lecturer Readings or Discussion Likens & Schlesinger Other (Subject to Change)1 Bormann Mon., Introduction to Carbon Mitchell Chapter 5, Falkowski et al. (2000)7 Sept. Preliminary project topics Chapter 7 (p. Goodale et al. (2002)8 19 due for student proposals. 246-251), Chapter 9 (p. 301-307) Wed., Carbon continued Mitchell Chapter 11 Fahey et al. (2005)9 Sept. Raymond and Cole (2003)10 21 Mon., Discussion on carbon and Mitchell Field and Fung (1999)11 Sept. global change.
    [Show full text]
  • The Atom, the Environment and Sustainable Development
    The Atom, the Environment and Sustainable Development International Atomic Energy Agency Vienna International Centre, PO Box 100 1400 Vienna, Austria 14-32961 (c) IAEA, 2014 Printed by the IAEA in Austria Printed on FSC certified paper. September 2014 www.iaea.org/Publications/Booklets The Atom, the Environment and Sustainable Development Table of Contents Foreword 3 The IAEA and the Environment 5 Understanding the Environment 6 Water and Climate Change 6 Groundwater and Surface Water Interactions 6 Water Quality and Pollutants 7 Ocean Acidification 7 Oceanic Carbon Cycle 8 Marine Organisms: Bioaccumulation of Contaminants 9 Soil-Water-Plant Systems 9 Soil Erosion 10 Agriculture and Climate Change 10 Nitrogen Sources in Agriculture 11 Animal Digestion 11 Livestock Genomes 12 Behaviour of Radionuclides in the Environment 13 Protecting People and the Environment 15 Setting the Standard 15 Clean Technology 15 Biogas Technology 16 Sustainable Base-Load Power Generation 16 Managing Discharges from Radiological Sources 16 Harmful Algal Blooms and Seafood Safety 17 Pesticides and Biological Control Agents 18 Invasive Pests and Food Waste 19 Mutation Breeding 19 Monitoring the Environment and Contaminants 21 Improving Capacity to Monitor Environmental Contaminants 21 Environmental Monitoring Networks 23 Food Safety 23 Monitoring Radionuclides from Nuclear Facilities and Applications 24 Radioactive Waste and Spent Fuel Management 24 Waste Management from Nuclear Accidents 25 Environmental Remediation 27 Setting the Baseline 27 Building Capacity for Remediation 28 Remediation Technology 28 Conclusion 29 Foreword The IAEA has a broad mandate to facilitate areas mentioned above, nuclear science and nuclear applications in a number of areas and technology can make a particularly valuable scientific disciplines.
    [Show full text]
  • Nanostructure of Biogenic Versus Abiogenic Calcium Carbonate Crystals
    Nanostructure of biogenic versus abiogenic calcium carbonate crystals JAROSŁAW STOLARSKI and MACIEJ MAZUR Stolarski, J. and Mazur, M. 2005. Nanostructure of biogenic versus abiogenic calcium carbonate crystals. Acta Palae− ontologica Polonica 50 (4): 847–865. The mineral phase of the aragonite skeletal fibers of extant scleractinians (Favia, Goniastrea) examined with Atomic Force Microscope (AFM) consists entirely of grains ca. 50–100 nm in diameter separated from each other by spaces of a few nanometers. A similar pattern of nanograin arrangement was observed in basal calcite skeleton of extant calcareous sponges (Petrobiona) and aragonitic extant stylasterid coralla (Adelopora). Aragonite fibers of the fossil scleractinians: Neogene Paracyathus (Korytnica, Poland), Cretaceous Rennensismilia (Gosau, Austria), Trochocyathus (Black Hills, South Dakota, USA), Jurassic Isastraea (Ostromice, Poland), and unidentified Triassic tropiastraeid (Alpe di Specie, It− aly) are also nanogranular, though boundaries between individual grains occasionally are not well resolved. On the other hand, in diagenetically altered coralla (fibrous skeleton beside aragonite bears distinct calcite signals) of the Triassic cor− als from Alakir Cay, Turkey (Pachysolenia), a typical nanogranular pattern is not recognizable. Also aragonite crystals produced synthetically in sterile environment did not exhibit a nanogranular pattern. Unexpectedly, nanograins were rec− ognized in some crystals of sparry calcite regarded as abiotically precipitated. Our findings support the idea that nanogranular organization of calcium carbonate fibers is not, per se, evidence of their biogenic versus abiogenic origin or their aragonitic versus calcitic composition but rather, a feature of CaCO3 formed in an aqueous solution in the presence of organic molecules that control nanograin formation. Consistent orientation of crystalographic axes of polycrystalline skeletal fibers in extant or fossil coralla, suggests that nanograins are monocrystalline and crystallographically ordered (at least after deposition).
    [Show full text]
  • Strategies for the Simulation of Sea Ice Organic Chemistry: Arctic Tests and Development
    geosciences Article Strategies for the Simulation of Sea Ice Organic Chemistry: Arctic Tests and Development Scott Elliott 1,*, Nicole Jeffery 1, Elizabeth Hunke 1, Clara Deal 2, Meibing Jin 2 ID , Shanlin Wang 1, Emma Elliott Smith 3 and Samantha Oestreicher 4 1 Climate Ocean Sea Ice Modeling (COSIM), Los Alamos National Laboratory, Los Alamos, NM 87545, USA; [email protected] (N.J.); [email protected] (E.H.); [email protected] (S.W.) 2 International Arctic Research Center and University of Alaska, Fairbanks, AK 99775, USA; [email protected] (C.D.), [email protected] (M.J.) 3 Biology Department, University of New Mexico, Albuquerque, NM 87131, USA; [email protected] 4 Applied Mathematics, University of Minnesota, Minneapolis, MN 55455, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-505-606-0118 Received: 11 April 2017; Accepted: 21 June 2017; Published: 14 July 2017 Abstract: A numerical mechanism connecting ice algal ecodynamics with the buildup of organic macromolecules is tested within modeled pan-Arctic brine channels. The simulations take place offline in a reduced representation of sea ice geochemistry. Physical driver quantities derive from the global sea ice code CICE, including snow cover, thickness and internal temperature. The framework is averaged over ten boreal biogeographic zones. Computed nutrient-light-salt limited algal growth supports grazing, mortality and carbon flow. Vertical transport is diffusive but responds to pore structure. Simulated bottom layer chlorophyll maxima are reasonable, though delayed by about a month relative to observations due to uncertainties in snow variability. Upper level biota arise intermittently during flooding events.
    [Show full text]
  • Biogeochemistry: Historical and Future Perspectives Schulze ED* Was a Surprise to See How Volatile Carbon Is
    Open Access Austin Journal of Earth Science Editorial Biogeochemistry: Historical and Future Perspectives Schulze ED* was a surprise to see how volatile carbon is. The global mean carbon MPI Biogeochemistry, Germany turnover time is only 23 years. This contrasts nature conservation *Corresponding author: Schulze ED, MPI which embraces old trees, or soil science which highlights old carbon Biogeochemistry, POBox 100164, 07749 Jena, Germany in soils. Old trees and old carbon make up only a minute fraction Received: May 22, 2015; Accepted: June 01, 2015; of all trees and all soil carbon. Thus, biogeochemistry has helped Published: June 03, 2015 to quantify simple terms of reference in the element cycles of the earth, even though we lack understanding of the regulation of major processes in organisms. Editorial The carbon cycle has been the primary focus of Biogeochemistry in the past because of the climate forcing by CO2. However, Biogeochemistry is a very recent branch on the “tree” of natural biogeochemistry will remain descriptive without recognition of the th sciences, where chemistry emerged from Alchemy in the 18 century, nitrogen and phosphorous cycle [5-7]. The problem is that these th leading to Geochemistry in the 19 and to Biogeochemistry in the cycles do not directly affect the radiation balance of the globe, but th 20 century [1]. While chemistry deals with the understanding of they are part of global Climate Change controlling the physiological substances, the focus of geochemistry is the earth crust and the cycling activity of the earth surface [8]. of elements. It was the insight of modern times, that most reactions that drive geochemical cycles are regulated by organisms.
    [Show full text]
  • 2. Sediments and Biogeochemistry
    2. Sediments and Biogeochemistry Benthic size classes Properties of marine sediments Sediment biogeochemistry Chemical gradients in sediments Biological mediation Physical flow effects Dr Laura J. Grange ([email protected]) 11th April 2010 Reading: Levinton, Chapter 13, “Life in the Mud and Sand” Benthic Organisms Sizes Nanobenthos (microflora/microfauna) <62µm (shallow-water) <42µm (deep-sea) Meiofauna 62µm – 500µm (shallow-water) 42µm – 300µm (deep-sea) Macrofauna 500µm – 3cm (shallow-water) 300µm – 3cm (deep-water) Megafauna >3cm Large enough to be identified by bottom photos Marine Sediments Actual sizes not as important as recognizing scale Marine Sediments Rarely consist of just one size fraction What factors are important to biology? Surface area How much space available for colonization grain size = available surface area per gram Mayer & Rossi, 1982 Marine Sediments Water Marine sediments are overlain by seawater of varying depth Water penetrates into sediment, bringing with it chemicals, nutrients & O2 Ability of water to penetrate and move is characterized by :- Porosity Measure of space within sediment that can be occupied by water Permeability Measure of ability of water to flow through sediment Marine Sediments Porosity Lowest in sands Highest in silts and clays Permeability Highest is sands Lowest in silts and clays Both factors affect pore water chemistry Diffusion usually slow through sediments Path water takes among sediment grains is long High tortuosity Friedman et al.,
    [Show full text]
  • Atmospheric Deposition and Ocean Biogeochemistry
    SOLAS Core Theme 3: Atmospheric Deposition and Ocean Biogeochemistry Raymond Najjar The Pennsylvania State University OCB Ocean-Atmosphere Interaction: Scoping Directions for U.S Research Workshop September 30 – October 3, 2019 Sterling, VA Increasing trend in N* (nitrate – 16*phosphate) in East Asian coastal waters Kim et al. (2011) Evidence for shift from N limitation to P limitation Kim et al. (2011) Ocean model simulation of iron limitation Mahowald et al. (2018) Ocean model simulation of iron limitation in absence of atmospheric deposition Mahowald et al. (2018) Core Theme 3 questions SOLAS 2015–2025 Science Plan and Organisation How do biogeochemical and ecological processes interact in response to natural and anthropogenic material input from the atmosphere across different regions? How do global warming and other anthropogenic stressors synergistically alter the uptake of atmospheric nutrients and metals by marine biota in different oceanic regions? What are the large-scale impacts of atmospheric deposition to the ocean on global elemental cycles (e.g., C and N) and climate change feedbacks in major marine biomes? 1. Emissions 2. Transport and transformation 3. Deposition 4. Marine biogeochemical response Deposition = Velocity × Concentration Wet deposition Velocity = precipitation rate Concentration = solute concentration Dry deposition Velocity = gas transfer velocity = f(turbulence) (gases) Concentration = gas concentration Dry deposition Velocity = deposition velocity = f(size, turbulence) (particles) Concentration = particle
    [Show full text]
  • Dissolved Organic Matter and Lake Metabolism: Biogeochemistry and Controls of Nutrient Flux Dynamics to Fresh Waters
    / i ;.rcr TECHNICAL PROGRESS REPORT f Grant Title: Dissolved Organic Matter and Lake Metabolism: Biogeochemistry and Controls of Nutrient Flux Dynamics to Fresh Waters Grant Number: DE-FG05-90ER60930 Grant Period: 1 January 1990 - 3 1 December 1991 Principal Investigator: Robert G. Wetzel, Bishop Professor Department of Biological Sciences University of Alabama Tuscaloosa, AL 3 5487-0206 t t Robert G. Wetzel, PIPD DISCLAIMER This report was prepared as an account of work sponsored by an agency of the United States Government. Neither the United States Government nor any agency tbmof. nor any of their employees, make any warranty. express or implied. or assumes any legal liabiiity or responsibility for the accuracy, completeness. or use- fulness of any information, apparatus, product, or ptocess disclosed, or represents that its use would not infringe privatciy owned rights. Reference hmin to any sp- cifrc commercial product, procesj, or haby trade name, trademark, inanufac- turer. or otherwise does not necessarily constitute or imply its endorsement, ncom- mendation, or favoring by the United States Government or any agency thmof. The views and opinions of authors exprrsJcd bcrcin do not nemsarily state or reflect thoK of the United Statu Governmtot or any agency thereof. DISCLAIMER Portions of this document may be illegible in electronic image products. Images are produced from the best available original document. WETLAND INTEFWACE ECOSYSTEM The land-water interface region consists of two major components: the wetland, and the down-gradient
    [Show full text]
  • Modern Biogeochemistry Modern Biogeochemistry
    MODERN BIOGEOCHEMISTRY MODERN BIOGEOCHEMISTRY VLADIMIR N. BASHKIN Moscow State University, Russia In cooperation with Robert W. Howarth, Cornell University, USA KLUWER ACADEMIC PUBLISHERS NEW YORK, BOSTON, DORDRECHT, LONDON, MOSCOW eBook ISBN: 0-306-48103-0 Print ISBN: 1-4020-0992-5 ©2003 Kluwer Academic Publishers New York, Boston, Dordrecht, London, Moscow Print ©2002 Kluwer Academic Publishers Dordrecht All rights reserved No part of this eBook may be reproduced or transmitted in any form or by any means, electronic, mechanical, recording, or otherwise, without written consent from the Publisher Created in the United States of America Visit Kluwer Online at: http://kluweronline.com and Kluwer's eBookstore at: http://ebooks.kluweronline.com TABLE OF CONTENTS Preface vii CHAPTER 1: INTRODUCTION 1 1. The Basic Concepts and Approaches to the Subject 1 2. Historical Development of Biogeochemistry 5 Further Reading 10 Questions and Problems 11 CHAPTER 2: EVOLUTIONARY BIOGEOCHEMISTRY 13 1. Introduction 13 2. Origin of Elements 14 3. Earth Evolution 15 3.1 Evolution of the Lithosphere 15 3.2 Evolution of the Atmosphere 21 3.3 Evolution of the Hydrosphere 27 3.4 Prebiotic Earth and Mineral Cycling 31 4. Origin of Life 35 4.1 When Did Life Originate? 36 4.2 Primordial Soup 38 4.3 Clays and Life 42 4.4 Pyrite-Based Life Origin 43 4.5 The “Thioester World” 47 5. Evolution of Biogeochemical Cycles 50 5.1 Application of Isotopic Analysis for the Geological History of the Biogeochemical Cycles 50 5.2 Evolution of Oxygen Biogeochemical Cycle 53 5.3 Evolution of the Nitrogen Biogeochemical Cycle 54 5.4 Evolution of Carbon and Sulfur Biogeochemical Cycles 56 6.
    [Show full text]
  • The Biophysics, Ecology, and Biogeochemistry Of
    Geosci. Model Dev., 12, 4309–4346, 2019 https://doi.org/10.5194/gmd-12-4309-2019 © Author(s) 2019. This work is distributed under the Creative Commons Attribution 4.0 License. The biophysics, ecology, and biogeochemistry of functionally diverse, vertically and horizontally heterogeneous ecosystems: the Ecosystem Demography model, version 2.2 – Part 1: Model description Marcos Longo1,2,3, Ryan G. Knox4,5, David M. Medvigy6, Naomi M. Levine7, Michael C. Dietze8, Yeonjoo Kim9, Abigail L. S. Swann10, Ke Zhang11, Christine R. Rollinson12, Rafael L. Bras13, Steven C. Wofsy1, and Paul R. Moorcroft1 1Harvard University, Cambridge, MA, USA 2Embrapa Agricultural Informatics, Campinas, SP, Brazil 3Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, USA 4Massachusetts Institute of Technology, Cambridge, MA, USA 5Lawrence Berkeley National Laboratory, Berkeley, CA, USA 6University of Notre Dame, Notre Dame, IN, USA 7University of Southern California, Los Angeles, CA, USA 8Boston University, Boston, MA, USA 9Department of Civil and Environmental Engineering, Yonsei University, Seoul, Korea 10University of Washington, Seattle, WA, USA 11Hohai University, Nanjing, Jiangsu, China 12The Morton Arboretum, Lisle, IL, USA 13Georgia Institute of Technology, Atlanta, GA, USA Correspondence: Marcos Longo ([email protected]) Received: 14 February 2019 – Discussion started: 27 March 2019 Revised: 12 August 2019 – Accepted: 23 August 2019 – Published: 14 October 2019 Abstract. Earth system models (ESMs) have been devel- lent conservation of these quantities in long-term simulation oped to represent the role of terrestrial ecosystems on the (< 0.1 % error over 50 years). We also show examples of ED- energy, water, and carbon cycles. However, many ESMs still 2.2 simulation results at single sites and across tropical South lack representation of within-ecosystem heterogeneity and America.
    [Show full text]