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DNA Barcodes Reveal Deeply Neglected Diversity and Numerous Invasions of Micromoths in Madagascar
Genome DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in Madagascar Journal: Genome Manuscript ID gen-2018-0065.R2 Manuscript Type: Article Date Submitted by the 17-Jul-2018 Author: Complete List of Authors: Lopez-Vaamonde, Carlos; Institut National de la Recherche Agronomique (INRA), ; Institut de Recherche sur la Biologie de l’Insecte (IRBI), Sire, Lucas; Institut de Recherche sur la Biologie de l’Insecte Rasmussen,Draft Bruno; Institut de Recherche sur la Biologie de l’Insecte Rougerie, Rodolphe; Institut Systématique, Evolution, Biodiversité (ISYEB), Wieser, Christian; Landesmuseum für Kärnten Ahamadi, Allaoui; University of Antananarivo, Department Entomology Minet, Joël; Institut de Systematique Evolution Biodiversite deWaard, Jeremy; Biodiversity Institute of Ontario, University of Guelph, Decaëns, Thibaud; Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Montpellier–Université Paul-Valéry Montpellier–EPHE), , CEFE UMR 5175 CNRS Lees, David; Natural History Museum London Keyword: Africa, invasive alien species, Lepidoptera, Malaise trap, plant pests Is the invited manuscript for consideration in a Special 7th International Barcode of Life Issue? : https://mc06.manuscriptcentral.com/genome-pubs Page 1 of 57 Genome 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. -
Fung Yuen SSSI & Butterfly Reserve Moth Survey 2009
Fung Yuen SSSI & Butterfly Reserve Moth Survey 2009 Fauna Conservation Department Kadoorie Farm & Botanic Garden 29 June 2010 Kadoorie Farm and Botanic Garden Publication Series: No 6 Fung Yuen SSSI & Butterfly Reserve moth survey 2009 Fung Yuen SSSI & Butterfly Reserve Moth Survey 2009 Executive Summary The objective of this survey was to generate a moth species list for the Butterfly Reserve and Site of Special Scientific Interest [SSSI] at Fung Yuen, Tai Po, Hong Kong. The survey came about following a request from Tai Po Environmental Association. Recording, using ultraviolet light sources and live traps in four sub-sites, took place on the evenings of 24 April and 16 October 2009. In total, 825 moths representing 352 species were recorded. Of the species recorded, 3 meet IUCN Red List criteria for threatened species in one of the three main categories “Critically Endangered” (one species), “Endangered” (one species) and “Vulnerable” (one species” and a further 13 species meet “Near Threatened” criteria. Twelve of the species recorded are currently only known from Hong Kong, all are within one of the four IUCN threatened or near threatened categories listed. Seven species are recorded from Hong Kong for the first time. The moth assemblages recorded are typical of human disturbed forest, feng shui woods and orchards, with a relatively low Geometridae component, and includes a small number of species normally associated with agriculture and open habitats that were found in the SSSI site. Comparisons showed that each sub-site had a substantially different assemblage of species, thus the site as a whole should retain the mosaic of micro-habitats in order to maintain the high moth species richness observed. -
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
The Microlepidopterous Fauna of Sri Lanka, Formerly Ceylon, Is Famous
ON A COLLECTION OF SOME FAMILIES OF MICRO- LEPIDOPTERA FROM SRI LANKA (CEYLON) by A. DIAKONOFF Rijksmuseum van Natuurlijke Historie, Leiden With 65 text-figures and 18 plates CONTENTS Preface 3 Cochylidae 5 Tortricidae, Olethreutinae, Grapholitini 8 „ „ Eucosmini 23 „ „ Olethreutini 66 „ Chlidanotinae, Chlidanotini 78 „ „ Polyorthini 79 „ „ Hilarographini 81 „ „ Phricanthini 81 „ Tortricinae, Tortricini 83 „ „ Archipini 95 Brachodidae 98 Choreutidae 102 Carposinidae 103 Glyphipterigidae 108 A list of identified species no A list of collecting localities 114 Index of insect names 117 Index of latin plant names 122 PREFACE The microlepidopterous fauna of Sri Lanka, formerly Ceylon, is famous for its richness and variety, due, without doubt, to the diversified biotopes and landscapes of this beautiful island. In spite of this, there does not exist a survey of its fauna — except a single contribution, by Lord Walsingham, in Moore's "Lepidoptera of Ceylon", already almost a hundred years old, and a number of small papers and stray descriptions of new species, in various journals. The authors of these papers were Walker, Zeller, Lord Walsingham and a few other classics — until, starting with 1905, a flood of new descriptions 4 ZOOLOGISCHE VERHANDELINGEN I93 (1982) and records from India and Ceylon appeared, all by the hand of Edward Meyrick. He was almost the single specialist of these faunas, until his death in 1938. To this great Lepidopterist we chiefly owe our knowledge of all groups of Microlepidoptera of Sri Lanka. After his death this information stopped abruptly. In the later years great changes have taken place in the tropical countries. We are now facing, alas, the disastrously quick destruction of natural bio- topes, especially by the reckless liquidation of the tropical forests. -
The Complete Mitochondrial Genome of Spilonota Lechriaspis Meyrick (Lepidoptera: Tortricidae)
Mol Biol Rep (2011) 38:3757–3764 DOI 10.1007/s11033-010-0491-6 The complete mitochondrial genome of Spilonota lechriaspis Meyrick (Lepidoptera: Tortricidae) Jin-Liang Zhao • Yan-Yan Zhang • A-Rong Luo • Guo-Fang Jiang • Stephen L. Cameron • Chao-Dong Zhu Received: 22 July 2010 / Accepted: 9 November 2010 / Published online: 24 November 2010 Ó Springer Science+Business Media B.V. 2010 Abstract We determined the nucleotide sequence of the Introduction mitochondrial genome (mtgenome) of Spilonota lechria- spis Meyrick (Lepidoptera: Tortricidae). The entire closed Complete mitochondrial genome (mtgenome) sequences circular molecule is 15,368 bp and contains 37 genes with are seeing wider use as molecular markers for phyloge- the typical gene complement and order for lepidopteran netic, phylogeographic and ecological studies of insects mtgenomes. All tRNAs except tRNASer(AGN) can be folded [1–5] plus as a model system for genome biology [6–9]. into the typical cloverleaf secondary structures. The pro- Wolstenholme and Clary [10] reported the first insect tein-coding genes (PCGs) have typical mitochondrial start mtgenome sequence in 1985 for Drosophila. Up to 2006, codons, with the exception of COI, which uses the unusual there had been 46 complete or near complete mtgenome CGA one as is found in all other Lepidoptera sequenced to sequences lodged in GenBank [11], and the number has date. In addition, six of 13 PCGs harbor the incomplete rapidly increased in the last five years, with to 198 ones in termination codons, a single T. The A ? T-rich region April, 2010. The mtgenome of insects as with other met- contains some conserved structures that are similar to those azoans is a closed-circular molecule ranging in size found in other lepidopteran mtgenomes, including a from 14 to 20 kb, which encodes 37 genes, consisting structure combining the motif ‘ATAGA’, a 19-bp poly(T) of 13 PCGs, two ribosomal RNA (rRNA) genes, and 22 stretch and three microsatellite (AT)n elements which are transfer RNA (tRNA) genes [12]. -
And Leafflower Trees (Phyllanthaceae: Phyllanthus Sensu Lato [Glochidion]) in Southeastern Polynesia
Coevolutionary Diversification of Leafflower Moths (Lepidoptera: Gracillariidae: Epicephala) and Leafflower Trees (Phyllanthaceae: Phyllanthus sensu lato [Glochidion]) in Southeastern Polynesia By David Howard Hembry A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Environmental Science, Policy, and Management in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Rosemary Gillespie, Chair Professor Bruce Baldwin Professor Patrick O’Grady Spring 2012 1 2 Abstract Coevolution between phylogenetically distant, yet ecologically intimate taxa is widely invoked as a major process generating and organizing biodiversity on earth. Yet for many putatively coevolving clades we lack knowledge both of their evolutionary history of diversification, and the manner in which they organize themselves into patterns of interaction. This is especially true for mutualistic associations, despite the fact that mutualisms have served as models for much coevolutionary research. In this dissertation, I examine the codiversification of an obligate, reciprocally specialized pollination mutualism between leafflower moths (Lepidoptera: Gracillariidae: Epicephala) and leafflower trees (Phyllanthaceae: Phyllanthus sensu lato [Glochidion]) on the oceanic islands of southeastern Polynesia. Leafflower moths are the sole known pollinators of five clades of leafflowers (in the genus Phyllanthus s. l., including the genera Glochidion and Breynia), and thus this interaction is considered to be obligate. Female moths actively transfer pollen from male flowers to female flowers, using a haired proboscis to transfer pollen into the recessed stigmatic surface at the end of the fused stylar column. The moths then oviposit into the flowers’ ovaries, and the larva which hatches consumes a subset, but not all, of the developing fruit’s seed set. -
Varietal Reaction Against the Incidence of Major Pests of Litchi
Journal of Entomology and Zoology Studies 2018; 6(5): 131-133 E-ISSN: 2320-7078 P-ISSN: 2349-6800 Varietal reaction against the incidence of major JEZS 2018; 6(5): 131-133 © 2018 JEZS pests of litchi (Litchi chinensis Sonnerat) Received: 21-07-2018 Accepted: 22-08-2018 Rajeev Ranjan Rajeev Ranjan and Vijay Kumar Department of Entomology Dr. Rajendra Prasad Central Abstract Agricultural University, Pusa, Litchi (Litchi chinensis Sonn.) is attacked by several pests and litchi mite (Aceria litchii Keifer), litchi Samastipur, Bihar, India fruit borer (Conopomorpha cramerella Snellen) and litchi leaf roller (Dudua aprobola Meyrick) as major Vijay Kumar pests of litchi causing substantial damage to litchi foliage and fruits at various stages of growth. Study on Department of Entomology varietal reaction against these pests reveal that litchi cultivar ‘Shahi’ was proved most preferred by the Dr. Rajendra Prasad Central pests recording maximum pest incidence viz; mite (53.10%), fruit borer (49.70) and leaf roller (39.90) Agricultural University, Pusa, followed by cv. ‘Rose Scented’ which recorded 44.30, 36.30 and 36.50 percent infestation, respectively Samastipur, Bihar, India against the pests. Whereas the litchi cultivar ‘Deshi’ and ‘Kasba’ were least preferred for the major pests of litchi recording 22.30 and 25.30 percent mite incidence, 18.20 and 20.70 percent fruit borer incidence and 17.00 and 27.00 percent leaf roller incidence during the years of infestation. The other cultivars ‘China’, ‘Dehrarose’, ‘Mandraji’, and ‘Early Bedana’ were found comparatively more susceptible to the pest incidence in comparison to the litchi cultivars ‘Deshi’ and ‘Kasba’. -
The Lepidoptera Rapa Island
J. F. GATES CLA, The Lepidoptera Rapa Island SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • 1971 NUMBER 56 .-24 f O si % r 17401 •% -390O i 112100) 0 is -•^ i BLAKE*w 1PLATEALP I5 i I >k =(M&2l2Jo SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY NUMBER 56 j. F. Gates Clarke The Lepidoptera of Rapa Island SMITHSONIAN INSTITUTION PRESS CITY OF WASHINGTON 1971 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Insti- tution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge not strictly professional." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. -
Phylogeny of Tortricidae (Lepidoptera): a Morphological Approach with Enhanced Whole
Template B v3.0 (beta): Created by J. Nail 06/2015 Phylogeny of Tortricidae (Lepidoptera): A morphological approach with enhanced whole mount staining techniques By TITLE PAGE Christi M. Jaeger AThesis Submitted to the Faculty of Mississippi State University in Partial Fulfillment of the Requirements for the Degree of Master of Science in Agriculture and Life Sciences (Entomology) in the Department of Biochemistry, Molecular Biology, Entomology, & Plant Pathology Mississippi State, Mississippi August 2017 Copyright by COPYRIGHT PAGE Christi M. Jaeger 2017 Phylogeny of Tortricidae (Lepidoptera): A morphological approach with enhanced whole mount staining techniques By APPROVAL PAGE Christi M. Jaeger Approved: ___________________________________ Richard L. Brown (Major Professor) ___________________________________ Gerald T. Baker (Committee Member) ___________________________________ Diana C. Outlaw (Committee Member) ___________________________________ Jerome Goddard (Committee Member) ___________________________________ Kenneth O. Willeford (Graduate Coordinator) ___________________________________ George M. Hopper Dean College of Agriculture and Life Sciences Name: Christi M. Jaeger ABSTRACT Date of Degree: August 11, 2017 Institution: Mississippi State University Major Field: Agriculture and Life Sciences (Entomology) Major Professor: Dr. Richard L. Brown Title of Study: Phylogeny of Tortricidae (Lepidoptera): A morphological approach with enhanced whole mount staining techniques Pages in Study 117 Candidate for Degree of Master of -
Giovanny Fagua González
Phylogeny, evolution and speciation of Choristoneura and Tortricidae (Lepidoptera) by Giovanny Fagua González A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Systematics and Evolution Department of Biological Sciences University of Alberta © Giovanny Fagua González, 2017 Abstract Leafrollers moths are one of the most ecologically and economically important groups of herbivorous insects. These Lepidoptera are an ideal model for exploring the drivers that modulate the processes of diversification over time. This thesis analyzes the evolution of Choristoneura Lederer, a well known genus because of its pest species, in the general context of the evolution of Tortricidae. It takes an inductive view, starting with analysis of phylogenetic, biogeographic and diversification processes in the family Tortricidae, which gives context for studying these processes in the genus Choristoneura. Tectonic dynamics and niche availability play intertwined roles in determining patterns of diversification; such drivers explain the current distribution of many clades, whereas events like the rise of angiosperms can have more specific impacts, such as on the diversification rates of herbivores. Tortricidae are a diverse group suited for testing the effects of these determinants on the diversification of herbivorous clades. To estimate ancestral areas and diversification patterns in Tortricidae, a complete tribal-level dated tree was inferred using molecular markers and calibrated using fossil constraints. The time-calibrated phylogeny estimated that Tortricidae diverged ca. 120 million years ago (Mya) and diversified ca. 97 Mya, a timeframe synchronous with the rise of angiosperms in the Early-Mid Cretaceous. Ancestral areas analysis supports a Gondwanan origin of Tortricidae in the South American plate. -
EUROPEAN JOURNAL of ENTOMOLOGYENTOMOLOGY ISSN (Online): 1802-8829 Eur
EUROPEAN JOURNAL OF ENTOMOLOGYENTOMOLOGY ISSN (online): 1802-8829 Eur. J. Entomol. 113: 482–488, 2016 http://www.eje.cz doi: 10.14411/eje.2016.063 ORIGINAL ARTICLE The mitochondrial genome of the Mediterranean fl our moth, Ephestia kuehniella (Lepidoptera: Pyralidae), and identifi cation of invading mitochondrial sequences (numts) in the W chromosome KATRIN LÄMMERMANN 1, 3, HEIKO VOGEL 2 and WALTHER TRAUT 3, * 1 Universität zu Lübeck, Institut für Neuro- und Bioinformatik, Ratzeburger Allee 160, D-23538 Lübeck, Germany; e-mail: [email protected] 2 Max Planck Institute for Chemical Ecology, Department of Entomology, Hans-Knoell-Strasse 8, D-07745 Jena, Germany; e-mail: [email protected] 3 Universität zu Lübeck, Zentrum für Medizinische Strukturbiologie, Institut für Biologie, Ratzeburger Allee 160, D-23538 Lübeck, Germany; e-mail: [email protected] Key words. Lepidoptera, Pyralidae, Ephestia kuehniella, mitogenome, Mediterranean fl our moth, phylogeny, numts, W chromosome Abstract. The Mediterranean fl our moth, Ephestia kuehniella is a widespread pest of stored products and a classical object in experimental biology. In the present study, we determined its complete mitochondrial genome sequence. The genome is circular, consists of 15,327 bp and comprises 13 protein-coding, 2 rRNA- and 22 tRNA-coding genes in an order typical for the Ditrysia clade of the order Lepidoptera. A phylogenetic study of the Lepidoptera based on complete mitochondrial genomes places E. kuehniella correctly in the family Pyralidae and supports major lepidopteran taxa as phylogenetic clades. The W chromosome of E. kuehniella is an exceptionally rich reservoir of originally mitochondrial sequences (numts). Around 0.7% of the W DNA was found to be of mitochondrial origin, 83% of the mitogenome sequence was represented between 1–11 × in the W chromosome. -
(Lepidoptera: Gracillariidae: Epicephala) and Leafflower Trees (Phyllanthaceae: Phyllanthus Sensu Lato [Glochidion]) in Southeastern Polynesia
Coevolutionary Diversification of Leafflower Moths (Lepidoptera: Gracillariidae: Epicephala) and Leafflower Trees (Phyllanthaceae: Phyllanthus sensu lato [Glochidion]) in Southeastern Polynesia By David Howard Hembry A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Environmental Science, Policy, and Management in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Rosemary Gillespie, Chair Professor Bruce Baldwin Professor Patrick O’Grady Spring 2012 1 2 Abstract Coevolution between phylogenetically distant, yet ecologically intimate taxa is widely invoked as a major process generating and organizing biodiversity on earth. Yet for many putatively coevolving clades we lack knowledge both of their evolutionary history of diversification, and the manner in which they organize themselves into patterns of interaction. This is especially true for mutualistic associations, despite the fact that mutualisms have served as models for much coevolutionary research. In this dissertation, I examine the codiversification of an obligate, reciprocally specialized pollination mutualism between leafflower moths (Lepidoptera: Gracillariidae: Epicephala) and leafflower trees (Phyllanthaceae: Phyllanthus sensu lato [Glochidion]) on the oceanic islands of southeastern Polynesia. Leafflower moths are the sole known pollinators of five clades of leafflowers (in the genus Phyllanthus s. l., including the genera Glochidion and Breynia), and thus this interaction is considered to be obligate. Female moths actively transfer pollen from male flowers to female flowers, using a haired proboscis to transfer pollen into the recessed stigmatic surface at the end of the fused stylar column. The moths then oviposit into the flowers’ ovaries, and the larva which hatches consumes a subset, but not all, of the developing fruit’s seed set.