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Supplementary Table 4 Li et al. mir-30d in human cancer Table S4. The probe list down-regulated in MDA-MB-231 cells by mir-30d mimic transfection Gene Probe Gene symbol Description Row set 27758 8119801 ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10 15497 8101675 ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 18536 8158725 ABL1 c-abl oncogene 1, receptor tyrosine kinase 21232 8058591 ACADL acyl-Coenzyme A dehydrogenase, long chain 12466 7936028 ACTR1A ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 18102 8056005 ACVR1 activin A receptor, type I 20790 8115490 ADAM19 ADAM metallopeptidase domain 19 (meltrin beta) 15688 7979904 ADAM21 ADAM metallopeptidase domain 21 14937 8054254 AFF3 AF4/FMR2 family, member 3 23560 8121277 AIM1 absent in melanoma 1 20209 7921434 AIM2 absent in melanoma 2 19272 8136336 AKR1B10 aldo-keto reductase family 1, member B10 (aldose reductase) 18013 7954777 ALG10 asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe) 30049 7954789 ALG10B asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast) 28807 7962579 AMIGO2 adhesion molecule with Ig-like domain 2 5576 8112596 ANKRA2 ankyrin repeat, family A (RFXANK-like), 2 23414 7922121 ANKRD36BL1 ankyrin repeat domain 36B-like 1 (pseudogene) 29782 8098246 ANXA10 annexin A10 22609 8030470 AP2A1 adaptor-related protein complex 2, alpha 1 subunit 14426 8107421 AP3S1 adaptor-related protein complex 3, sigma 1 subunit 12042 8099760 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 30227 8059854 ARL4C ADP-ribosylation factor-like 4C 32785 8143766 ARP11 actin-related Arp11 6497 8052125 ASB3 ankyrin repeat and SOCS box-containing 3 24269 8128592 ATG5 ATG5 autophagy related 5 homolog (S. cerevisiae) 25990 8144931 ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 30534 7905754 ATP8B2 ATPase, class I, type 8B, member 2 24790 7987165 AVEN apoptosis, caspase activation inhibitor 5479 8132188 AVL9 AVL9 homolog (S. cerevisiase) 28460 8084206 B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 14183 8066939 B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 1 Li et al. mir-30d in human cancer 15479 8056060 BAZ2B bromodomain adjacent to zinc finger domain, 2B 19143 8091867 BCHE butyrylcholinesterase 16033 7904907 BCL9 B-cell CLL/lymphoma 9 18694 8177229 BCORL2 BCL6 co-repressor-like 2 7959 8145454 BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 13063 7946680 BTBD10 BTB (POZ) domain containing 10 16433 7902965 BTBD8 BTB (POZ) domain containing 8 9582 7976571 C14orf129 chromosome 14 open reading frame 129 7273 7993458 C16orf45 chromosome 16 open reading frame 45 28741 8027018 C19orf50 chromosome 19 open reading frame 50 19318 7921909 C1orf110 chromosome 1 open reading frame 110 33102 7911897 C1orf174 chromosome 1 open reading frame 174 25578 7908178 C1orf26 chromosome 1 open reading frame 26 30177 8079170 C3orf23 chromosome 3 open reading frame 23 13484 8123876 C6orf218 chromosome 6 open reading frame 218 5480 8130988 C6orf35 chromosome 6 open reading frame 35 15397 8130464 C6orf35 chromosome 6 open reading frame 35 8133 8146225 C8orf40 chromosome 8 open reading frame 40 29829 8067495 CABLES2 Cdk5 and Abl enzyme substrate 2 12001 8102415 CAMK2D calcium/calmodulin-dependent protein kinase II delta 26579 7913237 CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 17419 8105077 CARD6 caspase recruitment domain family, member 6 19719 8103922 CASP3 caspase 3, apoptosis-related cysteine peptidase 9770 7996393 CBFB core-binding factor, beta subunit 28208 8089261 CBLB Cas-Br-M (murine) ecotropic retroviral transforming sequence b 25318 7929541 CC2D2B coiled-coil and C2 domain containing 2B 5733 8029050 CCDC97 coiled-coil domain containing 97 25773 8006602 CCL4 chemokine (C-C motif) ligand 4 7828 7968637 CCNA1 cyclin A1 10242 8037298 CD177 CD177 molecule 30905 8030804 CD33 CD33 molecule 4669 8176360 CD99 CD99 molecule 7096 8165794 CD99 CD99 molecule 15031 8016324 CDC27 cell division cycle 27 homolog (S. cerevisiae) 25235 8154153 CDC37L1 cell division cycle 37 homolog (S. cerevisiae)-like 1 2 Li et al. mir-30d in human cancer 24878 8101031 CDKL2 cyclin-dependent kinase-like 2 (CDC2-related kinase) 22324 8002865 CFDP1 craniofacial development protein 1 8431 7908459 CFH complement factor H 12215 8113305 CHD1 chromodomain helicase DNA binding protein 1 11719 8081055 CHMP2B chromatin modifying protein 2B 32202 8012126 CLDN7 claudin 7 22021 8058127 CLK1 CDC-like kinase 1 5521 8077323 CNTN4 contactin 4 28163 7910446 COG2 component of oligomeric golgi complex 2 32793 8049088 COPS7B COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis) 26951 7989628 CSNK1G1 casein kinase 1, gamma 1 26634 7990391 CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1 32090 8067140 CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 23420 8160756 DCAF12 DDB1 and CUL4 associated factor 12 15671 8000028 DCUN1D3 DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) 4684 8149358 DEFB109P1B defensin, beta 109, pseudogene 1B 14191 7968890 DGKZ diacylglycerol kinase, zeta 104kDa 16416 7973433 DHRS2 dehydrogenase/reductase (SDR family) member 2 4450 7971653 DLEU2 deleted in lymphocytic leukemia 2 (non-protein coding) 7032 7934615 DLG5 discs, large homolog 5 (Drosophila) 21814 7910047 DNAH14 dynein, axonemal, heavy chain 14 31048 8158513 DOLPP1 dolichyl pyrophosphate phosphatase 1 9075 8120883 DOPEY1 dopey family member 1 32946 8138977 DPY19L1 dpy-19-like 1 (C. elegans) 29514 8145470 DPYSL2 dihydropyrimidinase-like 2 18234 8020779 DSG2 desmoglein 2 5746 8097692 EDNRA endothelin receptor type A 13494 7911096 EFCAB2 EF-hand calcium binding domain 2 22480 7960365 EFCAB4B EF-hand calcium binding domain 4B 17563 7905918 EFNA3 ephrin-A3 25980 8092523 EHHADH enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase 8791 7921344 ELL2 elongation factor, RNA polymerase II, 2 23261 8113220 ELL2 elongation factor, RNA polymerase II, 2 6131 8139057 ELMO1 engulfment and cell motility 1 8694 8097529 ELMOD2 ELMO/CED-12 domain containing 2 3 Li et al. mir-30d in human cancer 22796 8132369 EPDR1 ependymin related protein 1 (zebrafish) 29483 8128284 EPHA7 EPH receptor A7 21938 8041967 ERLEC1 endoplasmic reticulum lectin 1 28949 8022473 ESCO1 establishment of cohesion 1 homolog 1 (S. cerevisiae) 27916 8014066 EVI2A ecotropic viral integration site 2A 24379 8136293 EXOC4 exocyst complex component 4 17590 8127396 EYS eyes shut homolog (Drosophila) 17848 8168678 FAM133A family with sequence similarity 133, member A 10489 7928354 FAM149B1 family with sequence similarity 149, member B1 24765 8052554 FAM161A family with sequence similarity 161, member A 31694 8081341 FAM172B family with sequence similarity 172, member B pseudogene 15451 7973918 FAM177A1 family with sequence similarity 177, member A1 32076 8120335 FAM83B family with sequence similarity 83, member B 8519 7947138 FANCF Fanconi anemia, complementation group F 31494 8097288 FAT4 FAT tumor suppressor homolog 4 (Drosophila) 10107 8152703 FBXO32 F-box protein 32 23970 8084947 FBXO45 F-box protein 45 19980 8142580 FEZF1 FEZ family zinc finger 1 14209 7965541 FGD6 FYVE, RhoGEF and PH domain containing 6 5919 7920165 FLG filaggrin 29774 7952673 FLJ45950 FLJ45950 protein 27160 7909441 G0S2 G0/G1switch 2 8593 8020903 GALNT1 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1) 13502 8045835 GALNT5 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5) 12225 8098328 GALNT7 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7) 29567 8127158 GCLC glutamate-cysteine ligase, catalytic subunit 13681 8116418 GFPT2 glutamine-fructose-6-phosphate transaminase 2 20797 8121749 GJA1 gap junction protein, alpha 1, 43kDa 28210 7984517 GLCE glucuronic acid epimerase 32945 8109344 GM2A GM2 ganglioside activator 22243 8079950 GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 13369 7946559 GNG10 guanine nucleotide binding protein (G protein), gamma 10 20426 8114787 GNPDA1 glucosamine-6-phosphate deaminase 1 21664 7903753 GSTM2 glutathione S-transferase mu 2 (muscle) 16247 7903742 GSTM4 glutathione S-transferase mu 4 4 Li et al. mir-30d in human cancer 10023 8150103 GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa 12976 8046906 GULP1 GULP, engulfment adaptor PTB domain containing 1 20256 7897441 H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 21540 8152617 HAS2 hyaluronan synthase 2 23850 7929145 HECTD2 HECT domain containing 2 32253 8096385 HERC3 hect domain and RLD 3 14625 7919584 HIST2H2BF histone cluster 2, H2bf 19184 7919606 HIST2H2BF histone cluster 2, H2bf 15574 8129953 HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 18988 8178193 HLA-DRA major histocompatibility complex, class II, DR alpha 17539 8058552 IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 31919 8151447 IL7 interleukin 7 31142 7980970 ITPK1 inositol 1,3,4-triphosphate 5/6 kinase 26710 8143341 JHDM1D jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae) 30068 8076128 JOSD1 Josephin domain containing 1 26753 8119067 KCTD20 potassium channel tetramerisation domain containing 20 14177 7951535 KDELC2 KDEL (Lys-Asp-Glu-Leu) containing 2 17107 7943282 KDM4D lysine (K)-specific demethylase 4D 20449 7923453 KDM5B lysine (K)-specific demethylase 5B 6153 8155487 KGFLP1
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