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Diversity of Root-Knot Nematodes in Moroccan Olive Nurseries And
Aït Hamza et al. BMC Ecol (2017) 17:41 https://doi.org/10.1186/s12898-017-0153-9 BMC Ecology RESEARCH ARTICLE Open Access Diversity of root‑knot nematodes in Moroccan olive nurseries and orchards: does Meloidogyne javanica disperse according to invasion processes? Mohamed Aït Hamza1,2* , Nadine Ali2,3, Johannes Tavoillot2, Odile Fossati‑Gaschignard2, Hassan Boubaker4, Abdelhamid El Mousadik1† and Thierry Mateille2† Abstract Background: Root-knot nematodes (RKN) are major pest of olive tree (Olea europaea ssp. europaea), especially in nurseries and high-density orchards. Soil samples were collected from main olive growing areas of Morocco, to char‑ acterize Meloidogyne species and to discuss the contribution of biotic and abiotic factors in their spatial distribution. Results: RKN were found in 159 soil samples out of 305 from nurseries (52.1% occurrence) and in 11 out of 49 soil samples from orchards (23.2% occurrence). Biochemical and molecular characterisation (PAGE esterase and SCAR) revealed the dominance of M. javanica both in nurseries and orchards with minor presence of M. incognita only in nurseries, and M. arenaria in only one nursery. RKN were distributed on aggregated basis. Frequent presence of M. javanica in orchards might have come from nurseries. In contrast, the detection of M. incognita in nurseries alone sug‑ gests that this species could not reproduce in orchards because of either the competition with other plant-parasitic nematodes or unft local habitats. The impact of environmental variables (climate, habitat origin and physicochemical characteristics of the substrates) on the distribution of Meloidogyne species is also discussed. Conclusion: Olive nurseries in Morocco are not able to guarantee the safety of rooted plants. -
Diversity, Phylogeny, Characterization and Diagnostics of Root-Knot and Lesion Nematodes
Diversity, phylogeny, characterization and diagnostics of root-knot and lesion nematodes Toon Janssen Promotors: Prof. Dr. Wim Bert Prof. Dr. Gerrit Karssen Thesis submitted to obtain the degree of doctor in Sciences, Biology Proefschrift voorgelegd tot het bekomen van de graad van doctor in de Wetenschappen, Biologie 1 Table of contents Acknowledgements Chapter 1: general introduction 1 Organisms under study: plant-parasitic nematodes .................................................... 11 1.1 Pratylenchus: root-lesion nematodes ..................................................................................... 13 1.2 Meloidogyne: root-knot nematodes ....................................................................................... 15 2 Economic importance ..................................................................................................... 17 3 Identification of plant-parasitic nematodes .................................................................. 19 4 Variability in reproduction strategies and genome evolution ..................................... 22 5 Aims .................................................................................................................................. 24 6 Outline of this study ........................................................................................................ 25 Chapter 2: Mitochondrial coding genome analysis of tropical root-knot nematodes (Meloidogyne) supports haplotype based diagnostics and reveals evidence of recent reticulate evolution. 1 Abstract -
Transcriptome Profiling of the Root-Knot Nematode Meloidogyne Enterolobii During Parasitism and Identification of Novel Effector Proteins
Ecole Doctorale de Sciences de la Vie et de la Santé Unité de recherche : UMR ISA INRA 1355-UNS-CNRS 7254 Thèse de doctorat Présentée en vue de l’obtention du grade de docteur en Biologie Moléculaire et Cellulaire de L’UNIVERSITE COTE D’AZUR par NGUYEN Chinh Nghia Etude de la régulation du transcriptome de nématodes parasites de plante, les nématodes à galles du genre Meloidogyne Dirigée par Dr. Bruno FAVERY Soutenance le 8 Décembre, 2016 Devant le jury composé de : Pr. Pierre FRENDO Professeur, INRA UNS CNRS Sophia-Antipolis Président Dr. Marc-Henri LEBRUN Directeur de Recherche, INRA AgroParis Tech Grignon Rapporteur Dr. Nemo PEETERS Directeur de Recherche, CNRS-INRA Castanet Tolosan Rapporteur Dr. Stéphane JOUANNIC Chargé de Recherche, IRD Montpellier Examinateur Dr. Bruno FAVERY Directeur de Recherche, UNS CNRS Sophia-Antipolis Directeur de thèse Doctoral School of Life and Health Sciences Research Unity: UMR ISA INRA 1355-UNS-CNRS 7254 PhD thesis Presented and defensed to obtain Doctor degree in Molecular and Cellular Biology from COTE D’AZUR UNIVERITY by NGUYEN Chinh Nghia Comprehensive Transcriptome Profiling of Root-knot Nematodes during Plant Infection and Characterisation of Species Specific Trait PhD directed by Dr Bruno FAVERY Defense on December 8th 2016 Jury composition : Pr. Pierre FRENDO Professeur, INRA UNS CNRS Sophia-Antipolis President Dr. Marc-Henri LEBRUN Directeur de Recherche, INRA AgroParis Tech Grignon Reporter Dr. Nemo PEETERS Directeur de Recherche, CNRS-INRA Castanet Tolosan Reporter Dr. Stéphane JOUANNIC Chargé de Recherche, IRD Montpellier Examinator Dr. Bruno FAVERY Directeur de Recherche, UNS CNRS Sophia-Antipolis PhD Director Résumé Les nématodes à galles du genre Meloidogyne spp. -
Morphological and Molecular Characterization of <I>Meloidogyne
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Papers in Plant Pathology Plant Pathology Department 2004 Morphological and Molecular Characterization of Meloidogyne mayaguensis Isolates from Florida J. Brito Florida Department of Agriculture and Consumer Services Thomas O. Powers University of Nebraska-Lincoln, [email protected] P. G. Mullin University of Nebraska-Lincoln Florida Department of Agriculture and Consumer Services N. Florida Department of Agriculture and Consumer Services D. W. Dickson University of Florida Follow this and additional works at: https://digitalcommons.unl.edu/plantpathpapers Part of the Plant Pathology Commons Brito, J.; Powers, Thomas O.; Mullin, P. G.; Florida Department of Agriculture and Consumer Services N.; and Dickson, D. W., "Morphological and Molecular Characterization of Meloidogyne mayaguensis Isolates from Florida" (2004). Papers in Plant Pathology. 242. https://digitalcommons.unl.edu/plantpathpapers/242 This Article is brought to you for free and open access by the Plant Pathology Department at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Papers in Plant Pathology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Journal of Nematology 36(3):232–240. 2004. © The Society of Nematologists 2004. Morphological and Molecular Characterization of Meloidogyne mayaguensis Isolates from Florida1 J. Brito,2 T. O. Powers,3 P. G. Mullin,4 R. N. Inserra,2 and D. W. Dickson5 Abstract: The discovery of Meloidogyne mayaguensis is confirmed in Florida; this is the first report for the continental United States. Meloidogyne mayaguensis is a virulent species that can reproduce on host cultivars bred for nematode resistance. The perineal patterns of M. mayaguensis isolates from Florida show morphological variability and often are similar to M. -
1.2 Root Knot Nematodes
Biological control of root knot nematodes in organic vegetable and flower greenhouse cultivation bioKennis Biological control of root knot nematodes in organic vegetable and flower greenhouse cultivation State of Science Report of a study over the period 2005 - 2010 A.W.G. van der Wurff1, J. Janse1, C.J. Kok2, F.C. Zoon2 1 Wageningen UR Greenhouse Horticulture, Bleiswijk 2 Plant Research International, Wageningen Wageningen UR Greenhouse Horticulture, Bleiswijk September 2010 Report 321 (English version) © 2010 Wageningen, DLO Foundation All rights reserved. No part of this publication may be reproduced, stored in a retrieval system or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, without the prior written permission of the DLO Foundation. For further information please contact: DLO, more specifically the Wageningen UR Greenhouse Horticulture research institute. DLO is not liable for any harmful effects that may arise from use of the data in this publication. This research has been carried out in the context of the LNV (Netherlands Ministry of Agriculture, Nature and Food Quality) framework programmes System Innovation Protected Organic Farming BO-04-005 and BO-04-012 and BO- 06-003 Innovation and Improvement Management of Closed Cultivations. Financed by the Netherlands Ministry of Agriculture, Nature and Food Quality Most research on organic agriculture and food in the Netherlands takes place in the scope of the cluster Organic Farming, mainly financed by the Ministry of Agriculture, Nature and Food Quality. Bioconnect, the knowledge network for organic agriculture and food, is directing the research programmes (www.bioconnect.nl). Wageningen University and Research Centre and Louis Bolk Institute carry out most of the research activities. -
Nematode Control Alternatives
Nematodes: ATTRA Alternative Controls A Publication of ATTRA - National Sustainable Agriculture Information Service • 1-800-346-9140 • www.attra.ncat.org By Martin Guerena This publication provides general information on the tiny worm-like organisms called nematodes. It NCAT Agriculture contains detailed descriptions of the genera of nematodes that attack plants, as well as various methods Specialist to diagnose, discourage, and manage plant parasitic nematodes in a least toxic, sustainable manner. © 2006 NCAT Contents Introduction Introduction ..................... 1 ematodes are Symptoms and tiny, worm-like, Sampling .......................... 4 Nmulticellular Preventing Further animals adapted to liv- Spread of Nematodes ....................... 4 ing in water. The num- ber of nematode species Managing Soil Biology ............................... 5 is estimated at half a Crop Rotations and mil lion, many of which Cover Crops ...................... 6 are “free-living” types Botanical found in the oceans, Nematicides ..................... 9 in freshwater habitats, Biocontrols ...................... 10 and in soils. Plant-par- Plant Resistance ............11 asitic species form a Red Plastic Mulch ......... 12 smaller group. Nema- www.insectimages.org Solarization .................... 13 todes are common Flooding .......................... 13 in soils all over the Root-knot nematode—Meloidogyne brevicauda Loos Summary ......................... 13 world (Dropkin, 1980; ©Jonathan D. Eisenback, Virginia Polytechnic Institute and State University References ..................... 14 Yepsen, 1984). As a commentator in the early Further Resources ........17 twentieth cen tury wrote: genera and species have particu lar soil and Web Resources ..............17 climatic requirements. For example, cer- Suppliers .......................... 18 If all the matter in the universe except the tain species do best in sandy soils, while nematodes were swept away, our world would oth ers favor clay soils. -
Diagnostic Methods for Identification of Root-Knot Nematodes Species from Brazil
Ciência Rural, Santa Maria,Diagnostic v.48: methods 02, e20170449, for identification 2018 of root-knot nematodes specieshttp://dx.doi.org/10.1590/0103-8478cr20170449 from Brazil. 1 ISSNe 1678-4596 CROP PROTECTION Diagnostic methods for identification of root-knot nematodes species from Brazil Tiago Garcia da Cunha1 Liliane Evangelista Visôtto2* Everaldo Antônio Lopes1 Claúdio Marcelo Gonçalves Oliveira3 Pedro Ivo Vieira Good God1 1Instituto de Ciências Agrárias, Universidade Federal de Viçosa (UFV), Campus Rio Paranaíba, Rio Paranaíba, MG, Brasil. 2Instituto de Ciências Biológicas e da Saúde, Universidade Federal de Viçosa (UFV), Campus Rio Paranaíba, 38810-000, Rio Paranaíba, MG, Brasil. E-mail: [email protected]. *Corresponding author. 3Instituto Biológico, Campinas, SP, Brasil. ABSTRACT: The accurate identification of root-knot nematode (RKN) species (Meloidogyne spp.) is essential for implementing management strategies. Methods based on the morphology of adults, isozymes phenotypes and DNA analysis can be used for the diagnosis of RKN. Traditionally, RKN species are identified by the analysis of the perineal patterns and esterase phenotypes. For both procedures, mature females are required. Over the last few decades, accurate and rapid molecular techniques have been validated for RKN diagnosis, including eggs, juveniles and adults as DNA sources. Here, we emphasized the methods used for diagnosis of RKN, including emerging molecular techniques, focusing on the major species reported in Brazil. Key words: DNA, esterase, Meloidogyne, molecular biology, morphological pattern. Métodos diagnósticos usados na identificação de espécies do nematoide das galhas do Brasil RESUMO: A identificação acurada de espécies do nematoide das galhas (NG) (Meloidogyne spp.) é essencial para a implementação de estratégias de manejo. -
Diversity of Root-Knot Nematodes in Moroccan Olive Nurseries and Orchards
Aït Hamza et al. BMC Ecol (2017) 17:41 https://doi.org/10.1186/s12898-017-0153-9 BMC Ecology RESEARCH ARTICLE Open Access Diversity of root‑knot nematodes in Moroccan olive nurseries and orchards: does Meloidogyne javanica disperse according to invasion processes? Mohamed Aït Hamza1,2* , Nadine Ali2,3, Johannes Tavoillot2, Odile Fossati‑Gaschignard2, Hassan Boubaker4, Abdelhamid El Mousadik1† and Thierry Mateille2† Abstract Background: Root-knot nematodes (RKN) are major pest of olive tree (Olea europaea ssp. europaea), especially in nurseries and high-density orchards. Soil samples were collected from main olive growing areas of Morocco, to char‑ acterize Meloidogyne species and to discuss the contribution of biotic and abiotic factors in their spatial distribution. Results: RKN were found in 159 soil samples out of 305 from nurseries (52.1% occurrence) and in 11 out of 49 soil samples from orchards (23.2% occurrence). Biochemical and molecular characterisation (PAGE esterase and SCAR) revealed the dominance of M. javanica both in nurseries and orchards with minor presence of M. incognita only in nurseries, and M. arenaria in only one nursery. RKN were distributed on aggregated basis. Frequent presence of M. javanica in orchards might have come from nurseries. In contrast, the detection of M. incognita in nurseries alone sug‑ gests that this species could not reproduce in orchards because of either the competition with other plant-parasitic nematodes or unft local habitats. The impact of environmental variables (climate, habitat origin and physicochemical characteristics of the substrates) on the distribution of Meloidogyne species is also discussed. Conclusion: Olive nurseries in Morocco are not able to guarantee the safety of rooted plants. -
Response of Eggplant Genotypes to Avirulent and Virulent
Türk. entomol. derg., 2019, 43 (3): 287-300 ISSN 1010-6960 DOI: http://dx.doi.org/10.16970/entoted.562208 E-ISSN 2536-491X Original article (Orijinal araştırma) Response of eggplant genotypes to avirulent and virulent populations of Meloidogyne incognita (Kofoid & White, 1919) Chitwood, 1949 (Tylenchida: Meloidogynidae)1 Melodidogyne incognita (Kofoid & White, 1919) Chitwood, 1949 (Tylenchida: Meloidogynidae)’nın virülent ve avirülent popülasyonlarına patlıcan genotiplerinin tepkisi Serap ÖÇAL2 Zübeyir DEVRAN2* Abstract Eggplant is widely grown throughout the world. HoweVer, some eggplant genotypes are susceptible to Meloidogyne spp., so Solanum torvum (Sw.) is commonly used as a resistant rootstock for root-knot nematodes. Further investigations of resistant sources to root-knot nematodes are still necessary for breeding programs. In this study, a total of 60 eggplant genotypes, including wild sources, wild rootstocks, wild × wild eggplant rootstocks, wild × cultivated eggplant rootstocks, cultivated eggplant rootstocks, pure lines, standard commercial cultivars and commercial hybrids, were tested with avirulent S6 and Mi-1 virulent V14 populations of Meloidogyne incognita (Kofoid & White, 1919) Chitwood, 1949 (Tylenchida: Meloidogynidae) under controlled conditions. The study was conducted in 2016-2017. The seedlings were inoculated with 1000 second-stage juVeniles of M. incognita. Plants were uprooted 8 weeks after nematode inoculation, and the numbers of egg masses and galls on the roots and juveniles in the soil of pots were counted. Solanum torvum (Y28) was found to be resistant to S6 and V14 populations of M. incognita. The remaining genotypes were susceptible to both populations. These results could be used for breeding and management purposes for the control of root-knot nematode. -
For Controlling the Root-Knot Nematode, Meloidogyne Incognita (Tylenchida: Heteroderidae) Si-Hua Yang1,2, Dan Wang1,2, Chun Chen1, Chun-Ling Xu1 & Hui Xie1*
www.nature.com/scientificreports There are amendments to this paper OPEN Evaluation of Stratiolaelaps scimitus (Acari: Laelapidae) for controlling the root-knot nematode, Meloidogyne incognita (Tylenchida: Heteroderidae) Si-Hua Yang1,2, Dan Wang1,2, Chun Chen1, Chun-Ling Xu1 & Hui Xie1* Root-knot nematodes are one of the most harmful plant-parasitic nematodes (PPNs). In this paper, the predation of Stratiolaelaps scimitus against Meloidogyne incognita was tested in an individual arena, and the control efciency of the mite on the nematode in the water spinach (Ipomoea aquatica) rhizosphere was studied with a pot experiment. The results showed that S. scimitus could develop normally and complete its life cycle by feeding on second-stage juveniles of M. incognita (Mi-J2). The consumption rate of a 24 h starving female mite on Mi-J2 increased with the increase of prey density at 25 °C. Among the starvation treatments, the nematode consumption rate of a female mite starved for 96 h at 25 °C was highest; and among temperature treatments, the maximum consumption rate of a 24 h starving female mite on Mi-J2 was at 28 °C. The number of M. incognita in the spinach rhizosphere could be reduced efectively by releasing S. scimitus into rhizosphere soil, and 400 mites per pot was the optimum releasing density in which the numbers of root knots and egg masses decreased by 50.9% and 62.8%, respectively. Though we have gained a greater understanding of S. scimitus as a predator of M. incognita, the biocontrol of M. incognita using S. scimitus under feld conditions remains unknown and requires further study. -
Morphological Comparison of Second-Stage Juveniles of Six Populations of Meloidogyne Hapla by SEM~
Peroxidases h'om MeIoidogyne spp.: Starr 5 In: The Worthington Manual, Worthington 6. HUSSEY. R. S., and J. N. SASSER. 1973. Biochemical Corp., Freehold, New Jersey. Peroxidase from Meloidogyne incognita. 2. ttI3AN(;, C. W,, L. H. I,IN, and S. P. HUAN(;. Pltysiol, Plant I'athol. 3:223-229. 1971. Alteratimls in peroxidase activity in- 7. LOWRY, O. H., N. J. ROSENBROUGH, A. L. tliiced bv root-klu)t llelnatodes on tomato. FARR, and R. J. RANDALL. 1951. Protein Bot. Buli. Academia Sinica XII:74-83. measuremellt with the Folin phenol reagent. 3. HUAN(;, C. W., L. H. LIN, and S. P. HUANG. J. Biol, Chem. 193:265-275. 1971. Changes in peroxidase isoenzymes in 8. STARR, J. L. 1977. A micro-polyacrylamide gel tomato galls induced by Meloidogyne incog- electrophoresis system for analysis of nema- nita. Nematologica 17:460-466. tode enzymes. J. Nematol. 9:284-285 (Abstr.). 4. I-[tlSSEY, R. S. 1971. A technique for obtaining 9. STARR, J. L. 1977. Peroxidase activity in dif- quantities of living Meloidogyne females. J. ferent developmental stages of Meloidogyne Nematol. 3:99-100. spp. J. Nematol. 9:285 (Abslr.). 5. HUSSEY, R. S., J. N. SASSER, and 10, VRAIN, T. C, 1977. A technique for the collec- D. HU1SINGH. 1972. Disc-electrophoretic tion of larvae of Meloidogyne spp. and a studies of soluble proteins and enzymes of comparison of eggs and larvae as inocula. J. Meloidogyne incognita and M. arenaria. J. Nematol. 9:249-251. Nematol. 4:183-189. Morphological Comparison of Second-Stage Juveniles of Six Populations of Meloidogyne hapla by SEM~ J. -
1 Meloidogyne Species - a Diverse Group of Novel and Important Plant Parasites
1 Meloidogyne Species - a Diverse Group of Novel and Important Plant Parasites Maurice Moens1, Roland N. Perry2 and James L. Starr3 1 Institute for Agricultural and Fisheries Research, Merelbeke, Belgium and Ghent University, Ghent, Belgium; 2 Rothamsted Research, Harpenden, Hertfordshire, UK and Ghent University, Ghent, Belgium; 3 Texas A&M University, College Station, Texas, USA 1.1 Introduction I 1.2 Impact 2 1.3 History of the Genus 2 1.4 Current Trends in Species Identification 2 1.5 Life Cycle 3 1.6 Diversity in Biology 6 1.7 Major and Emerging Species 8 1.8 Interactions with Other Plant Pathogens 11 1.9 Management and Control 11 1.10 Conclusions and Future Directions 12 1.11 References 13 1.1 Introduction out showing external symptoms on the harvested products, e.g. symptomless potato tubers. The Root-knot nematodes are members or the genus rapid rate of developmem and reproduction on Meloidogyne (Gbldi, 1892), Meloidogyne is of Greek good hosts results, in the majority or species, in origin and means 'apple-shaped female'. They are several generations during one cropping season, an economically important polyphagous group or leading to severe crop damage. Damage may highly adapted obligate plant parasites, are dis• consist of various degrees of stunting, lack or vig• tributed worldwide and parasitize ncarly every our, and wilting under moisture stress. Secondary species of higher plant. Typically thcy reproduce infection by other pathogens often results in and feed on modified living plant cells within extensive decay of nematode-inlected tissues. The plant roots, where they induce small to large galls common explanation for these above-ground or root-knots, hence their vernacular name.