Climate Change: the Cascade Effect Final Appendices
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Experimental Study of the Zooplankton Impact on the Trophic Structure of Phytoplankton and the Microbial Assemblages in a Temper
ARTICLE IN PRESS Limnologica 37 (2007) 88–99 www.elsevier.de/limno Experimental study of the zooplankton impact on the trophic structure of phytoplankton and the microbial assemblages in a temperate wetland (Argentina) Rodrigo Sinistroa,Ã, Marı´ a Laura Sa´ ncheza, Marı´ a Cristina Marinoneb, Irina Izaguirrea,c aDepartamento de Ecologı´a, Gene´tica y Evolucio´n, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, C1428EHA Buenos Aires, Argentina bDepartamento de Biodiversidad y Biologı´a Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, C1428EHA Buenos Aires, Argentina cConsejo Nacional de Investigaciones Cientı´ficas y Te´cnicas (CONICET), Argentina Received 7 July 2006; received in revised form 23 August 2006; accepted 1 September 2006 Abstract An experimental study using mesocosms was conducted in the main shallow lake of a temperate wetland (Otamendi Natural Reserve, Argentina) to analyse the impact of zooplankton on phytoplankton and the microbial assemblages. The lake is characterised by the presence of a fluctuating cover of floating macrophytes, whose shading effects shape the phytoplakton community and the ecosystem functioning, which was absent during the study period. The experiment was run in situ using polyethylene bags, comparing treatments with and without zooplankton. The cascade effect of zooplankton on phytoplankton and the lower levels of the microbial food web (ciliates, heterotrophic nanoflagellates (HNF) and picoplankton) were analysed. A significant zooplankton grazing on the nano-phytoplankton fraction (3–30 mm) was observed. Conversely, large algae (filamentous cyanobacteria, colonial chlorophytes and large diatoms) increased in all mesocosms until day 10, suggesting that they were not actively grazed by zooplankton during this period. -
CHARACTERIZATION, EPIGENETIC DRUG EFFECT, and GENE DELIVERY to BREAST CANCER CELLS a Dissertation Presented to the Graduate Facu
CHARACTERIZATION, EPIGENETIC DRUG EFFECT, AND GENE DELIVERY TO BREAST CANCER CELLS A Dissertation Presented to The Graduate Faculty of The University of Akron In Partial Fulfillment of Requirements for the Degree Doctor of Philosophy Shan Lu December, 2015 CHARACTERIZATION, EPIGENETIC DRUG EFFECT, AND GENE DELIVERY TO BREAST CANCER CELLS Shan Lu Dissertation Approved: Accepted: Advisor Department Chair Dr. Vinod Labhasetwar Dr. Stephen Weeks Committee Chair Dean of the College Dr. Coleen Pugh Dr. John Green Committee Member Dean of Graduate School Dr. Abraham Joy Dr. Chand Midha Committee Member Dr. Ali Dhinojwala Committee Member Dr. Anand Ramamurthi Committee Member Dr. Peter Niewiarowski ii ABSTRACT Cancer relapse is strongly associated with the presence of cancer stem cells (CSCs), which drive the development of metastasis and drug resistance. In human breast cancer, CSCs are identified by the CD44+/CD24- phenotype and characterized by drug resistance, high tumorigenicity and metastatic potential. In this study, I found that MCF-7/Adr cells that are breast cancer cells resistant to doxorubicin (Dox) uniformly displayed CSC surface markers, possessed CSC proteins, formed in vitro mammospheres, yet retained low migratory rate. They were also able to self-renew and differentiate under floating culture condition and are responsive to epigenetic drug treatment. High degree of DNA methylation (modifications of the cytosine residues of DNA) and histone deacetylation are major epigenetic landmarks of CSCs. In this work, I showed that MCF-7/Adr cells are sensitive to histone deacetylation inhibitor suberoylanilide hydroxamic acid (SAHA). Through RNA-sequencing technology, I also found that decitabine (DAC) and SAHA similarly affected a large number of the examined pathways, including drug and nanoparticle cellular uptake and transport, lipid metabolism, carcinogenesis and nuclear transport pathways. -
Ecological Cascades Emanating from Earthworm Invasions
502 REVIEWS Side- swiped: ecological cascades emanating from earthworm invasions Lee E Frelich1*, Bernd Blossey2, Erin K Cameron3,4, Andrea Dávalos2,5, Nico Eisenhauer6,7, Timothy Fahey2, Olga Ferlian6,7, Peter M Groffman8,9, Evan Larson10, Scott R Loss11, John C Maerz12, Victoria Nuzzo13, Kyungsoo Yoo14, and Peter B Reich1,15 Non- native, invasive earthworms are altering soils throughout the world. Ecological cascades emanating from these invasions stem from rapid consumption of leaf litter by earthworms. This occurs at a midpoint in the trophic pyramid, unlike the more familiar bottom- up or top- down cascades. These cascades cause fundamental changes (“microcascade effects”) in soil morphol- ogy, bulk density, and nutrient leaching, and a shift to warmer, drier soil surfaces with a loss of leaf litter. In North American temperate and boreal forests, microcascade effects can affect carbon sequestration, disturbance regimes, soil and water quality, forest productivity, plant communities, and wildlife habitat, and can facilitate other invasive species. These broader- scale changes (“macrocascade effects”) are of greater concern to society. Interactions among these fundamental changes and broader-scale effects create “cascade complexes” that interact with climate change and other environmental processes. The diversity of cascade effects, combined with the vast area invaded by earthworms, leads to regionally important changes in ecological functioning. Front Ecol Environ 2019; 17(9): 502–510, doi:10.1002/fee.2099 lthough society usually -
LA Native White Paper2
ATTACHMENT 1 LA Native An ecofriendly future for light rail stations www.lanative.org Our goal is simple: get the MTA and Expo Authority to use native species for the station landscaping in phase two of the Expo light rail line. The stations for phase two of the Expo Line present a perfect opportunity to create multiple pockets of native landscaping that will reduce water and fertilizer use; create vital islands of native habitat for birds, butterflies, and other species; and serve as public educational showcases of our native plant varieties, encouraging our citizenry to make better, sustainable choices for landscaping. We were stunned to discover that essentially no native plants were used in phase one of the Expo Line construction. The Theodore Payne Foundation (an LA Native member), provides some startling facts: 1) California uses 20% of its energy consumption to move and treat water. 2) Up to 70% of residential water goes to watering landscaping in our county—landscaping we've filled with non-native tropicals and invasive species that consume on average seven times more than our native plants. 3) Unlike the indigenous plants that evolved in our nitrogen-poor soil, non-natives need fertilizers. The abundant use of such fertilizers has become a huge source of runoff pollution in Santa Monica Bay. 4) Landscaping with native plants does not cost more, and in some cases reduces maintenance costs. 5) We've lost 90% of our native songbird and butterfly populations in the last fifty years. This is no coincidence. A primary food source for most of these bird species is butterfly caterpillars. -
Reef Fisheries and Underwater Surveys Indicate Overfishing of a Brazilian Coastal Island
Research Letters Natureza & Conservação 8(2):151-159, December 2010 Copyright© 2010 ABECO Handling Editor: Sergio R. Floeter Brazilian Journal of Nature Conservation doi: 10.4322/natcon.00802008 Reef Fisheries and Underwater Surveys Indicate Overfishing of a Brazilian Coastal Island Hudson Tercio Pinheiro*, Jean-Christophe Joyeux & Agnaldo Silva Martins Departamento de Oceanografia e Ecologia, Universidade Federal do Espírito Santo, Vitória, ES, Brasil Abstract The preoccupation about fishing effects on marine ecosystems has increased sharply over the last three decades. However, little is known about the impact of multi-gear artisanal and recreational fisheries on the structure of local reef fish communities in Brazil. Fishing activities around a Brazilian coastal island were monitored while reef fish density was censused during underwater surveys (UVC). The links between frequency of capture, intensity at which species are wished and UVC density were explored. Species were classified according to their frequency of capture as regular, occasional and rare, and classified according to the intensity at which they are wished (based on size and price), as highly targeted, average and non-targeted species. Ninety-seven species were caught by fishing, the majority of them being either rarely caught or non-targeted. Nineteen species were highly targeted but rarely caught. The highly targeted species showed extremely low density in the UVC. These results put in question the sustainability of the local fishing activities. The predominance of non-targeted species in the catches and in the reefs environment studied supports the expectation that these species will be more and more captured, thus collaborating to further change the structure of the reef community. -
Cascading Ecological Effects of Eliminating Fishery Discards
ARTICLE Received 19 Nov 2013 | Accepted 15 Apr 2014 | Published 13 May 2014 DOI: 10.1038/ncomms4893 OPEN Cascading ecological effects of eliminating fishery discards Michael R. Heath1, Robin M. Cook1, Angus I. Cameron1, David J. Morris1 & Douglas C. Speirs1 Discarding by fisheries is perceived as contrary to responsible harvesting. Legislation seeking to end the practice is being introduced in many jurisdictions. However, discarded fish are food for a range of scavenging species; so, ending discarding may have ecological consequences. Here we investigate the sensitivity of ecological effects to discarding policies using an ecosystem model of the North Sea—a region where 30–40% of trawled fish catch is currently discarded. We show that landing the entire catch while fishing as usual has conservation penalties for seabirds, marine mammals and seabed fauna, and no benefit to fish stocks. However, combining landing obligations with changes in fishing practices to limit the capture of unwanted fish results in trophic cascades that can benefit birds, mammals and most fish stocks. Our results highlight the importance of considering the broader ecosystem consequences of fishery management policy, since species interactions may dissipate or negate intended benefits. 1 Department of Mathematics and Statistics, University of Strathclyde, Livingstone Tower, 26 Richmond Street, Glasgow G1 1XH, UK. Correspondence and requests for materials should be addressed to M.R.H. (email: [email protected]). NATURE COMMUNICATIONS | 5:3893 | DOI: 10.1038/ncomms4893 | www.nature.com/naturecommunications 1 & 2014 Macmillan Publishers Limited. All rights reserved. ARTICLE NATURE COMMUNICATIONS | DOI: 10.1038/ncomms4893 ood subsidies to wildlife as a result of human activity are nitrogen mass in groups of functionally similar taxa and recognized as having an important effect on terrestrial and materials31 rather than as individual species32, but spans the Faquatic ecosystems1. -
Food Web Interactions Determine Energy Transfer Efficiency and Top Consumer Responses to Inputs of Dissolved Organic Carbon
Hydrobiologia (2018) 805:131–146 DOI 10.1007/s10750-017-3298-9 PRIMARY RESEARCH PAPER Food web interactions determine energy transfer efficiency and top consumer responses to inputs of dissolved organic carbon R. Degerman . R. Lefe´bure . P. Bystro¨m . U. Ba˚mstedt . S. Larsson . A. Andersson Received: 1 July 2016 / Revised: 15 June 2017 / Accepted: 23 June 2017 / Published online: 15 July 2017 Ó The Author(s) 2017. This article is an open access publication Abstract Climate change projections indicate conclude that the added DOC either acted as a subsidy increased precipitation in northern Europe, leading by increasing the production of the top trophic level to increased inflow of allochthonous organic matter to (mesozooplankton), or as a sink causing decreased top aquatic systems. The food web responses are poorly consumer production (planktivorous fish). known, and may differ depending on the trophic structure. We performed an experimental mesocosm Keywords Food web efficiency Á Carbon transfer Á study where effects of labile dissolved organic carbon Allochthonous dissolved organic carbon Á Mesocosm Á (DOC) on two different pelagic food webs were Planktivorous fish investigated, one having zooplankton as highest trophic level and the other with planktivorous fish as top consumer. In both food webs, DOC caused higher bacterial production and lower food web efficiency, Introduction i.e., energy transfer efficiency from the base to the top of the food web. However, the top-level response to Knowledge about pathways and constraints of energy DOC addition differed in the zooplankton and the fish transfer through food webs is fundamental for the systems. The zooplankton production increased due to understanding of ecosystem function (e.g., Dickman efficient channeling of energy via both the bacterial et al., 2008; Wollrab et al., 2012). -
Rainfall As a Trigger of Ecological Cascade Effects in an Australian Groundwater Ecosystem
www.nature.com/scientificreports OPEN Rainfall as a trigger of ecological cascade efects in an Australian groundwater ecosystem Mattia Saccò1,2*, Alison J. Blyth1,3, William F. Humphreys4,5, Steven J. B. Cooper6,7, Nicole E. White2, Matthew Campbell1, Mahsa Mousavi‑Derazmahalleh2, Quan Hua8, Debashish Mazumder8, Colin Smith9,10, Christian Griebler11 & Kliti Grice1 Groundwaters host vital resources playing a key role in the near future. Subterranean fauna and microbes are crucial in regulating organic cycles in environments characterized by low energy and scarce carbon availability. However, our knowledge about the functioning of groundwater ecosystems is limited, despite being increasingly exposed to anthropic impacts and climate change‑ related processes. In this work we apply novel biochemical and genetic techniques to investigate the ecological dynamics of an Australian calcrete under two contrasting rainfall periods (LR—low rainfall and HR—high rainfall). Our results indicate that the microbial gut community of copepods and amphipods experienced a shift in taxonomic diversity and predicted organic functional metabolic pathways during HR. The HR regime triggered a cascade efect driven by microbes (OM processors) and exploited by copepods and amphipods (primary and secondary consumers), which was fnally transferred to the aquatic beetles (top predators). Our fndings highlight that rainfall triggers ecological shifts towards more deterministic dynamics, revealing a complex web of interactions in seemingly simple environmental settings. Here we show how a combined isotopic‑molecular approach can untangle the mechanisms shaping a calcrete community. This design will help manage and preserve one of the most vital but underrated ecosystems worldwide. Groundwaters, together with deep sea environments, are some of the least explored ecosystems in the world. -
Ecopath with Ecosim: a User's Guide
ECOPATH WITH ECOSIM: A USER’S GUIDE by Villy Christensen, Carl J. Walters and Daniel Pauly October 2000 Edition Fisheries Centre University of British Columbia Vancouver, Canada and International Center for Living Aquatic Resources Management Penang, Malaysia No fish is an island… Christensen, V, C.J. Walters and D. Pauly. 2000. Ecopath with Ecosim: a User’s Guide, October 2000 Edition. Fisheries Centre, University of British Columbia, Vancouver, Canada and ICLARM, Penang, Malaysia. 130 p. 2 TABLE OF CONTENTS 1. ABSTRACT...................................................................................................................................... 7 2. INTRODUCTION ............................................................................................................................. 7 2.1 General conventions........................................................................................................................................8 2.2 How to obtain the Ecopath with Ecosim software...........................................................................................9 2.3 Software support, copyright and liability ........................................................................................................9 2.4 Installing and running Ecopath with Ecosim...................................................................................................9 2.5 Previous versions ............................................................................................................................................9 -
Relationships Between Bacteria and Heterotrophic Nanoplankton in Marine and Fresh Waters: an Inter-Ecosystem Comparison
MARINE ECOLOGY PROGRESS SERIES Published September 3 Mar. Ecol. Prog. Ser. Relationships between bacteria and heterotrophic nanoplankton in marine and fresh waters: an inter-ecosystem comparison Robert W. Sanders1,David A. caron2,Ulrike-G. ~erninger~ ' Academy of Natural Sciences of Philadelphia, 1900 Benjamin Franklin Parkway, Philadelphia, Pennsylvania 19103-1 195. USA Department of Biology, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, USA ABSTRACT: Despite differences in the species compositions and absolute abundances of planktonic microorganisms in fresh- and saltwater, there are broad similarities in microbial food webs across systems. Relative abundances of bacteria and nanoplanktonic protozoa (HNAN, primarily hetero- trophic flagellates) are similar in marine and freshwater environments, which suggests analogous trophic relationships. Ranges of microbe abundances in marine and fresh waters overlap, and seasonal changes in abundances within an ecosystem are often as great as differences in abundances between freshwater and marine systems of similar productivities. Densities of bacteria and heterotrophic nanoplankton, therefore, are strongly related to the degree of eutrophication, and not salt per se. Data from the literature is compiled to demonstrate a remarkably consistent numerical relationship (ca 1000 bacteria: l HNAN) between bacterioplankton and HNAN from the euphotic zones of a variety of marine and freshwater systems. Based on the results of a simple food web model involving bacterial growth, bacterial removal by HNAN, predation on HNAN, and the observed relationships between bacterial and HNAN abundances in natural ecosystems, it is possible to demonstrate that bottom-up control (food supply) is more important in regulating bacteiial abundances in oligotrophic environ- ments while top-down control (predation)is more important in eutrophic environments. -
Mexican Gray Wolves and the Ecology of Fear: a Comparative Assessment of Community Assemblages in Arizona
Mexican Gray Wolves and the Ecology of Fear: A Comparative Assessment of Community Assemblages in Arizona Item Type text; Electronic Thesis Authors Hoskinson, Joshua Scott Publisher The University of Arizona. Rights Copyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author. Download date 27/09/2021 14:03:39 Link to Item http://hdl.handle.net/10150/628170 MEXICAN GRAY WOLVES AND THE ECOLOGY OF FEAR: A COMPARATIVE ASSESSMENT OF COMMUNITY ASSEMBLAGES IN ARIZONA by JOSHUA SCOTT HOSKINSON ____________________________ Copyright © Joshua Scott Hoskinson 2018 A Thesis Submitted to the Faculty of the DEPARTMENT OF ECOLOGY AND EVOLUTIONARY BIOLOGY In Partial Fulfillment of the Requirements For the Degree of MASTER OF SCIENCE In the Graduate College THE UNIVERSITY OF ARIZONA 2018 Hoskinson2 Hoskinson3 ACKNOWLEDGMENTS This inaugural endeavor into scientific research could not have been done without substantial support and help of several people. With their help, I was able to complete this study, which will hopefully launch a successful scientific career in the field of ecology and conservation biology. First and foremost, I would like to Dr. Melanie Culver to allowing a quite ambitious (and surely quite taxing) graduate student to study in her lab – I cannot thank her enough for her generosity to allow me to complete a wildlife camera study in her primarily conservation genetics lab. It means a lot to me, and I will be forever grateful to her. -
KEEPING OPTIONS ALIVE: the Scientific Basis for Conserving Biodiversity
WORLD RESOURCES INSTITUTE KEEPING OPTIONS ALIVE: The Scientific Basis for Conserving Biodiversity WALTER V. REID KENTON R. MILLER KEEPING OPTIONS ALIVE: The Scientific Basis for Conserving Biodiversity Walter V. Reid Kenton R. Miller WORLD RESOURCES INSTITUTE A Center for Policy Research October 1989 Library of Congress Cataloging-in-Publication Data Reid, Walter V. C, 1956- Keeping options alive. (World Resources Institute Report) Includes bibliographical references. 1. Biological diversity conservation. I. Miller, Kenton. II. Title. III. Series. QH75.R44 1989 333.9516 89-22697 ISBN 0-915825-41-4 Kathleen Courrier Publications Director Brooks Clapp Marketing Manager Hyacinth Billings Production Manager Organization of American States; Mike McGahuey, World Bank photo/James Pickerell Cover Photos Each World Resources Institute Report represents a timely, scientific treatment of a subject of public concern. WRI takes responsibility for choosing the study topics and guaranteeing its authors and researchers freedom of inquiry. It also solicits and responds to the guidance of advisory panels and expert reviewers. Unless otherwise stated, however, all the interpretation and findings set forth in WRI publications are those of the authors. Copyright © 1989 World Resources Institute. All rights reserved. Reprinted 1993 Contents I. Introduction 1 Global Warming 52 Cumulative Effects 55 II. Why is Biological Diversity Important? .. .3 V. What's Happening to Agricultural The Role of Biodiversity in Ecosystems... 4 Genetic Diversity? 57 Ecological Processes 4 Ecological Dynamics 6 Uses of Genetic Diversity 57 In Situ Conservation 59 III. Where is the World's Biodiversity Ex Situ Conservation 61 Located? 9 VI. Biodiversity Conservation: What are the General Patterns of Species Right Tools for the Job? 67 Distribution 9 Species Richness 10 Land-use Zoning and Protected Areas .