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A Survey of Trunk Disease Pathogens Within Citrus Trees in Iran
plants Article A Survey of Trunk Disease Pathogens within Citrus Trees in Iran Nahid Espargham 1, Hamid Mohammadi 1,* and David Gramaje 2,* 1 Department of Plant Protection, Faculty of Agriculture, Shahid Bahonar University of Kerman, Kerman 7616914111, Iran; [email protected] 2 Instituto de Ciencias de la Vid y del Vino (ICVV), Consejo Superior de Investigaciones Científicas, Universidad de la Rioja, Gobierno de La Rioja, 26007 Logroño, Spain * Correspondence: [email protected] (H.M.); [email protected] (D.G.); Tel.: +98-34-3132-2682 (H.M.); +34-94-1899-4980 (D.G.) Received: 4 May 2020; Accepted: 12 June 2020; Published: 16 June 2020 Abstract: Citrus trees with cankers and dieback symptoms were observed in Bushehr (Bushehr province, Iran). Isolations were made from diseased cankers and branches. Recovered fungal isolates were identified using cultural and morphological characteristics, as well as comparisons of DNA sequence data of the nuclear ribosomal DNA-internal transcribed spacer region, translation elongation factor 1α, β-tubulin, and actin gene regions. Dothiorella viticola, Lasiodiplodia theobromae, Neoscytalidium hyalinum, Phaeoacremonium (P.) parasiticum, P. italicum, P. iranianum, P. rubrigenum, P. minimum, P. croatiense, P. fraxinopensylvanicum, Phaeoacremonium sp., Cadophora luteo-olivacea, Biscogniauxia (B.) mediterranea, Colletotrichum gloeosporioides, C. boninense, Peyronellaea (Pa.) pinodella, Stilbocrea (S.) walteri, and several isolates of Phoma, Pestalotiopsis, and Fusarium species were obtained from diseased trees. The pathogenicity tests were conducted by artificial inoculation of excised shoots of healthy acid lime trees (Citrus aurantifolia) under controlled conditions. Lasiodiplodia theobromae was the most virulent and caused the longest lesions within 40 days of inoculation. According to literature reviews, this is the first report of L. -
ASCOMYCOTA, XYLARIACEAE) EN LA REPÚBLICA ARGENTINA Darwiniana, Vol
Darwiniana ISSN: 0011-6793 [email protected] Instituto de Botánica Darwinion Argentina Hladki, Adriana I.; Romero, Andrea I. NOVEDADES PARA LOS GÉNEROS ANNULOHYPOXYLON E HYPOXYLON (ASCOMYCOTA, XYLARIACEAE) EN LA REPÚBLICA ARGENTINA Darwiniana, vol. 47, núm. 2, 2009, pp. 278-288 Instituto de Botánica Darwinion Buenos Aires, Argentina Disponible en: http://www.redalyc.org/articulo.oa?id=66914272005 Cómo citar el artículo Número completo Sistema de Información Científica Más información del artículo Red de Revistas Científicas de América Latina, el Caribe, España y Portugal Página de la revista en redalyc.org Proyecto académico sin fines de lucro, desarrollado bajo la iniciativa de acceso abierto DARWINIANA 47(2): 278-288. 2009 ISSN 0011-6793 NOVEDADES PARA LOS GÉNEROS ANNULOHYPOXYLON E HYPOXYLON (ASCOMYCOTA, XYLARIACEAE) EN LA REPÚBLICA ARGENTINA Adriana I. Hladki1 & Andrea I. Romero2 1Laboratorio de Micología, Fundación Miguel Lillo, Miguel Lillo 251, San Miguel de Tucumán, 4000 Tucumán, Argentina; [email protected], [email protected] (autor corresponsal). 2PHHIDEB-CONICET, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, Pabellón II, 4o. Piso, C1428EHA Ciudad Autónoma de Buenos Aires, Argentina. Abstract. Hladki, A. I. & A. I. Romero. 2009. Novelties for the genera Annulohypoxylon and Hypoxylon (Ascomy- cota, Xylariaceae) from Argentina. Darwiniana 47(2): 278-288. Two new varieties, Annulohypoxylon moriforme var. macrosporum and Hypoxylon investiens var. magnisporum are proposed; Annulohypoxylon nitens, Hypoxylon crocopeplum, H. subrutilum and H. rubiginosum var. microsporum are described as new records from Argentina. A dichotomous key to hypoxyloid taxa so far known from Argentina is presented. -
The Genus Biscogniauxia (Xylariaceae) in Guadeloupe and Martinique (French West Indies)
The genus Biscogniauxia (Xylariaceae) in Guadeloupe and Martinique (French West Indies) Jacques FOURNIER Abstract: This survey deals with the Biscogniauxia taxa collected in the French West Indies in the course of Christian LECHAT an ongoing inventorial work on the mycobiota of these islands initiated in 2003. Based on the evaluation Régis COURTECUISSE and comparison of their morphological characters, fourteen taxa are described, illustrated and discussed, including four new taxa, viz.: B. breviappendiculata, B. martinicensis, B. nigropapillata and B. sinuosa var. ma- crospora and a collection of uncertain taxonomic position tentatively regarded as related to B. uniapiculata. Ascomycete.org, 9 (3) : 67-99. The nine known taxa that we recorded include B. capnodes, B. capnodes var. limoniispora, B. capnodes var. Avril 2017 theissenii, B. citriformis, B. citriformis var. macrospora, B. grenadensis, B. philippinensis, B. uniapiculata and B. vis- Mise en ligne le 30/04/2017 cosicentra. Only three of the taxa that we report here were already known from the Caribbean, viz.: B. grena- densis, B. uniapiculata and B. cf. uniapiculata, and all are new to the French West Indies, except the latter which was collected in Guadeloupe. A dichotomous identification key and a synoptical table of ascospores are presented as well. Keywords: Ascomycota, Hypoxyloideae, pyrenomycetes, saproxylic fungi, taxonomy, tropical mycology, Xy- lariales. Résumé : cette étude porte sur les taxons de Biscogniauxia récoltés lors de missions d’inventaire de la fonge des Antilles françaises commencées en 2003. En se fondant sur l’évaluation et la comparaison de leurs ca- ractères morphologiques, quatorze taxons sont décrits, illustrés et commentés, comprenant les quatre taxons nouveaux B. -
UC Riverside UC Riverside Previously Published Works
UC Riverside UC Riverside Previously Published Works Title Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota). Permalink https://escholarship.org/uc/item/3fm155t1 Authors U'Ren, Jana M Miadlikowska, Jolanta Zimmerman, Naupaka B et al. Publication Date 2016-05-01 DOI 10.1016/j.ympev.2016.02.010 License https://creativecommons.org/licenses/by-nc-nd/4.0/ 4.0 Peer reviewed eScholarship.org Powered by the California Digital Library University of California *Graphical Abstract (for review) ! *Highlights (for review) • Endophytes illuminate Xylariaceae circumscription and phylogenetic structure. • Endophytes occur in lineages previously not known for endophytism. • Boreal and temperate lichens and non-flowering plants commonly host Xylariaceae. • Many have endophytic and saprotrophic life stages and are widespread generalists. *Manuscript Click here to view linked References 1 Contributions of North American endophytes to the phylogeny, 2 ecology, and taxonomy of Xylariaceae (Sordariomycetes, 3 Ascomycota) 4 5 6 Jana M. U’Ren a,* Jolanta Miadlikowska b, Naupaka B. Zimmerman a, François Lutzoni b, Jason 7 E. Stajichc, and A. Elizabeth Arnold a,d 8 9 10 a University of Arizona, School of Plant Sciences, 1140 E. South Campus Dr., Forbes 303, 11 Tucson, AZ 85721, USA 12 b Duke University, Department of Biology, Durham, NC 27708-0338, USA 13 c University of California-Riverside, Department of Plant Pathology and Microbiology and Institute 14 for Integrated Genome Biology, 900 University Ave., Riverside, CA 92521, USA 15 d University of Arizona, Department of Ecology and Evolutionary Biology, 1041 E. Lowell St., 16 BioSciences West 310, Tucson, AZ 85721, USA 17 18 19 20 21 22 23 24 * Corresponding author: University of Arizona, School of Plant Sciences, 1140 E. -
North American Fungi
North American Fungi Volume 7, Number 9, Pages 1-35 Published July 27, 2012 THE XYLARIACEAE OF THE HAWAIIAN ISLANDS Jack D. Rogers1 and Yu-Ming Ju2 1Department of Plant Pathology, Washington State University, Pullman, WA 99164-6430; 2Institute of Plant and Microbial Biology, Academia Sinica, Nankang, Taipei 115 29, Taiwan Rogers, J. D., and Y-M. Ju. 2012. The Xylariaceae of the Hawaiian Islands. North American Fungi 7(9): 1-35. doi: http://dx.doi: 10.2509/naf2012.007.009 Corresponding author: Jack D. Rogers [email protected] Accepted for publication journal July 16, 2012. http://pnwfungi.org Copyright © 2012 Pacific Northwest Fungi Project. All rights reserved. Abstract: Keys, species notes, references, hosts, and collection locations of the following xylariaceous genera are included: Annulohypoxylon, Ascovirgaria, Biscogniauxia, Daldinia, Hypoxylon, Jumillera, Kretzschmaria, Lopadostoma, Nemania, Rosellinia, Stilbohypoxylon, Xylaria, and Xylotumulus. Camarops and Pachytrype--non-xylariaceous genera--are included. Anthostomella, well-covered elsewhere, is not included here. A Host-Fungus Index is included. A new name, Xylaria alboareolata, is proposed. All of the Hawaiian Islands are included, but Lanai was not visited. Key words: Hawaiian Islands, Xylariaceae, including genera included in the Abstract (above). Introduction: The senior author became was joined in the work of identifying the interested in a mycobiotic study of the Hawaiian collections of the senior author and others by his Islands owing to experience studying former student and colleague, Yu-Ming Ju. xylariaceous specimens sent to him over a period of years by Donald Gardner, Roger Goos, W. Ko, The Hawaiian Islands are generally recognized Don Hemmes, Robert Gilbertson, and others. -
Nothofagus) Trees in the South Island of New Zealand
Canadian Journal of Forest Research Fungi decaying the wood of fallen beech (Nothofagus) trees in the South Island of New Zealand. Journal: Canadian Journal of Forest Research Manuscript ID cjfr-2018-0179.R1 Manuscript Type: Article Date Submitted by the 29-Aug-2018 Author: Complete List of Authors: Hood, Ian; Scion (New Zealand Forest Research Institute) McDougal, Rebecca; Scion Somchit, Chanatda; Scion Kimberley, Mark; Scion (New Zealand Forest Research Institute) Lewis, Aymee;Draft Scion Hood, Joy; 25 Simmonds Crescent fungal biodiversity, decomposer fungi, decay of fallen Nothofagus stems, Keyword: New Zealand indigenous forest ecology, basisiomycete wood colonisers Is the invited manuscript for consideration in a Special Not applicable (regular submission) Issue? : https://mc06.manuscriptcentral.com/cjfr-pubs Page 1 of 46 Canadian Journal of Forest Research 1 Fungi decaying the wood of fallen beech (Nothofagus) trees in the South Island of New Zealand. 2 3 Ian A. Hood, Rebecca L. McDougal, Chanatda Somchit, Mark O. Kimberley, Aymee S.R. Lewis and Joy 4 O.L. Hood 5 I.A. Hood, R.L. McDougal, C. Somchit, M.O. Kimberley, and A. Lewis. New Zealand Forest Research Institute (Scion), 6 Private Bag 3020, Rotorua 3046, New Zealand. 7 J.O.L. Hood. 25 Simmonds Crescent, Rotorua 3015, New Zealand. 8 Abstract 9 10 In order to extend present knowledge of communities of wood decay fungi in native forests, basidiomycetes 11 and ascomycetes were isolated from within 15 fallen stems in beech (Nothofagus, Nothofagaceae) forests in 12 the South Island of New Zealand. Fungal species were identified as precisely as possible using traditional 13 culturing and molecular approaches. -
Interesting Or Rare Xylariaceae from Thailand
Rajabhat J. Sci. Humanit . Soc. Sci. 13(1) 9 -19 Interesting or rare Xylariaceae from Thailand Anthony JS Whalley 1*, Cherdchai Phosri 2, Nutthaporn Ruchikachorn 3, Prakitsin Sihanonth 4, Ek Sangvichien 5, Nuttika Suwannasai 6, Surang Thienhirun 7 and Margaret Whalley 1 1School of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool, UK 2Faculty of Science & Technology, Pibulsongkram Rajabhat University, Phitsanulok, Thailand 3Plant Genetic Conservation Project Office, the Royal Chitralada Palace, Dusit, Bangkok, Thailand 4 Department of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok, Thailand 5 Department of Biology, Faculty of Science, Ramkhamhaeng University, Bangkok, Thailand 6 Department of Biology, Faculty of Science, Srinakharinwirot University, Bangkok, Thailand 7Royal Forest Department, Bangkok, Thailand corresponding author e-mail : [email protected] Abstract Twenty three genera of Xylariaceae are currently known from Thailand plus the anamorphic genus Muscodor which accounts for close to one third of all known genera. Most of the genera are widely represented throughout the country including Annulohypoxylon , Biscogniauxia , Daldinia , Hypoxylon , and Xylaria . Others are more restricted, sometimes to a single locality as seen with C. selangorensis and others e.g. Rostrohypoxylon , Rhopalostroma and individuals from a number of genera exhibit a northern presence. In common with studies on endophytic fungi in tropical plants Thailand is no exception with many xylariaceous fungi isolated with Xylaria species being especially frequent. The family in Thailand is considered to have many currently unknown members. keywords : diversity, endophytes, secondary metabolites, tropical fungi, xylariaceous fungi Introduction Poronia Willd., Rhopalostroma D. Hawksworth, Thailand is well known to have a rich and Rosellinia De Not., Rostrohypoxylon J. -
Biodiversity of Fungi on Vitis Vinifera L. Revealed by Traditional and High-Resolution Culture-Independent Approaches
Fungal Diversity (2018) 90:1–84 https://doi.org/10.1007/s13225-018-0398-4 (0123456789().,-volV)(0123456789().,-volV) Biodiversity of fungi on Vitis vinifera L. revealed by traditional and high-resolution culture-independent approaches 1,2,3 4 1,3 4,5 1,3 Ruvishika S. Jayawardena • Witoon Purahong • Wei Zhang • Tesfaye Wubet • XingHong Li • 1,3 6 2 1 1,3 Mei Liu • Wensheng Zhao • Kevin D. Hyde • JianHua Liu • Jiye Yan Received: 17 November 2017 / Accepted: 26 February 2018 / Published online: 14 March 2018 Ó The Author(s) 2018 Abstract This study is unique as it compares traditional and high-resolution culture-independent approaches using the same set of samples to study the saprotrophic fungi on Vitis vinifera. We identified the saprotrophic communities of table grape (Red Globe) and wine grape (Carbanate Gernischet) in China using both traditional and culture-independent techniques. The traditional approach used direct observations based on morphology, single spore isolation and phylogenetic analysis yielding 45 taxa which 19 were commonly detected in both cultivars. The same set of samples were then used for Illumina sequencing which analyzed ITS1 sequence data and detected 226 fungal OTUs, of which 176 and 189 belong to the cultivars Carbanate Gernischet and Red Globe, respectively. There were 139 OTUs shared between the two V. vinifera cultivars and 37 and 50 OTUs were specific to Carbanate Gernischet and Red Globe cultivars respectively. In the Carbanate Gernischet cultivar, Ascomycota accounted for 77% of the OTUs and in Red Globe, almost all sequenced were Ascomycota. The fungal taxa overlap at the genus and species level between the traditional and culture-independent approach was relatively low. -
AR TICLE Theissenia Reconsidered, Including
IMA FUNGUS · VOLUME 4 · no 1: 57–69 doi:10.5598/imafungus.2013.04.01.07 Theissenia reconsidered, including molecular phylogeny of the type ARTICLE species T. pyrenocrata and a new genus Durotheca (Xylariaceae, Ascomycota) Thomas Læssøe1, Prasert Srikitikulchai2, J. Jennifer D. Luangsa-ard2, and Marc Stadler3,* 1Department of Biology, University of Copenhagen, Universitetsparken 15, Copenhagen, DK-2100 Ø, Denmark 2National Center for Genetic Engineering and Biotechnology, 113 Thailand Science Park, Phahonyothin Road, Klong 1, Klong Luang, Pathumthani 12120, Thailand 3Helmholtz Centre for Infection Research GmbH, Dept. Microbial Drugs, Inhoffenstraße 7, 38124 Braunschweig, Germany; corresponding author e-mail: [email protected] Abstract: The genus Durotheca is introduced with D. depressa sp. nov., as type. Hypoxylon comedens is transferred to Key words: Durotheca, based on its morphology with further evidence from molecular phylogenetic studies; a combined b-tubulin and a-actin a-actin gene dataset. Theissenia cinerea is synonymized with D. comedens, and the type of Theissenia, T. pyrenocrata, ß-tubulin is shown to occupy a basal, rather distant position in a monotypic clade in relation to sequenced taxa of Durotheca. This Biodiversity clade has an unresolved position in relation to the two informal subfamilies “Xylarioideae” and “Hypoxyloideae” within SEM the Xylariaceae. New distributional data for D. comedens and T. pyrenocrata are presented, with the former found to be Thailand widespread in South-East Asia and the latter is reported as new from western Amazonia (Ecuador). One further species described in Theissenia, T. rogersii, is transferred to Durotheca, whilst T. eurima is accepted in Theissenia. Article info: Submitted: 10 March 2013; Accepted: 2 April 2013; Published: 14 May 2013. -
Universidade Federal Do Paraná
UNIVERSIDADE FEDERAL DO PARANÁ KELY DA SILVA CRUZ XYLARIACEAE (ASCOMYCOTA) NO PARQUE ESTADUAL DE SÃO CAMILO, PALOTINA, PR CURITIBA 2015 KELY DA SILVA CRUZ XYLARIACEAE (ASCOMYCOTA) NO PARQUE ESTADUAL DE SÃO CAMILO, PALOTINA, PR Dissertação apresentada ao Programa de Pós- Graduação em Botânica, área de concentração em Taxonomia, Biologia e Diversidade de Algas, Fungos e Liquens, Departamento de Botânica, Setor de Ciências Biológicas, Universidade Federal do Paraná, como requisito parcial à obtenção do título de Mestre em Botânica. Orientador: Prof. Dr. Vagner G. Cortez CURITIBA 2015 Dedico ao meu amado filho Keven Gustavo da S. Brandão. AGRADECIMENTOS Primeiramente a Deus, por me abençoar e dar força durante toda minha carreira científica. A minha família que esta sempre ao meu lado me apoiando e vibrando com as minhas conquistas. Todo carinho a minha mãe querida Mª. Lúcia, meu amado filho Keven, minha irmã Gisele que aceitou vir morar comigo no Paraná e me aturou durante o tempo do mestrado. A minha irmã Patrícia e meu irmão Lennon, pela força e ajuda. A minha segunda família, a qual Deus me deu a honra e o prazer de fazer parte, toda gratidão à tia Silvia, a Patty, a Silvete e a vovó Maria. Ao meu querido orientador, Prof. Dr. Vagner G. Cortez por ter aceitado o desafio de me orientar com esse grupo de fungos, obrigada pelos conhecimentos científicos transmitidos durante o curso. Aos professores do PPGBot, por todo o aprendizado. A minha querida amiga Maria Aparecida de Jesus, pelo incentivo, apoio e amizade. Aos pesquisadores Jadergudson Pereira, Marc Stadler, Jacques Fournier, Jack Rogers e Andrea Romero, pela ajuda com material para identificação. -
Biscogniauxia Rosacearum the Charcoal Canker Agent As A
www.nature.com/scientificreports OPEN Biscogniauxia rosacearum the charcoal canker agent as a pathogen associated with grapevine trunk diseases in Zagros region of Iran Zeinab Bahmani1, Jafar Abdollahzadeh1*, Jahanshir Amini1 & Antonio Evidente2 Grapevine trunk diseases (GTDs) are well-known and signifcant fungal diseases of Vitis vinifera with a worldwide distribution. During August to November 2016 in a survey to characterize fungi associated with grapevine trunk diseases in Kermanshah Province (west of Iran) vineyards, 286 fungal isolates were obtained. Based on morphology and DNA sequences data eight species were identifed, of which Biscogniauxia rosacearum, Neoscytalidium hyalinum and Phaeoacremonium minimum were the most aggressive fungal pathogenic species characterized in this research. N. hyalinum was the most prevalent species. N. hyalinum and Ph. minimum have previously been reported from Vitis vinifera. Thus far, there are two records of Biscogniauxia mediterranea and Biscogniauxia capnodes on grapevine in the world with no data on pathology aspects. To our knowledge, it is the frst time B. rosacearum is reported from grapevine across the globe. Pathogenicity test with three strains of B. rosacearum on 2-year-old potted grapevines confrmed the pathogenicity of B. rosacearum on grapevine. The proximity of vineyards to the oak trees in Zagros forests as one of the plant hosts of Biscogniauxia spp. further highlights the need for extensive studies on B. rosacearum as a new fungal pathogen. Vitis vinifera L. cultivars are the most widely planted trees around the globe with a high commercial value for fresh table grape, dried fruit, and wine production. According to food and agriculture organization of the United Nations (FAO) statistics, Iran ranks the twelfh in grapevine cultivation with a total area of 165,097 ha in the world, which accounts for 2,032,031 tons annual production1. -
A New Report of Biscogniauxia Petrensis Isolated from Mosquitoes in Korea
The Korean Journal of Mycology www.kjmycology.or.kr RESEARCH ARTICLE A New Report of Biscogniauxia petrensis Isolated from Mosquitoes in Korea 1 1 2 1,3 1,3,* Kallol Das , Joung-Ho Kim , Kwang-Shik Choi , Seung-Yeol Lee and Hee-Young Jung 1 School of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea 2 School of Life Sciences, Kyungpook National University, Daegu 41566, Korea 3 Institute of Plant Medicine, Kyungpook National University, Daegu 41566, Korea * Corresponding author: [email protected] ABSTRACT A fungal strain designated KNU-WDM2A2 was isolated from mosquitoes in Gimcheon, Korea. The pure culture was transferred to potato dextrose agar (PDA) and synthetic nutrient agar (SNA) media and attained a diameter of 90 mm after 10 days of incubation at 25℃. The colonies were whitish to light pink and cottony to wooly, with an abundant production of aerial mycelia. The strain produced hyaline to slightly yellowish conidiophores that were rough-walled and branched, with conidiogenous cells arising terminally or laterally. Conidia were unicellular, hyaline to light brown, smooth, and oval or ovoid to clavate, with a size of 4.1-6.9×2.5-3.3 μm (n=65). A phylogenetic analysis was conducted using the internal transcribed spacer (ITS) regions and 28S rDNA of large subunit (LSU) sequences, to support the cultural and morphological characteristics. The KNU-WDM2A2 strain was identified here as Biscogniauxia petrensis, new to Korea. Keywords: Biscogniauxia petrensis, morphology, mosquito, phylogeny OPEN ACCESS pISSN : 0253-651X eISSN : 2383-5249 INTRODUCTION Kor. J. Mycol. 2020 June, 48(2): 87-93 Sordariomycetes is the second largest class of Ascomycota [1] and includes 1,331 genera distributed https://doi.org/10.4489/KJM.20200010 across 105 families, 32 orders, and six subclasses [2].