Future Warming and Acidification Result in Multiple Ecological Impacts to a Temperate Coralline
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
DNA Variation and Symbiotic Associations in Phenotypically Diverse Sea Urchin Strongylocentrotus Intermedius
DNA variation and symbiotic associations in phenotypically diverse sea urchin Strongylocentrotus intermedius Evgeniy S. Balakirev*†‡, Vladimir A. Pavlyuchkov§, and Francisco J. Ayala*‡ *Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697-2525; †Institute of Marine Biology, Vladivostok 690041, Russia; and §Pacific Research Fisheries Centre (TINRO-Centre), Vladivostok, 690600 Russia Contributed by Francisco J. Ayala, August 20, 2008 (sent for review May 9, 2008) Strongylocentrotus intermedius (A. Agassiz, 1863) is an economically spines of the U form are relatively short; the length, as a rule, does important sea urchin inhabiting the northwest Pacific region of Asia. not exceed one third of the radius of the testa. The spines of the G The northern Primorye (Sea of Japan) populations of S. intermedius form are longer, reaching and frequently exceeding two thirds of the consist of two sympatric morphological forms, ‘‘usual’’ (U) and ‘‘gray’’ testa radius. The testa is significantly thicker in the U form than in (G). The two forms are significantly different in morphology and the G form. The morphological differences between the U and G preferred bathymetric distribution, the G form prevailing in deeper- forms of S. intermedius are stable and easily recognizable (Fig. 1), water settlements. We have analyzed the genetic composition of the and they are systematically reported for the northern Primorye S. intermedius forms using the nucleotide sequences of the mitochon- coast region (V.A.P., unpublished data). drial gene encoding the cytochrome c oxidase subunit I and the Little is known about the population genetics of S. intermedius; nuclear gene encoding bindin to evaluate the possibility of cryptic the available data are limited to allozyme polymorphisms (4–6). -
Histoire Des Idees Sur L'evolution De L'homme
Thèse présentée pour obtenir le grade de Docteur de l'Université Louis Pasteur Strasbourg I Discipline : Sciences de la Vie Par Claude STOLL HISTOIRE DES IDEES SUR L'EVOLUTION DE L'HOMME Tome I Soutenue publiquement le 24.10.2008 Membres du Jury Directeur de Thèse : M. Jean-Marie VETTER, Professeur, ULP Co-Directeur de Thèse : M. Jean-Claude GALL, Professeur, ULP Rapporteur Interne : M. Jean-Jacques ROEDER, DR, CNRS Rapporteur Externe : Mme Brigitte SENUT, Professeur, MNHN Rapporteur Externe : M. Josué FEINGOLD, DR INSERM, U.155 REMERCIEMENTS Commencer à rédiger les Remerciements d'une thèse est un moment particulièrement apprécié, tout d'abord parce que, comme il s'agit de la partie que l'on rédige en dernier, cela signifie que la rédaction du manuscrit est (enfin !) terminée, et ensuite parce que c'est le moment où l'on peut faire apparaître la dimension vraie du travail. Une image relativement courante décrit le thésard seul dans ses questionnements ; en ce qui concerne ce travail, cela n'a pas été le cas. Au contraire, cette période de réalisation de thèse a été pour nous l'occasion d'une véritable aventure humaine. Si l'on suit l'évolution de ce travail, nos remerciements vont au Professeur Jean-Claude Gall qui nous a accueilli à l'Institut de Géologie et nous a donné les moyens de faire ce travail. Il a dirigé notre thèse. Il a eu la patience de nous encadrer durant ces cinq années. Nous voudrions lui exprimer notre reconnaissance pour ses précieux conseils lors de nos conversation scientifiques, pour son encadrement, sa vision scientifique, sa pédagogie et les conseils avisés qu'il nous a prodigués tout au long de ce travail de thèse. -
Evo Devo.Pdf
FROM EMBRYOLOGY TO EVO-DEVO Dibner Institute Studies in the History of Science and Technology George Smith, general editor Jed Z. Buchwald and I. Bernard Cohen, editors, Isaac Newton’s Natural Philosophy Jed Z. Buchwald and Andrew Warwick, editors, Histories of the Electron: The Birth of Microphysics Geoffrey Cantor and Sally Shuttleworth, editors, Science Serialized: Representations of the Sciences in Nineteenth-Century Periodicals Michael Friedman and Alfred Nordmann, editors, The Kantian Legacy in Nineteenth-Century Science Anthony Grafton and Nancy Siraisi, editors, Natural Particulars: Nature and the Disciplines in Renaissance Europe J. P. Hogendijk and A. I. Sabra, editors, The Enterprise of Science in Islam: New Perspectives Frederic L. Holmes and Trevor H. Levere, editors, Instruments and Experimentation in the History of Chemistry Agatha C. Hughes and Thomas P. Hughes, editors, Systems, Experts, and Computers: The Systems Approach in Management and Engineering, World War II and After Manfred D. Laubichler and Jane Maienschein, editors, From Embryology to Evo-Devo: A History of Developmental Evolution Brett D. Steele and Tamera Dorland, editors, The Heirs of Archimedes: Science and the Art of War Through the Age of Enlightenment N. L. Swerdlow, editor, Ancient Astronomy and Celestial Divination FROM EMBRYOLOGY TO EVO-DEVO: A HISTORY OF DEVELOPMENTAL EVOLUTION edited by Manfred D. Laubichler and Jane Maienschein The MIT Press Cambridge, Massachusetts London, England © 2007 Massachusetts Institute of Technology All rights reserved. No part of this book may be reproduced in any form by any electronic or mechanical means (including photocopying, recording, or information storage and retrieval) without permission in writing from the publisher. -
Echinodermata: the Complex Immune System in Echinoderms
Echinodermata: The Complex Immune System in Echinoderms L. Courtney Smith, Vincenzo Arizza, Megan A. Barela Hudgell, Gianpaolo Barone, Andrea G. Bodnar, Katherine M. Buckley, Vincenzo Cunsolo, Nolwenn M. Dheilly, Nicola Franchi, Sebastian D. Fugmann, Ryohei Furukawa, Jose Garcia-Arraras, John H. Henson, Taku Hibino, Zoe H. Irons, Chun Li, Cheng Man Lun, Audrey J. Majeske, Matan Oren, Patrizia Pagliara, Annalisa Pinsino, David A. Raftos, Jonathan P. Rast, Bakary Samasa, Domenico Schillaci, Catherine S. Schrankel, Loredana Stabili, Klara Stensväg, and Elisse Sutton Echinoderm Life History and Phylogeny Echinoderms are benthic marine invertebrates living in communities ranging from shallow nearshore waters to the abyssal depths. Often members of this phylum are top predators or herbivores that shape and/or control the ecological characteristics All co-authors contributed equally to this chapter and are listed in alphabetical order. L. C. Smith (*) · M. A. Barela Hudgell · K. M. Buckley Department of Biological Sciences, George Washington University, Washington, DC, USA e-mail: [email protected] V. Arizza · G. Barone · D. Schillaci Department of Biological, Chemical and Pharmaceutical Sciences and Technologies (STEBICEF), University of Palermo, Palermo, Italy A. G. Bodnar Bermuda Institute of Ocean Sciences, St. George’s Island, Bermuda Gloucester Marine Genomics Institute, Gloucester, MA, USA V. Cunsolo Department of Chemical Sciences, University of Catania, Catania, Italy N. M. Dheilly School of Marine and Atmospheric Sciences, Stony Brook University, Stony Brook, NY, USA N. Franchi Department of Biology, University of Padova, Padua, Italy © Springer International Publishing AG, part of Springer Nature 2018 409 E. L. Cooper (ed.), Advances in Comparative Immunology, https://doi.org/10.1007/978-3-319-76768-0_13 410 L. -
An Updated Synthesis of the Impacts of Ocean Acidification on Marine Biodiversity CBD Technical Series No
Secretariat of the CBD Technical Series Convention on No. 75 Biological Diversity 75 An Updated Synthesis of the Impacts of Ocean Acidification on Marine Biodiversity CBD Technical Series No. 75 AN UPDATED SYNTHESIS OF THE IMPACTS OF OCEAN ACIDIFICATION ON MARINE BIODIVERSITY The designations employed and the presentation of material in this publication do not imply the expression of any opinion whatsoever on the part of the copyright holders concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. This publication may be reproduced for educational or non-profit purposes without special permission, provided acknowledgement of the source is made. The Secretariat of the Convention would appreciate receiving a copy of any publications that use this document as a source. Reuse of the figures is subject to permission from the original rights holders. Published by the Secretariat of the Convention on Biological Diversity. ISBN 92-9225-527-4 (print version); ISBN 92-9225-528-2 (web version) Copyright © 2014, Secretariat of the Convention on Biological Diversity Citation: Secretariat of the Convention on Biological Diversity (2014). An Updated Synthesis of the Impacts of Ocean Acidification on Marine Biodiversity (Eds: S. Hennige, J.M. Roberts & P. Williamson). Montreal, Technical Series No. 75, 99 pages For further information, contact: Secretariat of the Convention on Biological Diversity World Trade Centre, 413 Rue St. Jacques, Suite 800, Montréal, Quebec,Canada H2Y 1N9 Tel: +1 (514) 288 2220 Fax: +1 (514) 288 6588 E-mail: [email protected] Website: www.cbd.int Cover images, top to bottom: Katharina Fabricius; N. -
Bioaccumulation and Depuration in Sea Urchins Paracentrotus Lividus
Bioaccumulation and depuration in sea urchins Paracentrotus lividus (Lebanon) and Heliocidaris erythrogramma (Australia) Waste deposit mountain Carol M.S. Sukhn MSc Subtidal Ecology and Ecotoxicology Evolution and Ecology Research Center School of Biological, Earth and Environmental Sciences University of New South Wales Sydney Australia Thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy at the University of New South Wales School of Biological, Earth and Environmental Sciences (BEES) Faculty of Science March 2013 ii THE UNIVERSITY OF NEW SOUTH WALES Thesis/Dissertation Sheet Surname or Family name: Sukhn First name: Carol Other given name/s: N/A Abbreviations for degree as given in the University Calendar: PhD School: Biological, Earth & Environmental Sciences Faculty: Science Title: Bioaccumulation and depuration in sea urchins Paracentrotus lividus (Lebanon) and Heliocidaris erythrogramma (Australia). Abstract With toxicants being introduced daily into the environment, monitoring becomes an essential tool for the protection of human health and biota. The sea urchin, Paracentrotus lividus, was surveyed off the Lebanese coast to assess whether proximity to a major source of pollution affected abundance, biomass, size and metal content of the urchin. Metal concentrations in four body parts of the urchin did not vary with distance from the pollution source, nor did size, abundance and biomass, which were more directly affected by an unplanned closure to the fishery in 2007. The distribution of the urchin is therefore not considered a sensitive bioindicator of contamination, however, the contaminant loads measured are considered a direct concern with regards to human health, as consumption of urchin roe is currently unregulated. -
Acclimatisation and Adaptive Capacity of Sea Urchins in a Changing Ocean
COPYRIGHT AND USE OF THIS THESIS This thesis must be used in accordance with the provisions of the Copyright Act 1968. Reproduction of material protected by copyright may be an infringement of copyright and copyright owners may be entitled to take legal action against persons who infringe their copyright. Section 51 (2) of the Copyright Act permits an authorized officer of a university library or archives to provide a copy (by communication or otherwise) of an unpublished thesis kept in the library or archives, to a person who satisfies the authorized officer that he or she requires the reproduction for the purposes of research or study. The Copyright Act grants the creator of a work a number of moral rights, specifically the right of attribution, the right against false attribution and the right of integrity. You may infringe the author’s moral rights if you: - fail to acknowledge the author of this thesis if you quote sections from the work - attribute this thesis to another author - subject this thesis to derogatory treatment which may prejudice the author’s reputation For further information contact the University’s Copyright Service. sydney.edu.au/copyright Acclimatisation and adaptive capacity of sea urchins in a changing ocean: Effects of ocean warming and acidification on early development and the potential to persist Shawna Andrea Foo A thesis submitted to the University of Sydney in fulfillment of the requirements for the degree of Doctor of Philosophy Department of Anatomy and Histology, University of Sydney November 2015 TABLE OF CONTENTS ACKNOWLEDGEMENTS ......................................................................................... VI ABSTRACT ................................................................................................................. VII CHAPTER 1 – General Introduction ........................................................................... -
Echinoidea: Camarodonta: Echinometridae) from Jeju Island, Korea and Its Molecular Analysis
Anim. Syst. Evol. Divers. Vol. 28, No. 3: 178-184, July 2012 http://dx.doi.org/10.5635/ASED.2012.28.3.178 Short communication New Record of a Sea Urchin Echinometra mathaei (Echinoidea: Camarodonta: Echinometridae) from Jeju Island, Korea and Its Molecular Analysis Taekjun Lee1, Sook Shin2,* 1Department of Biotechnology, Korea University, Seoul 136-701, Korea 2Department of Life Science, Sahmyook University, Seoul 139-742, Korea ABSTRACT Echinoids were collected at depths of 5-10 m in Munseom, Jeju Island by SCUBA diving on November 23, 2008 and September 15, 2009. Two specimens were identified as Echinometra mathaei (Blainville, 1825) based on morphological characteristics and molecular analyses of mitochondrial cytochrome c oxidase subunit I partial sequences. Echinometra mathaei collected from Korea was redescribed with photographs and was compared with other species from GenBank based on molecular data. Phylogenetic analyses showed that no significant differences were between base sequences of E. mathaei from Korea and that from GenBank. To date, 13 echinoids including this species have been reported from Jeju Island, and 32 echinoids have been recorded in Korea. Keywords: taxonomy, sea urchin, Echinometridae, molecular phylogeny, cytochorome c oxidase subunit I INTRODUCTION 2000; Landry et al., 2003) studies were conducted due to the obscure relationship between these species. A morphologi- Genus Echinometra species generally occur throughout the cal and molecular examination and identification of Echino- tropical Pacific and also from East Africa to the Indian Ocean metra specimens collected from Munseom of Jeju Island, (Clark and Rowe, 1971). This genus contains seven extant Korea was performed in the present study. -
Evolution of Abbreviated Development in Heliocidaris Erythrogramma
bioRxiv preprint doi: https://doi.org/10.1101/712216; this version posted July 23, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Full Title: Evolution of abbreviated development in Heliocidaris erythrogramma 2 dramatically re-wired the highly conserved sea urchin developmental gene regulatory 3 network to decouple signaling center function from ultimate fate 4 5 Short Title: Heliocidaris life history switch rewired early gene regulatory network 6 7 Authors and affiliations: 8 Allison Edgar1,2, Maria Byrne 2,3, David R. McClay1, Gregory A. Wray1,4 9 1Department of Biology, Duke University, Durham, NC, USA 10 2School of Medical Science and Bosch Institute, Department of Anatomy and Histology, 11 The University of Sydney, Sydney, NSW, Australia 12 3School of Life and Environmental Sciences, The University of Sydney, Sydney, NSW, 13 Australia 14 4Center for Genomic and Computational Biology, Duke University, Durham, NC 27708, 15 USA. 16 17 Email addresses of corresponding authors: Allison Edgar: [email protected]; Gregory 18 A. Wray: [email protected]) 19 20 Email addresses of co-authors: 21 Maria Byrne: [email protected]; David R. McClay: [email protected] 22 23 1 bioRxiv preprint doi: https://doi.org/10.1101/712216; this version posted July 23, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. -
(Echinoidea: Camarodonta: Strongylocentrotidae) Based on Morphological and Molecular Analysis in Korea
Korean J. Syst. Zool. Vol. 27, No. 3: 213-219, November 2011 ISSN 2233-7687 http://dx.doi.org/10.5635/KJSZ.2011.27.3.213 A New Record of Sea Urchin (Echinoidea: Camarodonta: Strongylocentrotidae) Based on Morphological and Molecular Analysis in Korea Taekjun Lee, Sook Shin* Department of Life Science, Sahmyook University, Seoul 139-742, Korea ABSTRACT Some echinoids were collected from the coast of Gangwon-do during the period from November 2008 to July 2011 and were identified on the basis of morphological characteristics and molecular analysis of cytochrome oxidase subunit I mitochondrial DNA. Among them, Strongylocentrotus pallidus (Sars, 1871) belonging to the family Strongylocentrotidae of the order Camarodonta is reported for the first time in Korea and is redescribed. The genetic differences ranged from 0.038 to 0.139 between S. pallidus and four other species of genus Strongylocentrotus, but ranged from 0.002 to 0.005 between Korean specimens and GenBank data of S. pallidus. This species is widely distributed in cold sea water along the western part of the North Pacific and the Northwest Atlantic. Keywords: Echinoidea, sea urchin, Strongylocentrotus pallidus, cytochrome oxidase subunit I INTRODUCTION adjacent species using cytochrome oxidase subunit I (COI) mitochondrial DNA (mtDNA). The genus Strongylocentrotus of the family Strongylocentro- tidae consists of nine species globally (Smith, 2005; Kroh and Mooi, 2011): S. djakonovi, S. droebachiensis, S. franci- MATERIALS AND METHODS scanus, S. intermedius, S. nudus, S. pallidus, S. polyacan- thus, S. pulchellus and S. purpuratus. Among them, S. inter- Sample collection and identification medius and S. nudus were reported in Korea (Shin and Rho, The specimens of Strongylocentrotus were collected using 1996; Shin, 1998, 2011). -
Adaptive Evolution of Bindin in the Genus Heliocidaris Is Correlated with the Shift to Direct Development
Evolution, 57(10), 2003, pp. 2293±2302 ADAPTIVE EVOLUTION OF BINDIN IN THE GENUS HELIOCIDARIS IS CORRELATED WITH THE SHIFT TO DIRECT DEVELOPMENT KIRK S. ZIGLER,1,2,3 ELIZABETH C. RAFF,4,5 ELLEN POPODI,4,6 RUDOLF A. RAFF,4,7 AND H. A. LESSIOS1,8 1Smithsonian Tropical Research Institute, Box 2072, Balboa, Panama 2Department of Biology, Duke University, Durham, North Carolina 27708 4Department of Biology and Molecular Biology Institute, Indiana University, Bloomington, Indiana 47405 5E-mail: [email protected] 6E-mail: [email protected] 7E-mail: [email protected] 8E-mail: [email protected] Abstract. Sea urchins are widely used to study both fertilization and development. In this study we combine the two ®elds to examine the evolution of reproductive isolation in the genus Heliocidaris. Heliocidaris tuberculata develops indirectly via a feeding larva, whereas the only other species in the genus, H. erythrogramma, has evolved direct development through a nonfeeding larva. We estimated the time of divergence between H. erythrogramma and H. tuberculata from mitochondrial DNA divergence, quanti®ed levels of gametic compatibility between the two species in cross-fertilization assays, and examined the mode of evolution of the sperm protein bindin by sequencing multiple alleles of the two species. Bindin is the major component of the sea urchin sperm acrosomal vesicle, and is involved in sperm-egg attachment and fusion. Based on our analyses, we conclude that: the two species of Heliocidaris diverged less than ®ve million years ago, indicating that direct development can evolve rapidly in sea urchins; since their divergence, the two species have become gametically incompatible; Heliocidaris bindin has evolved under positive selection; and this positive selection is concentrated on the branch leading to H. -
Sea Urchins (Echinodermata: Echinoidea): Their Biology, Culture and Bioactive Compounds
International Conference on Agricultural, Ecological and Medical Sciences (AEMS-2014) July 3-4, 2014 London (United Kingdom) Sea Urchins (Echinodermata: Echinoidea): Their Biology, Culture and Bioactive Compounds M. Aminur Rahman*, A. Arshad, and Fatimah Md. Yusoff fishery is closely connected to that of the fisheries, whose fortune Abstract—The gonads of both male and female sea urchins, will eventually depend upon the stock enhancement, culture commonly known as "Sea urchin Roe”, are culinary delicacies in improvement, quality roe production and market forces that will many parts of the world. The roe of sea urchins is considered as a shape this rising industry in a very worthwhile and significant prized delicacy in Asian, Mediterranean and Western Hemisphere manner. countries and have long been using as luxury foods in Japan. Japanese demand for sea urchins raised concerns about overfishing, Keywords—Sea urchin, Biology, Aquaculture, Enhancement, thus making it one of the most valuable sea foods in the world. The Roe, Bioactive compounds. population of the Asian Pacific Region has been using it for long time as a remedy for improving general living tone and treatment for I. INTRODUCTION a number of diseases. Sea urchin gonads are also rich in valuable EA urchins are classic objects of research in different bioactive compounds, such as polyunsaturated fatty acids (PUFAs) S fields of biology, ecology, biodiversity and evolution. At and β-carotene. PUFAs, especially eicosapentaenoic acid (EPA, the same time, they are used as raw material to produce C20:5) (n-3)) and docosahexaenoic acid (DHA C22:6 (n-3)), have foodstuff, in particular, the product of processing gonads significant preventive effects on arrhythmia, cardiovascular diseases known as "Sea urchin Roe" [1−3].