University of Massachusetts Amherst ScholarWorks@UMass Amherst Microbiology Department Faculty Publication Series Microbiology 2020 Transcriptome analysis of the brown rot fungus Gloeophyllum trabeum during lignocellulose degradation Kiwamu Umezawa Mai Niikura Yuka Kojima Barry Goodell Makoto Yoshida Follow this and additional works at: https://scholarworks.umass.edu/micro_faculty_pubs PLOS ONE RESEARCH ARTICLE Transcriptome analysis of the brown rot fungus Gloeophyllum trabeum during lignocellulose degradation 1,2 1 1 3 1 Kiwamu UmezawaID *, Mai Niikura , Yuka Kojima , Barry Goodell , Makoto Yoshida 1 Department of Environmental and Natural Resource Science, Tokyo University of Agriculture and Technology, Tokyo, Japan, 2 Department of Applied Biological Chemistry, Kindai University, Nara, Japan, 3 Department of Microbiology, University of Massachusetts Amherst, Amherst, Massachusetts, United States of America a1111111111 a1111111111 *
[email protected] a1111111111 a1111111111 a1111111111 Abstract Brown rot fungi have great potential in biorefinery wood conversion systems because they are the primary wood decomposers in coniferous forests and have an efficient lignocellulose OPEN ACCESS degrading system. Their initial wood degradation mechanism is thought to consist of an oxi- Citation: Umezawa K, Niikura M, Kojima Y, Goodell dative radical-based system that acts sequentially with an enzymatic saccharification sys- B, Yoshida M (2020) Transcriptome analysis of the tem, but the complete molecular mechanism of this system has not yet been elucidated. brown rot fungus Gloeophyllum trabeum during Some studies have shown that wood degradation mechanisms of brown rot fungi have lignocellulose degradation. PLoS ONE 15(12): diversity in their substrate selectivity. Gloeophyllum trabeum, one of the most studied brown e0243984. https://doi.org/10.1371/journal. pone.0243984 rot species, has broad substrate selectivity and even can degrade some grasses.