Research Article 4455 Size, position and dynamic behavior of PML following stress as a paradigm for supramolecular trafficking and assembly

Christopher H. Eskiw1, Graham Dellaire1, Joe S. Mymryk2 and David P. Bazett-Jones1,* 1Programme in Cell Biology, The Hospital for Sick Children, Toronto, Canada 2Departments of Microbiology and Immunology, Physiology and Pharmacology, and Oncology, The University of Western Ontario, London Regional Cancer Centre, London, Canada *Author for correspondence (e-mail: [email protected])

Accepted 8 July 2003 Journal of Cell Science 116, 4455-4466 © 2003 The Company of Biologists Ltd doi:10.1242/jcs.00758

Summary The promyelocytic leukemia (PML) protein has been not random accumulations of protein. Over-expression of implicated in many cellular pathways, but it is unclear small -like modifier (SUMO-1) prevents stress- whether the accumulation of PML and other proteins into induced disassembly of PML bodies, implicating SUMO-1 PML nuclear bodies is a regulated or random process. In as a key regulator of PML body integrity. Stress-induced this paper we have used a variety of physiological stresses, fission of SUMO-1-deficient microstructures from parental including heat stress, Cd+2 exposure and adenovirus E1A PML bodies may be a mechanism to change local expression, as tools to study the principles underlying the domain environments by the dispersal of protein assembly/disassembly, integrity and dynamic behavior factors. PML bodies may provide a useful paradigm for the of PML bodies. Using live-cell imaging and dynamics and integrity of other supramolecular protein immunofluorescence microscopy, we observe that PML complexes involved in processes such as transcription, RNA bodies are positionally stable over time intervals of a few processing DNA repair and replication. hours. After stress, however, microstructures form as a result of fission or budding from the surface of ‘parental’ PML bodies. Since new PML bodies do not form at new Movies and supplemental data available online locations, and the relative sizes observed before heat shock are preserved after recovery, we conclude that there are Key words: Nuclear structure, Nuclear dynamics, PML bodies, pre-determined locations for PML bodies, and that they are Chromatin, Live-cell imaging

Introduction move through the as intact entities (Muratani et The mammalian eukaryotic nucleus is a highly structured al., 2002). organelle containing a variety of specialized domains that PML bodies have been implicated in many cellular accumulate proteins of specific functions. These large multi- pathways, including control of apoptosis (reviewed by protein domains have been shown to possess dynamic Salomoni and Pandolfi, 2002; Eskiw and Bazett-Jones, 2002), characteristics. At the molecular level, fluorescence recovery viral pathogenicity (reviewed by Regard and Chelbi-Alix, after photobleaching experiments indicate that most proteins 2001) and control of higher order chromatin structure (de Jong are highly mobile in the nucleoplasm and their exchange with et al., 1996). Several models have been proposed for the chromatin or nuclear subdomains is dynamic (Misteli, 2001). function of PML bodies. In one model, PML bodies have no At the level of the subdomains themselves, dynamic behavior direct function but represent random aggregations of excess is also exhibited. For example, nuclear speckles or nucleoplasmic proteins. In a second model, the bodies may interchromatin granule clusters undergo fission events function as storage sites, maintaining proper nucleoplasmic involving supramolecular complexes (Misteli et al., 1997; levels of particular factors. The bodies may also serve as sites Kruhlak et al., 2000). Cajal bodies move through the for post-translational modification of factors. For example, the nucleoplasm by constrained diffusion, through repeated cycles co-accumulation of the protein acetyltransferase cyclic AMP- of association and disassociation with chromatin by an energy- response element binding(CREB)-binding protein (CBP) at dependent mechanism. These bodies also undergo fission PML bodies along with one of its substrates, p53, may events (Platani et al., 2000; Platani et al., 2002). It has been constitute an important step in regulating its modification proposed that promyelocytic leukemia (PML) bodies are based (LaMorte et al., 1998; Doucas et al., 1999; von Mikecz et al., on a supramolecular subunit(s) (Kentsis et al., 2002). This 2000; Bandobashi et al., 2001; Boisvert et al., 2001). In a third raises the possibility that PML bodies could assemble or model, PML bodies may function as sites of specific nuclear disassemble by fusion or fission mechanisms. Finally, a sub- events. For example, early gene transcription and replication class of PML bodies has been reported to have the potential to of several viruses occur in the vicinity of PML bodies (Ishov 4456 Journal of Cell Science 116 (21) et al., 1997). Recently, Shiels and co-workers have shown that cyanide 4-(trifluoromethoxy) phenylhydrazone (FCCP; Sigma, the MHC class I gene cluster is located on the surface of a catalogue no. C-2920) and 200 mM 2′-deoxy-glucose (Sigma, D- subset of PML bodies, indicating that PML bodies may 3179) for 2 hours. participate in the regulation of particular genes, or gene Protein extracts were prepared from 80% confluent cultures of cells grown in 10 cm culture dishes. Heat shock was performed at 43°C for families (Shiels et al., 2001). Nevertheless, it is still unclear µ +2 whether PML bodies play an active role in nuclear events, 30 minutes and cadmium shock with 50 M Cd for 2 hours. Cells were then lysed in 800 µl of 6 M guanidinium-HCl. Proteins were whether they form as a result of nuclear events, or are simply precipitated by mixing with 800 µl of 10% trichloroacetic acid, briefly random accumulations of excess nuclear factors (Negorev and vortexed, followed by a 20-minute incubation on ice. The mixture was Maul, 2001). centrifuged at 4°C for 20 minutes, and the resulting pellet was washed In this paper we have used a variety of cellular stresses as tools with 400 µl of 95% ethanol, dried and resuspended in 400 µl SDS- to study the principles underlying the assembly/disassembly, PAGE sample buffer. For western blots, equal volumes of sample were integrity, size, location and dynamic behavior of PML bodies. loaded per lane, and the relative proteins concentration determined by Environmental stresses such as heat shock, heavy metal shock, Coomassie Blue staining. Levels of HSP70 protein were analyzed or viral protein expression, cause the dissociation of PML bodies using mouse anti-HSP70 (Stressgen). into many smaller punctate domains (Maul et al., 1995), which we will refer to as microstructures. Using live-cell imaging and Immunofluorescence microscopy, cell imaging and immunofluorescence microscopy, we observe that PML bodies quantification are positionally stable over time intervals of a few hours. After Cells grown on glass cover slips were fixed in 4% stress, however, microstructures form as a result of fission or paraformaldehyde/PBS (pH 7.5) for 5 minutes at room temperature, budding from the surface of ‘parental’ PML bodies. Energy permeabilized in 0.5% Triton X-100 in PBS for 5 minutes at room depletion does not affect the microstructure diffusion rate. All temperature. PML protein was visualized with the monoclonal microstructures eventually fuse with parental PML body antibody 5E10 (a gift from R. van Driel) or polyclonal rabbit anti- remnants. Since new PML bodies do not form at new locations, PML (catalogue no. AB-1370, Chemicon International). Sp100 was and the relative sizes observed before heat shock are preserved labeled with rabbit anti-Sp100 antibodies (catalogue no. AB1380, after recovery, we conclude that there are pre-determined Chemicon International) and CBP was labeled with rabbit anti-amino- locations for PML bodies, and that they are not random terminal CBP antibodies (catalogue 3 sc-369, Santa Cruz Biotechnology, Inc.). Endogenous SUMO-1 localization was accumulations of protein. Finally, small ubiquitin-like modifier determined by labeling cells with mouse anti-GMP-1 (catalogue no. (SUMO-1) is not detected in PML-containing microstructures 33-2400, Zymed Laboratories). immediately following stress, but accumulates in these structures Nascent transcripts were visualized by the incorporation of 5′- during recovery. Furthermore, transient over-expression of fluorouridine (Sigma Biotechnologies) followed by labeling cells with SUMO-1 prevents the stress-induced dissociation of PML into mouse anti-BrdU primary antibodies (Sigma Biotechnologies). microstructures. Together, these data indicate a key role for Secondary labeling was conducted using goat anti-mouse Cy3, goat SUMO-1 in the mechanism of stress-induced dissociation and anti-rabbit Cy5, goat anti-rabbit A488 or donkey anti-goat Cy5. Cover subsequent re-assembly of PML bodies. slips were mounted on glass slides using PBS/90% glycerol containing 1 mg/ml paraphenlenediamine (PPDA) and 1 µg/ml of the DNA specific stain, DAPI. Images were collected on a Leica Materials and Methods Microsystems DMRA2 upright microscope. Haze removal by Cell culture, transfection and protein extracts deconvolution was performed using either Open Lab 3.0.7 software SK-N-SH cells were cultured on glass cover slips in JMEM or DMEM (Improvision) or Volocity 2.0 software (Improvision). Images were medium to high confluency (80-90%). Cells were transfected with false-colored using Image J (NIH) software and presented using either 2 µg of pCMX-GFP-PML3 DNA (PML IV) (Jensen et al., 2001) Adobe PhotoShop 6.0. Quantification of relative protein composition [a gift from R. Evans, The Salk Institute for Biological Studies, La of PML-containing structures was obtained from unprocessed optical Jolla CA; described previously by Boisvert et al. (Boisvert et al., sections of fluorescence images. Rectangular regions-of-interest 2001)], DSred-PML IV DNA (a gift from M. Hendzel, University of masks were drawn around structures. Integrated intensities were Alberta), eGFP-SUMO1 (a gift from Y. Kim, National Institutes for obtained from mean values above background multiplied by the area Health) or pEGFP-E1A (see below) per cover slip using 5µl of the region-of-interest. The same mask was used in both the PML’s lipofectamine 2000 (Invitrogen) in 200 µl Opti-MEM. The and the other protein’s fluorescence images. The background value DNA/lipofectamine mix was placed on the cover slips and incubated was obtained by masks drawn in the immediate vicinity surrounding in 2 ml Opti-MEM (BRL-Gibco) for 6 hours at 37°C. Opti-MEM was the structures of interest. replaced with JMEM or DMEM and the cells were allowed to express For analysis of live cells expressing GFP-PML, cover slips were the transgene for 12 to 24 hours at 37°C. pEGFP-E1A expresses the placed on a live cell environmental chamber constructed in our 289-residue Ad5 E1A protein and was constructed by subcloning the laboratory. The sealed chamber accommodated 6 ml of CO2- full-length E1A cDNA into the expression vector pEGFP-C2 (Clontech equilibrated JMEM or DMEM medium; which maintains the cells in Laboratories, Palo Alto CA). HEp-2 and U2OS cells stably expressing a buffered environment at 37°C during the course of an experiment. GFP-PML I or GFP-PML IV (a gift from J. Taylor, Medical College For experiments involving transient transfection, cells expressing low of Wisconsin) were cultured in 0.5 mg/ml or 1.5 mg/ml G418, levels of GFP-PML IV were selected, imaged, and the locations of respectively, in DMEM. GFP-PML I/IV stable cells produce PML these cells were marked on the cover slips with a high resolution grid. bodies in size, composition (e.g. Sp100) and number comparable to To heat shock the cells the chamber was placed in a 43°C water bath that of naive cells. Infections of this cell line with Herpes virus or for 30 minutes and then returned to the microscope for imaging, or transfection with ICP0 leads to the complete disruption of PML bodies, shocked directly on the stage using a stage heater (Leica). This indicating that the levels of PML expression are physiologically procedure was duplicated in experiments using HEp-2 or U2OS cells relevant (J. Taylor, personal communication). stably expressing GFP-PML I/IV. 3-D data sets were collected with Energy depletion studies were conducted by incubating SK-N-SH the upright microscope previously described but fitted with a Wave cells growing on cover slips in JMEM or DMEM with 50 µM carbonyl FX spinning disk confocal unit (Quorum Technologies, Inc.) utilizing Dynamic assembly and disassembly of PML bodies 4457 a Yokagawa dual disk confocal head. We used the 488 nm line of a multi-line argon laser and an excitation/emission filter wheel appropriate for GFP. Integrated intensities of PML and SUMO-1 signals were measured for PML bodies, PML remnants and microstructures. Integrated intensity values were defined as (mean immunofluorescence signal intensity measured over the structure minus the mean intensity in the surrounding background) multiplied by the area of the structure. If the average SUMO-1 signal over a microstructure that contains the lowest SUMO-1 levels measured in a particular cell was less than the surrounding background region, the resulting negative signal was used to normalize the SUMO-1 signals in that cell, so that a value of 1 was obtained for the mean signal intensity of that microstructure. This precluded calculating an infinite ratio of PML:SUMO-1.

Correlative fluorescence microscopy and transmission electron microscopy Following immunolabeling, SK-N-SH cells were post-fixed for 5 minutes in 2% gluteraldehyde/PBS (pH 7.5), followed by dehydration in consecutive graded steps of ethanol (30%, 50%, 70%, 95% and absolute ethanol) at room temperature for 15 minutes at each step. Cells were then embedded in Quetol 651 (Electron Microscopy Sciences) following the instructions supplied with the resin. Small blocks of Quetol 651 containing cells previously identified and marked (Ren et al., 2003), were glued to bullets and sectioned to the desired thickness using an ultramicrotome (Leica Microsystems). Serial sections were collected on 400 mesh copper grids (Electron Microscopy Sciences). Sections on grids were viewed with the fluorescence microscope and images of the regions of interest of specific cells were collected. These regions of the section were then imaged at the ultrastructural level at 200 kV in the transmission electron microscope (Tecnai 20, FEI). Energy filtered images were collected using a post-column imaging filter (Gatan) as described elsewhere (Bazett-Jones and Hendzel, 1999; Boisvert et al., 2000).

Results Heat stress, heavy metal exposure and expression of adenovirus E1A causes PML bodies to partially disassemble to form PML-containing microstructures Cellular stresses can lead to a decrease in the number and size of PML bodies and the formation of smaller PML-containing complexes that we refer to as ‘microstructures’. For example, +2 Fig. 1. Immunofluorescence of stressed cells and western blot HEp-2 cells treated with Cd ions produce microstructures analysis of protein extracts. (A) Unstressed (Control) cells, cells heat (Maul et al., 1995; Nefkens et al., 2003). Microstructures are shocked (+HS) at 42°C for 60 minutes, cells treated with cadmium also observed when a variety of viral proteins are expressed, 50µM (+Cd) for 2 hours and cells transfected with E1A (E1A) for 12 including the Herpes Simplex early viral protein ICPO (Maul hours, were fixed and immunolabeled for PML. Some et al., 1995). To study the formation of these structures in live microstructures are indicated by arrows. (B) Unstressed cells (–HS) cells, we first determined the conditions under which and cells that were heat shocked at 43°C for 30 minutes (+HS) were microstructures would form. We stressed SK-N-SH and U2OS immunolabeled for PML and HSP70. Note the increased levels of cells by either heat shock at 42°C for 1 hour, exposure to Cd+2 HSP70 and the presence of microstructures in cells that were heat at 50 µM for 2 hours, or 12 hours of adenovirus type 5 E1A shocked. (C) Western blot analysis of protein extracts made from protein expression (Fig. 1A). Under all of these conditions, control (–HS) cells and cells heat shocked at 43°C for 30 minutes (+HS). Arrow indicates the specific bands corresponding to HSP70. microstructures were observed by immunofluorescence. This Lower band is of non-specific activity, indicating that the increase in is significant because diverse conditions, such as HSP70 is not due to unequal loading. Full image widths of environmental and viral protein-induced stress, lead to the micrographs correspond to 15 µm. same morphological effect on PML bodies. Under heat shock conditions, stably transfected U2OS or HEp-2 cells expressing GFP-PML I (882 aa) or GFP-PML IV (633 aa) [PML isoforms will form microstructures. In contrast, only nomenclature described by Jensen et al. (Jensen et al., 2001)], approximately 5% of transfected cells generate microstructures or transiently transfected SK-N-SH cells expressing GFP-PML under these heat stress conditions. We found, however, that a IV or DSred-PML IV were initially performed at 42°C for 1 heat shock at 43°C for 30 minutes was sufficient to generate hour. Over 90% of cells that express normal levels of all PML microstructures in >90% of cells transiently or stably 4458 Journal of Cell Science 116 (21) expressing exogenous copies of PML I or PML IV. Changes indicated a typical heat stress response (Morimoto, 1993). in the expression pattern of HSP 70 detected by Moreover, these heat shock conditions did not affect cell immunofluorescence (Fig. 1B), as well as increased levels, survival, since approximately 95% of cells survived the determined by western blot analysis of protein extracts from treatment (data not shown). cells that were heat shocked with this protocol (Fig. 1C) Heat stress was more suited than cadmium exposure or E1A expression for studying the dynamic properties of microstructures mainly because heat stress is immediately reversible. Although cadmium stress is reversible, the precise timing of recovery is indeterminate because of the unknown time required to wash Cd+2 out of cells. With heat stress, recovery begins immediately following a return to normal growth conditions.

Microstructures are generated from parental PML bodies We wished to determine the origin of the PML-containing microstructures. One possibility is that they arise directly from ‘parental’ PML bodies. Alternatively, the microstructures may form by accumulation or aggregation of molecular PML from the nucleoplasm. We measured the GFP signal intensities in single unprocessed 2-D images of a PML body before and after heat shock. For more than 30 PML bodies measured, we observed that the GFP-PML signal intensity dropped dramatically. In cells either transiently expressing GFP-PML IV (data not shown) or stably expressing GFP-PML I (Fig. 2A), we observed that PML bodies lost from 30% to 70% of their GFP signal intensity, with an average loss of approximately 50%. The nucleoplasmic background measured over the entire nuclear area outside PML body remnants, which includes signal from microstructures, increased by approximately 5%. This is consistent with the loss of signal from the bodies and indicates that the GFP fluorescence is not labile to exposure to the higher temperature. As cells recovered from the stress, the intensity of the GFP signal in PML bodies increased. To further characterize the origins of PML containing- microstructures, we collected 3-D data sets over time of U2OS cells stably expressing GFP-PML IV following heat shock at 43°C on the microscope stage. Image collection was Fig. 2. Microstructures form as a result of fission events from PML initiated 20 minutes after the induction of the stress stimulus. bodies. (A) HEp-2 cells stably expressing GFP-PML were used to (Fig. 2B; Movie 1, http://jcs.biologists.org/supplemental/). In measure the mean fluorescence signal intensity (arbitrary units) of this example, the PML body marked with an arrow (in I) GFP in PML bodies prior to heat shock (pre), and in PML body appears as a round structure. 40 seconds later (II) a bleb remnants immediately following heat shock at 43°C for 30 minutes appears on the surface and persists at this location for (post), and up to 30 minutes into the recovery phase following the approximately 100 seconds (III), until it is released to the heat shock. Measurements from single optical slices (not deconvolved) for five PML bodies and nucleoplasmic background (×) surrounding nucleoplasm (IV). Examination of this event are shown. Error bars indicate the measurement error, defined as the from different angles reveals that this structure does bud from range obtained from three separate measurements of each object after the PML body itself and does not arise from aggregation of subtraction of its corresponding background. Between 30% and 70% PML from the nucleoplasm. Similar results were obtained of the GFP-PML signal is lost as a result of the stress. Recovery of when GFP-PML IV was expressed transiently, or when GFP- the signal begins to occur following the stress. (B) 3-D PML I and IV were stably expressed in either U2OS or HEp- reconstruction of a PML-containing microstructure budding from a 2 cells. parental PML body. U2OS cells stably expressing GFP-PML IV were heat shocked in an environmental chamber on the stage of the microscope. Z stacks of images were collected consecutively (10 Microstructures are mobile and fuse during recovery seconds/stack capture time). I is a low magnification image of the entire nucleus prior to budding of a microstructure (full field width We then analyzed the movement and fate of both PML- corresponds to 12 µm). The PML body that will bud is indicated containing microstructures and PML body remnants following (arrow). Panels II-IV are high magnification images of the PML body cell stress. Using 2-D and 3-D time-lapse imaging of GFP- shown in I, at time points through the budding process (see Movie 1, PML, we observed that microstructures were mobile entities http://jcs.biologists.org/supplemental/). with dynamic characteristics consistent with constrained Dynamic assembly and disassembly of PML bodies 4459

Fig. 3. Microstructures are mobile within stressed nuclei. (A) The movement of a PML- containing microstructure was characterized in a nucleus of a HEp-2 cell stably expressing GFP-PML I after 1 hour recovery period following heat shock at 43°C for 30 minutes (a movie showing the movement of this microstructure, which is contrast enhanced in A can be seen in Movie 2, http://jcs.biologists.org/supplemental/). (B) Its position was plotted at each time interval (18 seconds, every third frame of the movie), indicated by white diamonds. (C) The cumulated distance of its travel is plotted as a function of time. The total time recorded was 24×18=432 seconds. Three putative domains or regions (I-III) are indicated in both (B) and (C). (D) Mean squared displacement was calculated (Chubb et al., 2002) for slow moving (circles, n=37) and fast moving microstructures (squares, n=10) and plotted against ∆t. The initial slope of the curve was used to determine diffusion constants. Both curves plateau indicating that the diffusion of both sets of microstructures is constrained. 1 pixel2 corresponds to 0.03 µm2. diffusion (see Movies 2 and 3, http://jcs.biologists.org/ E1A expression (Movies 4 and 5, http://jcs.biologists.org/ supplemental/). The movement of these structures, however, supplemental/). was not uniform over time. In the example shown in Fig. 3A,B, To compare the motion of PML-containing microstructures a microstructure moves in relatively short distances between with the movement of other nuclear components, including each time point while in region I, then migrates to region II Cajal bodies and chromatin, we collected 2-D data sets at 1 where it can move longer distances between time points than second intervals. Analysis of the mean squared displacement it could in region I. Finally, it migrates to region III where again (MSD) (Chubb et al., 2002; Platani et al., 2002) revealed it is restricted to smaller distances between each time point. that there were 2 subsets of PML-containing microstructures Our interpretation of this trajectory over time is that the (Fig. 3D). The first appeared to move slowly, with an average microstructure is confined to a nucleoplasmic compartment in diffusion coefficient of 2.9×10–4 µm2/second, comparable to which its mobility is constrained (region I), then it escapes into that of chromatin (Chubb et al., 2002). We conclude later that a more open compartment in which it can move long distances the mobility of such microstructures is dictated by the inter- between time points (region II). Finally, the microstructure chromatin domain in which they are trapped, and corresponds leaves this compartment, but enters a third compartment to the type of movement of a microstructure in regions I and (region III) where once again its mobility is more restricted. A III (Fig. 3B,C). The average diffusion coefficient of a second plot of the cumulative distance traveled as a function of time subset was 1.4×10–3 µm2/second, though some had further describes the mobility of this microstructure (Fig. 3C). instantaneous diffusion constants as high as 5×10–2 It is important to note that in the 648 seconds of this analysis, µm2/second. These microstructures are less constrained by most microstructures are characteristic of those in region I, and local chromatin domains, corresponding to microstructures in only a small fraction of the microstructures display the a nuclear domain-like region II (Fig. 3B,C). Whereas mobility characteristic of region II. Over longer periods of constrained microstructures move with velocities averaging observation (e.g. 30 minutes), however, all microstructures are 50-70 nm/second, the free-moving microstructures can move able to escape such constrained regions and become more at rates up to 0.5 µm in a 1 second interval (Fig. S1, mobile for a period of time. In contrast, PML body remnants http://jcs.biologists.org/supplemental/). remain positionally stable. To better understand the physical constraints that affect the To confirm the broader relevance of microstructure microstructures’ dynamic behavior, we obtained ultrastructural dynamics occurring with heat stress, we observed cells information by correlative fluorescence microscopy and expressing GFP-PML IV that were treated instead with 50 µM analytical electron microscopy (Boisvert et al., 2000; Ren et Cd+2, and cells expressing DSred-PML IV that were stressed al., 2003). Heat shocked SK-N-SH cells were labeled for PML by GFP-E1A expression. Under these conditions, the resulting protein and prepared for electron microscopy. Physical sections microstructures displayed identical characteristics to those in 60 nm in thickness were first imaged by fluorescence heat stressed cells (Fig. 3A,B). Similarly, PML body remnants microscopy to identify PML body remnants and remained positionally stable following Cd+2 exposure or microstructures (Fig. 4A). Nitrogen maps (green, Fig. 4B) were 4460 Journal of Cell Science 116 (21) used to identify the PML body remnants seen in the defined as PML-containing structures that were present in a fluorescence images of the same serial section. Microstructures maximum of two physical sections, thus distinguishing them such as the one labeled ‘a’ could be found in the electron from grazing sections of PML body remnants. Their microscope images by comparing the fluorescence images with morphology and lack of phosphorus frequently make then low and intermediate magnification nitrogen maps and difficult to distinguish from the protein-based architecture of applying triangulation techniques. Microstructures were the nucleoplasm. Microstructure ‘a’ (Fig. 4C), however, was identified by triangulation measurements and could be resolved from other near-by protein- based structures. Phosphorus maps (red) were used to distinguish nucleic acid from protein-based structures. We observed that microstructures are protein-based entities, approximately 40-100 nm in size, containing no detectable levels of phosphorus above nucleoplasmic background. Some of these microstructures occupy large open regions in the nucleoplasm that are devoid of chromatin (outlined in the P map in Fig. 4C). Microstructure mobility in such regions would probably be described by the mobility characterized by region II (Fig. 3), corresponding to the subset of microstructures with the higher diffusion constant (Fig. 3D). The dimensions of microstructures are similar to the diameters of many of the much narrower ‘channels’ and spaces between chromatin fibers throughout the nucleoplasm (indicated by * in Fig. 4C). A microstructure in such regions of the nucleoplasm would appear relatively constrained in the live-cell imaging experiment (region I, Fig. 3), diffusing at the same rate as chromatin.

PML-containing microstructures fuse during recovery but do not Fig. 4. Correlative fluorescence and electron spectroscopic imaging microscopy of heat form new PML bodies shocked cells. (A) Fluorescence images of six serial physical sections were obtained by We then followed the fate of ultramicrotomy (thickness approximately 60 nm) of cells labeled by immunofluorescence microstructures over long time against PML protein (yellow). The sections are numbered 1-6. The PML body remnant intervals as cells recover from stress. 3- indicated by the arrow in the low magnification image of section 1 (left) is also represented in D data sets were collected and the zoomed and rotated image of the same section (right) (the zoomed image was rotated projected into a single plane (Fig. approximately 230°). The light blue structures are nucleoli. A single microstructure (a) is 5A,B). Thus, every PML body remnant detected primarily in section 2 only. (B) Nitrogen map obtained by electron spectroscopic and microstructure could be accounted imaging of section 2 (in A). The upper PML body remnant indicated by the arrow is the same remnant indicated in A. Two nucleolar domains can be seen at the left and right of the field for over the time course. Images were (upper panel). A second PML body remnant, below the one indicated by the arrow, is in the collected before heat shock, center of the box region. This region is shown at higher magnification in the lower panel, immediately after heat shock, and at 5- where the remnant is indicated by an arrowhead. (C) High magnification phosphorus (P) and minute intervals for a further 30 nitrogen maps (N) of the PML body indicated by the arrowhead in the lower section of B. minutes. A slight change in nuclear Comparison of the directions of the arrowheads in B and C indicate the relative rotation of shape, based on the relative position of the images in these panels. A microstructure labeled ‘a’ in the merged P and N maps is the the PML bodies and remnants, was same microstructure referred to in the fluorescence image of section 2 in A. Microstructures observed between the pre- and post- were identified by triangulation by center-to-center measurements of PML-containing heat shock time points, but no further structures in the fluorescence images, relative to other fiduciary objects, such as nucleoli, with shape changes were observed over the comparative measurements made with low, medium and high magnification electron spectroscopic images. Outlines of large open channels devoid of chromatin are shown in the next 30 minutes. We observed that the phosphorus map, and a more concentrated region of chromatin fibers is indicated by am microstructures were able to move asterisk. A microstructure in the open region would be expected to be more mobile than one hundreds of nanometers within the 5- trapped in the region of higher chromatin fiber concentration. Scale bar (shown in B) minute interval (rectangle, Fig. 5A,B). represents 1100 (upper) and 700 (lower) nm in B, and 400 nm in C. Furthermore, microstructures were Dynamic assembly and disassembly of PML bodies 4461

Fig. 5. PML-containing microstructures fuse with each other and PML body remnants during recovery from cell stress. (A) Optical sections of cells were obtained by deconvolution and projected into a single plane. Cells were imaged before heat shock (Pre), immediately following a 30-minute heat shock at 43°C (Post) and at 5-minute intervals for 30 minutes. In the nucleus shown, arrows indicate PML bodies, and their remnants, before and after heat shock, respectively. The squares and rectangles indicate regions shown at higher magnification in B to demonstrate the movement and fusion of microstructures. (B) High magnification images the specified time points (P represents post-heat shock, 5 represents 5 minutes, etc.). Arrowheads indicate pairs of microstructures that eventually fuse during this time course (15 minutes (square), 20 minutes (rectangle)). (C) Microstructures fuse with parental PML bodies in cells recovering from heat shock. U2OS cells stably expressing GFP-PML IV were heat shocked as previously described and allowed to recover for 30 minutes at 37°C. Z-stacks were collected consecutively (13 second/stack capture time). (I) A recovering nucleus with a mobile microstructure (arrow). The following high magnification images demonstrate the microstructure approaching the surface of the PML body (II), making contact with the surface (III) and disappearing into the core of the body (IV). Multiple events identical to this example were observed. In each event, the fusion was observed from many angles and the microstructure is never seen again in the surrounding nucleoplasm, demonstrating that the microstructure did merge with the PML body remnant. (D) PML body position and relative size are conserved. A HEp-2 nucleus of a cell expressing GFP-PML was imaged before heat shock (pre-HS), immediately following heat shock for 30 minutes at 43°C (post-HS) and at hourly intervals. The relative sizes of the PML bodies, as determined by measurements of the integrated signal intensity of the bodies or remnants (1-11) were determined. The images were exposed so that the GFP signal did not saturate the detector; under these conditions, most PML- containing microstructures are not visible in the images. The rank order of size of the bodies from largest to smallest are indicated. At 3 hours, the original rank order (Pre) has been re-established, except the eighth largest does not fully recover, dropping to the tenth position. observed to fuse with each other as they moved through the diffusion or on an energy-dependent molecular motor nucleoplasm (indicated by arrowheads in Fig. 5B). mechanism, we observed microstructure movement during the Quantification of GFP signal also confirmed that the recovery phase following heat shock in cells that were treated microstructures were fusing with each other since the intensity with FCCP and 2′-deoxy-D-glucose to deplete ATP. Under of the structures relative to the background increased over the these conditions, microstructures were as mobile as those in time course. This is demonstrated by three microstructures cells under normal conditions (data not shown), supporting our (indicated in Fig. 5A); the mean signal of the structures labeled conclusions that the mobility of the microstructures is an 1, 2 and 3, increased 5.7, 2.5 and 3.4 fold above background, example of constrained diffusion. respectively, between the post-heat shock and the 30 minute We also observed that microstructures fused with the larger time points. We conclude that the increase in the mean signal positionally stable PML body remnants. Using 3-D intensity occurs as microstructures fuse to produce larger reconstructions of images of U2OS cells stably expressing microstructures during the recovery period. To determine GFP-PML IV at 30 minutes post-heat shock, we observed whether the mobility of the microstructures is based on microstructures merging or fusing into PML body remnants 4462 Journal of Cell Science 116 (21)

(Fig. 5C; Movie 6, http://jcs.biologists.org/supplemental/). In Table 1. Composition of PML-containing structures before the example shown, a microstructure contacts a PML body and after heat shock remnant, and fuses with the remnant over a 13-second time –HS +HS (0 hours) +HS (2 hours) +HS (4 hours) interval. To achieve better temporal resolution of these events, Body 1 3.2 Remnant 1 3.0 Remnant 1 3.7 Remnant 1 2.5 we captured 2-D images at 30 minutes after heat shock (data Body 2 2.4 Remnant 2 2.7 – – not shown). We carefully monitored 25 such fusion events in Body 3 1.3 Remnant 3 2.2 Micro 1 1.6 Micro 1 2.3 22 different cells. In all cases, no microstructure was seen after – Micro 2 1.2 the apparent fusion event. We conclude that once this fusion Micro 1 180 Micro 3 5.0 has occurred, it is irreversible and that the fusion of Micro 2 300 Micro 3 125 microstructures to each other and ultimately to larger PML body remnants is the primary mechanism for the transition of Measurements of the mean integrated intensities for both PML and SUMO PML body remnants back to mature and fully functional PML were taken for PML bodies, remnants (Fig. 6, arrows) and microstructures bodies. (Fig. 6, arrowheads) at the indicated time points for heat shock and recovery. The measurements are expressed as the relative ratios of PML:SUMO If PML bodies were random accumulations of PML and (arbitrary units). other proteins, we would expect that following heat shock and subsequent recovery, the liberated PML microstructures might nucleate and create new PML bodies at new nuclear locations. on extraction protocols (e.g. western blot analysis). SUMO-1 To address this possibility, we examined more than 40 transient has been found to be covalently attached to PML protein and and stable GFP-PML-expressing cells prior to, and up to 4 has been implicated in PML body stability (Muller et al., 1997; hours following, heat shock. We observed that PML bodies Sternsdorff et al., 1997; Goodson et al., 2001). We found that were positionally stable over the entire time course (Fig. 5D), the PML body remnants maintained high levels of SUMO-1 after accounting for minor global shape changes of the nucleus. immediately following both heat and Cd+2 stress, whereas the Importantly, no new PML bodies were observed. A random microstructures had no detectable levels of SUMO-1 aggregation of PML liberated from ‘parental’ PML bodies does accumulation (Fig. 6A,B). Line scans of PML and SUMO-1 not occur. Since approximately 50% of the GFP-PML signal signals across PML body remnants and microstructures (Fig. is lost from the parental bodies, a cell with 10 PML bodies S2, http://jcs.biologists.org/supplemental/) clearly showed that prior to heat shock would be expected to potentially generate quantification of the relative PML and SUMO-1 levels as 5 new PML bodies after recovery, if the formation was driven detected by immunofluorescence was feasible (Tables 1, 2). by a random aggregation of excess . More Similarly, microstructures formed by E1A expression importantly, the rank order of the relative sizes of the PML contained no detectable SUMO-1 (not shown). The presence bodies after 3 hours recovery is frequently the same as that of SUMO-1 in the remnants indicates that either PML and/or before heat shock. Not only is the nuclear position of the PML other components are modified by SUMO-1 following heat body determined, but the size also appears to be pre- stress. After PML, the most prevalent SUMO-1 modified determined. To illustrate this, the rank size order, based on the protein in PML bodies is Sp100. Since most PML body integrated intensity of the GFP signal in a cell stably expressing remnants (and microstructures) contained little or no Sp100 GFP-PML, was obtained for 11 PML bodies as a function of (not shown), the likely target for SUMO-1 modification is PML time following the stress. Immediately following heat stress protein itself. Furthermore, SUMO-1/PML levels remain high (Fig. 5D, postHS), the rank order was scrambled. Following 3 in the PML body remnants, yet SUMO-1 is undetected in the hours of recovery, however, the original size order was microstructures immediately following the stress. essentially restored, with the exception that the eighth largest We then asked whether SUMO-1 modifications are involved remnant did not fully recover, dropping to the tenth position in in the re-assembly of PML bodies through the observed fusion the rank order (Fig. 5D). In 16 of 19 such cells, the rank order of microstructures during the stress recovery phase. In contrast was completely preserved following recovery. In each of three to observations immediately following stress, at 2 hours (not cells, a pair of PML bodies exchanged positions in their rank shown) and 4 hours post-stress microstructures contained high order of size. No cells were observed where more than a single pair of bodies underwent a rank order inversion. We conclude Table 2. Composition of PML-containing microstructures that both the size and location of PML bodies may represent a before and after 2 hours of Cd+2 stress regulated event, and that PML bodies are not random accumulations of PML and other associated proteins. –Cd +Cd (cell 1) +Cd (cell 2) +Cd (cell 3) Body 1 3.3 Remnant 1 5.3 Remnant 1 6.8 Remnant 1 2.6 Body 2 2.8 Remnant 2 4.4 Remnant 2 2.8 Remnant 2 3.3 Biochemical composition of microstructures indicates a Body 3 4.6 Remnant 3 3.2 Remnant 3 3.4 Remnant 3 3.3 role for SUMO-1 modifications in PML body stability Body 4 2.7 – – – Body 5 3.0 Micro 1 57 Micro 1 42 Micro 1 71 We wished to relate the structure and dynamic behavior of Body 6 3.3 Micro 2 9 Micro 2 7.0 Micro 2 15 PML-containing entities before stress and during recovery Body 7 1.8 Micro 3 37 Micro 3 26 Micro 3 27 to their biochemical composition. Immunofluorescence Body 8 2.6 Micro 4 33 microscopy was used to measure subtle biochemical Measurements of the mean integrated intensities for both PML and SUMO differences between the various PML-containing structures were taken for PML bodies of a control cell (–Cd), and of PML body within single cells. This approach provided the spatial remnants (Fig. 6, arrows) and microstructures (Fig. 6, arrowheads) in three resolution and hence the body-to-body variability that cannot cells following 2 hours of exposure to Cd+2. The values are the relative ratios be obtained by conventional biochemical techniques that rely of PML:SUMO (arbitrary units). Dynamic assembly and disassembly of PML bodies 4463 levels of SUMO-1 (Fig. 6A, Table 1). We conclude that SUMO-1 plays a role in the re-assembly fusion mechanism of PML body recovery. Further support for SUMO-1 involvement in PML body stability and assembly was obtained with cells over-expressing GFP-SUMO-1. We observed that GFP-SUMO-1 expression prevented the formation of PML- containing microstructures in SK-N-SH cells that were heat shocked at 43°C for 30 minutes, or stressed by 50 µM Cd+2 for 2 hours (Fig. 7). Protection against microstructure formation probably occurs by a shift in the equilibrium of PML modification towards the SUMOylated form. Since increased levels of SUMO- 1 prevent stress-induced disassembly of PML bodies, we conclude that SUMO-1, probably through PML, or through another unidentified SUMO-modified protein, plays a key role in regulating PML body integrity. The mechanism by which SUMOylation maintains this integrity, and the mechanisms involved in modulating SUMOylation levels in response to cellular events such as heat shock, remain to be elucidated.

Discussion Evidence for supramolecular assembly/disassembly of PML bodies Following periods of cellular stress, global levels of transcription are greatly reduced, and PML bodies are disrupted, giving rise to microstructures in the nucleoplasm (Fig. 1). Although we cannot discount that molecular PML may be released from sites other than PML bodies during stress, we have observed PML containing microstructures ‘budding’ from parental bodies (Fig. 2). These fission events indicate Fig. 6. Co-localization of PML and SUMO-1. (A) PML, and SUMO-1 were immunolabeled in control cells (–HS), cells heat shocked for 30 minutes at that PML found in PML microstructures originates 43°C (0H), after a recovery period of 4 hours (4H) or immediately following primarily from PML bodies rather than the Cd+2 stress (50 µM for 2 hours). PML bodies or PML body remnants are nucleoplasm. The newly formed microstructures lack indicated by arrows, and PML-containing microstructures are indicated by Sp100 and SUMO-1, are mobile within the arrowheads. (B) All 8 PML bodies in –HS were analyzed. Quantification of nucleoplasm, and move up to 0.5 µm in a 1-second these structures is presented in Tables 1 and 2; the bodies, remnants or interval, whereas PML body remnants and PML microstructures described in the tables correspond to the indicated structures, bodies remain positionally stable over extended numbered in order from top to bottom in the respective image. periods of time (Fig. 3). During the recovery phase, microstructures collide with each other and have the propensity to fuse, creating larger function, such as transcriptional regulation. In the passive microstructures. These, in turn, fuse directly with the PML constrained diffusion model, molecular and/or supra-molecular body remnants (Fig. 5). This behavior indicates that PML PML microstructures released during stress are confined to a bodies are not a uniform, homogeneous ‘polymer’. Instead, particular domain or region of the nucleus by local chromatin PML bodies may be composed of units or modules that are organization, and periodically fuse to form larger linked together as supramolecular assemblies, a characteristic microstructures. When these microstructures are permissive for of proteins containing the RING domain, such as PML (Kentsis fusion with parental PML bodies (perhaps involving changes et al., 2002). During the recovery phase, microstructures do not in SUMOylation levels), they fuse by constrained diffusion fuse with each in order to create new PML bodies in new with the nearest PML body within that region of the nucleus. locations. Moreover, after significant loss of PML protein from Thus, PML body size during recovery is a function of (1) the the bodies as a result of stress, an underlying mechanism local molecular or supra-molecular concentration of PML body dictates the size of each body, since the relative sizes of the components found within a particular region or domain of the bodies are conserved between the pre-stressed state and after nucleus, and (2) the size of the inter-chromatin space in which recovery (Fig. 5). The physico-chemical basis of PML body the parental PML body is found. size conservation could be a passive constrained diffusion The second model predicts that the size and positional mechanism and/or an active recruitment mechanism of PML conservation of PML bodies are based on an active mechanism, body components in response to some underlying biological dictated by the underlying biological function(s) of the PML 4464 Journal of Cell Science 116 (21) body remnant after stress recovery, such as the transcriptional It appears that the presence of SUMO-1, is responsible for regulation of the chromatin found in its vicinity (Boisvert et PML body integrity. PML proteins with mutations that remove al., 2000). We have observed that PML microstructures can the SUMOylated residues are targeted to the nucleus but not move large distances within the nucleus. Therefore, it is to PML bodies (Zhong et al., 2000). A decrease in the amount possible that PML body components could redistribute of SUMO-1 in PML body remnants was observed immediately throughout the entire nuclear volume during stress recovery. following heat shock, and no detectable SUMO-1 was The consequence would be a lack of conservation of PML body associated with microstructures following heat stress, Cd+2 size. Regardless of whether an active or a passive recruitment exposure or with E1A expression (Fig. 6). During recovery, process is involved, it is clear that the formation of PML bodies however, levels of SUMO-1 increased within microstructures, is not based on a random aggregation of excess PML protein. corresponding to the time when fusion events were frequently If PML bodies act only as storage sites or sites of post- observed. Further support for a role for SUMO-1 in stabilizing translational modifications of body components, such as CBP PML body structure was obtained when GFP-SUMO-1 was and p53 (Fogal et al., 2000), then the relative size of PML transiently over-expressed. Increased levels of SUMO-1 bodies would not be expected to be conserved, nor show prevented the formation of microstructures in cells heat positional stability. Because our observations support shocked at 43°C for 30 minutes or in cells stressed by 50 µM conservation of size and position, we favor a recruitment Cd+2 (Fig. 7). We suggest that the mechanism of stress-induced mechanism that reflects the activity of the specific chromatin disassembly and subsequent re-formation of PML bodies domains that surround each body. For example, the recruitment involves a shift in the equilibrium of SUMO-1 modification of of transcriptional co-activators, such as CBP (LaMorte et al., PML and/or other PML components. This is consistent with 1998) may create a domain enriched in acetylated chromatin the involvement of a SUMO protease in PML body and other factors, thus creating a favorable environment for composition and integrity (Best et al., 2002). It has been transcriptional regulation (Boisvert et al., 2001). We suggest reported that SUMO-1 may be cleaved from PML protein once that the pre-determined locations reflect an underlying protein- it is incorporated into PML bodies (Maul et al., 2000). Since based architecture that may arise within an inter-chromatin we observed SUMO-1 localization in PML body remnants that domain in response to one or more of the putative functions of had dramatically decreased levels of Sp100, we propose that the PML body. PML is still modified by SUMO-1 after PML deposition at PML bodies. However, it remains to be determined whether the loss of SUMO-1 causes the release of PML protein from PML bodies, or if the release of PML protein results in de- SUMOylation.

PML-containing microstructures move by constrained diffusion in the nucleoplasm Some of the dynamic characteristics of PML bodies are similar to those of other nuclear sub- domains. For example, we have demonstrated that under stress conditions PML bodies undergo fission/blebbing and fusion/rejoining events, which occurs with both interchromatin granule clusters (IGCs) (Misteli et al., 1997; Kruhlak et al., 2000) and Cajal bodies (Platani et al., 2000). Whereas IGCs and PML bodies appear to be positionally stable, Cajal bodies move with a velocity of approximately 10-15 nm/second (Platani et al., 2000). However, in this study we identified 2 subsets of PML-containing microstructures that can be distinguished with respect to mobility. Our interpretation is that one subset of microstructures are trapped within pockets of chromatin and, therefore, their diffusion constants are similar to that of mobile chromatin domains (Marshall et al., 1997; Chubb et al., 2002). In these domains, the microstructures exhibit an average velocity of 50- Fig. 7. GFP-SUMO-1 expression in heat stressed and Cd+2 stressed cells. SK-N-SH cells transiently expressing GFP-SUMO-1 were heat shocked for 30 minutes at 70 nm/second and a diffusion constant of × –4 µ 2 43°C or U2OS cells stably expressing GFP-PML IV treated with 50 µM Cd+2 were 2.9 10 m /second. From the physical immunolabeled with antibodies against PML. Cells expressing GFP-SUMO-1 are dimensions of microstructures measured by ESI indicated with large arrows. PML bodies or PML body remnants are indicated with (40-100 nm; Fig. 4), we predict a molecular mass small arrows, and microstructures with arrowheads. of 0.5-5 MDa. This places them in the same size Dynamic assembly and disassembly of PML bodies 4465 range of many multi-subunit molecular complexes such as the References basal transcription apparatus, chromatin remodeling Bandobashi, K., Maeda, A., Teramoto, N., Nagy, N., Szekely, L., Taguchi, complexes and spliceosomes. We suggest that the motion of H., Miyoshi, I., Klein, G. and Klein, E. (2001). Intranuclear localization of the transcription coadaptor CBP/p300 and the transcription factor RBP- PML-containing microstructures may represent a paradigm for Jk in relation to EBNA-2 and -5 in B lymphocytes. Virology 30, 275-282. the dynamic behavior of other large complexes in intranuclear Bazett-Jones, D. P. and Hendzel, M. J. (1999). Electron spectroscopic trafficking. The second subset of microstructures may occupy imaging of chromatin. Methods 17, 188-200. large, chromatin-free channels which allows for diffusion Best, J. L., Ganiatsus, S., Agarwal, S., Changou, A., Salomoni, P., Shirihai, O., Meluh, P. B., Pandolfi, P. P. and Zon, L. I. (2002). SUMO-1 Protease- constants that are approximately an order of magnitude greater 1 regulates gene transcription through PML. Mol. Cell 10, 843-855. than those in the first subset; such microstructures have been Boisvert, F.-M., Hendzel, M. J. and Bazett-Jones, D. P. (2000). observed to move 0.5 µm in 1 second. The energy-independent Promyelocytic Leukemia (PML) nuclear bodies are protein structures that movement of microstructures is consistent with a lack of do not accumulate RNA. J. Cell Biol. 148, 283-292. Boisvert, F. M., Kruhlak, M. J., Box, A. K., Hendzel, M. J. and Bazett- functional contacts with other nuclear structures, in contrast to Jones, D. P. (2001). The transcription coactivator CBP is a dynamic the , whose movement is thought to be constrained component of the promyelocytic leukemia nuclear body. J. Cell Biol. 152, by functional interactions with chromatin (Platani et al., 2000; 1099-1106. Platani et al., 2002). The structures can move very rapidly until Chubb, J. R., Boyle, S., Perry, P. and Bickmore, W. A. (2002). Chromatin motion is constrained by association with nuclear compartments in human they become trapped within nuclear sub-domains. Frequently, cells. Curr. Biol. 12, 439-445. microstructures ‘escape’ through openings within the Chubb, J. R. and Bickmore, W. A. (2003). Considering nuclear nucleoplasm and are able to travel large distances in short time compartmentalization in the light of nuclear dynamics. Cell 112, 403-406. intervals, before once again becoming trapped, probably within de Jong, L., Grande, M. A., Mattern K. A., Schul, W. and van Driel, R. (1996). Nuclear domains involved in RNA synthesis, RNA processing, and pockets of chromatin. Since the movement of PML-containing replication. Rev. Eukaryot. Gene Expr. 6, 215-246. microstructures is energy-independent, the mobility is Doucas, V., Tini, M., Egan, D. A. and Evans, R. M. (1999). Modulation of characteristic of constrained diffusion. CREB binding protein function by the promyelocytic (PML) oncoprotein Chromatin dynamics is an important consideration in suggests a role for nuclear bodies in hormone signaling. Proc. Natl. Acad. Sci. USA 96, 2627-2632. understanding nuclear function (Chubb and Bickmore, 2003; Eskiw, C. H. and Bazett-Jones, D. P. (2002). The promyelocytic leukemia Marshall, 2002). In addition, however, we propose that the nuclear body: sites of activity? Biochem. Cell Biol. 80, 301-310. dynamic behaviour of specialized protein-based Fogal, V., Gostissa, M., Sandy, P., Zacchi, P., Sternsdorf, T., Jensen, K., compartments, such as the PML body, may also have Pandolfi, P. P., Will, H., Schneider, C. and Del Sal, G. (2000). Regulation of p53 activity in nuclear bodies by a specific PML isoform. EMBO. 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J. bodies, such as Cajal bodies (Platani et al., 2002), and for large Cell Biol. 150, 41-51. supramolecular complexes with specialized functions, LaMorte, V. J., Dyck, J. A., Ochs, R. L. and Evans, R. M. (1998). Localization of nascent RNA and CREB binding protein with the PML- including transcription initiation, chromatin remodeling, DNA containing nuclear body. Proc. Natl. Acad. Sci. USA 95, 4991-4996. repair, recombination and replication. Marshall, K. R., Rowley, K. V., Rinaldi, A., Nicholson, I. P., Ishov, A. M., Maul, G. G. and Preston, C. M. (2002). Activity and intracellular We thank Ying Ren and Ren Li for excellent technical assistance. localization of the human cytomegalovirus protein pp71. J. Gen. Virol. 83, We thank Dr Roel van Driel for the gift of the 5E10 PML antibody, 1601-1612. Dr R. Evans for the PML expression vector, and Dr Dean Jackson for Marshall, W. F., Straight, A., Marko, J. F., Swedlow, J., Dernburg, A., the protocol for labeling nascent transcripts with 5′-fluorouridine. We Belmont, A., Murray, A. W., Agard, D. A. and Sedat, J. W. (1997). Interphase chromosomes undergo constrained diffusional motion in living thank Dr J. Taylor for the stable cell lines expressing PML I and IV cells. Curr. Biol. 7, 930-939. and for providing characterization information. We also thank Dr J. Maul, G. G., Yu, E., Ishov, A. M. and Epstein, A. L. (1995). Nuclear domain R. Chubb for advice on the mean squared displacement analysis. We 10 (ND10) associated proteins are also present in nuclear bodies and would especially like to thank Mr Reg Sidhu and Dr Robin Battye redistribute to hundreds of nuclear sites after stress. J. Cell Biochem. 59, (Quorum Technologies Inc.) for the assistance and use of the Wave 498-513. FX spinning disk confocal unit in the collection of 3-D dynamic data. Maul, G. G., Negorev, D., Bell, P. and Ishov, A. M. (2000). Review: G.D. is a Senior Postdoctoral Fellow of the Canadian Institutes of properties and assembly mechanisms of ND10, PML bodies, or PODs. J. Struct. Biol. 129, 278-287. Health Research. J.S.M. is a Scholar of the Canadian Institutes of Misteli, T. (2001). Protein dynamics:implications for nuclear architecture and Health Research. The research was funded by an operating grant from gene expression. Science 291, 843-847. The Cancer Research Society, Inc. D.P.B.-J. is the recipient of a Misteli, T., Caceres, J. F. and Spector, D. (1997). The dynamics of a pre- Canada Research Chair in Molecular and Cellular Imaging. mRNA splicing factor in living cells. Nature 387, 523-527. 4466 Journal of Cell Science 116 (21)

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