New Records of Cold-Water Corals from Korea
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
A Time-Calibrated Molecular Phylogeny of the Precious Corals: Reconciling Discrepancies in the Taxonomic Classification and Insights Into Their Evolutionary History
A time-calibrated molecular phylogeny of the precious corals: reconciling discrepancies in the taxonomic classification and insights into their evolutionary history The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Ardila, Néstor E, Gonzalo Giribet, and Juan A Sánchez. 2012. A time- calibrated molecular phylogeny of the precious corals: reconciling discrepancies in the taxonomic classification and insights into their evolutionary history. BMC Evolutionary Biology 12: 246. Published Version doi:10.1186/1471-2148-12-246 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:11802886 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA A time-calibrated molecular phylogeny of the precious corals: reconciling discrepancies in the taxonomic classification and insights into their evolutionary history Ardila et al. Ardila et al. BMC Evolutionary Biology 2012, 12:246 http://www.biomedcentral.com/1471-2148/12/246 Ardila et al. BMC Evolutionary Biology 2012, 12:246 http://www.biomedcentral.com/1471-2148/12/246 RESEARCH ARTICLE Open Access A time-calibrated molecular phylogeny of the precious corals: reconciling discrepancies in the taxonomic classification and insights into their evolutionary history Néstor E Ardila1,3, Gonzalo Giribet2 and Juan A Sánchez1* Abstract Background: Seamount-associated faunas are often considered highly endemic but isolation and diversification processes leading to such endemism have been poorly documented at those depths. -
Habitat-Forming Deep-Sea Corals in the Northeast Pacific Ocean
Habitat-forming deep-sea corals in the Northeast Pacific Ocean Peter Etnoyer1, Lance E. Morgan2 1 Aquanautix Consulting, 3777 Griffith View Drive, Los Angeles, CA 90039, USA ([email protected]) 2 Marine Conservation Biology Institute, 4878 Warm Springs Rd., Glen Ellen, CA 95442, USA Abstract. We define habitat-forming deep-sea corals as those families of octocorals, hexacorals, and stylasterids with species that live deeper than 200 m, with a majority of species exhibiting complex branching morphology and a sufficient size to provide substrata or refugia to associated species. We present 2,649 records (name, geoposition, depth, and data quality) from eleven institutions on eight habitat- forming deep-sea coral families, including octocorals in the families Coralliidae, Isididae, Paragorgiidae and Primnoidae, hexacorals in the families Antipathidae, Oculinidae and Caryophylliidae, and stylasterids in the family Stylasteridae. The data are ranked according to record quality. We compare family range and distribution as predicted by historical records to the family extent as informed by recent collections aboard the National Oceanic of Atmospheric Administration (NOAA) Office of Ocean Exploration 2002 Gulf of Alaska Seamount Expedition (GOASEX). We present a map of one of these families, the Primnoidae. We find that these habitat-forming families are widespread throughout the Northeast Pacific, save Caryophylliidae (Lophelia sp.) and Oculinidae (Madrepora sp.), which are limited in occurrence. Most coral records fall on the continental shelves, in Alaska, or Hawaii, likely reflecting research effort. The vertical range of these families, based on large samples (N >200), is impressive. Four families have maximum-recorded depths deeper than 1500 m, and minimum depths shallower than 40 m. -
Tree Coral, Primnoa Pacifica
Sexual Reproduction and Seasonality of the Alaskan Red Tree Coral, Primnoa pacifica Rhian G. Waller1*, Robert P. Stone2, Julia Johnstone3, Jennifer Mondragon4 1 University of Maine, School of Marine Sciences, Darling Marine Center, Walpole, Maine, United States of America, 2 Alaska Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Juneau, Alaska, United States of America, 3 University of Maine, Darling Marine Center, Walpole, Maine, United States of America, 4 Alaska Regional Office, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Juneau, Alaska, United States of America Abstract The red tree coral Primnoa pacifica is an important habitat forming octocoral in North Pacific waters. Given the prominence of this species in shelf and upper slope areas of the Gulf of Alaska where fishing disturbance can be high, it may be able to sustain healthy populations through adaptive reproductive processes. This study was designed to test this hypothesis, examining reproductive mode, seasonality and fecundity in both undamaged and simulated damaged colonies over the course of 16 months using a deepwater-emerged population in Tracy Arm Fjord. Females within the population developed asynchronously, though males showed trends of synchronicity, with production of immature spermatocysts heightened in December/January and maturation of gametes in the fall months. Periodicity of individuals varied from a single year reproductive event to some individuals taking more than the 16 months sampled to produce viable gametes. Multiple stages of gametes occurred in polyps of the same colony during most sampling periods. Mean oocyte size ranged from 50 to 200 mm in any season, and maximum oocyte size (802 mm) suggests a lecithotrophic larva. -
(1880, Pp. 83-88) Published a "List of All the Species O
LIST OF THE DESCRIBED SPECIES OF THE ORDER STYLASTERINA by H. BOSCHMA Moseley (1880, pp. 83-88) published a "List of all the Species of Stylaste- ridae at present known", remarking that this list is not to be regarded as constituting a revision of the species, but represents an attempt to draw attention to all the species of which an account has been published. This list, which was prepared with the assistance of Dr. F. Brüggemann, of the British Museum, contains sixty species, arranged in twelve genera. The present list contains about one hundred described species of Stylaste- rina in addition to those mentioned by Moseley. Here again the genera are arranged according to the apparently natural system, while within each genus the species are placed in alphabetical order, an arbitrary arrangement being indicated because generally too little is known about the relationship of the different forms, even when representing species with well-defined characters. In the present paper the data are compiled in the manner of lists of synonyms, with notes indicating the geographical distribution or pointing to apparent mistakes. These lists of names are partly based on data that cannot be checked with respect to their reliability; therefore, numerous mis- identifications are included. Only evident errors are expressly noted. When the identity of a described species with an earlier described form has been fully established, the former has been placed in the synonymy of the latter; when definite proof seems to be lacking it is noted in square brackets that a certain author has the opinion that one name is a synonym of another. -
Volume 2. Animals
AC20 Doc. 8.5 Annex (English only/Seulement en anglais/Únicamente en inglés) REVIEW OF SIGNIFICANT TRADE ANALYSIS OF TRADE TRENDS WITH NOTES ON THE CONSERVATION STATUS OF SELECTED SPECIES Volume 2. Animals Prepared for the CITES Animals Committee, CITES Secretariat by the United Nations Environment Programme World Conservation Monitoring Centre JANUARY 2004 AC20 Doc. 8.5 – p. 3 Prepared and produced by: UNEP World Conservation Monitoring Centre, Cambridge, UK UNEP WORLD CONSERVATION MONITORING CENTRE (UNEP-WCMC) www.unep-wcmc.org The UNEP World Conservation Monitoring Centre is the biodiversity assessment and policy implementation arm of the United Nations Environment Programme, the world’s foremost intergovernmental environmental organisation. UNEP-WCMC aims to help decision-makers recognise the value of biodiversity to people everywhere, and to apply this knowledge to all that they do. The Centre’s challenge is to transform complex data into policy-relevant information, to build tools and systems for analysis and integration, and to support the needs of nations and the international community as they engage in joint programmes of action. UNEP-WCMC provides objective, scientifically rigorous products and services that include ecosystem assessments, support for implementation of environmental agreements, regional and global biodiversity information, research on threats and impacts, and development of future scenarios for the living world. Prepared for: The CITES Secretariat, Geneva A contribution to UNEP - The United Nations Environment Programme Printed by: UNEP World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge CB3 0DL, UK © Copyright: UNEP World Conservation Monitoring Centre/CITES Secretariat The contents of this report do not necessarily reflect the views or policies of UNEP or contributory organisations. -
Genetic Divergence and Polyphyly in the Octocoral Genus Swiftia [Cnidaria: Octocorallia], Including a Species Impacted by the DWH Oil Spill
diversity Article Genetic Divergence and Polyphyly in the Octocoral Genus Swiftia [Cnidaria: Octocorallia], Including a Species Impacted by the DWH Oil Spill Janessy Frometa 1,2,* , Peter J. Etnoyer 2, Andrea M. Quattrini 3, Santiago Herrera 4 and Thomas W. Greig 2 1 CSS Dynamac, Inc., 10301 Democracy Lane, Suite 300, Fairfax, VA 22030, USA 2 Hollings Marine Laboratory, NOAA National Centers for Coastal Ocean Sciences, National Ocean Service, National Oceanic and Atmospheric Administration, 331 Fort Johnson Rd, Charleston, SC 29412, USA; [email protected] (P.J.E.); [email protected] (T.W.G.) 3 Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, 10th and Constitution Ave NW, Washington, DC 20560, USA; [email protected] 4 Department of Biological Sciences, Lehigh University, 111 Research Dr, Bethlehem, PA 18015, USA; [email protected] * Correspondence: [email protected] Abstract: Mesophotic coral ecosystems (MCEs) are recognized around the world as diverse and ecologically important habitats. In the northern Gulf of Mexico (GoMx), MCEs are rocky reefs with abundant black corals and octocorals, including the species Swiftia exserta. Surveys following the Deepwater Horizon (DWH) oil spill in 2010 revealed significant injury to these and other species, the restoration of which requires an in-depth understanding of the biology, ecology, and genetic diversity of each species. To support a larger population connectivity study of impacted octocorals in the Citation: Frometa, J.; Etnoyer, P.J.; GoMx, this study combined sequences of mtMutS and nuclear 28S rDNA to confirm the identity Quattrini, A.M.; Herrera, S.; Greig, Swiftia T.W. -
The Effects of In-Vitro Ph Decrease on the Gametogenesis of the Red Tree Coral, Primnoa Pacifica
RESEARCH ARTICLE The effects of in-vitro pH decrease on the gametogenesis of the red tree coral, Primnoa pacifica 1 2 3 Ashley M. RossinID *, Rhian G. Waller , Robert P. Stone 1 University of Alaska Fairbanks, College of Fisheries and Ocean Sciences, Fairbanks, Alaska, United States of America, 2 University of Maine, School of Marine Sciences, Darling Marine Center, Walpole, Maine, United States of America, 3 Alaska Fisheries Science Center, National Marine Fisheries Services, National Oceanic a1111111111 and Atmospheric Administration, Juneau, Alaska, United States of America a1111111111 a1111111111 * [email protected] a1111111111 a1111111111 Abstract Primnoa pacifica is the most ecologically important coral species in the North Pacific Ocean and provides important habitat for commercially important fish and invertebrates. Ocean OPEN ACCESS acidification (OA) is more rapidly increasing in high-latitude seas because anthropogenic Citation: Rossin AM, Waller RG, Stone RP (2019) CO2 uptake is greater in these regions. This is due to the solubility of CO2 in cold water and The effects of in-vitro pH decrease on the the reduced buffering capacity and low alkalinity of colder waters. Primnoa pacifica colonies gametogenesis of the red tree coral, Primnoa pacifica. PLoS ONE 14(4): e0203976. https://doi. were cultured for six to nine months in either pH 7.55 (predicted Year 2100 pH levels) or pH org/10.1371/journal.pone.0203976 7.75 (Control). Oocyte development and fecundity in females, and spermatocyst stages in Editor: Erik Caroselli, University of Bologna, ITALY males were measured to assess the effects of pH on gametogenesis. Oocyte diameters were 13.6% smaller and fecundities were 30.9% lower in the Year 2100 samples. -
New Species of Stylasterid (Cnidaria: Hydrozoa: Anthoathecata: Stylasteridae) from the Northwestern Hawaiian Islands Author(S): Stephen D
New Species of Stylasterid (Cnidaria: Hydrozoa: Anthoathecata: Stylasteridae) from the Northwestern Hawaiian Islands Author(s): Stephen D. Cairns Source: Pacific Science, 71(1):77-81. Published By: University of Hawai'i Press DOI: http://dx.doi.org/10.2984/71.1.7 URL: http://www.bioone.org/doi/full/10.2984/71.1.7 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/ terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. New Species of Stylasterid (Cnidaria: Hydrozoa: Anthoathecata: Stylasteridae) from the Northwestern Hawaiian Islands1 Stephen D. Cairns 2 Abstract: A new species of Crypthelia, C. kelleyi, is described from a seamount in the Northwestern Hawaiian Islands, making it the fifth species of stylasterid known from the Hawaiian Islands. Collected at 2,116 m, it is the fourth-deepest stylasterid species known. Once thought to be absent from Hawai- materials and methods ian waters (Boschma 1959), four stylasterid species have been reported from this archi- The specimen was collected on the Okeanos pelago, primarily on seamounts and off small Explorer expedition to the Northwestern islands in the Northwestern Hawaiian Islands Hawaiian Islands, which took place in August at depths of 293 – 583 m (Cairns 2005). -
Deep-Sea Coral Taxa in the U. S. Caribbean Region: Depth And
Deep‐Sea Coral Taxa in the U. S. Caribbean Region: Depth and Geographical Distribution By Stephen D. Cairns1 1. National Museum of Natural History, Smithsonian Institution, Washington, DC An update of the status of the azooxanthellate, heterotrophic coral species that occur predominantly deeper than 50 m in the U.S. Caribbean territories is not given in this volume because of lack of significant additional data. However, an updated list of deep‐sea coral species in Phylum Cnidaria, Classes Anthozoa and Hydrozoa, from the Caribbean region (Figure 1) is presented below. Details are provided on depth ranges and known geographic distributions within the region (Table 1). This list is adapted from Lutz & Ginsburg (2007, Appendix 8.1) in that it is restricted to the U. S. territories in the Caribbean, i.e., Puerto Rico, U. S. Virgin Islands, and Navassa Island, not the entire Caribbean and Bahamian region. Thus, this list is significantly shorter. The list has also been reordered alphabetically by family, rather than species, to be consistent with other regional lists in this volume, and authorship and publication dates have been added. Also, Antipathes americana is now properly assigned to the genus Stylopathes, and Stylaster profundus to the genus Stenohelia. Furthermore, many of the geographic ranges have been clarified and validated. Since 2007 there have been 20 species additions to the U.S. territories list (indicated with blue shading in the list), mostly due to unpublished specimens from NMNH collections. As a result of this update, there are now known to be: 12 species of Antipatharia, 45 species of Scleractinia, 47 species of Octocorallia (three with incomplete taxonomy), and 14 species of Stylasteridae, for a total of 118 species found in the relatively small geographic region of U. -
Curriculum Vitae Santiago Herrera Massachusetts Institute of Technology & Woods Hole Oceanographic Institu
Curriculum Vitae Santiago Herrera CURRENT AFFILIATION Massachusetts Institute of Technology & Woods Hole Oceanographic Institution Shank Molecular Ecology and Evolution Laboratory Woods Hole Oceanographic Institution 2‐40 Redfield Laboratory, MS#33 Woods Hole, MA 02543, USA Phone: +1 508 289 3906 E‐mail: [email protected] OR [email protected] EDUCATION PhD Massachusetts Institute of Technology & Woods Hole Oceanographic Institution Joint Program, MA, USA Biological Oceanography, eXpected 2014 Timothy Shank PhD MS Universidad de los Andes, Bogotá, Colombia Biological Sciences, eXpected 2009 Evolution in the deep ocean: phylogeny of the bubblegum octocorals (Paragorgiidae) and the phylogeography and genetic diversity of Paragorgia arborea (Linnaeus) Juan A. Sánchez PhD BS Universidad de los Andes, Bogotá, Colombia Biology, 2008 Juan A. Sánchez PhD and Santiago Madriñán PhD BS Universidad de los Andes, Bogotá, Colombia Microbiology, 2008 Juan A. Sánchez PhD and Silvia Restrepo PhD RESEARCH INTERESTS Systematics, evolutionary biology, population connectivity, and bio/phylogeography of marine organisms; conservation of coral reefs and deep‐sea ecosystems, worldwide. PROFESSIONAL SOCIETIES Sigma Xi, The Scientific Research Society 2007; Society of Systematic Biologists 2008 Updated June 2009 POSITIONS - Graduated Teaching Assistant and tutor of the Phylogenetic Systematics laboratory, Universidad de los Andes, Bogotá, Colombia. Juan A. Sánchez PhD 2009 - Fellow; Smithsonian Graduate Fellow, National Museum of Natural History, Smithsonian Institution, Invertebrate Zoology Department & Laboratories of Analytical Biology, Washington, DC. Project Title: Connectivity across the deep ocean: phylogeography and morphological variation of the cosmopolitan bubblegum octocoral Paragorgia arborea (Linnaeus). Stephen D. Cairns PhD and Allen G. Collins PhD 20082009 - Intern; United States Antarctic Program, Marine Invertebrate Collections. National Museum of Natural History, Smithsonian Institution, Invertebrate Zoology Department. -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
Rocky Intertidal, Mudflats and Beaches, and Eelgrass Beds
Appendix 5.4, Page 1 Appendix 5.4 Marine and Coastline Habitats Featured Species-associated Intertidal Habitats: Rocky Intertidal, Mudflats and Beaches, and Eelgrass Beds A swath of intertidal habitat occurs wherever the ocean meets the shore. At 44,000 miles, Alaska’s shoreline is more than double the shoreline for the entire Lower 48 states (ACMP 2005). This extensive shoreline creates an impressive abundance and diversity of habitats. Five physical factors predominantly control the distribution and abundance of biota in the intertidal zone: wave energy, bottom type (substrate), tidal exposure, temperature, and most important, salinity (Dethier and Schoch 2000; Ricketts and Calvin 1968). The distribution of many commercially important fishes and crustaceans with particular salinity regimes has led to the description of “salinity zones,” which can be used as a basis for mapping these resources (Bulger et al. 1993; Christensen et al. 1997). A new methodology called SCALE (Shoreline Classification and Landscape Extrapolation) has the ability to separate the roles of sediment type, salinity, wave action, and other factors controlling estuarine community distribution and abundance. This section of Alaska’s CWCS focuses on 3 main types of intertidal habitat: rocky intertidal, mudflats and beaches, and eelgrass beds. Tidal marshes, which are also intertidal habitats, are discussed in the Wetlands section, Appendix 5.3, of the CWCS. Rocky intertidal habitats can be categorized into 3 main types: (1) exposed, rocky shores composed of steeply dipping, vertical bedrock that experience high-to- moderate wave energy; (2) exposed, wave-cut platforms consisting of wave-cut or low-lying bedrock that experience high-to-moderate wave energy; and (3) sheltered, rocky shores composed of vertical rock walls, bedrock outcrops, wide rock platforms, and boulder-strewn ledges and usually found along sheltered bays or along the inside of bays and coves.