Analyzing Pelagic Food Webs Leading to Top Predators in the Pacific Ocean
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Diurnal Patterns in Gulf of Mexico Epipelagic Predator Interactions with Pelagic Longline Gear: Implications for Target Species Catch Rates and Bycatch Mitigation
Bull Mar Sci. 93(2):573–589. 2017 research paper https://doi.org/10.5343/bms.2016.1008 Diurnal patterns in Gulf of Mexico epipelagic predator interactions with pelagic longline gear: implications for target species catch rates and bycatch mitigation 1 National Marine Fisheries Eric S Orbesen 1 * Service, Southeast Fisheries 1 Science Center, 75 Virginia Beach Derke Snodgrass 2 Drive, Miami, Florida 33149. Geoffrey S Shideler 1 2 University of Miami, Rosenstiel Craig A Brown School of Marine & Atmospheric John F Walter 1 Science, 4600 Rickenbacker Causeway, Miami, Florida 33149. * Corresponding author email: <[email protected]>. ABSTRACT.—Bycatch in pelagic longline fisheries is of substantial international concern, and the mitigation of bycatch in the Gulf of Mexico has been considered as an option to help restore lost biomass following the 2010 Deepwater Horizon oil spill. The most effective bycatch mitigation measures operate upon a differential response between target and bycatch species, ideally maintaining target catch while minimizing bycatch. We investigated whether bycatch vs target catch rates varied between day and night sets for the United States pelagic longline fishery in the Gulf of Mexico by comparing the influence of diel time period and moon illumination on catch rates of 18 commonly caught species/species groups. A generalized linear model approach was used to account for operational and environmental covariates, including: year, season, water temperature, hook type, bait, and maximum hook depth. Time of day or moon -
Early Stages of Fishes in the Western North Atlantic Ocean Volume
ISBN 0-9689167-4-x Early Stages of Fishes in the Western North Atlantic Ocean (Davis Strait, Southern Greenland and Flemish Cap to Cape Hatteras) Volume One Acipenseriformes through Syngnathiformes Michael P. Fahay ii Early Stages of Fishes in the Western North Atlantic Ocean iii Dedication This monograph is dedicated to those highly skilled larval fish illustrators whose talents and efforts have greatly facilitated the study of fish ontogeny. The works of many of those fine illustrators grace these pages. iv Early Stages of Fishes in the Western North Atlantic Ocean v Preface The contents of this monograph are a revision and update of an earlier atlas describing the eggs and larvae of western Atlantic marine fishes occurring between the Scotian Shelf and Cape Hatteras, North Carolina (Fahay, 1983). The three-fold increase in the total num- ber of species covered in the current compilation is the result of both a larger study area and a recent increase in published ontogenetic studies of fishes by many authors and students of the morphology of early stages of marine fishes. It is a tribute to the efforts of those authors that the ontogeny of greater than 70% of species known from the western North Atlantic Ocean is now well described. Michael Fahay 241 Sabino Road West Bath, Maine 04530 U.S.A. vi Acknowledgements I greatly appreciate the help provided by a number of very knowledgeable friends and colleagues dur- ing the preparation of this monograph. Jon Hare undertook a painstakingly critical review of the entire monograph, corrected omissions, inconsistencies, and errors of fact, and made suggestions which markedly improved its organization and presentation. -
Atlanta Ariejansseni, a New Species of Shelled Heteropod from the Southern Subtropical Convergence Zone (Gastropoda, Pterotracheoidea)
A peer-reviewed open-access journal ZooKeys 604: 13–30 (2016) Atlanta ariejansseni, a new species of shelled heteropod.... 13 doi: 10.3897/zookeys.604.8976 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Atlanta ariejansseni, a new species of shelled heteropod from the Southern Subtropical Convergence Zone (Gastropoda, Pterotracheoidea) Deborah Wall-Palmer1,2, Alice K. Burridge2,3, Katja T.C.A. Peijnenburg2,3 1 School of Geography, Earth and Environmental Sciences, Plymouth University, Drake Circus, Plymouth, PL4 8AA, UK 2 Naturalis Biodiversity Center, Darwinweg 2, 2333 CR Leiden, The Netherlands3 Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, P. O. Box 94248, 1090 GE Amster- dam, The Netherlands Corresponding author: Deborah Wall-Palmer ([email protected]) Academic editor: N. Yonow | Received 21 April 2016 | Accepted 22 June 2016 | Published 11 July 2016 http://zoobank.org/09E534C5-589D-409E-836B-CF64A069939D Citation: Wall-Palmer D, Burridge AK, Peijnenburg KTCA (2016) Atlanta ariejansseni, a new species of shelled heteropod from the Southern Subtropical Convergence Zone (Gastropoda, Pterotracheoidea). ZooKeys 604: 13–30. doi: 10.3897/zookeys.604.8976 Abstract The Atlantidae (shelled heteropods) is a family of microscopic aragonite shelled holoplanktonic gastro- pods with a wide biogeographical distribution in tropical, sub-tropical and temperate waters. The arago- nite shell and surface ocean habitat of the atlantids makes them particularly susceptible to ocean acidifica- tion and ocean warming, and atlantids are likely to be useful indicators of these changes. However, we still lack fundamental information on their taxonomy and biogeography, which is essential for monitoring the effects of a changing ocean. -
Bolbometopon Muricatum) in North Maluku Waters Muhammad J
DNA barcode and phylogenetics of green humphead parrotfish (Bolbometopon muricatum) in North Maluku waters Muhammad J. Achmad, Riyadi Subur, Supyan, Nebuchadnezzar Akbar Faculty of Fisheries and Marine Sciences, Khairun University, Ternate, North Maluku, Indonesia. Corresponding author: N. Akbar, [email protected] Abstract. The green humphead parrotfish (Bolbometopon muricatum) is one of the large species inhabiting coral reefs in North Maluku waters, Indonesia. The declining fish populations due to excessive fishing has caused the green humphead parrotfish to be listed in the Red List of IUCN in the vulnerable category since 2012. The species could be highly endangered, bordering extinction in the future. Studies on the genetic identification of green humphead parrotfish could be considered critical in the policy of sustainable conservation and fish culture. This research is designed for the identification and analysis of the genetic relationship of green humphead parrotfish based on the COI (cytochrome-c-oxidase subunit I) gene. DNA samples were collected from 4 locations in North Maluku, Ternate Island, Morotai Island, Bacan Island and Sanan Island. The DNA from samples was extracted and the COI gene was amplified using PCR (Polymerase Chain Reaction). Furthermore, the amplicon was sequenced to observe the similarities with the NCBI GenBank database. The results of this study showed that the green humphead parrotfish from this study had high similarities (98-100%) with the green humphead parrotfish with the reference access no. KY235362.1. Based on the phylogenetic tree, the green humphead parrotfish originating from North Maluku has a genetic relationship with the green humphead parrotfish from the database, but with different molecular characters. -
Evidence for the Validity of Protatlanta Sculpta (Gastropoda: Pterotracheoidea)
Contributions to Zoology, 85 (4) 423-435 (2016) Evidence for the validity of Protatlanta sculpta (Gastropoda: Pterotracheoidea) Deborah Wall-Palmer1, 2, 6, Alice K. Burridge2, 3, Katja T.C.A. Peijnenburg2, 3, Arie Janssen2, Erica Goetze4, Richard Kirby5, Malcolm B. Hart1, Christopher W. Smart1 1 School of Geography, Earth and Environmental Sciences, Plymouth University, Drake Circus, Plymouth, PL4 8AA, United Kingdom 2 Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, the Netherlands 3 Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam, P.O. Box 94248, 1090 GE Amsterdam, the Netherlands 4 Department of Oceanography, University of Hawai‘i at Mānoa, 1000 Pope Road, Honolulu, HI 96822, USA 5 Marine Biological Association, Citadel Hill, Plymouth, PL1 2PB, United Kingdom 6 E-mail: [email protected] Key words: Atlantic Ocean, biogeography, DNA barcoding, morphometrics, Protatlanta, shelled heteropod Abstract Introduction The genus Protatlanta is thought to be monotypic and is part of The genus Protatlanta Tesch, 1908 is one of three the Atlantidae, a family of shelled heteropods. These micro- shelled heteropod genera within the family Atlantidae. scopic planktonic gastropods are poorly known, although re- search on their ecology is now increasing in response to con- All members of the Atlantidae are microscopic (<12 cerns about the effects of ocean acidification on calcareous mm), holoplanktonic gastropods that have a foot mod- plankton. A correctly implemented taxonomy of the Atlantidae ified for swimming, a long proboscis, large, complex is fundamental to this progressing field of research and it re- eyes and flattened shells with keels. Defining charac- quires much attention, particularly using integrated molecular teristics of the three genera within the Atlantidae are and morphological techniques. -
DIET of FREE-RANGING and STRANDED SPERM WHALES (Physeter
DIET OF FREE-RANGING AND STRANDED SPERM WHALES (Physeter macrocephalus) FROM THE GULF OF MEXICO NATIONAL MARINE FISHERIES SERVICE CONTRACT REPORT Submitted to: Dr. Keith D. Mullin National Marine Fisheries Service Southeast Fisheries Science Center PO. Drawer 1207 Pascagoula, MS 39568-1207 Submitted by: Dr. Nelio B. Barros Mote Marine Laboratory Center for Marine Mammal and Sea Turtle Research 1600 Ken Thompson Parkway Sarasota, FL 34236-1096 (941) 388-4441 x 443 (941) 388-4317 FAX May 2003 Mote Marine Laboratory Technical Report Number 895 ABSTRACT Sperm whales are common inhabitants of the deep waters of the Gulf of Mexico. To date, no information is available on the diet of sperm whales in the Gulf. This study sheds light into the feeding habits ofthese whales by examining data collected from free-ranging and stranded animals. Prey species included a minimum of 13 species within 10 families of cephalopods, the only prey type observed. The most important prey was Histioteuthis, a midwater squid important in the diet of sperm whales worldwide. Most species of cephalopods consumed by Gulf sperm whales are meso to bathypelagic in distribution, being found in surface to waters 2,500 deep. Some of these prey are also vertical migrators. The diet of Gulf sperm whales does not include species targeted by the commercial fisheries. INTRODUCTION Until fairly recently, little was known about the species of whales and dolphins (cetaceans) inhabiting the deep waters of the Gulf of Mexico. Most of the information available came from opportunistic sightings and occasional strandings. In the early 1990' s large-scale dedicated surveys were initiated to study the distribution and abundance of marine mammals in the deep Gulf. -
New Zealand Fishes a Field Guide to Common Species Caught by Bottom, Midwater, and Surface Fishing Cover Photos: Top – Kingfish (Seriola Lalandi), Malcolm Francis
New Zealand fishes A field guide to common species caught by bottom, midwater, and surface fishing Cover photos: Top – Kingfish (Seriola lalandi), Malcolm Francis. Top left – Snapper (Chrysophrys auratus), Malcolm Francis. Centre – Catch of hoki (Macruronus novaezelandiae), Neil Bagley (NIWA). Bottom left – Jack mackerel (Trachurus sp.), Malcolm Francis. Bottom – Orange roughy (Hoplostethus atlanticus), NIWA. New Zealand fishes A field guide to common species caught by bottom, midwater, and surface fishing New Zealand Aquatic Environment and Biodiversity Report No: 208 Prepared for Fisheries New Zealand by P. J. McMillan M. P. Francis G. D. James L. J. Paul P. Marriott E. J. Mackay B. A. Wood D. W. Stevens L. H. Griggs S. J. Baird C. D. Roberts‡ A. L. Stewart‡ C. D. Struthers‡ J. E. Robbins NIWA, Private Bag 14901, Wellington 6241 ‡ Museum of New Zealand Te Papa Tongarewa, PO Box 467, Wellington, 6011Wellington ISSN 1176-9440 (print) ISSN 1179-6480 (online) ISBN 978-1-98-859425-5 (print) ISBN 978-1-98-859426-2 (online) 2019 Disclaimer While every effort was made to ensure the information in this publication is accurate, Fisheries New Zealand does not accept any responsibility or liability for error of fact, omission, interpretation or opinion that may be present, nor for the consequences of any decisions based on this information. Requests for further copies should be directed to: Publications Logistics Officer Ministry for Primary Industries PO Box 2526 WELLINGTON 6140 Email: [email protected] Telephone: 0800 00 83 33 Facsimile: 04-894 0300 This publication is also available on the Ministry for Primary Industries website at http://www.mpi.govt.nz/news-and-resources/publications/ A higher resolution (larger) PDF of this guide is also available by application to: [email protected] Citation: McMillan, P.J.; Francis, M.P.; James, G.D.; Paul, L.J.; Marriott, P.; Mackay, E.; Wood, B.A.; Stevens, D.W.; Griggs, L.H.; Baird, S.J.; Roberts, C.D.; Stewart, A.L.; Struthers, C.D.; Robbins, J.E. -
Bioinvasions in the Mediterranean Sea 2 7
Metamorphoses: Bioinvasions in the Mediterranean Sea 2 7 B. S. Galil and Menachem Goren Abstract Six hundred and eighty alien marine multicellular species have been recorded in the Mediterranean Sea, with many establishing viable populations and dispersing along its coastline. A brief history of bioinvasions research in the Mediterranean Sea is presented. Particular attention is paid to gelatinous invasive species: the temporal and spatial spread of four alien scyphozoans and two alien ctenophores is outlined. We highlight few of the dis- cernible, and sometimes dramatic, physical alterations to habitats associated with invasive aliens in the Mediterranean littoral, as well as food web interactions of alien and native fi sh. The propagule pressure driving the Erythraean invasion is powerful in the establishment and spread of alien species in the eastern and central Mediterranean. The implications of the enlargement of Suez Canal, refl ecting patterns in global trade and economy, are briefl y discussed. Keywords Alien • Vectors • Trends • Propagule pressure • Trophic levels • Jellyfi sh • Mediterranean Sea Brief History of Bioinvasion Research came suddenly with the much publicized plans of the in the Mediterranean Sea Saint- Simonians for a “Canal de jonction des deux mers” at the Isthmus of Suez. Even before the Suez Canal was fully The eminent European marine naturalists of the sixteenth excavated, the French zoologist Léon Vaillant ( 1865 ) argued century – Belon, Rondelet, Salviani, Gesner and Aldrovandi – that the breaching of the isthmus will bring about species recorded solely species native to the Mediterranean Sea, migration and mixing of faunas, and advocated what would though mercantile horizons have already expanded with be considered nowadays a ‘baseline study’. -
Reef Fishes of the Bird's Head Peninsula, West
Check List 5(3): 587–628, 2009. ISSN: 1809-127X LISTS OF SPECIES Reef fishes of the Bird’s Head Peninsula, West Papua, Indonesia Gerald R. Allen 1 Mark V. Erdmann 2 1 Department of Aquatic Zoology, Western Australian Museum. Locked Bag 49, Welshpool DC, Perth, Western Australia 6986. E-mail: [email protected] 2 Conservation International Indonesia Marine Program. Jl. Dr. Muwardi No. 17, Renon, Denpasar 80235 Indonesia. Abstract A checklist of shallow (to 60 m depth) reef fishes is provided for the Bird’s Head Peninsula region of West Papua, Indonesia. The area, which occupies the extreme western end of New Guinea, contains the world’s most diverse assemblage of coral reef fishes. The current checklist, which includes both historical records and recent survey results, includes 1,511 species in 451 genera and 111 families. Respective species totals for the three main coral reef areas – Raja Ampat Islands, Fakfak-Kaimana coast, and Cenderawasih Bay – are 1320, 995, and 877. In addition to its extraordinary species diversity, the region exhibits a remarkable level of endemism considering its relatively small area. A total of 26 species in 14 families are currently considered to be confined to the region. Introduction and finally a complex geologic past highlighted The region consisting of eastern Indonesia, East by shifting island arcs, oceanic plate collisions, Timor, Sabah, Philippines, Papua New Guinea, and widely fluctuating sea levels (Polhemus and the Solomon Islands is the global centre of 2007). reef fish diversity (Allen 2008). Approximately 2,460 species or 60 percent of the entire reef fish The Bird’s Head Peninsula and surrounding fauna of the Indo-West Pacific inhabits this waters has attracted the attention of naturalists and region, which is commonly referred to as the scientists ever since it was first visited by Coral Triangle (CT). -
Husbandry Manual for BLUE-RINGED OCTOPUS Hapalochlaena Lunulata (Mollusca: Octopodidae)
Husbandry Manual for BLUE-RINGED OCTOPUS Hapalochlaena lunulata (Mollusca: Octopodidae) Date By From Version 2005 Leanne Hayter Ultimo TAFE v 1 T A B L E O F C O N T E N T S 1 PREFACE ................................................................................................................................ 5 2 INTRODUCTION ...................................................................................................................... 6 2.1 CLASSIFICATION .............................................................................................................................. 8 2.2 GENERAL FEATURES ....................................................................................................................... 8 2.3 HISTORY IN CAPTIVITY ..................................................................................................................... 9 2.4 EDUCATION ..................................................................................................................................... 9 2.5 CONSERVATION & RESEARCH ........................................................................................................ 10 3 TAXONOMY ............................................................................................................................12 3.1 NOMENCLATURE ........................................................................................................................... 12 3.2 OTHER SPECIES ........................................................................................................................... -
XIV. Appendices
Appendix 1, Page 1 XIV. Appendices Appendix 1. Vertebrate Species of Alaska1 * Threatened/Endangered Fishes Scientific Name Common Name Eptatretus deani black hagfish Lampetra tridentata Pacific lamprey Lampetra camtschatica Arctic lamprey Lampetra alaskense Alaskan brook lamprey Lampetra ayresii river lamprey Lampetra richardsoni western brook lamprey Hydrolagus colliei spotted ratfish Prionace glauca blue shark Apristurus brunneus brown cat shark Lamna ditropis salmon shark Carcharodon carcharias white shark Cetorhinus maximus basking shark Hexanchus griseus bluntnose sixgill shark Somniosus pacificus Pacific sleeper shark Squalus acanthias spiny dogfish Raja binoculata big skate Raja rhina longnose skate Bathyraja parmifera Alaska skate Bathyraja aleutica Aleutian skate Bathyraja interrupta sandpaper skate Bathyraja lindbergi Commander skate Bathyraja abyssicola deepsea skate Bathyraja maculata whiteblotched skate Bathyraja minispinosa whitebrow skate Bathyraja trachura roughtail skate Bathyraja taranetzi mud skate Bathyraja violacea Okhotsk skate Acipenser medirostris green sturgeon Acipenser transmontanus white sturgeon Polyacanthonotus challengeri longnose tapirfish Synaphobranchus affinis slope cutthroat eel Histiobranchus bathybius deepwater cutthroat eel Avocettina infans blackline snipe eel Nemichthys scolopaceus slender snipe eel Alosa sapidissima American shad Clupea pallasii Pacific herring 1 This appendix lists the vertebrate species of Alaska, but it does not include subspecies, even though some of those are featured in the CWCS. -
Notes on the Systematics, Morphology and Biostratigraphy of Fossil Holoplanktonic Mollusca, 22 1
B76-Janssen-Grebnev:Basteria-2010 11/07/2012 19:23 Page 15 Notes on the systematics, morphology and biostratigraphy of fossil holoplanktonic Mollusca, 22 1. Further pelagic gastropods from Viti Levu, Fiji Archipelago Arie W. Janssen Netherlands Centre for Biodiversity Naturalis (Palaeontology Department), P.O. Box 9517, NL-2300 RA Leiden, The Netherlands; currently: 12, Triq tal’Hamrija, Xewkija XWK 9033, Gozo, Malta; [email protected] Andrew Grebneff † Formerly : University of Otago, Geology Department, Dunedin, New Zealand himself during holiday trips in 1995 and 1996, also from Viti Two localities in the island of Viti Levu, Fiji Archipelago, Levu, the largest island in the Fiji archipelago. Following an yielded together 28 species of Heteropoda (3 species) and initial evaluation of this material it remained unstudied, 15 Pteropoda (25 species). Two samples from Tabataba, NW however, for a long time . A first inspection acknowledged Viti Levu, indicate an age of late Miocene to early Pliocene. Andrew’s impression that part of the samples was younger Two samples from Waila, SE Viti Levu, signify an age of than the earlier described material and therefore worth Pliocene (Piacenzian) and closely resemble coeval assem - publishing. blages described from Pangasinan, Philippines. After the untimely death of Andrew Grebneff in July 2010 (see the website of the University of Otago, New Key words: Gastropoda, Pterotracheoidea, Limacinoidea, Zealand (http://www.otago.ac.nz/geology/news/files/ Cavolinioidea, Clionoidea, late Miocene, Pliocene, biostratigraphy, andrew_ grebneff.html) it was decided to restart the study Fiji archipelago. of those samples and publish the results with Andrew’s name added as a valuable co-author, as he not only collected the specimens but also participated in discussions on their Introduction taxonomy and age.