Understanding Inoculants
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Natural Endophytic Association Between Rhizobium Etli and Maize (Zea Mays L.)
Journal of Biotechnology 91 (2001) 117–126 www.elsevier.com/locate/jbiotec Natural endophytic association between Rhizobium etli and maize (Zea mays L.) M.L. Gutie´rrez-Zamora, E. Martı´nez-Romero * Centro de In6estigacio´n sobre Fijacio´n de Nitro´geno, UNAM. Ap.P. 565A, 62251 Cuerna6aca, Mexico Received 19 September 2000; received in revised form 16 January 2001; accepted 2 February 2001 Abstract Maize (Zea mays) and bean (Phaseolus 6ulgaris) have been traditionally grown in association for thousands of years in Mesoamerica. From surface sterilized maize roots, we have isolated over 60 Rhizobium strains that correspond to Rhizobium etli bv. phaseoli (the main symbiont of bean) on the basis of 16S rRNA gene restriction patterns, metabolic enzyme electropherotypes, organization of nif genes, and the ability to nodulate beans. The colonization capacity of some of the isolates was tested with an unimproved maize cultivar and with 30 maize land races. Increases in plant dry weight upon R. etli inoculation were recorded with some of the land races, and these increases may be related to plant growth promotion effects. Additionally, from within maize grown in monoculture we have also recovered R. etli isolates recognizable by their 16S rRNA gene types, which lack nif genes and are incapable of nodulating bean. These strains are presumed to correspond to the earlier described non-symbiotic R. etli obtained from bean rhizosphere. © 2001 Elsevier Science B.V. All rights reserved. Keywords: Rhizobium; Endophytes; Maize; Land races; Nitrogen fixation 1. Introduction 1998; James, 2000). In both sugar cane and rice, bacterial nitrogen fixation can contribute a sub- Cereals such as maize have high N fertilization stantial proportion of N to the plant (App et al., requirements for optimal yield. -
Rhizobium,, Agrobacterium Agrobacterium
Systems Microbiology Wednes Nov 1 - Brock Ch 17, 586-591 Ch 19, 656-66 Ch 31, 989-991 •• TheThe GlobalGlobal NitrogenNitrogen CycleCycle •• NN2 fixationfixation -- generalgeneral considerationsconsiderations •• PlantPlant microbialmicrobial symbiosessymbioses RhizobiumRhizobium,, AgrobacteriumAgrobacterium Table and diagram of the key processes and prokaryotes in the nitrogen cycle removed due to copyright restrictions. See Figure 19-28 in Madigan, Michael, and John Martinko. Brock Biology of Microorganisms. 11th ed. Upper Saddle River, NJ: Pearson PrenticeHall, 2006. ISBN: 0131443291. Nitrification Chemolithoautotrophs (aerobic) • Ammonia Oxidizers (Nitrosomonas, Nitrosococcus) • Nitrite Oxidizers (Nitrobacter, Nitrococcus) • Slow growing (less free energy available) • Enzyme ammonia monooxygenase - NO - NO - NH4 NO2 2 3 AO NO e- e- CO2 CH2O CO2 CH2O O2 H20 O2 H20 NH + Cation exchange capacity: 4 the ability of a soil to hold on to cations + NH + soil NH4 4 particle Microbial nitrification can effect + NH4 the retention of nitrogen in soil - NO3 - NO3 - NO3 - NO3 - NO - NO - NH4 NO2 2 3 AO NO e- e- CO2 CH2O CO2 CH2O O2 H20 O2 H20 NITROGEN CYCLING IN AQUARIA Image of fish swimming in an aquarium removed due to copyright restrictions. http://www.hubbardbrook.org/research/ gallery/powerpoint/Slide2.jpg ViewView from aboveabove Lake Lake 226 226 divider divider curtain curtain in Augustin August 1973. 1973. The bright green colour results from Cyanobacteria, which are growing on phosphorus added to the near side of the curtain. What happen’s when you dump lots of phosphate in a lake ??? Aerial view of Lake 227 in 1994. Note the bright green color caused by algae stimulated by the experimental addition of phosphorus for the 26th consecutive year. -
Defining the Rhizobium Leguminosarum Species Complex
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 12 December 2020 doi:10.20944/preprints202012.0297.v1 Article Defining the Rhizobium leguminosarum species complex J. Peter W. Young 1,*, Sara Moeskjær 2, Alexey Afonin 3, Praveen Rahi 4, Marta Maluk 5, Euan K. James 5, Maria Izabel A. Cavassim 6, M. Harun-or Rashid 7, Aregu Amsalu Aserse 8, Benjamin J. Perry 9, En Tao Wang 10, Encarna Velázquez 11, Evgeny E. Andronov 12, Anastasia Tampakaki 13, José David Flores Félix 14, Raúl Rivas González 11, Sameh H. Youseif 15, Marc Lepetit 16, Stéphane Boivin 16, Beatriz Jorrin 17, Gregory J. Kenicer 18, Álvaro Peix 19, Michael F. Hynes 20, Martha Helena Ramírez-Bahena 21, Arvind Gulati 22 and Chang-Fu Tian 23 1 Department of Biology, University of York, York YO10 5DD, UK 2 Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark; [email protected] 3 Laboratory for genetics of plant-microbe interactions, ARRIAM, Pushkin, 196608 Saint-Petersburg, Russia; [email protected] 4 National Centre for Microbial Resource, National Centre for Cell Science, Pune, India; [email protected] 5 Ecological Sciences, The James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK; [email protected] (M.M.); [email protected] (E.K.J.) 6 Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA; [email protected] 7 Biotechnology Division, Bangladesh Institute of Nuclear Agriculture (BINA), Bangladesh; [email protected] 8 Ecosystems and Environment Research programme , Faculty of Biological and Environmental Sciences, University of Helsinki, FI-00014 Finland; [email protected] 9 Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand; [email protected] 10 Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Cd. -
Pacific Islands Area
Habitat Planting for Pollinators Pacific Islands Area November 2014 The Xerces Society for Invertebrate Conservation www.xerces.org Acknowledgements This document is the result of collaboration with state and federal agencies and educational institutions. The authors would like to express their sincere gratitude for the technical assistance and time spent suggesting, advising, reviewing, and editing. In particular, we would like to thank the staff at the Hoolehua Plant Materials Center on the Hawaiian Island of Molokai, NRCS staff in Hawaii and American Samoa, and researchers and extension personnel at American Samoa Community College Land Grant (especially Mark Schmaedick). Authors Written by Jolie Goldenetz-Dollar (American Samoa Community College), Brianna Borders, Eric Lee- Mäder, and Mace Vaughan (The Xerces Society for Invertebrate Conservation), and Gregory Koob, Kawika Duvauchelle, and Glenn Sakamoto (USDA Natural Resources Conservation Service). Editing and layout Ashley Minnerath (The Xerces Society). Updated November 2014 by Sara Morris, Emily Krafft, and Anne Stine (The Xerces Society). Photographs We thank the photographers who generously allowed use of their images. Copyright of all photographs remains with the photographers. Cover main: Jolie Goldenetz-Dollar, American Samoa Community College. Cover bottom left: John Kaia, Lahaina Photography. Cover bottom right: Gregory Koob, Hawaii Natural Resources Conservation Service. Funding This technical note was funded by the U.S. Department of Agriculture (USDA) Natural Resources Conservation Service (NRCS) and produced jointly by the NRCS and The Xerces Society for Invertebrate Conservation. Additional support was provided by the National Institute for Food and Agriculture (USDA). Please contact Tony Ingersoll ([email protected]) for more information about this publication. -
THE NATIVE COASTAL PLANTS of OIAHU, HAWAIII Raymond S. Tabata Sea Grant Marine Advisory Program University of Hawaii at Manoa Ho
321 THE NATIVE COASTAL PLANTS OF OIAHU, HAWAIII Raymond S. Tabata Sea Grant Marine Advisory program University of Hawaii at Manoa Honolulu, Hawaii 96822 INTRODUCTION The most vulnerable elements in the coastline vegetation are the endemic strand elements, which are narrow in range ..•and the endemic elements of the native dry forests, which may have extended to the coast in the leeward areas.... (Richmond & Mueller Dombois 1972). The demise of the Hawaiian endemic flora has been a concern for many decades. Degener (1932 et seq.), Egler (1947), and Richmond and Mueller-Dombois (1972) h~ve documented the gradual loss of native plants on O'ahu due to the impacts of agriculture, development, and introduced plants. In recent years, with in creased interest in Hawaiiana, the native Hawaiian environment, and coastal zone management, there has been increasing concern for native coastal plants. This is shown by several, recent pUblications written for general audiences on this subject: Arrigoni (1977, 1978), Merlin (1977), and Tabata (1979). Also, a 20-minute slide/tape program "Ni Mea Uiu Ma Kahakai a Hawaili" was produced by Kimura and Nagata (1979). For O'ahu,particular1y, there is now new information on the status of native coastal plants: Richmond and Mue1ler-Dombois (1972) on O'ahu coastline ecosystems; Fosberg and Herbst (1975) on rare and endangered plants; Herbst (1976), ErS Corp. (1977), and Miura and Sato (1978) on the Barber's Point Deep-Draft Harbor site; Stemmermann (1977) on Hawaiian sandalwoods (Santalum spp.); Degener and Degener (1978) on the lohai (Sesbania spp.); Elliott and Hall (1978) on the Kahuku area; Char and Balakrishnan (1979) on the 'Ewa ·Plains flora; Gardner (1979) on nehe (LiEochaeta spp.); and Kimura and Nagata (19frO) on endangered coastal envi ronments. -
2010.-Hungria-MLI.Pdf
Mohammad Saghir Khan l Almas Zaidi Javed Musarrat Editors Microbes for Legume Improvement SpringerWienNewYork Editors Dr. Mohammad Saghir Khan Dr. Almas Zaidi Aligarh Muslim University Aligarh Muslim University Fac. Agricultural Sciences Fac. Agricultural Sciences Dept. Agricultural Microbiology Dept. Agricultural Microbiology 202002 Aligarh 202002 Aligarh India India [email protected] [email protected] Prof. Dr. Javed Musarrat Aligarh Muslim University Fac. Agricultural Sciences Dept. Agricultural Microbiology 202002 Aligarh India [email protected] This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically those of translation, reprinting, re-use of illustrations, broadcasting, reproduction by photocopying machines or similar means, and storage in data banks. Product Liability: The publisher can give no guarantee for all the information contained in this book. The use of registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. # 2010 Springer-Verlag/Wien Printed in Germany SpringerWienNewYork is a part of Springer Science+Business Media springer.at Typesetting: SPI, Pondicherry, India Printed on acid-free and chlorine-free bleached paper SPIN: 12711161 With 23 (partly coloured) Figures Library of Congress Control Number: 2010931546 ISBN 978-3-211-99752-9 e-ISBN 978-3-211-99753-6 DOI 10.1007/978-3-211-99753-6 SpringerWienNewYork Preface The farmer folks around the world are facing acute problems in providing plants with required nutrients due to inadequate supply of raw materials, poor storage quality, indiscriminate uses and unaffordable hike in the costs of synthetic chemical fertilizers. -
Collection and Conservation of Leguminous Crops and Their Wild Relatives in Cambodia, 2012
〔AREIPGR Vol. 29 : 135 ~ 159,2013〕 Original Paper Collection and Conservation of Leguminous Crops and Their Wild Relatives in Cambodia, 2012 TOMOOKA Norihiko1)・Phin PHAL2)・Seang LAY HENG2)・ Ty CHANNA2)・Ouk MAKARA2) 1) National Institute of Agrobiological Sciences, Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan 2) Cambodian Agriculture Research and Development Institute, National Road 3, Prateahlang, Dangkor, P.O Box 01, Phnom Penh, Cambodia Summary Based on a Letter of Agreement between the National Institute of Agrobiological Sciences (NIAS), Japan and the Cambodian Agriculture Research and Development Institute (CARDI), Cambodia, a field survey was conducted in Cambodia, from 12th to 24th November, 2012. As a result, 38 accessions of leguminous plants consist of Lablab purpureus (1 accession), Vigna marina (8), V. minima (10), V. radiata (3), V. umbellata (9), V. unguiculata (6) and V. vexillata (1) were recorded and seed samples were collected. All the seed materials collected were deposited at CARDI genebank, Cambodia and a subset of the collection were transferred to NIAS genebank, Japan as a safety backup using Standard Material Transfer Agreement (SMTA) of the International Treaty on Plant Genetic Resources for Food and Agriculture (ITPGRFA). These materials will be evaluated in 2013 and the multiplied seed materials will become available for research, breeding and educational purposes from the NIAS genebank (http://www.gene.affrc. go.jp/distribution_en.php?section=plant). KEY WORDS : Cambodia, Crop Wild Relatives, Legumes, Lablab, Vigna Introduction The NIAS genebank has been conducting domestic and overseas plant germplasm collections. Among them, those for collecting wild Glycine and Vigna germplasm were summarized in Appendix 1 and 2 of “Glycine Genetic Resources” in the proceedings of the 14th NIAS international workshop (Vaughan et al., 2011). -
Mungbean.Pdf
Short Duration Mungbean: A New Success in South Asia M.L. Chadha AVRDC – The World Vegetable Center, Regional Center for South Asia (RCSA) ICRISAT Campus, Hyderabad INDIA Asia-Pacific Association of Agricultural Research Institutions c/o FAO Regional Office for Asia and the Pacific Bangkok, Thailand For copies and further information, please write to: The Executive Secretary Asia-Pacific Association of Agricultural Research Institutions (APAARI) C/o FAO Regional Office for Asia & the Pacific (FAO RAP) Maliwan Mansion, 39 Phra Atit Road Bangkok 10200, Thailand Tel : (+66 2) 697 4371-3 Fax : (+66 2) 697 4408 E-Mail : [email protected] Website : www.apaari.org Printed in September 2010 Foreword Pulses are an important protein source for Asian people, many of whom largely depend upon cereals and pulses for their daily requirements. South Asian countries together are the world’s largest producers and consumers of pulses comprising mainly chickpea, pigeonpea and mungbean. Mungbean, being high in protein and easily digestible, constitutes a balanced diet in combination with cereals. Moreover, being one of the most short duration legumes, it has great scope of fitting in between rice- wheat cropping system in entire Indo-Gangetic plains. Unfortunately, the production of pulse crops over the past few decades has declined in almost all traditionally pulse growing countries like India, Nepal and Bangladesh. Accordingly, the need for increasing production and productivity of pulse crops, including mungbean, is being felt acutely throughout the region. AVRDC – The World Vegetable Center has played a significant role in evolving improved vegetables and mungbean germplasm in Asia. Working with national research partners in nearly two dozen Asian countries, AVRDC programs have led to the release of a large number of varieties adapted to local conditions, thus benefiting millions of farmers and consumers. -
Beans with Benefits—The Role of Mungbean (Vigna Radiata) in a Changing Environment
American Journal of Plant Sciences, 2018, 9, 1577-1600 http://www.scirp.org/journal/ajps ISSN Online: 2158-2750 ISSN Print: 2158-2742 Beans with Benefits—The Role of Mungbean (Vigna radiata) in a Changing Environment Lisa Pataczek1, Zahir Ahmad Zahir2, Maqshoof Ahmad3, Saima Rani4, Ramakrishnan Nair5, Roland Schafleitner6, Georg Cadisch1, Thomas Hilger1 1Institute of Agricultural Sciences in the Tropics, Agronomy in the Tropics and Subtropics (490e), University of Hohenheim, Stuttgart, Germany 2Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad, Pakistan 3University College of Agriculture and Environmental Sciences, The Islamia University of Bahawalpur, Bahawalpur, Pakistan 4Agricultural Economics Research Institute, PARC National Agricultural Research Center, Islamabad, Pakistan 5The World Vegetable Center South Asia, Hyderabad, India 6Biotechnology and Molecular Breeding, The World Vegetable Center, Taiwan How to cite this paper: Pataczek, L., Zahir, Abstract Z.A., Ahmad, M., Rani, S., Nair, R., Schaf- leitner, R., Cadisch, G. and Hilger, T. Dryland areas are experiencing low agricultural yields due to severe water (2018) Beans with Benefits—The Role of shortages and salinity, leading to food scarcity. Mungbean (Vigna radiata) is Mungbean (Vigna radiata) in a Changing gaining attention as a short-season crop that can tolerate dryland conditions, Environment. American Journal of Plant and fix atmospheric nitrogen, decreasing soil nutrient depletion. It is a source Sciences, 9, 1577-1600. https://doi.org/10.4236/ajps.2018.97115 of high-quality protein for human consumption and can serve as a multipur- pose crop, if harvest residues are used as fodder or green manure. However, Received: May 22, 2018 little of this legume’s potential has been explored. -
Analysis of Rhizobial Strains Nodulating Phaseolus Vulgaris From
Systematic and Applied Microbiology 37 (2014) 149–156 Contents lists available at ScienceDirect Systematic and Applied Microbiology j ournal homepage: www.elsevier.de/syapm Analysis of rhizobial strains nodulating Phaseolus vulgaris from Hispaniola Island, a geographic bridge between Meso and South America and the first historical link with Europe a b,c d César-Antonio Díaz-Alcántara , Martha-Helena Ramírez-Bahena , Daniel Mulas , e b b,c e,∗ Paula García-Fraile , Alicia Gómez-Moriano , Alvaro Peix , Encarna Velázquez , d Fernando González-Andrés a Facultad de Ciencias Agronómicas y Veterinarias, Universidad Autónoma de Santo Domingo, Dominican Republic b Instituto de Recursos Naturales y Agrobiología, IRNASA (CSIC), Salamanca, Spain c Unidad Asociada Grupo de Interacción Planta-Microorganismo, Universidad de Salamanca-IRNASA (CSIC), Spain d Instituto de Medio Ambiente, Recursos Naturales y Biodiversidad, Universidad de León, Spain e Departamento de Microbiología y Genética, Universidad de Salamanca, Spain a r t i c l e i n f o a b s t r a c t Article history: Hispaniola Island was the first stopover in the travels of Columbus between America and Spain, and Received 13 July 2013 played a crucial role in the exchange of Phaseolus vulgaris seeds and their endosymbionts. The analysis of Received in revised form recA and atpD genes from strains nodulating this legume in coastal and inner regions of Hispaniola Island 15 September 2013 showed that they were almost identical to those of the American strains CIAT 652, Ch24-10 and CNPAF512, Accepted 18 September 2013 which were initially named as Rhizobium etli and have been recently reclassified into Rhizobium phaseoli after the analysis of their genomes. -
Unesco – Eolss Sample Chapters
BIOTECHNOLOGY – Vol VIII - Essentials of Nitrogen Fixation Biotechnology - James H. P. Kahindi, Nancy K. Karanja ESSENTIALS OF NITROGEN FIXATION BIOTECHNOLOGY James H. P. Kahindi United States International University, Nairobi, KENYA Nancy K. Karanja Nairobi Microbiological Resources Centre, University of Nairobi, KENYA Keywords: Rhizobium, Bradyrhizobium, Sinorhizobium, Azorhizobium, Legumes, Nitrogen Fixation Contents 1. Introduction 2. Crop Requirements for Nitrogen 3. Potential for Biological Nitrogen Fixation [BNF] Systems 4. Diversity of Rhizobia 4.l. Factors Influencing Biological Nitrogen Fixation [BNF] 5. The Biochemistry of Biological Nitrogen Fixation: The Nitrogenase System 5.1. The Molybdenum Nitrogenase System 5.1.1. The Iron Protein (Fe protein) 5.1.2. The MoFe Protein 5.2. The Vanadium Nitrogenase 5.3. Nitrogenase-3 6. The Genetics of Nitrogen Fixation 6.1. The Mo-nitrogenase Structural Genes (nif H,D,K) 6.2. Genes for nitrogenase-2 (vnf H,D,G,K,vnfA,vnfE,N,X) 6.3. Regulation of Nif Gene Expression 7. The Potential for Biological Nitrogen Fixation with Non-legumes 7.1. Frankia 7.2. Associative Nitrogen Fixation 8. Application of Biological Nitrogen Fixation Technology 8.1. Experiences of the Biological Nitrogen Fixation -MIRCENs 8.2 Priorities for Action Glossary UNESCO – EOLSS Bibliography Biographical Sketches Summary SAMPLE CHAPTERS Nitrogen constitutes 78% of the Earth’s atmosphere, yet it is frequently the limiting nutrient to agricultural productivity. This necessitates the addition of nitrogen to the soil either through industrial nitrogen fertilizers, which is accomplished at a substantial energy cost, or by transformation of atmospheric nitrogen into forms which plants can take up for protein synthesis. This latter form is known as biological nitrogen fixation and is accomplished by free-living and symbiotic microorganisms endowed with the enzyme nitrogenase. -
Transfer of the Symbiotic Plasmid of Rhizobium Etli CFN42 to Endophytic Bacteria Inside Nodules
fmicb-11-01752 July 27, 2020 Time: 18:28 # 1 ORIGINAL RESEARCH published: 29 July 2020 doi: 10.3389/fmicb.2020.01752 Transfer of the Symbiotic Plasmid of Rhizobium etli CFN42 to Endophytic Bacteria Inside Nodules Luis Alfredo Bañuelos-Vazquez1, Daniel Cazares1, Susana Rodríguez2, Laura Cervantes-De la Luz1, Rosana Sánchez-López3, Lucas G. Castellani4, Gonzalo Torres Tejerizo4 and Susana Brom1* 1 Programa de Ingeniería Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico, 2 Programa de Biología de Sistemas y Biología Sintética, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mexico, 3 Departamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Mexico, 4 Departamento de Ciencias Biológicas, Facultad de Ciencias Exactas, Instituto de Biotecnología y Biología Molecular (IBBM) – CCT-CONICET-La Plata, Universidad Nacional de La Plata, La Plata, Argentina Conjugative transfer is one of the mechanisms allowing diversification and evolution of bacteria. Rhizobium etli CFN42 is a bacterial strain whose habitat is the rhizosphere and Edited by: is able to form nodules as a result of the nitrogen-fixing symbiotic relationship it may Clay Fuqua, Indiana University Bloomington, establish with the roots of Phaseolus vulgaris. R. etli CFN42 contains one chromosome United States and six large plasmids (pRet42a – pRet42f). Most of the genetic information involved Reviewed by: in the establishment of the symbiosis is localized on plasmid pRet42d, named as Joel S. Griffitts, the symbiotic plasmid (pSym). This plasmid is able to perform conjugation, using Brigham Young University, United States pSym encoded transfer genes controlled by the RctA/RctB system.