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BGBM Annual Report 2017–2019
NETWORKING FOR DIVERSITY Annual Report 2017 – 2019 2017 – BGBM BGBM Annual Report 2017 – 2019 Cover image: Research into global biodiversity and its significance for humanity is impossible without networks. The topic of networking can be understood in different ways: in the natural world, with the life processes within an organism – visible in the network of the veins of a leaf or in the genetic diversity in populations of plants – networking takes place by means of pollen, via pollinators or the wind. In the world of research, individual objects, such as a particular plant, are networked with the data obtained from them. Networking is also crucial if this data is to be effective as a knowledge base for solving global issues of the future: collaboration between scientific experts within and across disciplines and with stakeholders at regional, national and international level. Contents Foreword 5 Organisation 56 A network for plants 6 Facts and figures 57 Staff, visiting scientists, doctoral students 57 Key events of 2017 – 2019 10 Affiliated and unsalaried scientists, volunteers 58 BGBM publications 59 When diversity goes online 16 Species newly described by BGBM authors 78 Families and genera newly described by BGBM authors 82 On the quest for diversity 20 Online resources and databases 83 Externally funded projects 87 Invisible diversity 24 Hosted scientific events 2017 – 2019 92 Collections 93 Humboldt 2.0 30 Library 96 BGBM Press: publications 97 Between East and West 36 Botanical Museum 99 Press and public relations 101 At the service of science 40 Visitor numbers 102 Budget 103 A research museum 44 Publication information 104 Hands-on science 50 Our symbol, the corncockle 52 4 5 Foreword BGBM Annual Report 2017 – 2019 We are facing vital challenges. -
DISSERTAÇÃO Lidiane Alves Dos Santos.Pdf
UNIVERSIDADE FEDERAL DE PERNAMBUCO CENTRO DE BIOCIÊNCIAS DEPARTAMENTO DE MICOLOGIA PROGRAMA DE PÓS-GRADUAÇÃO EM BIOLOGIA DE FUNGOS LIDIANE ALVES DOS SANTOS RELAÇÕES FILOGENÉTICAS DOS GÊNEROS LECANORA ACH. E NEOPROTOPARMELIA GARIMA SINGH, LUMBSCH & I. SCHIMITT (LECANORALES, ASCOMYCOTA LIQUENIZADOS) Recife 2019 LIDIANE ALVES DOS SANTOS RELAÇÕES FILOGENÉTICAS DOS GÊNEROS LECANORA ACH. E NEOPROTOPARMELIA GARIMA SINGH, LUMBSCH & I. SCHIMITT (LECANORALES, ASCOMYCOTA LIQUENIZADOS) Dissertação apresentada ao Programa de Pós- Graduação em Biologia de Fungos do Departamento de Micologia do Centro de Biociências da Universidade Federal de Pernambuco, como parte dos requisitos para a obtenção do título de Mestre em Biologia de Fungos. Área de Concentração: Micologia Básica Orientadora: Profª. Dra. Marcela Eugenia da Silva Caceres. Coorientador: Dr. Robert Lücking. Recife 2019 Catalogação na fonte Elaine C Barroso (CRB4/1728) Santos, Lidiane Alves dos Relações filogenéticas dos gêneros Lecanora Ach. e Neoprotoparmelia Garima Singh, Lumbsch & I. Schimitt (Lecanorales, Ascomycota Liquenizados) / Lidiane Alves dos Santos- 2019. 52 folhas: il., fig., tab. Orientadora: Marcela Eugênia da Silva Cáceres Coorientador: Robert Lücking Dissertação (mestrado) – Universidade Federal de Pernambuco. Centro de Biociências. Programa de Pós-Graduação em Biologia de Fungos. Recife, 2019. Inclui referências 1. Fungos liquenizados 2. Filogenia 3. Metabólitos secundários I. Cáceres, Marcela Eugênia da Silva (orient.) II. Lücking, Robert (coorient.) III. Título 579.5 CDD (22.ed.) UFPE/CB-2019-312 LIDIANE ALVES DOS SANTOS RELAÇÕES FILOGENÉTICAS DOS GÊNEROS LECANORA ACH. E NEOPROTOPARMELIA GARIMA SINGH, LUMBSCH & I. SCHIMITT (LECANORALES, ASCOMYCOTA LIQUENIZADOS) Dissertação apresentada ao Programa de Pós- Graduação em Biologia de Fungos do Departamento de Micologia do Centro de Biociências da Universidade Federal de Pernambuco, como parte dos requisitos para a obtenção do título de Mestre em Biologia de Fungos. -
Ascomycota, Trypetheliaceae)
A peer-reviewed open-access journal MycoKeys 34: 25–34 (2018)Architrypethelium murisporum (Ascomycota, Trypetheliaceae)... 25 doi: 10.3897/mycokeys.34.23836 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Architrypethelium murisporum (Ascomycota, Trypetheliaceae), a remarkable new lichen species from Thailand challenging ascospore septation as an indicator of phylogenetic relationships Theerapat Luangsuphabool1, H. Thorsten Lumbsch2, Jittra Piapukiew3, Ek Sangvichien1 1 Department of Biology, Faculty of Science, Ramkhamhaeng University, Bangkok, Thailand2 Science & Edu- cation, The Field Museum, Chicago, Illinois, USA 3 Department of Botany, Faculty of Science, Chulalongkorn University, Bangkok, Thailand Corresponding author: H. Thorsten Lumbsch ([email protected]) Academic editor: P. Divakar | Received 23 January 2018 | Accepted 21 April 2018 | Published 10 May 2018 Citation: Luangsuphabool T, Lumbsch HT, Piapukiew J, Sangvichien E (2018) Architrypethelium murisporum (Ascomycota, Trypetheliaceae), a remarkable new lichen species from Thailand challenging ascospore septation as an indicator of phylogenetic relationships. MycoKeys 34: 25–34. https://doi.org/10.3897/mycokeys.34.23836 Abstract Architrypethelium murisporum Luangsuphabool, Lumbsch & Sangvichien is described for a crustose lichen occurring in dry evergreen forest in Thailand. It is characterised by a green to yellow-green corticated thal- lus, perithecia fused in black pseudostromata with white rim surrounding the ostiole and small, hyaline and muriform ascospores. Currently, all species in the genus Architrypethelium have transversely septate ascospores, hence the discovery of this new species indicates that ascospore septation is variable within the genus, similar to numerous other groups of lichen-forming ascomycetes. Phylogenetic analyses of two loci (mtSSU and nuLSU) supported the position of the new species within Architrypethelium. -
Patellariaceae Revisited
Mycosphere 6 (3): 290–326(2015) ISSN 2077 7019 www.mycosphere.org Article Mycosphere Copyright © 2015 Online Edition Doi 10.5943/mycosphere/6/3/7 Patellariaceae revisited Yacharoen S1,2, Tian Q1,2, Chomnunti P1,2, Boonmee S1, Chukeatirote E2, Bhat JD3 and Hyde KD1,2,4,5* 1Institute of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 2School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3Formerly at Department of Botany, Goa University, Goa 403 206, India 4Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 5World Agroforestry Centre, East and Central Asia, Kunming 650201, Yunnan, China Yacharoen S, Tian Q, Chomnunti P, Boonmee S, Chukeatirote E, Bhat JD, Hyde KD 2015 – Patellariaceae revisited. Mycosphere 6(3), 290–326, Doi 10.5943/mycosphere/6/3/7 Abstract The Dothideomycetes include several genera whose ascomata can be considered as apothecia and thus would be grouped as discomycetes. Most genera are grouped in the family Patellariaceae, but also Agrynnaceae and other families. The Hysteriales include genera having hysterioid ascomata and can be confused with species in Patellariaceae with discoid apothecia if the opening is wide enough. In this study, genera of the family Patellariaceae were re-examined and characterized based on morphological examination. As a result of this study the genera Baggea, Endotryblidium, Holmiella, Hysteropatella, Lecanidiella, Lirellodisca, Murangium, Patellaria, Poetschia, Rhizodiscina, Schrakia, Stratisporella and Tryblidaria are retained in the family Patellariaceae. The genera Banhegyia, Pseudoparodia and Rhytidhysteron are excluded because of differing morphology and/or molecular data. -
Lichenicolous Biota (Nos 201–230)
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Fritschiana Jahr/Year: 2015 Band/Volume: 80 Autor(en)/Author(s): Hafellner Josef Artikel/Article: Lichenicolous Biota (Nos 201-230) 21-41 - 21 - Lichenicolous Biota (Nos 201–230) Josef HAFELLNER* HAFELLNER Josef 2015: Lichenicolous Biota (Nos 201–230). – Frit- schiana (Graz) 80: 21–41. - ISSN 1024-0306. Abstract: The 9th fascicle (30 numbers) of the exsiccata 'Lichenicolous Biota' is published. The issue contains ma- terial of 20 non-lichenized fungal taxa (14 teleomorphs of ascomycetes, 4 anamorphic states of ascomycetes, 2 an- amorphic states of basidiomycetes) and 9 lichenized as- comycetes, including paratype material of Dimelaena li- chenicola K.Knudsen et al. (no 223), Miriquidica invadens Hafellner et al. (no 226, 227), and Stigmidium xantho- parmeliarum Hafellner (no 210). Furthermore, collections of the type species of the following genera are distributed: Illosporiopsis (I. christiansenii), Illosporium (I. carneum), Marchandiomyces (M. corallinus), Marchandiobasidium (M. aurantiacum, sub Erythricium aurantiacum), Micro- calicium (M. disseminatum), Nigropuncta (N. rugulosa), Paralecanographa (P. grumulosa), Phaeopyxis (P. punc- tum), Placocarpus (P. schaereri), Rhagadostoma (R. li- chenicola), and Stigmidium (S. schaereri). *Institut für Pflanzenwissenschaften, NAWI Graz, Karl-Franzens-Universität, Holteigasse 6, 8010 Graz, AUSTRIA e-mail: [email protected] Introduction The exsiccata 'Lichenicolous Biota' is continued with fascicle 9, containing 30 numbers. The exsiccata covers all lichenicolous biota, i.e., it is open not only to non- lichenized and lichenized fungi, but also to myxomycetes, bacteria, and even animals, whenever they cause a characteristic symptom on their host (e.g. discoloration or galls). -
A New Species of Aspicilia (Megasporaceae), with a New Lichenicolous Sagediopsis (Adelococcaceae), from the Falkland Islands
The Lichenologist (2021), 53, 307–315 doi:10.1017/S0024282921000244 Standard Paper A new species of Aspicilia (Megasporaceae), with a new lichenicolous Sagediopsis (Adelococcaceae), from the Falkland Islands Alan M. Fryday1 , Timothy B. Wheeler2 and Javier Etayo3 1Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 2Division of Biological Sciences, University of Montana, Missoula, Montana 59801, USA and 3Navarro Villoslada 16, 3° dcha., 31003 Pamplona, Navarra, Spain Abstract The new species Aspicilia malvinae is described from the Falkland Islands. It is the first species of Megasporaceae to be discovered on the islands and only the seventh to be reported from South America. It is distinguished from other species of Aspicilia by the unusual secondary metabolite chemistry (hypostictic acid) and molecular sequence data. The collections of the new species support two lichenicolous fungi: Endococcus propinquus s. lat., which is new to the Falkland Islands, and a new species of Sagediopsis with small perithecia and 3-septate ascospores c. 18–20 × 4–5 μm, which is described here as S. epimalvinae. A total of 60 new DNA sequences obtained from species of Megasporaceae (mostly Aspicilia) are also introduced. Key words: DNA sequences, Endococcus, Lecanora masafuerensis, lichen, southern South America, southern subpolar region (Accepted 18 March 2021) Introduction Materials and Methods Species of Megasporaceae Lumbsch et al. are surprisingly scarce Morphological methods in the Southern Hemisphere. Whereas 97 species are known Gross morphology was examined under a dissecting microscope from North America (Esslinger 2019), 104 from Russia and apothecial characteristics by light microscopy (compound (Urbanavichus 2010), 40 from Svalbard (Øvstedal et al. -
Opuscula Philolichenum, 8: 1-7. 2010
Opuscula Philolichenum, 8: 1-7. 2010. A brief lichen foray in the Mount Washington alpine zone – including Claurouxia chalybeioides, Porina norrlinii and Stereocaulon leucophaeopsis new to North America 1 ALAN M. FRYDAY ABSTRACT. – A preliminary investigation of the lichen biota of Mt. Washington (New Hampshire) is presented based on two days spent on the mountain in August 2008. Claurouxia chalybeioides, Porina norrlinii and Stereocaulon leucophaeopsis are reported for the first time from North America and Frutidella caesioatra is reported for the first time from the United States. A full list of the species recorded during the visit is also presented. INTRODUCTION Mt. Washington, at 1918 m, is the highest peak in northeast North America and has the most alpine tundra of any site in the eastern United States. In spite of this, its lichen biota is very poorly documented with the only published accounts to specifically mention Mt. Washington or the White Mountains by name obtained from the Recent Literature on Lichens web-site (Culberson et al. 2009), which includes all lichenological references since 1536, being an early work by Farlow (1884), and the ecological work by Bliss (1963, 1966), which included a few macrolichens. However, the mountain was a favorite destination of Edward Tuckerman and many records can be extracted from his published taxonomic works (e.g., Tuckerman 1845, 1847, 1882, 1888). More recently Richard Harris and William Buck of the New York Botanical Garden, and Clifford Wetmore of the University of Minnesota have collected lichens on the mountain. Their records have not been published, although the report Wetmore produced for the U.S. -
Australasian Lichenology Number 56, January 2005
Australasian Lichenology Number 56, January 2005 Australasian Lichenology Number 56, January 2005 ISSN 1328-4401 The Austral Pannaria immixta c.olonizes rock, bark, and occasionally bryophytes in both shaded and well-lit humid lowlands. Its two most distinctive traits are its squamulose thallus and its gyrose apothecial discs. 1 mm c:::::===- CONTENTS NEWS Kantvilas, ~ack Elix awarded the Acharius medal at IAL5 2 BOOK REVIEW Galloway, DJ-The Lichen Hunters, by Oliver Gilbert (2004) 4 RECENT LITERATURE ON AUSTRALASIAN LICHENS 7 ADDITIONAL LICHEN RECORDS FROM AUSTRALIA Elix, JA; Lumbsch, HT (55)-Diploschistes conception is 8 ARTICLES Archer, AW-Australian species in the genus Diorygma (Graphidaceae) ....... 10 Elix, JA; Blanco, 0; Crespo, A-A new species of Flauoparmelia (Parmeliaceae, lichenized Ascomycota) from Western Australia ...... .... ............................ ...... 12 Galloway, DJ; Sancho, LG-Umbilicaria murihikuana and U. robusta (Umbili cariaceae: Ascomycota), two new taxa from Aotearoa New Zealand .. ... .. ..... 16 Elix, JA; Bawingan, PA; Lardizaval, M; Schumm, F-Anew species ofMenegazzia (Parmeliaceae, lichenized Ascomycota) and new records of Parmeliaceae from Papua New Guinea and the Philippines .................................. .. .................... 20 Malcolm, WM-'ITansfer ofDimerella rubrifusca to Coenogonium ........ ......... 25 Johnson, PN- Lichen succession near Arthur's Pass, New Zealand ............... 26 NEWS JACK ELIXAWARDED THE ACHARIUS MEDALAT IAL5 The recent Fifth Conference of the International Association for Lichenology (1AL5) in Tartu, Estonia, was a highly successful event, and most Australasian lichenologists will have the opportunity to read of its various academic achieve ments in other media*. The social programme included the traditionallAL Din ner, where, after many days of symposia, poster sessions, excursions, meetings and other lichenological events, conference delegates mingle informally and dust away their weariness over food and drink. -
Pleosporomycetidae, Dothideomycetes) from a Freshwater Habitat in Thailand
Mycological Progress (2020) 19:1031–1042 https://doi.org/10.1007/s11557-020-01609-0 ORIGINAL ARTICLE Mycoenterolobium aquadictyosporium sp. nov. (Pleosporomycetidae, Dothideomycetes) from a freshwater habitat in Thailand Mark S. Calabon1,2 & Kevin D. Hyde1,3 & E. B. Gareth Jones4 & Mingkwan Doilom5,6 & Chun-Fang Liao5,6 & Saranyaphat Boonmee1,2 Received: 25 May 2020 /Revised: 25 July 2020 /Accepted: 28 July 2020 # German Mycological Society and Springer-Verlag GmbH Germany, part of Springer Nature 2020 Abstract A study of freshwater fungi in Thailand led to the discovery of Mycoenterolobium aquadictyosporium sp. nov. Evidence for the novelty and placement in Mycoenterolobium is based on comparison of morphological data. The new species differs from the type species, M. platysporum, in having shorter and wider conidia, and from M. flabelliforme in having much longer and wider conidia. The hyphomycetous genus Mycoenterolobium is similar to Cancellidium but differs in the arrangement of conidial rows of cells at the attachment point to the conidiophores. The conidia of the former are made up of rows of cells, radiating in a linear pattern from a single cell attached to the conidiophore, while in Cancellidium, adherent rows of septate branches radiate from the conidiophore. Cancellidium conidia also contain branched chains of blastic monilioid cells arising from the conidia, while these are lacking in Mycoenterolobium.AtmaturityinMycoenterolobium, the two conidial lobes unite and are closely appressed. Phylogenetic analyses based on a combined LSU, SSU, ITS, TEF1-α,andRPB2 loci sequence data support the placement of Mycoenterolobium aquadictyosporium close to the family Testudinaceae within Pleosporomycetidae, Dothideomycetes. The novel species Mycoenterolobium aquadictyosporium is described and illustrated and is compared with other morphologically similar taxa. -
Three Challenges to Contemporaneous Taxonomy from a Licheno-Mycological Perspective
Megataxa 001 (1): 078–103 ISSN 2703-3082 (print edition) https://www.mapress.com/j/mt/ MEGATAXA Copyright © 2020 Magnolia Press Review ISSN 2703-3090 (online edition) https://doi.org/10.11646/megataxa.1.1.16 Three challenges to contemporaneous taxonomy from a licheno-mycological perspective ROBERT LÜCKING Botanischer Garten und Botanisches Museum, Freie Universität Berlin, Königin-Luise-Straße 6–8, 14195 Berlin, Germany �[email protected]; https://orcid.org/0000-0002-3431-4636 Abstract Nagoya Protocol, and does not need additional “policing”. Indeed, the Nagoya Protocol puts the heaviest burden on This paper discusses three issues that challenge contempora- taxonomy and researchers cataloguing biodiversity, whereas neous taxonomy, with examples from the fields of mycology for the intended target group, namely those seeking revenue and lichenology, formulated as three questions: (1) What is gain from nature, the protocol may not actually work effec- the importance of taxonomy in contemporaneous and future tively. The notion of currently freely accessible digital se- science and society? (2) An increasing methodological gap in quence information (DSI) to become subject to the protocol, alpha taxonomy: challenge or opportunity? (3) The Nagoya even after previous publication, is misguided and conflicts Protocol: improvement or impediment to the science of tax- with the guidelines for ethical scientific conduct. Through onomy? The importance of taxonomy in society is illustrated its implementation of the Nagoya Protocol, Colombia has using the example of popular field guides and digital me- set a welcome precedence how to exempt taxonomic and dia, a billion-dollar business, arguing that the desire to name systematic research from “access to genetic resources”, and species is an intrinsic feature of the cognitive component of hopefully other biodiversity-rich countries will follow this nature connectedness of humans. -
Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska
AN ABSTRACT OF THE THESIS OF Kaleigh Spickerman for the degree of Master of Science in Botany and Plant Pathology presented on June 11, 2015 Title: Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska Abstract approved: ______________________________________________________ Bruce McCune Functional traits of vascular plants have been an important component of ecological studies for a number of years; however, in more recent times vascular plant ecologists have begun to formalize a set of key traits and universal system of trait measurement. Many recent studies hypothesize global generality of trait patterns, which would allow for comparison among ecosystems and biomes and provide a foundation for general rules and theories, the so-called “Holy Grail” of ecology. However, the majority of these studies focus on functional trait patterns of vascular plants, with a minority examining the patterns of cryptograms such as lichens. Lichens are an important component of many ecosystems due to their contributions to biodiversity and their key ecosystem services, such as contributions to mineral and hydrological cycles and ecosystem food webs. Lichens are also of special interest because of their reliance on atmospheric deposition for nutrients and water, which makes them particularly sensitive to air pollution. Therefore, they are often used as bioindicators of air pollution, climate change, and general ecosystem health. This thesis examines the functional trait patterns of lichens in two contrasting regions with fundamentally different kinds of data. To better understand the patterns of lichen functional traits, we examined reproductive, morphological, and chemical trait variation along precipitation and temperature gradients in Oregon. -
A Synopsis of Rhinacanthus (Acanthaceae) in Angola and Namibia
KEW BULLETIN (2018) 73: 21 ISSN: 0075-5974 (print) DOI 10.1007/S12225-018-9746-5 ISSN: 1874-933X (electronic) A synopsis of Rhinacanthus (Acanthaceae) in Angola and Namibia Iain Darbyshire1 , Leevi Nanyeni2, Frances M. Chase2 & Francisco M. P. Gonçalves3 Summary. The three species of the genus Rhinacanthus Nees occurring in Angola and Namibia are documented, including a full description of the new species R. angolensis I. Darbysh. and an expanded description of the scarce species R. kaokoensis K. Balkwill & S. D. Will. A key to their identification is provided, together with notes on their conservation status and species affinities. Key Words. conservation, Guineo-Congolian, IUCN Red List assessment, justicioid, Kaokoveld, new species, taxonomy. Introduction through a series of taxonomic papers and regional The genus Rhinacanthus Nees (in Wallich 1832:76) floristic treatments (Balkwill 1995; Darbyshire & Harris comprises 25 – 30 species, found mainly in tropical 2006;EnsermuKelbessa2006, 2009; Thulin 2006; Africa, Madagascar and the Indian Subcontinent. Within Darbyshire et al. 2010; Darbyshire 2012; Darbyshire the Acanthaceae, it is placed in the Diclipterinae et al. 2015). These works have collectively added nine clade of the “justicioid” lineage (McDade et al. 2000). new or resurrected names in African Rhinacanthus as well Rhinacanthus is morphologically similar to Justicia L. as one new record for the continent. A new species from sensu lato. It is distinguished by having the combination Sri Lanka, R. flavovirens Amaras. & Wijes., has also of a long, narrowly cylindrical corolla tube usually recently been described following studies of the genus exceeding the length of the bilabiate limb and by the in the southern Indian Subcontinent (Amarasinghe & two stamens having bithecous anthers in which the Wijesundara 2011), but further work is still much needed thecae are offset and ± oblique but, unlike in most on the Asian members of the genus.