Guidance Document for Rapid Ohia Death
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Bretziella, a New Genus to Accommodate the Oak Wilt Fungus
A peer-reviewed open-access journal MycoKeys 27: 1–19 (2017)Bretziella, a new genus to accommodate the oak wilt fungus... 1 doi: 10.3897/mycokeys.27.20657 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Bretziella, a new genus to accommodate the oak wilt fungus, Ceratocystis fagacearum (Microascales, Ascomycota) Z. Wilhelm de Beer1, Seonju Marincowitz1, Tuan A. Duong2, Michael J. Wingfield1 1 Department of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa 2 Department of Genetics, Forestry and Agricultural Bio- technology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa Corresponding author: Z. Wilhelm de Beer ([email protected]) Academic editor: T. Lumbsch | Received 28 August 2017 | Accepted 6 October 2017 | Published 20 October 2017 Citation: de Beer ZW, Marincowitz S, Duong TA, Wingfield MJ (2017) Bretziella, a new genus to accommodate the oak wilt fungus, Ceratocystis fagacearum (Microascales, Ascomycota). MycoKeys 27: 1–19. https://doi.org/10.3897/ mycokeys.27.20657 Abstract Recent reclassification of the Ceratocystidaceae (Microascales) based on multi-gene phylogenetic infer- ence has shown that the oak wilt fungus Ceratocystis fagacearum does not reside in any of the four genera in which it has previously been treated. In this study, we resolve typification problems for the fungus, confirm the synonymy ofChalara quercina (the first name applied to the fungus) andEndoconidiophora fagacearum (the name applied when the sexual state was discovered). Furthermore, the generic place- ment of the species was determined based on DNA sequences from authenticated isolates. The original specimens studied in both protologues and living isolates from the same host trees and geographical area were examined and shown to represent the same species. -
Saprophytic and Pathogenic Fungi in the Ceratocystidaceae Differ in Their Ability to Metabolize Plant-Derived Sucrose M
Van der Nest et al. BMC Evolutionary Biology (2015) 15:273 DOI 10.1186/s12862-015-0550-7 RESEARCH ARTICLE Open Access Saprophytic and pathogenic fungi in the Ceratocystidaceae differ in their ability to metabolize plant-derived sucrose M. A. Van der Nest1*, E. T. Steenkamp2, A. R. McTaggart2, C. Trollip1, T. Godlonton1, E. Sauerman1, D. Roodt1, K. Naidoo1, M. P. A. Coetzee1, P. M. Wilken1, M. J. Wingfield2 and B. D. Wingfield1 Abstract Background: Proteins in the Glycoside Hydrolase family 32 (GH32) are carbohydrate-active enzymes known as invertases that hydrolyse the glycosidic bonds of complex saccharides. Fungi rely on these enzymes to gain access to and utilize plant-derived sucrose. In fungi, GH32 invertase genes are found in higher copy numbers in the genomes of pathogens when compared to closely related saprophytes, suggesting an association between invertases and ecological strategy. The aim of this study was to investigate the distribution and evolution of GH32 invertases in the Ceratocystidaceae using a comparative genomics approach. This fungal family provides an interesting model to study the evolution of these genes, because it includes economically important pathogenic species such as Ceratocystis fimbriata, C. manginecans and C. albifundus, as well as saprophytic species such as Huntiella moniliformis, H. omanensis and H. savannae. Results: The publicly available Ceratocystidaceae genome sequences, as well as the H. savannae genome sequenced here, allowed for the identification of novel GH32-like sequences. The de novo assembly of the H. savannae draft genome consisted of 28.54 megabases that coded for 7 687 putative genes of which one represented a GH32 family member. -
Metrosideros.Pdf
Riding the ice age El Nin˜ o? Pacific biogeography and evolution of Metrosideros subg. Metrosideros (Myrtaceae) inferred from nuclear ribosomal DNA S. D. Wright*†, C. G. Yong*, J. W. Dawson‡, D. J. Whittaker*, and R. C. Gardner* *School of Biological Sciences, University of Auckland, P.B. 92019 Auckland, New Zealand; and ‡School of Biological Sciences, Victoria University, Box 600 Wellington, New Zealand Edited by Peter H. Raven, Missouri Botanical Garden, St. Louis, MO, and approved January 10, 2000 (received for review August 17, 1999) Metrosideros subg. Metrosideros (Myrtaceae) comprises Ϸ26 The very small seeds of Metrosideros require wind speeds of species distributed widely across the Pacific basin. They occur on only 5–19 km per h to be lofted. The seeds can retain viability the ancient Gondwanan landmasses of New Zealand and New in temperatures of Ϫ30°C for at least 6 h and after seawater Caledonia, as well as on the volcanic islands of the remote immersion for more than 1 month (10). Carlquist (1) suggested Pacific, from Melanesia to tropical Polynesia and the Bonin that the more remote taxa had achieved long-distance dispersal Island. Phylogenetic analysis based on nuclear ribosomal DNA to the isolated islands of Oceania on high-altitude jet streams spacer sequences from all named species showed Metrosideros that traverse the tropical Pacific from west to east. The most umbellata of New Zealand as basal in the subgenus, with the recent speculation on the dispersal history of subg. Metrosideros remaining species falling into three monophyletic clades. One (6) points to New Zealand rather than New Caledonia as the includes the seven New Caledonian species together with three landmass of origin and suggests that Samoa is the secondary axis daughters in western Oceania that probably dispersed during of dispersal into remote Polynesia. -
(GISD) 2021. Species Profile Ceratocystis Platani. Avail
FULL ACCOUNT FOR: Ceratocystis platani Ceratocystis platani System: Terrestrial Kingdom Phylum Class Order Family Fungi Ascomycota Sordariomycetes Microascales Ceratocystidacea e Common name canker-stain-of-plane-tree (English), canker stain (English) Synonym Ceratocystis fimbriata , f.sp. platani Endoconidiophora fimbriata , f. platani Similar species Summary Ceratocystis platani is a fungal pathogen that causes canker stain of plane trees in the genus Platanus. The fungus, thought to be native to south-eastern United States, was introduced to Italy in the 1940s. It rapidly infects plane trees, causing disruption of water movement, cankers and eventually death. It has since spread throughout Europe and threatens natural and planted populations of economically, ecologically and aesthetically important plane trees. view this species on IUCN Red List Species Description Ceratocystis platani is an ascomycete fungus that causes canker stain of plane tree, a serious disease of Platanus spp. in the United States and Europe. The fungus is a wound parasite, and can colonise even small wounds upon contact. After wound colonisation mycelium develops throughout the conducting tissues of the underlying sapwood. Colonisation can be 2.0-2.5 m/year from a single infection (Soulioti et al., 2008). \r\n The disease causes staining of the xylem, disruption of water movement, cankers and usually death of the tree. The most obvious disease symptom on oriental plane is sudden death of a portion of the crown. Cankers on the tree trunk, although not always visible through thick, rough bark, are characterised by necrosis of inner bark and bluish-black to reddish-brown discolouration of sapwood (Ocasio-Morales et al., 2007). -
Pests, Diseases, and Aridity Have Shaped the Genome of Corymbia Citriodora
Lawrence Berkeley National Laboratory Recent Work Title Pests, diseases, and aridity have shaped the genome of Corymbia citriodora. Permalink https://escholarship.org/uc/item/5t51515k Journal Communications biology, 4(1) ISSN 2399-3642 Authors Healey, Adam L Shepherd, Mervyn King, Graham J et al. Publication Date 2021-05-10 DOI 10.1038/s42003-021-02009-0 Peer reviewed eScholarship.org Powered by the California Digital Library University of California ARTICLE https://doi.org/10.1038/s42003-021-02009-0 OPEN Pests, diseases, and aridity have shaped the genome of Corymbia citriodora ✉ Adam L. Healey 1,2 , Mervyn Shepherd 3, Graham J. King 3, Jakob B. Butler 4, Jules S. Freeman 4,5,6, David J. Lee 7, Brad M. Potts4,5, Orzenil B. Silva-Junior8, Abdul Baten 3,9, Jerry Jenkins 1, Shengqiang Shu 10, John T. Lovell 1, Avinash Sreedasyam1, Jane Grimwood 1, Agnelo Furtado2, Dario Grattapaglia8,11, Kerrie W. Barry10, Hope Hundley10, Blake A. Simmons 2,12, Jeremy Schmutz 1,10, René E. Vaillancourt4,5 & Robert J. Henry 2 Corymbia citriodora is a member of the predominantly Southern Hemisphere Myrtaceae family, which includes the eucalypts (Eucalyptus, Corymbia and Angophora; ~800 species). 1234567890():,; Corymbia is grown for timber, pulp and paper, and essential oils in Australia, South Africa, Asia, and Brazil, maintaining a high-growth rate under marginal conditions due to drought, poor-quality soil, and biotic stresses. To dissect the genetic basis of these desirable traits, we sequenced and assembled the 408 Mb genome of Corymbia citriodora, anchored into eleven chromosomes. Comparative analysis with Eucalyptus grandis reveals high synteny, although the two diverged approximately 60 million years ago and have different genome sizes (408 vs 641 Mb), with few large intra-chromosomal rearrangements. -
Characterization of the Ergosterol Biosynthesis Pathway in Ceratocystidaceae
Journal of Fungi Article Characterization of the Ergosterol Biosynthesis Pathway in Ceratocystidaceae Mohammad Sayari 1,2,*, Magrieta A. van der Nest 1,3, Emma T. Steenkamp 1, Saleh Rahimlou 4 , Almuth Hammerbacher 1 and Brenda D. Wingfield 1 1 Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa; [email protected] (M.A.v.d.N.); [email protected] (E.T.S.); [email protected] (A.H.); brenda.wingfi[email protected] (B.D.W.) 2 Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, MB R3T 2N2, Canada 3 Biotechnology Platform, Agricultural Research Council (ARC), Onderstepoort Campus, Pretoria 0110, South Africa 4 Department of Mycology and Microbiology, University of Tartu, 14A Ravila, 50411 Tartu, Estonia; [email protected] * Correspondence: [email protected]; Fax: +1-204-474-7528 Abstract: Terpenes represent the biggest group of natural compounds on earth. This large class of organic hydrocarbons is distributed among all cellular organisms, including fungi. The different classes of terpenes produced by fungi are mono, sesqui, di- and triterpenes, although triterpene ergosterol is the main sterol identified in cell membranes of these organisms. The availability of genomic data from members in the Ceratocystidaceae enabled the detection and characterization of the genes encoding the enzymes in the mevalonate and ergosterol biosynthetic pathways. Using Citation: Sayari, M.; van der Nest, a bioinformatics approach, fungal orthologs of sterol biosynthesis genes in nine different species M.A.; Steenkamp, E.T.; Rahimlou, S.; of the Ceratocystidaceae were identified. -
Mapping Global Potential Risk of Mango Sudden Decline Disease Caused by Ceratocystis Fimbriata
RESEARCH ARTICLE Mapping Global Potential Risk of Mango Sudden Decline Disease Caused by Ceratocystis fimbriata Tarcísio Visintin da Silva Galdino1☯*, Sunil Kumar2☯, Leonardo S. S. Oliveira3‡, Acelino C. Alfenas3‡, Lisa G. Neven4‡, Abdullah M. Al-Sadi5‡, Marcelo C. Picanço6☯ 1 Department of Plant Science, Universidade Federal de Viçosa, Viçosa, MG, Brazil, 2 Natural Resource Ecology Laboratory, Colorado State University, Fort Collins, CO, United States of America, 3 Department of Plant Pathology, Universidade Federal de Viçosa, Viçosa, MG, Brazil, 4 United States Department of a11111 Agriculture-Agriculture Research Service, Yakima Agricultural Research Laboratory, Wapato, WA, United States of America, 5 Department of Crop Sciences, Sultan Qaboos University, AlKhoud, Oman, 6 Department of Entomology, Universidade Federal de Viçosa, Viçosa, MG, Brazil ☯ These authors contributed equally to this work. ‡ These authors also contributed equally to this work. * [email protected] OPEN ACCESS Citation: Galdino TVdS, Kumar S, Oliveira LSS, Abstract Alfenas AC, Neven LG, Al-Sadi AM, et al. (2016) Mapping Global Potential Risk of Mango Sudden The Mango Sudden Decline (MSD), also referred to as Mango Wilt, is an important disease Decline Disease Caused by Ceratocystis fimbriata. of mango in Brazil, Oman and Pakistan. This fungus is mainly disseminated by the mango PLoS ONE 11(7): e0159450. doi:10.1371/journal. pone.0159450 bark beetle, Hypocryphalus mangiferae (Stebbing), by infected plant material, and the infested soils where it is able to survive for long periods. The best way to avoid losses due Editor: Jae-Hyuk Yu, The University of Wisconsin - Madison, UNITED STATES to MSD is to prevent its establishment in mango production areas. -
Metrosideros Polymorpha Gaudich
Metrosideros polymorpha Gaudich. JAMES A. ALLEN Paul Smiths College, Paul Smiths, NY MYRTACEAE (MYRTLE FAMILY) Metrosideros collina (J.R. and G. Forst.) A. Gray subsp. polymorpha (Gaud.) Rock. (Little and Skolmen 1989). See also the extensive list of synonyms in Wagner and others (1990) Lehua, ‘ohi’a Metrosideros is a genus of about 50 species. With the excep- hybridization and genetic polymorphism is unknown (Wagner tion of one species found in South Africa, all grow in the and others 1990). Pacific from the Philippines, through Papua New Guinea, to The heartwood is reddish brown, heavy (specific gravity New Zealand and on high volcanic islands (Wagner and oth- of about 0.70), of fine and even texture, very hard, and strong. ers 1990). Five species occur in the Hawaiian Islands (Wag- Native Hawaiians used the wood extensively for construction, ner and others 1990). Metrosideros polymorpha is native to household implements, and carvings. Principal modern uses Hawaii, where it grows on all the main islands except Niihau include flooring, marine construction, pallets, fenceposts, and and Kahoolawe. It is the most abundant and widespread fuelwood. The wood’s limitations include excessive shrinkage M native tree in Hawaii (Adee and Conrad 1990) and grows in in drying, density, and the difficulty and expense of harvesting association with numerous species in both wet and relatively in low-volume stands (Adee and Conrad 1990, Little and Skol- dry forests. men 1989). Today, M. polymorpha is perhaps most highly val- Metrosideros polymorpha is a slow-growing, evergreen ued in Hawaii for uses in watershed protection, aesthetics, and species capable of reaching 24 to 30 m in height and about 1 m habitat for native birds, including several endangered species. -
Trees for Farm Forestry: 22 Promising Species
Forestry and Forest Products Natural Heritage Trust Helping Communities Helping Australia TREES FOR FARM FORESTRY: 22 PROMISING SPECIES Forestry and Forest Products TREES FOR FARM FORESTRY: Natural Heritage 22 PROMISING SPECIES Trust Helping Communities Helping Australia A report for the RIRDC/ Land & Water Australia/ FWPRDC Joint Venture Agroforestry Program Revised and Edited by Bronwyn Clarke, Ian McLeod and Tim Vercoe March 2009 i © 2008 Rural Industries Research and Development Corporation. All rights reserved. ISBN 1 74151 821 0 ISSN 1440-6845 Trees for Farm Forestry: 22 promising species Publication No. 09/015 Project No. CSF-56A The information contained in this publication is intended for general use to assist public knowledge and discussion and to help improve the development of sustainable regions. You must not rely on any information contained in this publication without taking specialist advice relevant to your particular circumstances. While reasonable care has been taken in preparing this publication to ensure that information is true and correct, the Commonwealth of Australia gives no assurance as to the accuracy of any information in this publication. The Commonwealth of Australia, the Rural Industries Research and Development Corporation (RIRDC), the authors or contributors expressly disclaim, to the maximum extent permitted by law, all responsibility and liability to any person, arising directly or indirectly from any act or omission, or for any consequences of any such act or omission, made in reliance on the contents of this publication, whether or not caused by any negligence on the part of the Commonwealth of Australia, RIRDC, the authors or contributors. The Commonwealth of Australia does not necessarily endorse the views in this publication. -
Ceratocystidaceae Exhibit High Levels of Recombination at the Mating-Type (MAT) Locus
Accepted Manuscript Ceratocystidaceae exhibit high levels of recombination at the mating-type (MAT) locus Melissa C. Simpson, Martin P.A. Coetzee, Magriet A. van der Nest, Michael J. Wingfield, Brenda D. Wingfield PII: S1878-6146(18)30293-9 DOI: 10.1016/j.funbio.2018.09.003 Reference: FUNBIO 959 To appear in: Fungal Biology Received Date: 10 November 2017 Revised Date: 11 July 2018 Accepted Date: 12 September 2018 Please cite this article as: Simpson, M.C., Coetzee, M.P.A., van der Nest, M.A., Wingfield, M.J., Wingfield, B.D., Ceratocystidaceae exhibit high levels of recombination at the mating-type (MAT) locus, Fungal Biology (2018), doi: https://doi.org/10.1016/j.funbio.2018.09.003. This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT 1 Title 2 Ceratocystidaceae exhibit high levels of recombination at the mating-type ( MAT ) locus 3 4 Authors 5 Melissa C. Simpson 6 [email protected] 7 Martin P.A. Coetzee 8 [email protected] 9 Magriet A. van der Nest 10 [email protected] 11 Michael J. Wingfield 12 [email protected] 13 Brenda D. -
Characterising Wood Properties for Deployment of Elite Subtropical And
Characterising wood properties for deployment of elite subtropical and tropical hardwoods Final Report Stephen J. Trueman‡*, Geoff R. Dickinson‡*, John R. Huth*, Anton Zbonak*, Jeremy T. Brawner†, Kevin J. Harding*, David J. Lee‡*, Paul Warburton†, Tracey V. McMahon‡, Amanda J. Kilkenny‡, Laura Simmons‡ and Helen M. Wallace‡ ‡Faculty of Science, Health, Education & Engineering, University of Sunshine Coast *Horticulture and Forestry Science Agri-Science Queensland Department Employment, Economic Development and Innovation †CSIRO Plant Industry March 2012 Introduction and Summary Queensland has over 42,000 hectares of hardwood plantations, with 13,700 hectares currently managed for sawn timber and high-value products. Previously, a major impediment to expansion of the hardwood sawn timber and high-value products industry in Queensland was that improved varieties of the key subtropical and tropical species were not available for plantation establishment. Trees from earlier projects, such as Hardwoods Queensland and the Private Plantations Initiative, have now reached an age where selection for growth, form and wood properties is possible. The current project used non-destructive and destructive wood evaluation techniques to characterise the timber quality of 443 subtropical and tropical Corymbia and Eucalyptus trees in these plantings, allowing selection of trees with the best growth, form and wood properties under Queensland conditions. Ecological assessments were also undertaken in the Corymbia plantings to identify germplasm that posed minimal risk of gene flow into native forests. Elite varieties are being fast tracked for deployment in Queensland using economical systems for germplasm capture and nursery production. The project identified and captured 108 new Corymbia and Eucalyptus varieties that can be grown with confidence in Queensland over a shorter rotation length and which produce well- characterised high-quality hardwood timber. -
Genera in Myrtaceae Family
Genera in Myrtaceae Family Genera in Myrtaceae Ref: http://data.kew.org/vpfg1992/vascplnt.html R. K. Brummitt 1992. Vascular Plant Families and Genera, Royal Botanic Gardens, Kew REF: Australian – APC http://www.anbg.gov.au/chah/apc/index.html & APNI http://www.anbg.gov.au/cgi-bin/apni Some of these genera are not native but naturalised Tasmanian taxa can be found at the Census: http://tmag.tas.gov.au/index.aspx?base=1273 Future reference: http://tmag.tas.gov.au/floratasmania [Myrtaceae is being edited at mo] Acca O.Berg Euryomyrtus Schaur Osbornia F.Muell. Accara Landrum Feijoa O.Berg Paragonis J.R.Wheeler & N.G.Marchant Acmena DC. [= Syzigium] Gomidesia O.Berg Paramyrciaria Kausel Acmenosperma Kausel [= Syzigium] Gossia N.Snow & Guymer Pericalymma (Endl.) Endl. Actinodium Schauer Heteropyxis Harv. Petraeomyrtus Craven Agonis (DC.) Sweet Hexachlamys O.Berg Phymatocarpus F.Muell. Allosyncarpia S.T.Blake Homalocalyx F.Muell. Pileanthus Labill. Amomyrtella Kausel Homalospermum Schauer Pilidiostigma Burret Amomyrtus (Burret) D.Legrand & Kausel [=Leptospermum] Piliocalyx Brongn. & Gris Angasomyrtus Trudgen & Keighery Homoranthus A.Cunn. ex Schauer Pimenta Lindl. Angophora Cav. Hottea Urb. Pleurocalyptus Brongn. & Gris Archirhodomyrtus (Nied.) Burret Hypocalymma (Endl.) Endl. Plinia L. Arillastrum Pancher ex Baill. Kania Schltr. Pseudanamomis Kausel Astartea DC. Kardomia Peter G. Wilson Psidium L. [naturalised] Asteromyrtus Schauer Kjellbergiodendron Burret Psiloxylon Thouars ex Tul. Austromyrtus (Nied.) Burret Kunzea Rchb. Purpureostemon Gugerli Babingtonia Lindl. Lamarchea Gaudich. Regelia Schauer Backhousia Hook. & Harv. Legrandia Kausel Rhodamnia Jack Baeckea L. Lenwebia N.Snow & ZGuymer Rhodomyrtus (DC.) Rchb. Balaustion Hook. Leptospermum J.R.Forst. & G.Forst. Rinzia Schauer Barongia Peter G.Wilson & B.Hyland Lindsayomyrtus B.Hyland & Steenis Ristantia Peter G.Wilson & J.T.Waterh.