Effectiveness of the Strategies Implemented in Sri Lanka For
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medRxiv preprint doi: https://doi.org/10.1101/2020.04.27.20082479; this version posted September 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . Effectiveness of the strategies implemented in Sri Lanka for controlling the COVID{19 outbreak K.K.W.H. Erandia1, A.C. Mahasingheb1, S.S.N. Pererac1, and S. Jayasinghed2 1 Centre for Mathematical Modelling, University of Colombo,Colombo 03, Sri Lanka 2 Department of Clinical Medicine, University of Colombo, Colombo 03, Sri Lanka a [email protected]; b [email protected]; c [email protected]; d [email protected] Abstract. In order to bring the new coronavirus pandemic in the country under control, the government of Sri Lanka implemented a set of control strategies including social distancing, quarantine, lockdowns, travel restrictions and isolation of villages. The aim of this study is to investigate the effectiveness of the overall control process with the aid of classical compartment models and network models. Our results indicate that the prevailing control strategies are effective with at least 50% contact rate reduction or with at least 40% isolation of the contact history of infected population. 1 Introduction An outbreak of a novel coronavirus (COVID{19) was reported from Wuhan province, China in December 2019 [8,20], causing numerous deaths and complications such as pneumonia and acute respiratory distress syndrome [9,16,21]. The infection rapidly spread to all parts of the globe and was declared a pandemic on 11th March 2020 by the World Health Organization [14]. Sri Lanka reported the first case in a Chinese tourist on 27th January 2020 and subsequently in a local person on 11th March, 2020 [19]. Aimed at controlling the pandemic, the government enforced a strict strategy of case detection, identification of contacts, quarantine, travel restrictions and isolation of small villages as well, changing the strategy in a timely manner, that has so far been successful in confining the epidemic to 2,810 cases as of 29th July 2020 and no community case was reported in the country since 30th April 2020. Figure 1 shows the variation of total cases and new cases reported up to 29th July 2020. I 3000 Total Cases 2500 New Cases 2000 1500 1000 500 0 11−Mar 20−Mar 31−Mar 10−Apr 20−Apr 30−Apr 10−May 20−May 30−May 10−Jun 20−Jun 30−Jul 10−Jul 20−Jul Time (days) Fig. 1: Reported COVID{19 cases from 11th March 2020 to 29th July 2020, Sri Lanka (Source: Epidemiology Unit, Ministry of Health, Sri Lanka) NOTE: This preprint reports new research that has not been certified by peer review and should not be used to guide clinical practice. medRxiv preprint doi: https://doi.org/10.1101/2020.04.27.20082479; this version posted September 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . 2 K.K.W.H. Erandi, A.C. Mahasinghe, S.S.N. Perera, and S. Jayasinghe Though some attention has been paid to other control measures such as spray- ing disinfectants, aimed at destroying the virus, the major control strategies imple- mented in Sri Lanka was aimed at minimizing the human movement. It is noteworthy that this was not a strategy used in the country even during the multiple epidemics of dengue, though others have long exercised restricting the mobility to control in- fectious diseases [2]. However, with the emergence of the COVID{19 outbreak, strict measures were taken to minimize human mobility. On 20th March, a nationwide cur- few was imposed till 24th March and it was further extended together with a strict ban on inter{district travel. The curfew was a legal mechanism available to the newly elected government since parliament had been dissolved pending an election. Three populous districts of, Colombo, Kalutara and Gampaha were identified as high-risk zones. The main intention of the curfew was to implement a lockdown and mini- mize contacts with infected individuals, and thereby reduce the growth rate of the epidemic. Entry of the virus to the island{nation was curtailed by closure of the airport and the ports together with the curfew. Extensive tracing was done of recent returnees from overseas (especially from China, Italy and South Korea) [17]. Identified patients were transferred to designated infectious disease hospitals and potential contacts to more than 40 quarantine centres, which were developed within a very short period and opened by the Ministry of Defense. In addition, on 21st April 2020, the gov- ernment began repatriating citizens stranded abroad and quarantine them for two weeks time period. In another example of quarantine, a whole village was sealed and quarantined in that location because an identified patient was found to have moved around 26 households in a circumscribed village. Entry and exit from the village was banned and they received free supplies and other amenities at the border. Starting from 26th March more than 16 villages or defined small urban areas were sealed for 2{4 weeks in the country to control the spread of the disease. Moreover, on 22st April 2020, a sailor from Welisara Navy camp was identified as a COVID{19 positive patient and immediately the camp was quarantined with 4,000 people at the Navy Camp. Since many sailors were on leave when contracted the disease, more than 6 villages were sealed off and around 1,300 people have been asked to self-quarantine. Considering the progress of the control measures and the impact of the strict curfew to the economy of the country, the government has announced on 19th April 2020 its decision to relax the nationwide curfew, and to implement moderated travel restrictions by permitting inter{district travels only to report for work and for es- sential services purposes. Further, on 11th May 2020 the government had ordered partial opening of offices and businesses and the restrictions were further relaxed with a new set of rules. For an example, wearing a mask is mandatory in indoor and outdoor public spaces and public transport. The police and army personnel has been empowered to carefully scrutinize whether citizens are obeying with the rules. Moreover, the sanitary measures such as having wash basins and sanitizes outside the groceries and supermarket for customers has been made compulsory and the supermarkets were instructed to use thermometers to check the temperatures of the customers before they enter the premises. The distances are marked in the counter queues to minimize the close contacts. Schools however started academic activities only for grade 5, 11 and 13 on 6th June and universities will continue online teaching and learning until further notice. medRxiv preprint doi: https://doi.org/10.1101/2020.04.27.20082479; this version posted September 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . Effectiveness of the strategies implemented in Sri Lanka for controlling the COVID{19 outbreak 3 Almost all control strategies implemented in Sri Lanka were aimed at minimizing the human mobility, both the imposition and the relaxation of the curfew could be interpreted as changing the mobility rates in a certain way. From a policy perspec- tive, it is relevant to know the extent of mobility that would be optimum to control the pandemic. This could be supported by reviewing the impact of mobility restric- tions on the pattern of 254 reported cases up to 19th April 2020 and comparing with the current situation. This would include the effects of curfew in some regions on other regions. In order to review the impact of the control strategies implemented so far, we used the classical compartment models in epidemiology to model the transmission of COVID{19 in the three main districts. The restrictions imposed of human move- ment were incorporated by moderating the compartment model accordingly, by parametrizing contact rate and adding inter{district travel. Then we investigated the impact of relaxing the curfew by considering how the disease could be transmit- ted through the epidemiological network created by inter{regional transport. 2 Materials and Methods In order to examine the transmission of the COVID{19, we adopted the Susceptible{ Exposed{Infectious{Recovered (SEIR) model [1] with control measures applied to the high{risk zones in the country. Since the incubation period for the disease is 2{14 days as reported, there is a high possibility of transmission prior to the onset of symptoms and without showing symptoms [10], which justifies the adoption of the SEIR model. In the classical SEIR model, a population of size Ni in the ith region is divided into susceptible (Si), exposed (Ei), infected (Ii) and recovered (Ri) components. We extended the model by including an extra compartment as hospitalized (Hi). This included all those entering hospitals and quarantine centers. The susceptible class consists of individuals who can possibly get infected by the disease. If the susceptible person is exposed to the virus, the individual is moved to the exposed compartment at the rate of βi. Let α be the transition rate of the exposed individuals to the infected class.