Implementations of Randomized Sorting on Large Parallel Machines
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An Efficient Evolutionary Algorithm for Solving Incrementally Structured
An Efficient Evolutionary Algorithm for Solving Incrementally Structured Problems Jason Ansel Maciej Pacula Saman Amarasinghe Una-May O'Reilly MIT - CSAIL July 14, 2011 Jason Ansel (MIT) PetaBricks July 14, 2011 1 / 30 Our goal is to make programs run faster We use evolutionary algorithms to search for faster programs The PetaBricks language defines search spaces of algorithmic choices Who are we? I do research in programming languages (PL) and compilers The PetaBricks language is a collaboration between: A PL / compiler research group A evolutionary algorithms research group A applied mathematics research group Jason Ansel (MIT) PetaBricks July 14, 2011 2 / 30 The PetaBricks language defines search spaces of algorithmic choices Who are we? I do research in programming languages (PL) and compilers The PetaBricks language is a collaboration between: A PL / compiler research group A evolutionary algorithms research group A applied mathematics research group Our goal is to make programs run faster We use evolutionary algorithms to search for faster programs Jason Ansel (MIT) PetaBricks July 14, 2011 2 / 30 Who are we? I do research in programming languages (PL) and compilers The PetaBricks language is a collaboration between: A PL / compiler research group A evolutionary algorithms research group A applied mathematics research group Our goal is to make programs run faster We use evolutionary algorithms to search for faster programs The PetaBricks language defines search spaces of algorithmic choices Jason Ansel (MIT) PetaBricks July 14, 2011 -
2.3 Quicksort
2.3 Quicksort ‣ quicksort ‣ selection ‣ duplicate keys ‣ system sorts Algorithms, 4th Edition · Robert Sedgewick and Kevin Wayne · Copyright © 2002–2010 · January 30, 2011 12:46:16 PM Two classic sorting algorithms Critical components in the world’s computational infrastructure. • Full scientific understanding of their properties has enabled us to develop them into practical system sorts. • Quicksort honored as one of top 10 algorithms of 20th century in science and engineering. Mergesort. last lecture • Java sort for objects. • Perl, C++ stable sort, Python stable sort, Firefox JavaScript, ... Quicksort. this lecture • Java sort for primitive types. • C qsort, Unix, Visual C++, Python, Matlab, Chrome JavaScript, ... 2 ‣ quicksort ‣ selection ‣ duplicate keys ‣ system sorts 3 Quicksort Basic plan. • Shuffle the array. • Partition so that, for some j - element a[j] is in place - no larger element to the left of j j - no smaller element to the right of Sir Charles Antony Richard Hoare • Sort each piece recursively. 1980 Turing Award input Q U I C K S O R T E X A M P L E shu!e K R A T E L E P U I M Q C X O S partitioning element partition E C A I E K L P U T M Q R X O S not greater not less sort left A C E E I K L P U T M Q R X O S sort right A C E E I K L M O P Q R S T U X result A C E E I K L M O P Q R S T U X Quicksort overview 4 Quicksort partitioning Basic plan. -
Advanced Topics in Sorting
Advanced Topics in Sorting complexity system sorts duplicate keys comparators 1 complexity system sorts duplicate keys comparators 2 Complexity of sorting Computational complexity. Framework to study efficiency of algorithms for solving a particular problem X. Machine model. Focus on fundamental operations. Upper bound. Cost guarantee provided by some algorithm for X. Lower bound. Proven limit on cost guarantee of any algorithm for X. Optimal algorithm. Algorithm with best cost guarantee for X. lower bound ~ upper bound Example: sorting. • Machine model = # comparisons access information only through compares • Upper bound = N lg N from mergesort. • Lower bound ? 3 Decision Tree a < b yes no code between comparisons (e.g., sequence of exchanges) b < c a < c yes no yes no a b c b a c a < c b < c yes no yes no a c b c a b b c a c b a 4 Comparison-based lower bound for sorting Theorem. Any comparison based sorting algorithm must use more than N lg N - 1.44 N comparisons in the worst-case. Pf. Assume input consists of N distinct values a through a . • 1 N • Worst case dictated by tree height h. N ! different orderings. • • (At least) one leaf corresponds to each ordering. Binary tree with N ! leaves cannot have height less than lg (N!) • h lg N! lg (N / e) N Stirling's formula = N lg N - N lg e N lg N - 1.44 N 5 Complexity of sorting Upper bound. Cost guarantee provided by some algorithm for X. Lower bound. Proven limit on cost guarantee of any algorithm for X. -
Sorting Algorithm 1 Sorting Algorithm
Sorting algorithm 1 Sorting algorithm In computer science, a sorting algorithm is an algorithm that puts elements of a list in a certain order. The most-used orders are numerical order and lexicographical order. Efficient sorting is important for optimizing the use of other algorithms (such as search and merge algorithms) that require sorted lists to work correctly; it is also often useful for canonicalizing data and for producing human-readable output. More formally, the output must satisfy two conditions: 1. The output is in nondecreasing order (each element is no smaller than the previous element according to the desired total order); 2. The output is a permutation, or reordering, of the input. Since the dawn of computing, the sorting problem has attracted a great deal of research, perhaps due to the complexity of solving it efficiently despite its simple, familiar statement. For example, bubble sort was analyzed as early as 1956.[1] Although many consider it a solved problem, useful new sorting algorithms are still being invented (for example, library sort was first published in 2004). Sorting algorithms are prevalent in introductory computer science classes, where the abundance of algorithms for the problem provides a gentle introduction to a variety of core algorithm concepts, such as big O notation, divide and conquer algorithms, data structures, randomized algorithms, best, worst and average case analysis, time-space tradeoffs, and lower bounds. Classification Sorting algorithms used in computer science are often classified by: • Computational complexity (worst, average and best behaviour) of element comparisons in terms of the size of the list . For typical sorting algorithms good behavior is and bad behavior is . -
Super Scalar Sample Sort
Super Scalar Sample Sort Peter Sanders1 and Sebastian Winkel2 1 Max Planck Institut f¨ur Informatik Saarbr¨ucken, Germany, [email protected] 2 Chair for Prog. Lang. and Compiler Construction Saarland University, Saarbr¨ucken, Germany, [email protected] Abstract. Sample sort, a generalization of quicksort that partitions the input into many pieces, is known as the best practical comparison based sorting algorithm for distributed memory parallel computers. We show that sample sort is also useful on a single processor. The main algorith- mic insight is that element comparisons can be decoupled from expensive conditional branching using predicated instructions. This transformation facilitates optimizations like loop unrolling and software pipelining. The final implementation, albeit cache efficient, is limited by a linear num- ber of memory accesses rather than the O(n log n) comparisons. On an Itanium 2 machine, we obtain a speedup of up to 2 over std::sort from the GCC STL library, which is known as one of the fastest available quicksort implementations. 1 Introduction Counting comparisons is the most common way to compare the complexity of comparison based sorting algorithms. Indeed, algorithms like quicksort with good sampling strategies [9,14] or merge sort perform close to the lower bound of log n! n log n comparisons3 for sorting n elements and are among the best algorithms≈ in practice (e.g., [24, 20, 5]). At least for numerical keys it is a bit astonishing that comparison operations alone should be good predictors for ex- ecution time because comparing numbers is equivalent to subtraction — an operation of negligible cost compared to memory accesses. -
How to Sort out Your Life in O(N) Time
How to sort out your life in O(n) time arel Číže @kaja47K funkcionaklne.cz I said, "Kiss me, you're beautiful - These are truly the last days" Godspeed You! Black Emperor, The Dead Flag Blues Everyone, deep in their hearts, is waiting for the end of the world to come. Haruki Murakami, 1Q84 ... Free lunch 1965 – 2022 Cramming More Components onto Integrated Circuits http://www.cs.utexas.edu/~fussell/courses/cs352h/papers/moore.pdf He pays his staff in junk. William S. Burroughs, Naked Lunch Sorting? quicksort and chill HS 1964 QS 1959 MS 1945 RS 1887 quicksort, mergesort, heapsort, radix sort, multi- way merge sort, samplesort, insertion sort, selection sort, library sort, counting sort, bucketsort, bitonic merge sort, Batcher odd-even sort, odd–even transposition sort, radix quick sort, radix merge sort*, burst sort binary search tree, B-tree, R-tree, VP tree, trie, log-structured merge tree, skip list, YOLO tree* vs. hashing Robin Hood hashing https://cs.uwaterloo.ca/research/tr/1986/CS-86-14.pdf xs.sorted.take(k) (take (sort xs) k) qsort(lotOfIntegers) It may be the wrong decision, but fuck it, it's mine. (Mark Z. Danielewski, House of Leaves) I tell you, my man, this is the American Dream in action! We’d be fools not to ride this strange torpedo all the way out to the end. (HST, FALILV) Linear time sorting? I owe the discovery of Uqbar to the conjunction of a mirror and an Encyclopedia. (Jorge Luis Borges, Tlön, Uqbar, Orbis Tertius) Sorting out graph processing https://github.com/frankmcsherry/blog/blob/master/posts/2015-08-15.md Radix Sort Revisited http://www.codercorner.com/RadixSortRevisited.htm Sketchy radix sort https://github.com/kaja47/sketches (thinking|drinking|WTF)* I know they accuse me of arrogance, and perhaps misanthropy, and perhaps of madness. -
Advanced Topics in Sorting List RSS News Items in Reverse Chronological Order
Sorting applications Sorting algorithms are essential in a broad variety of applications Organize an MP3 library. Display Google PageRank results. Advanced Topics in Sorting List RSS news items in reverse chronological order. Find the median. Find the closest pair. Binary search in a database. [email protected] Identify statistical outliers. Find duplicates in a mailing list. [email protected] Data compression. Computer graphics. Computational biology. Supply chain management. Load balancing on a parallel computer. http://www.4shared.com/file/79096214/fb2ed224/lect01.html . Sorting algorithms Which algorithm to use? Many sorting algorithms to choose from Applications have diverse attributes Stable? Internal sorts Multiple keys? Insertion sort, selection sort, bubblesort, shaker sort. Quicksort, mergesort, heapsort, samplesort, shellsort. Deterministic? Solitaire sort, red-black sort, splaysort, Dobosiewicz sort, psort, ... Keys all distinct? External sorts Multiple key types? Poly-phase mergesort, cascade-merge, oscillating sort. Linked list or arrays? Radix sorts Large or small records? Distribution, MSD, LSD. 3-way radix quicksort. Is your file randomly ordered? Parallel sorts Need guaranteed performance? Bitonic sort, Batcher even-odd sort. Smooth sort, cube sort, column sort. Cannot cover all combinations of attributes. GPUsort. 1 Case study 1 Case study 2 Problem Problem Sort a huge randomly-ordered file of small Sort a huge file that is already almost in records. order. Example Example Process transaction records for a phone Re-sort a huge database after a few company. changes. Which sorting method to use? Which sorting method to use? 1. Quicksort: YES, it's designed for this problem 1. Quicksort: probably no, insertion simpler and faster 2. -
Sorting Algorithm 1 Sorting Algorithm
Sorting algorithm 1 Sorting algorithm A sorting algorithm is an algorithm that puts elements of a list in a certain order. The most-used orders are numerical order and lexicographical order. Efficient sorting is important for optimizing the use of other algorithms (such as search and merge algorithms) which require input data to be in sorted lists; it is also often useful for canonicalizing data and for producing human-readable output. More formally, the output must satisfy two conditions: 1. The output is in nondecreasing order (each element is no smaller than the previous element according to the desired total order); 2. The output is a permutation (reordering) of the input. Since the dawn of computing, the sorting problem has attracted a great deal of research, perhaps due to the complexity of solving it efficiently despite its simple, familiar statement. For example, bubble sort was analyzed as early as 1956.[1] Although many consider it a solved problem, useful new sorting algorithms are still being invented (for example, library sort was first published in 2006). Sorting algorithms are prevalent in introductory computer science classes, where the abundance of algorithms for the problem provides a gentle introduction to a variety of core algorithm concepts, such as big O notation, divide and conquer algorithms, data structures, randomized algorithms, best, worst and average case analysis, time-space tradeoffs, and upper and lower bounds. Classification Sorting algorithms are often classified by: • Computational complexity (worst, average and best behavior) of element comparisons in terms of the size of the list (n). For typical serial sorting algorithms good behavior is O(n log n), with parallel sort in O(log2 n), and bad behavior is O(n2). -
STUDY of NON-COMPARISON SORTING ALGORITHMS By
STUDY OF NON-COMPARISON SORTING ALGORITHMS By ZHIMINMA Bachelor of Science Beijing University of Aeronautics & Astronauntics Beijing, P.R.China 1990 Suhmitted to the Faculty of the Graduate College of the Oklahoma State University In partial fulfillment of the requirements for the Degree of MASTER OF SCIENCE May, 2000 • STUDY OF NON-COMPARISON SORTING ALGORITHMS Thesis Approved: Uay11R.) 13. foudi. Dean of the Graduate College II PREFACE The primary purpose of this project is to compare two new non-comparison sorting algorithms: Groupsort and Flashsort 1. To simplify discussion, we focus on the performance of these algorithms with integer data. First, we test Groupsort and Flashsort1 against bucket sort using uniformly distributed integer values with a number of different additional storage spaces and give run time performance curves. Then, we test Groupsort and Flashsortl against Quicksort using different distributed input data and give run time perfomance curves. Through the analysis of impact of run time, additional storage space, and data distribution, an optimal method is given to make each algonthm perform well. I sincerely thank my M.S. Committee - Drs. J. P. Chandler. G. L. Ikdnck, and B. E. Mayfield --- for guidance and support in the completion or this research. III ACKNOWLEDGMENTS I wish to express my sincere appreciation to my advisor, Dr. J. P. Chandler, for his intelligent supervision, constructive guidance, and inspiration, My sincere appreciation extends to my other committee members Dr. G. E. Hedrick, and Dr. B. E. Mayfield, whose guidance, assistance, and encouragement were also invaluable. 1would like to give my special appreciation to my parents Mr. -
Mergesort and Quicksort
Algorithms ROBERT SEDGEWICK | KEVIN WAYNE 2.2 MERGESORT ‣ mergesort ‣ bottom-up mergesort Algorithms ‣ sorting complexity FOURTH EDITION ‣ comparators ‣ stability ROBERT SEDGEWICK | KEVIN WAYNE http://algs4.cs.princeton.edu Two classic sorting algorithms: mergesort and quicksort Critical components in the world’s computational infrastructure. ・Full scientific understanding of their properties has enabled us to develop them into practical system sorts. ・Quicksort honored as one of top 10 algorithms of 20th century in science and engineering. Mergesort. [this lecture] ... Quicksort. [next lecture] ... 2 2.2 MERGESORT ‣ mergesort ‣ bottom-up mergesort Algorithms ‣ sorting complexity ‣ comparators ‣ stability ROBERT SEDGEWICK | KEVIN WAYNE http://algs4.cs.princeton.edu Mergesort Basic plan. ・Divide array into two halves. ・Recursively sort each half. ・Merge two halves. input M E R G E S O R T E X A M P L E sort left half E E G M O R R S T E X A M P L E sort right half E E G M O R R S A E E L M P T X merge results A E E E E G L M M O P R R S T X Mergesort overview 4 Abstract in-place merge demo Goal. Given two sorted subarrays a[lo] to a[mid] and a[mid+1] to a[hi], replace with sorted subarray a[lo] to a[hi]. lo mid mid+1 hi a[] E E G M R A C E R T sorted sorted 5 Abstract in-place merge demo Goal. Given two sorted subarrays a[lo] to a[mid] and a[mid+1] to a[hi], replace with sorted subarray a[lo] to a[hi]. -
Algorithms ROBERT SEDGEWICK | KEVIN WAYNE
Algorithms ROBERT SEDGEWICK | KEVIN WAYNE 2.2 MERGESORT ‣ mergesort ‣ bottom-up mergesort Algorithms ‣ sorting complexity FOURTH EDITION ‣ divide-and-conquer ROBERT SEDGEWICK | KEVIN WAYNE https://algs4.cs.princeton.edu Last updated on 9/26/19 4:36 AM Two classic sorting algorithms: mergesort and quicksort Critical components in the world’s computational infrastructure. Full scientific understanding of their properties has enabled us to develop them into practical system sorts. Quicksort honored as one of top 10 algorithms of 20th century in science and engineering. Mergesort. [this lecture] ... Quicksort. [next lecture] ... 2 2.2 MERGESORT ‣ mergesort ‣ bottom-up mergesort Algorithms ‣ sorting complexity ‣ divide-and-conquer ROBERT SEDGEWICK | KEVIN WAYNE https://algs4.cs.princeton.edu Mergesort Basic plan. Divide array into two halves. Recursively sort each half. Merge two halves. input M E R G E S O R T E X A M P L E sort left half E E G M O R R S T E X A M P L E sort right half E E G M O R R S A E E L M P T X merge results A E E E E G L M M O P R R S T X Mergesort overview 4 Abstract in-place merge demo Goal. Given two sorted subarrays a[lo] to a[mid] and a[mid+1] to a[hi], replace with sorted subarray a[lo] to a[hi]. lo mid mid+1 hi a[] E E G M R A C E R T sorted sorted 5 Mergesort: Transylvanian–Saxon folk dance http://www.youtube.com/watch?v=XaqR3G_NVoo 6 Merging: Java implementation private static void merge(Comparable[] a, Comparable[] aux, int lo, int mid, int hi) { for (int k = lo; k <= hi; k++) copy aux[k] = a[k]; int i = lo, j = mid+1; merge for (int k = lo; k <= hi; k++) { if (i > mid) a[k] = aux[j++]; else if (j > hi) a[k] = aux[i++]; else if (less(aux[j], aux[i])) a[k] = aux[j++]; else a[k] = aux[i++]; } } lo i mid j hi aux[] A G L O R H I M S T k a[] A G H I L M 7 Mergesort quiz 1 How many calls does merge() make to less() in order to merge two sorted subarrays, each of length n / 2, into a sorted array of length n? A. -
Adaptive and Secured Resource Management in Distributed and Internet Systems
W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 2002 Adaptive and secured resource management in distributed and Internet systems Li Xiao College of William & Mary - Arts & Sciences Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Computer Sciences Commons Recommended Citation Xiao, Li, "Adaptive and secured resource management in distributed and Internet systems" (2002). Dissertations, Theses, and Masters Projects. Paper 1539623406. https://dx.doi.org/doi:10.21220/s2-deqc-ew25 This Dissertation is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Reproduced with with permission permission of the of copyright the copyright owner. owner.Further reproductionFurther reproduction prohibited without prohibited permission. without permission. Adaptive and Secured Resource Management in Distributed and Internet Systems A Dissertation Presented to The Faculty of the Department of Computer Science The College of William & Mary in Virginia In Partial Fulfillment Of the Requirements for the Degree of Doctor of Philosophy by Li Xiao 2002 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. APPROVAL SHEET Tliis dissertation is submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy .JU Li Xiao Approved. July 2002 Thesis Advisor V)JjU^ 'I William L. Bvmun ' Phil Kearns c/C'-vX ^ A^ Robert E. Noonan Marc Slier Department of Physics Reproduced with permission of the copyright owner.