In Vitro Virucidal Activity of Echinaforce®, an Echinacea Purpurea

Total Page:16

File Type:pdf, Size:1020Kb

In Vitro Virucidal Activity of Echinaforce®, an Echinacea Purpurea Signer et al. Virology Journal (2020) 17:136 https://doi.org/10.1186/s12985-020-01401-2 RESEARCH Open Access In vitro virucidal activity of Echinaforce®, an Echinacea purpurea preparation, against coronaviruses, including common cold coronavirus 229E and SARS-CoV-2 Johanna Signer1†, Hulda R. Jonsdottir1*† , Werner C. Albrich2, Marc Strasser1, Roland Züst1, Sarah Ryter1, Rahel Ackermann-Gäumann1, Nicole Lenz1, Denise Siegrist1, Andreas Suter3, Roland Schoop3 and Olivier B. Engler1* Abstract Background: Coronaviruses (CoVs) were long thought to only cause mild respiratory and gastrointestinal symptoms in humans but outbreaks of Middle East Respiratory Syndrome (MERS)-CoV, Severe Acute Respiratory Syndrome (SARS)-CoV-1, and the recently identified SARS-CoV-2 have cemented their zoonotic potential and their capacity to cause serious morbidity and mortality, with case fatality rates ranging from 4 to 35%. Currently, no specific prophylaxis or treatment is available for CoV infections. Therefore we investigated the virucidal and antiviral potential of Echinacea purpurea (Echinaforce®) against human coronavirus (HCoV) 229E, highly pathogenic MERS- and SARS-CoVs, as well as the newly identified SARS-CoV-2, in vitro. Methods: To evaluate the antiviral potential of the extract, we pre-treated virus particles and cells and evaluated remaining infectivity by limited dilution. Furthermore, we exposed cells to the extract after infection to further evaluate its potential as a prophylaxis and treatment against coronaviruses. We also determined the protective effect of Echinaforce® in re-constituted nasal epithelium. Results: In the current study, we found that HCoV-229E was irreversibly inactivated when exposed to Echinaforce® at 3.2 μg/ml IC50. Pre-treatment of cell lines, however, did not inhibit infection with HCoV-229E and post-infection treatment had only a marginal effect on virus propagation at 50 μg/ml. However, we did observe a protective effect in an organotypic respiratory cell culture system by exposing pre-treated respiratory epithelium to droplets of HCoV-229E, imitating a natural infection. The observed virucidal activity of Echinaforce® was not restricted to common cold coronaviruses, as both SARS-CoV-1 and MERS-CoVs were inactivated at comparable concentrations. Finally, the causative agent of COVID-19, SARS-CoV-2 was also inactivated upon treatment with 50μg/ml Echinaforce®. (Continued on next page) * Correspondence: [email protected]; [email protected] †Johanna Signer and Hulda R. Jonsdottir contributed equally to this work. 1SPIEZ LABORATORY, Austrasse, 3700 Spiez, Switzerland Full list of author information is available at the end of the article © The Author(s). 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data. Signer et al. Virology Journal (2020) 17:136 Page 2 of 11 (Continued from previous page) Conclusions: These results show that Echinaforce® is virucidal against HCoV-229E, upon direct contact and in an organotypic cell culture model. Furthermore, MERS-CoV and both SARS-CoV-1 and SARS-CoV-2 were inactivated at similar concentrations of the extract. Therefore we hypothesize that Echinacea purpurea preparations, such as Echinaforce®, could be effective as prophylactic treatment for all CoVs due to their structural similarities. Keywords: Antivirals, Echinacea, Coronavirus, Prevention, HCoV-229E, Common cold, SARS-CoV-1, MERS-CoV, SARS- CoV-2 Background Echinacea plants have traditionally been used in North Coronaviruses (CoVs) are enveloped, positive-sense, America for the prevention and treatment of cold and single-stranded RNA viruses with a large genome, typic- flu symptoms and are now one of the most widely used ally 26–32 kb in length. They belong to the family Coro- medical plants in both North America and Europe [13]. naviridae and are capable of infecting a wide variety of Several different products are on the market, not only hosts [1]. The CoVs capable of causing disease in varying in the Echinacea species and the parts of the humans (HCoVs) were traditionally thought to cause plant used but also in manufacturing procedures, which, only mild gastrointestinal and respiratory tract symp- unfortunately, results in a large variability in quality and toms. Currently, seven HCoVs have been identified. Four activity [14, 15]. Echinaforce® is a standardized prepar- of those, HCoV-229E, HCoV-OC43, HCoV-NL63 and ation extracted from freshly harvested Echinacae pur- HCoV-HKU1, are non-zoonotic and cause worldwide purea plants with a 65% alcoholic solution. outbreaks of upper respiratory tract infections (URTI) Echinaforce® as prevention and treatment of respira- predominantly in the winter period [2]. These com- tory tract infections has been investigated in both pre- monly circulating viruses have been thought to be re- clinical and clinical studies and its beneficial effects sponsible for 10–15% of all URTIs in humans. They documented [16–19]. Specific mechanism of action is replicate in the nasopharynx and generally cause mild, not fully understood but in vitro studies indicate that self-limited URTIs with short incubation periods, al- Echinaforce® inhibits enveloped respiratory viruses in- though lower tract respiratory infections and pneumonia cluding influenza A and B, respiratory syncytial virus have occasionally been described [3–6]. Until the emer- (RSV) or parainfluenza virus, through direct interaction gence of Severe Acute Respiratory Syndrome (SARS)- with whole virions and viral envelope proteins [20, 21]. CoV-1 in 2002, HCoVs were thought to mainly be In general, intracellular activity of Echinacea has been responsible for the common cold. However, the more observed for some viruses (e.g. influenza and herpes sim- virulent coronaviruses, Middle East respiratory syn- plex virus) but not others (e.g. RSV), and only at higher drome (MERS)-CoV and SARS-CoV-1 have animal res- concentrations than required for extracellular inactiva- ervoirs with proposed origins in bats [7] and can cause tion. Furthermore, Echinacea has been shown to severe pneumonias with longer incubation periods and interfere with virus mediated cytokine release [22, 23] often fatal outcome [8]. SARS-CoV-1 was introduced and since typical symptoms of the common cold, i.e. into the human species in 2002 causing a worldwide sneezing, coughing and runny nose, are the results of pandemic, culminating in 8422 infections and 916 deaths the stimulation of pro-inflammatory cytokines, the re- [9]. MERS-CoV is endemic in dromedary camels and duction of cytokine release might help to ease such leads to lower respiratory tract infections in humans with symptoms. In a randomized, double-blind, multi-center, a current case-fatality rate of 35.5% [10]. As of late 2019, a non-inferiority clinical trial Echinaforce® was demon- pneumonia outbreak caused by a novel CoV, designated strated to be non-inferior to Oseltamivir in patients with SARS-CoV-2, supposedly originating from a live seafood influenza-like illness, i.e. involvement of the lower re- market in Wuhan, China, has resulted in a global pan- spiratory tract (cough) and systemic symptoms (e.g. demic with almost 25 million infections and over 800.000 headache, myalgia, fever), and confirmed influenza deaths (WHO situation report, August 31st 2020 and infection with a non-significant trend towards lower in- [11]). To date, there is a lack of established and clinically cidence of complications with Echinaforce Hot Drink® tested antiviral compounds against coronaviruses in gen- compared to Oseltamivir [17]. eral and, more distressingly, the zoonotic betacorona- The antiviral activity of Echinacea has been investi- viruses [12]. Given their increasing incidence and burden, gated in vitro for most of the respiratory viruses finding an inexpensive, accessible and effective treatment associated with common colds and flu, but as of yet, not for HCoVs is of utmost importance. for coronaviruses. Since HCoV-229E is a typical Signer et al. Virology Journal (2020) 17:136 Page 3 of 11 representative of a coronavirus strain causing a seasonal Table 1 Pharmacologically active substances in Echinaforce common cold, we used this virus strain to investigate (batch: 1023117). Data is presented as the mean of four the general antiviral activity of Echinaforce® against cor- independent determinations onaviruses, thereby closing the knowledge gap on the Compound Concentration (μg/ml) antiviral effects of Echinacea purpurea on typical Caffeic acid 0±0 common cold viruses. Furthermore, we expanded
Recommended publications
  • Virus Goes Viral: an Educational Kit for Virology Classes
    Souza et al. Virology Journal (2020) 17:13 https://doi.org/10.1186/s12985-020-1291-9 RESEARCH Open Access Virus goes viral: an educational kit for virology classes Gabriel Augusto Pires de Souza1†, Victória Fulgêncio Queiroz1†, Maurício Teixeira Lima1†, Erik Vinicius de Sousa Reis1, Luiz Felipe Leomil Coelho2 and Jônatas Santos Abrahão1* Abstract Background: Viruses are the most numerous entities on Earth and have also been central to many episodes in the history of humankind. As the study of viruses progresses further and further, there are several limitations in transferring this knowledge to undergraduate and high school students. This deficiency is due to the difficulty in designing hands-on lessons that allow students to better absorb content, given limited financial resources and facilities, as well as the difficulty of exploiting viral particles, due to their small dimensions. The development of tools for teaching virology is important to encourage educators to expand on the covered topics and connect them to recent findings. Discoveries, such as giant DNA viruses, have provided an opportunity to explore aspects of viral particles in ways never seen before. Coupling these novel findings with techniques already explored by classical virology, including visualization of cytopathic effects on permissive cells, may represent a new way for teaching virology. This work aimed to develop a slide microscope kit that explores giant virus particles and some aspects of animal virus interaction with cell lines, with the goal of providing an innovative approach to virology teaching. Methods: Slides were produced by staining, with crystal violet, purified giant viruses and BSC-40 and Vero cells infected with viruses of the genera Orthopoxvirus, Flavivirus, and Alphavirus.
    [Show full text]
  • View Policy Viral Infectivity
    Virology Journal BioMed Central Editorial Open Access Virology on the Internet: the time is right for a new journal Robert F Garry* Address: Department of Microbiology and Immunology Tulane University School of Medicine New Orleans, Louisiana USA Email: Robert F Garry* - [email protected] * Corresponding author Published: 26 August 2004 Received: 31 July 2004 Accepted: 26 August 2004 Virology Journal 2004, 1:1 doi:10.1186/1743-422X-1-1 This article is available from: http://www.virologyj.com/content/1/1/1 © 2004 Garry; licensee BioMed Central Ltd. This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Virology Journal is an exclusively on-line, Open Access journal devoted to the presentation of high- quality original research concerning human, animal, plant, insect bacterial, and fungal viruses. Virology Journal will establish a strategic alternative to the traditional virology communication process. The outbreaks of SARS coronavirus and West Nile virus Open Access (WNV), and the troubling increase of poliovirus infec- Virology Journal's Open Access policy changes the way in tions in Africa, are but a few recent examples of the unpre- which articles in virology can be published [1]. First, all dictable and ever-changing topography of the field of articles are freely and universally accessible online as soon virology. Previously unknown viruses, such as the SARS as they are published, so an author's work can be read by coronavirus, may emerge at anytime, anywhere in the anyone at no cost.
    [Show full text]
  • Viral Gene Therapy Lecture 25 Biology 3310/4310 Virology Spring 2017
    Viral gene therapy Lecture 25 Biology 3310/4310 Virology Spring 2017 “Trust science, not scientists” --DICKSON DESPOMMIER Virus vectors • Gene therapy: deliver a gene to patients who lack the gene or carry defective versions • To deliver antigens (viral vaccines) • Viral oncotherapy • Research uses Virology Lectures 2017 • Prof. Vincent Racaniello • Columbia University A Poliovirus C (+) mRNA I AnAOH3’ Infection Cultured cells (+) Viral RNA Vaccinia virus T7 Viral DNA 5' Transfection 3' encoding T7 Plasmids expressing N, P, L, RNA polymerase and (+) strand RNA cDNA synthesis and cloning Infection Transfection Transfection Transfection Poliovirus 5' Progeny DNA 3' In vitro RNA (+) strand RNA synthesis transcript Virology Lectures 2017 • Prof. Vincent Racaniello • Columbia University ©Principles of Virology, ASM Press B Viral protein PB1 Infectious virus Translation D (+) mRNA c AnAOH3’ (+) mRNA I AnAOH3’ RNA polymerase II (splicing) Plasmid Plasmid Pol II Viral DNA Pol I T7 Viral DNA RNA polymerase I (–) vRNAs 8-plasmid 10-plasmid transfection transfection Infectious virus Infectious virus ScEYEnce Studios Principles of Virology, 4e Volume 01 Fig. 03.12 10-28-14 Adenovirus vectors Virology Lectures 2017 • Prof. Vincent Racaniello • Columbia University ©Principles of Virology, ASM Press Adenovirus vectors • Efficiently infect post-mitotic cells • Fast (48 h) onset of gene expression • Episomal, minimal risk of insertion mutagenesis • Up to 37 kb capacity • Pure, concentrated preps routine • >50 human serotypes, animal serotypes • Drawback: immunity Virology Lectures 2017 • Prof. Vincent Racaniello • Columbia University Adenovirus vectors • First generation vectors: E1, E3 deleted • E1: encodes T antigens (Rb, p53) • E3: not essential, immunomodulatory proteins Virology Lectures 2017 • Prof. Vincent Racaniello • Columbia University http://edoc.ub.uni-muenchen.de/13826/ Adenovirus vectors • Second generation vectors: E1, E3 deleted, plus deletions in E2 or E4 • More space for transgene Virology Lectures 2017 • Prof.
    [Show full text]
  • Archives of Virology
    Archives of Virology Binomial nomenclature for virus species: a long view --Manuscript Draft-- Manuscript Number: ARVI-D-20-00436R2 Full Title: Binomial nomenclature for virus species: a long view Article Type: Virology Division News: Virus Taxonomy/Nomenclature Keywords: virus taxonomy; species definition; virus definition; virions; metagenomes; Latinized binomials Corresponding Author: Adrian John Gibbs, Ph.D. ex-Australian National University Canberra, ACT AUSTRALIA Corresponding Author Secondary Information: Corresponding Author's Institution: ex-Australian National University Corresponding Author's Secondary Institution: First Author: Adrian John Gibbs, Ph.D. First Author Secondary Information: Order of Authors: Adrian John Gibbs, Ph.D. Order of Authors Secondary Information: Funding Information: Abstract: On several occasions over the past century it has been proposed that Latinized (Linnaean) binomial names (LBs) should be used for the formal names of virus species, and the opinions expressed in the early debates are still valid. The use of LBs would be sensible for the current Taxonomy if confined to the names of the specific and generic taxa of viruses of which some basic biological properties are known (e.g. ecology, hosts and virions); there is no advantage filling the literature with formal names for partly described viruses or virus-like gene sequences. The ICTV should support the time-honoured convention that LBs are only used with biological (phylogenetic) classifications. Recent changes have left the ICTV Taxonomy and
    [Show full text]
  • View of "Bird Flu: a Virus of Our Own Hatching" by Michael Greger Chengfeng Qin* and Ede Qin
    Virology Journal BioMed Central Book report Open Access Review of "Bird Flu: A Virus of Our Own Hatching" by Michael Greger Chengfeng Qin* and Ede Qin Address: State Key Laboratory of Pathogen and Biosecurity, Institute of Microbiology and Epidemiology, Beijing 100071, China Email: Chengfeng Qin* - [email protected]; Ede Qin - [email protected] * Corresponding author Published: 30 April 2007 Received: 2 February 2007 Accepted: 30 April 2007 Virology Journal 2007, 4:38 doi:10.1186/1743-422X-4-38 This article is available from: http://www.virologyj.com/content/4/1/38 © 2007 Qin and Qin; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Book details behavior can cause new plagues, changes in human Michael Greger: Bird Flu: A Virus of Our Own Hatching USA: behavior may prevent them in the future". Lantern Books; 2006:465. ISBN 1590560981 Review Yes, we can change. In the last sections of the book, Greger Due to my responsibility as member of advisory commit- carefully details how to protect ourselves in the very likely tee on pandemic influenza, I regard any new publication event that a bird flu pandemic begins to sweep the world on bird flu with special enthusiasm. A book that recently and how to prevent future pandemics. Dr. Greger's simple caught my eye was one by Michael Greger titled Bird Flu: and practical suggestions are invaluable for both nation A Virus of Our Own Hatching.
    [Show full text]
  • Virology Journal Biomed Central
    Virology Journal BioMed Central Short report Open Access Genomic presence of recombinant porcine endogenous retrovirus in transmitting miniature swine Stanley I Martin, Robert Wilkinson and Jay A Fishman* Address: Infectious Disease Division, Massachusetts General Hospital, Boston, MA 02114, USA Email: Stanley I Martin - [email protected]; Robert Wilkinson - [email protected]; Jay A Fishman* - [email protected] * Corresponding author Published: 02 November 2006 Received: 22 June 2006 Accepted: 02 November 2006 Virology Journal 2006, 3:91 doi:10.1186/1743-422X-3-91 This article is available from: http://www.virologyj.com/content/3/1/91 © 2006 Martin et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract The replication of porcine endogenous retrovirus (PERV) in human cell lines suggests a potential infectious risk in xenotransplantation. PERV isolated from human cells following cocultivation with porcine peripheral blood mononuclear cells is a recombinant of PERV-A and PERV-C. We describe two different recombinant PERV-AC sequences in the cellular DNA of some transmitting miniature swine. This is the first evidence of PERV-AC recombinant virus in porcine genomic DNA that may have resulted from autoinfection following exogenous viral recombination. Infectious risk in xenotransplantation will be defined by the activity of PERV loci in vivo. Background been detected previously in the genomes of transmitting Xenotransplantation using inbred miniature swine is a swine [5,10].
    [Show full text]
  • 1.Department of Virology Ⅰ
    1.Department of Virology Ⅰ 8) Watanabe S, Ueda N, Iha K, Joseph SM,Fujii H, Phillip A,Mizutani T, Maeda K,Yamane D,Azab W, 1) Tobiume M, Sato Y, Katano H, Nakajima N, Tanaka K, Kato K, Kyuwa S,Tohya Y,Yoshikawa Y, Akashi H. Noguchi A, Inoue S, Hasegawa H, Iwasa, Y., Tanaka J, Detection of a new bat gammaherpesvirus in the Philippines. Hayashi H, Yoshida S, Kurane I, Sata T. Rabies virus Virus Genes 39:90-93, 2009. dissemination in neural tissues of autopsy cases due to rabies imported into Japan from the Philippines: 9) Sunohara M,Morikawa S,Murata H,Fuse A,Sato I. immunohistochemistry. Pathology International 59:555-566, Modulation mechanism of c-Mpl promoter activity in 2009. megakaryoblastic cells. Okajimas Folia Anatomica Japonica 86:89-91, 2009. 2) Sah OP, Subedi S, Morita K, Inoue S, Kurane I, Pandey BD. Serological study of dengue virus infection in Terai 10) Iizuka I, Saijo M, Shiota T, Ami Y, Suzaki Y, region, Nepal. Nepal Medical College Journal 11:104-106, Nagata N, Hasegawa H, Sakai K, Fukushi S, Mizutani 2009. T, Ogata M, Nakauchi M, Kurane I, Mizuguchi M, Morikawa S. Loop-mediated isothermal amplification-based 3) Kurane I. BSL4 facilities in anti-infectious disease diagnostic assay for monkeypox virus infections. Journal of measures. Journal of Disaster Research 4:352-355, 2009. Medical Virology 81:1102-1108, 2009. 4) Kurane I: The emerging and forecasted effect of climate 11) Yamao T, Eshita Y, Kihara Y, Satho T, Kuroda M, change on human health. Journal of Health Science Sekizuka T, Nishimura M, Sakai K, Watanabe S, Akashi 55:865-869, 2009.
    [Show full text]
  • Virology Techniques
    Chapter 5 - Lesson 4 Virology Techniques Introduction Virology is a field within microbiology that encom- passes the study of viruses and the diseases they cause. In the laboratory, viruses have served as useful tools to better understand cellular mechanisms. The purpose of this lesson is to provide a general overview of laboratory techniques used in the identification and study of viruses. A Brief History In the late 19th century the independent work of Dimitri Ivanofsky and Martinus Beijerinck marked the begin- This electron micrograph depicts an influenza virus ning of the field of virology. They showed that the agent particle or virion. CDC. responsible for causing a serious disease in tobacco plants, tobacco mosaic virus, was able to pass through filters known to retain bacteria and the filtrate was able to cause disease in new plants. In 1898, Friedrich Loef- fler and Paul Frosch applied the filtration criteria to a disease in cattle known as foot and mouth disease. The filtration criteria remained the standard method used to classify an agent as a virus for nearly 40 years until chemical and physical studies revealed the structural basis of viruses. These attributes have become the ba- sis of many techniques used in the field today. Background All organisms are affected by viruses because viruses are capable of infecting and causing disease in all liv- ing species. Viruses affect plants, humans, and ani- mals as well as bacteria. A virus that infects bacteria is known as a bacteriophage and is considered the Bacteriophage. CDC. Chapter 5 - Human Health: Real Life Example (Influenza) 1 most abundant biological entity on the planet.
    [Show full text]
  • Viral Vectors 101 a Desktop Resource
    Viral Vectors 101 A Desktop Resource Created and Compiled by Addgene www.addgene.org August 2018 (1st Edition) Viral Vectors 101: A Desktop Resource (1st Edition) Viral Vectors 101: A desktop resource This page intentionally left blank. 2 Chapter 1 - What Are Fluorescent Proteins? ViralViral Vectors Vector 101: A Desktop Resource (1st Edition) ViralTHE VectorsHISTORY 101: OFIntroduction FLUORESCENT to this desktop PROTEINS resource (CONT’D)By Tyler J. Ford | July 16, 2018 Dear Reader, If you’ve worked with mammalian cells, it’s likely that you’ve worked with viral vectors. Viral vectors are engineered forms of mammalian viruses that make use of natural viral gene delivery machineries and that are optimized for safety and delivery. These incredibly useful tools enable you to easily deliver genes to mammalian cells and to control gene expression in a variety of ways. Addgene has been distributing viral vectors since nearly its inception in 2004. Since then, our viral Cummulative ready-to-use virus distribution through June 2018. vector collection has grown to include retroviral vectors, lentiviral vectors, adenoviral vectors, and adeno-associated viral vectors. To further enable researchers, we started our viral service in 2017. Through this service, we distribute ready-to- use, quality-controlled AAV and lentivirus for direct use in experiments. As you can see in the chart to the left, this service is already very popular and its use has grown exponentially. With this Viral Vectors 101 eBook, we are proud to further expand our viral vector offerings. Within it, you’ll find nearly all of our viral vector educational content in a single downloadable resource.
    [Show full text]
  • A Bibliometric Analysis of Virology in Colombia (2000–2013)
    Original Article Virology research in a Latin American developing country: a bibliometric analysis of virology in Colombia (2000–2013) Julian Ruiz-Saenz1,3, Marlen Martinez-Gutierrez1,2,3 1 Grupo de Investigación en Ciencias Animales-GRICA, Facultad de Medicina Veterinaria y Zootecnia, Universidad Cooperativa de Colombia, Bucaramanga, Colombia 2 Grupo de Investigación Infettare, Facultad de Medicina, Universidad Cooperativa de Colombia, Medellín, Colombia 3 Asociación Colombiana de Virología, Bogotá, Colombia Abstract Introduction: Bibliometric analysis demonstrates that the virology research in Latin America has increased. For this reason, the objective of this study was to evaluate Colombian publications on viruses and viral diseases in indexed journals during the period from 2000 to 2013. Methodology: The bibliographic data were collected from MedLine, SciELO, LILACS and Scopus databases. The database was constructed in Excel descriptive statistics. The SCImago Journal Rank (SJR) was evaluated using the SCImago Journal & Country Rank in 2013 and was used as an indicator of the quality of the journals used by the Colombian researchers. Results: The total number of papers published was 711, of which 40.4% were published in local journals, and 59.6% were published in foreign journals. Most (89.2%) were original papers. Moreover, 34.2% of the papers were published in collaboration with international researchers, with the United States being the most represented. Of the journals used, 85.6% had an SJR, and 14.4% did not. The median SJR of the papers was 0.789, and the median of the papers with international collaborators was higher compared to the SJR of the papers without international collaboration.
    [Show full text]
  • Taxonomy and Comparative Virology of the Influenza Viruses
    2 Taxonomy and Comparative Virology of the Influenza Viruses INTRODUCTION Viral taxonomy has evolved slowly (and often contentiously) from a time when viruses were identified at the whim of the investigator by place names, names of persons (investigator or patient), sigla, Greco-Latin hybrid names, host of origin, or name of associated disease. Originally studied by pathologists and physicians, viruses were first named for the diseases they caused or the lesions they induced. Yellow fever virus turned its victims yellow with jaundice, and the virus now known as poliovirus destroyed the anterior horn cells or gray (polio) matter of the spinal cord. But the close kinship of polioviruses with coxsackievirus B1, the cause of the epidemic pleurodynia, is not apparent from names derived variously from site of pathogenic lesion and place of original virus isolation (Cox­ sackie, New York). In practice, many of the older names of viruses remain in common use, but the importance of a formal, more regularized approach to viral classification has been increasingly recognized by students and practitioners of virology as more basic information has become available about the nature of viruses. Accordingly, the International Committee on Taxonomy of Viruses has devised a generally ac­ cepted system for the classification and nomenclature of viruses that serves the needs of comparative virology in formulating regular guidelines for viral nomen­ clature. Although this nomenclature remains highly diversified and at times in­ consistent, retaining many older names, it affirms "an effort ... toward a latinized nomenclature" (Matthews, 1981) and places primary emphasis on virus structure and replication in viral classification.
    [Show full text]
  • Virology, Transmission, and Pathogenesis of SARS-Cov-2
    PRACTICE BMJ: first published as 10.1136/bmj.m3862 on 23 October 2020. Downloaded from 1 Division of Infection and Global CLINICAL UPDATE Health Research, School of Medicine, University of St Andrews, St Andrews, UK Virology, transmission, and pathogenesis of SARS-CoV-2 2 Specialist Virology Laboratory, Royal Muge Cevik, 1 , 2 Krutika Kuppalli, 3 Jason Kindrachuk, 4 Malik Peiris5 Infirmary of Edinburgh, Edinburgh, UK and Regional Infectious Diseases Unit, What you need to know viral response phase and an inflammatory second Western General Hospital, Edinburgh, phase. Most clinical presentations are mild, and the UK • SARS-CoV-2 is genetically similar to SARS-CoV-1, but typical pattern of covid-19 more resembles an 3 Division of Infectious Diseases, characteristics of SARS-CoV-2—eg, structural influenza-like illness—which includes fever, cough, Medical University of South Carolina, differences in its surface proteins and viral load malaise, myalgia, headache, and taste and smell Charleston, SC, USA kinetics—may help explain its enhanced rate of disturbance—rather than severe pneumonia transmission 4 Laboratory of Emerging and (although emerging evidence about long term Re-Emerging Viruses, Department of • In the respiratory tract, peak SARS-CoV-2 load is consequences is yet to be understood in detail).1 In Medical Microbiology, University of observed at the time of symptom onset or in the first this review, we provide a broad update on the Manitoba, Winnipeg, MB, Canada week of illness, with subsequent decline thereafter, emerging understanding of SARS-CoV-2 indicating the highest infectiousness potential just 5 School of Public Health, LKS Faculty pathophysiology, including virology, transmission before or within the first five days of symptom onset of Medicine, The University of Hong dynamics, and the immune response to the virus.
    [Show full text]