RESEARCH ARTICLE Ancestral State Reconstruction Reveals Rampant Homoplasy of Diagnostic Morphological Characters in Urticaceae, Conflicting with Current Classification Schemes Zeng-Yuan Wu1,2,5, Richard I. Milne3, Chia-Jui Chen4, Jie Liu1,2, Hong Wang2*, De- a11111 Zhu Li1,2* 1 Key Laboratory for Plant and Biodiversity of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China, 2 Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan 650201, China, 3 Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JH, United Kingdom, 4 State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China, 5 University of the Chinese Academy of Sciences, Beijing 100049, China OPEN ACCESS *
[email protected] (D-ZL);
[email protected] (HW) Citation: Wu Z-Y, Milne RI, Chen C-J, Liu J, Wang H, Li D-Z (2015) Ancestral State Reconstruction Reveals Rampant Homoplasy of Diagnostic Morphological Characters in Urticaceae, Conflicting with Current Abstract Classification Schemes. PLoS ONE 10(11): e0141821. doi:10.1371/journal.pone.0141821 Urticaceae is a family with more than 2000 species, which contains remarkable morphologi- Editor: Helge Thorsten Lumbsch, Field Museum of cal diversity. It has undergone many taxonomic reorganizations, and is currently the subject Natural History, UNITED STATES of further systematic studies. To gain more resolution in systematic studies and to better Received: July 14, 2015 understand the general patterns of character evolution in Urticaceae, based on our previous phylogeny including 169 accessions comprising 122 species across 47 Urticaceae genera, Accepted: October 13, 2015 we examined 19 diagnostic characters, and analysed these employing both maximum-par- Published: November 3, 2015 simony and maximum-likelihood approaches.