Maullinia Ectocarpii Gen. Et Sp. Nov. (Plasmodiophorea), an Intracellular
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Algae & Marine Plants of Point Reyes
Algae & Marine Plants of Point Reyes Green Algae or Chlorophyta Genus/Species Common Name Acrosiphonia coalita Green rope, Tangled weed Blidingia minima Blidingia minima var. vexata Dwarf sea hair Bryopsis corticulans Cladophora columbiana Green tuft alga Codium fragile subsp. californicum Sea staghorn Codium setchellii Smooth spongy cushion, Green spongy cushion Trentepohlia aurea Ulva californica Ulva fenestrata Sea lettuce Ulva intestinalis Sea hair, Sea lettuce, Gutweed, Grass kelp Ulva linza Ulva taeniata Urospora sp. Brown Algae or Ochrophyta Genus/Species Common Name Alaria marginata Ribbon kelp, Winged kelp Analipus japonicus Fir branch seaweed, Sea fir Coilodesme californica Dactylosiphon bullosus Desmarestia herbacea Desmarestia latifrons Egregia menziesii Feather boa Fucus distichus Bladderwrack, Rockweed Haplogloia andersonii Anderson's gooey brown Laminaria setchellii Southern stiff-stiped kelp Laminaria sinclairii Leathesia marina Sea cauliflower Melanosiphon intestinalis Twisted sea tubes Nereocystis luetkeana Bull kelp, Bullwhip kelp, Bladder wrack, Edible kelp, Ribbon kelp Pelvetiopsis limitata Petalonia fascia False kelp Petrospongium rugosum Phaeostrophion irregulare Sand-scoured false kelp Pterygophora californica Woody-stemmed kelp, Stalked kelp, Walking kelp Ralfsia sp. Silvetia compressa Rockweed Stephanocystis osmundacea Page 1 of 4 Red Algae or Rhodophyta Genus/Species Common Name Ahnfeltia fastigiata Bushy Ahnfelt's seaweed Ahnfeltiopsis linearis Anisocladella pacifica Bangia sp. Bossiella dichotoma Bossiella -
Real-Time Dynamics of Plasmodium NDC80 Reveals Unusual Modes of Chromosome Segregation During Parasite Proliferation Mohammad Zeeshan1,*, Rajan Pandey1,*, David J
© 2020. Published by The Company of Biologists Ltd | Journal of Cell Science (2021) 134, jcs245753. doi:10.1242/jcs.245753 RESEARCH ARTICLE SPECIAL ISSUE: CELL BIOLOGY OF HOST–PATHOGEN INTERACTIONS Real-time dynamics of Plasmodium NDC80 reveals unusual modes of chromosome segregation during parasite proliferation Mohammad Zeeshan1,*, Rajan Pandey1,*, David J. P. Ferguson2,3, Eelco C. Tromer4, Robert Markus1, Steven Abel5, Declan Brady1, Emilie Daniel1, Rebecca Limenitakis6, Andrew R. Bottrill7, Karine G. Le Roch5, Anthony A. Holder8, Ross F. Waller4, David S. Guttery9 and Rita Tewari1,‡ ABSTRACT eukaryotic organisms to proliferate, propagate and survive. During Eukaryotic cell proliferation requires chromosome replication and these processes, microtubular spindles form to facilitate an equal precise segregation to ensure daughter cells have identical genomic segregation of duplicated chromosomes to the spindle poles. copies. Species of the genus Plasmodium, the causative agents of Chromosome attachment to spindle microtubules (MTs) is malaria, display remarkable aspects of nuclear division throughout their mediated by kinetochores, which are large multiprotein complexes life cycle to meet some peculiar and unique challenges to DNA assembled on centromeres located at the constriction point of sister replication and chromosome segregation. The parasite undergoes chromatids (Cheeseman, 2014; McKinley and Cheeseman, 2016; atypical endomitosis and endoreduplication with an intact nuclear Musacchio and Desai, 2017; Vader and Musacchio, 2017). Each membrane and intranuclear mitotic spindle. To understand these diverse sister chromatid has its own kinetochore, oriented to facilitate modes of Plasmodium cell division, we have studied the behaviour movement to opposite poles of the spindle apparatus. During and composition of the outer kinetochore NDC80 complex, a key part of anaphase, the spindle elongates and the sister chromatids separate, the mitotic apparatus that attaches the centromere of chromosomes to resulting in segregation of the two genomes during telophase. -
Substrate and Cell Fusion Influence on Slime Mold Network Dynamics
www.nature.com/scientificreports OPEN Substrate and cell fusion infuence on slime mold network dynamics Fernando Patino‑Ramirez1*, Chloé Arson1,3 & Audrey Dussutour2,3* The acellular slime mold Physarum polycephalum provides an excellent model to study network formation, as its network is remodelled constantly in response to mass gain/loss and environmental conditions. How slime molds networks are built and fuse to allow for efcient exploration and adaptation to environmental conditions is still not fully understood. Here, we characterize the network organization of slime molds exploring homogeneous neutral, nutritive and adverse environments. We developed a fully automated image analysis method to extract the network topology and followed the slime molds before and after fusion. Our results show that: (1) slime molds build sparse networks with thin veins in a neutral environment and more compact networks with thicker veins in a nutritive or adverse environment; (2) slime molds construct long, efcient and resilient networks in neutral and adverse environments, whereas in nutritive environments, they build shorter and more centralized networks; and (3) slime molds fuse rapidly and establish multiple connections with their clone‑mates in a neutral environment, whereas they display a late fusion with fewer connections in an adverse environment. Our study demonstrates that slime mold networks evolve continuously via pruning and reinforcement, adapting to diferent environmental conditions. Transportation networks where fuids are transported from one point of the network to another are ubiquitous in nature. Vascular networks in animals, plants, fungi and slime molds are commonly cited examples of such natural transportation networks. Tese networks are ofen studied as static architectures, although most of them have the ability to alter their morphology in space and time in response to environmental conditions1. -
S41598-020-68694-9.Pdf
www.nature.com/scientificreports OPEN Delayed cytokinesis generates multinuclearity and potential advantages in the amoeba Acanthamoeba castellanii Nef strain Théo Quinet1, Ascel Samba‑Louaka2, Yann Héchard2, Karine Van Doninck1 & Charles Van der Henst1,3,4,5* Multinuclearity is a widespread phenomenon across the living world, yet how it is achieved, and the potential related advantages, are not systematically understood. In this study, we investigate multinuclearity in amoebae. We observe that non‑adherent amoebae are giant multinucleate cells compared to adherent ones. The cells solve their multinuclearity by a stretchy cytokinesis process with cytosolic bridge formation when adherence resumes. After initial adhesion to a new substrate, the progeny of the multinucleate cells is more numerous than the sibling cells generated from uninucleate amoebae. Hence, multinucleate amoebae show an advantage for population growth when the number of cells is quantifed over time. Multiple nuclei per cell are observed in diferent amoeba species, and the lack of adhesion induces multinuclearity in diverse protists such as Acanthamoeba castellanii, Vermamoeba vermiformis, Naegleria gruberi and Hartmannella rhysodes. In this study, we observe that agitation induces a cytokinesis delay, which promotes multinuclearity. Hence, we propose the hypothesis that multinuclearity represents a physiological adaptation under non‑adherent conditions that can lead to biologically relevant advantages. Te canonical view of eukaryotic cells is usually illustrated by an uninucleate organization. However, in the liv- ing world, cells harbouring multiple nuclei are common. Tis multinuclearity can have diferent origins, being either generated (i) by fusion events between uninucleate cells or by (ii) uninucleate cells that replicate their DNA content without cytokinesis. -
Nuclear and Genome Dynamics in Multinucleate Ascomycete Fungi
Current Biology 21, R786–R793, September 27, 2011 ª2011 Elsevier Ltd All rights reserved DOI 10.1016/j.cub.2011.06.042 Nuclear and Genome Dynamics Review in Multinucleate Ascomycete Fungi Marcus Roper1,2, Chris Ellison3, John W. Taylor3, to enhance phenotypic plasticity [5] and is also thought to and N. Louise Glass3,* contribute to fungal virulence [6–8]. Recent and ongoing work reveals two fundamental chal- lenges of multinucleate fungal lifestyles, both in the presence Genetic variation between individuals is essential to evolu- and absence of genotypic diversity — namely, the coordina- tion and adaptation. However, intra-organismic genetic tion of populations of nuclei for growth and other behaviors, variation also shapes the life histories of many organisms, and the suppression of nucleotypic competition during including filamentous fungi. A single fungal syncytium can reproduction and dispersal. The potential for a mycelium to harbor thousands or millions of mobile and potentially harbor fluctuating proportions and distributions of multiple genotypically different nuclei, each having the capacity genotypes led some 20th century mycologists to argue for to regenerate a new organism. Because the dispersal of life-history models that focused on nuclei as the unit of asexual or sexual spores propagates individual nuclei in selection, and on the role of nuclear cooperation and compe- many of these species, selection acting at the level of tition in shaping mycelium growth and behavior [9,10].In nuclei creates the potential for competitive and coopera- particular, nuclear totipotency creates potential for conflict tive genome dynamics. Recent work in Neurospora crassa between heterogeneous nuclear populations within a myce- and Sclerotinia sclerotiorum has illuminated how nuclear lium [11,12]. -
Roles for IFT172 and Primary Cilia in Cell Migration, Cell Division, and Neocortex Development
fcell-07-00287 November 26, 2019 Time: 12:22 # 1 ORIGINAL RESEARCH published: 26 November 2019 doi: 10.3389/fcell.2019.00287 Roles for IFT172 and Primary Cilia in Cell Migration, Cell Division, and Neocortex Development Michal Pruski1,2,3,4,5†‡, Ling Hu3,5†, Cuiping Yang4, Yubing Wang4, Jin-Bao Zhang6, Lei Zhang4,5, Ying Huang3,4,5, Ann M. Rajnicek5, David St Clair5, Colin D. McCaig5, Bing Lang1,2,5* and Yu-Qiang Ding3,4* Edited by: 1 Department of Psychiatry, The Second Xiangya Hospital, Central South University, Changsha, China, 2 National Clinical Eiman Aleem, Research Center for Mental Disorders, Changsha, China, 3 State Key Laboratory of Medical Neurobiology and MOE The University of Arizona, Frontiers Center for Brain Science, Institutes of Brain Science, Fudan University, Shanghai, China, 4 Key Laboratory United States of Arrhythmias, Ministry of Education, East Hospital, Department of Anatomy and Neurobiology, Collaborative Innovation Reviewed by: Centre for Brain Science, Tongji University School of Medicine, Shanghai, China, 5 School of Medicine, Medical Sciences Surya Nauli, and Nutrition, Institute of Medical Sciences, University of Aberdeen, Aberdeen, United Kingdom, 6 Department of Histology University of California, Irvine, and Embryology, Institute of Neuroscience, Wenzhou Medical University, Wenzhou, China United States Andrew Paul Jarman, The University of Edinburgh, The cilium of a cell translates varied extracellular cues into intracellular signals that United Kingdom control embryonic development and organ function. The dynamic maintenance of *Correspondence: ciliary structure and function requires balanced bidirectional cargo transport involving Bing Lang intraflagellar transport (IFT) complexes. IFT172 is a member of the IFT complex B, and [email protected] Yu-Qiang Ding IFT172 mutation is associated with pathologies including short rib thoracic dysplasia, [email protected] retinitis pigmentosa and Bardet-Biedl syndrome, but how it underpins these conditions † These authors have contributed is not clear. -
Keynote and Oral Papers1. Algal Diversity and Species Delimitation
European Journal of Phycology ISSN: 0967-0262 (Print) 1469-4433 (Online) Journal homepage: http://www.tandfonline.com/loi/tejp20 Keynote and Oral Papers To cite this article: (2015) Keynote and Oral Papers, European Journal of Phycology, 50:sup1, 22-120, DOI: 10.1080/09670262.2015.1069489 To link to this article: http://dx.doi.org/10.1080/09670262.2015.1069489 Published online: 20 Aug 2015. Submit your article to this journal Article views: 76 View related articles View Crossmark data Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=tejp20 Download by: [University of Kiel] Date: 22 September 2015, At: 02:13 Keynote and Oral Papers 1. Algal diversity and species delimitation: new tools, new insights 1KN.1 1KN.2 HOW COMPLEMENTARY BARCODING AND GENERATING THE DIVERSITY - POPULATION GENETICS ANALYSES CAN UNCOVERING THE SPECIATION HELP SOLVE TAXONOMIC QUESTIONS AT MECHANISMS IN FRESHWATER AND SHORT PHYLOGENETIC DISTANCES: THE TERRESTRIAL MICROALGAE EXAMPLE OF THE BROWN ALGA Š PYLAIELLA LITTORALIS Pavel kaloud ([email protected]) Christophe Destombe1 ([email protected]), Department of Botany, Charles Univrsity in Prague, Alexandre Geoffroy1 ([email protected]), Prague 12801, Czech Republic Line Le Gall2 ([email protected]), Stéphane Mauger3 ([email protected]) and Myriam Valero4 Species are one of the fundamental units of biology, ([email protected]) comparable to genes or cells. Understanding the general patterns and processes of speciation can facilitate the 1Station Biologique de Roscoff, Sorbonne Universités, formulation and testing of hypotheses in the most impor- Université Pierre et Marie Curie, CNRS, Roscoff tant questions facing biology today, including the fitof 29688, France; 2Institut de Systématique, Evolution, organisms to their environment and the dynamics and Biodiversité, UMR 7205 CNRS-EPHE-MNHN-UPMC, patterns of organismal diversity. -
Barcoding of Cryptic Stages of Marine Brown Algae Isolated from Incubated Substratum Reveals High Diversity in Acinetosporaceae (Ectocarpales, Phaeophyceae)1
Cryptogamie, Algologie, 2015, 36 (1): 3-29 © 2015 Adac. Tous droits réservés Barcoding of cryptic stages of marine brown algae isolated from incubated substratum reveals high diversity in Acinetosporaceae (Ectocarpales, Phaeophyceae)1 Akira F. PETERS a*, Lucía COUCEIRO b, Konstantinos TSIAMIS c, Frithjof C. KÜPPER d & Myriam VALERO b aBezhin Rosko, 29250 Santec, France and FR2424, Station Biologique, 29682 Roscoff Cedex, France bUMI EBEA 3614, Evolutionary Biology and Ecology of Algae, CNRS, Sorbonne Universités UPMC, Station Biologique de Roscoff, 29688 Roscoff Cedex, France cHellenic Centre for Marine Research (HCMR), Institute of Oceanography, Anavyssos 19013, Attica, Greece dOceanlab, University of Aberdeen, Main Street, Newburgh AB41 6AA, Scotland, UK Abstract – To identify cryptic stages of marine brown macroalgae present in the “bank of microscopic forms”, we incubated natural substrata of different geographical origins and isolated emerging Phaeophyceae into clonal cultures. A total of 431 clones were subsequently identified by barcoding using 5’-COI. A proportion of 98% of the isolates belonged to the Ectocarpales. The distribution of pairwise genetic distances revealed a K2P divergence of 1.8% as species-level cut-off. Using this threshold, the samples were ascribed to 83 different species, 39 (47%) of which were identified through reference sequences or morphology. In the Ectocarpaceae, 16 lineages of Ectocarpus fulfilled the barcode criterion for different species, while three putative new species were detected. In the Chordariaceae, numerous microthalli were microstages of known macroscopic taxa. A separate cluster contained Hecatonema maculans and other microscopic species. Taxa traditionally classified in Acinetosporaceae were split in two species-rich groups containing Pylaiella and Hincksia in one and Acinetospora in the other. -
The Marine Macroalgae of Cabo Verde Archipelago: an Updated Checklist
Arquipelago - Life and Marine Sciences ISSN: 0873-4704 The marine macroalgae of Cabo Verde archipelago: an updated checklist DANIELA GABRIEL AND SUZANNE FREDERICQ Gabriel, D. and S. Fredericq 2019. The marine macroalgae of Cabo Verde archipelago: an updated checklist. Arquipelago. Life and Marine Sciences 36: 39 - 60. An updated list of the names of the marine macroalgae of Cabo Verde, an archipelago of ten volcanic islands in the central Atlantic Ocean, is presented based on existing reports, and includes the addition of 36 species. The checklist comprises a total of 372 species names, of which 68 are brown algae (Ochrophyta), 238 are red algae (Rhodophyta) and 66 green algae (Chlorophyta). New distribution records reveal the existence of 10 putative endemic species for Cabo Verde islands, nine species that are geographically restricted to the Macaronesia, five species that are restricted to Cabo Verde islands and the nearby Tropical Western African coast, and five species known to occur only in the Maraconesian Islands and Tropical West Africa. Two species, previously considered invalid names, are here validly published as Colaconema naumannii comb. nov. and Sebdenia canariensis sp. nov. Key words: Cabo Verde islands, Macaronesia, Marine flora, Seaweeds, Tropical West Africa. Daniela Gabriel1 (e-mail: [email protected]) and S. Fredericq2, 1CIBIO - Research Centre in Biodiversity and Genetic Resources, 1InBIO - Research Network in Biodiversity and Evolutionary Biology, University of the Azores, Biology Department, 9501-801 Ponta Delgada, Azores, Portugal. 2Department of Biology, University of Louisiana at Lafayette, Lafayette, Louisiana 70504-3602, USA. INTRODUCTION Schmitt 1995), with the most recent checklist for the archipelago published in 2005 by The Republic of Cabo Verde is an archipelago Prud’homme van Reine et al. -
And Desmarestia Viridis
Curr Genet (2006) 49: 47–58 DOI 10.1007/s00294-005-0031-4 RESEARCH ARTICLE Marie-Pierre Oudot-Le Secq Æ Susan Loiseaux-de Goe¨r Wytze T. Stam Æ Jeanine L. Olsen Complete mitochondrial genomes of the three brown algae (Heterokonta: Phaeophyceae) Dictyota dichotoma, Fucus vesiculosus and Desmarestia viridis Received: 8 August 2005 / Revised: 21 September 2005 / Accepted: 25 September 2005 / Published online: 30 November 2005 Ó Springer-Verlag 2005 Abstract We report the complete mitochondrial se- the base. Results support both multiple primary and quences of three brown algae (Dictyota dichotoma, Fucus multiple secondary acquisitions of plastids. vesiculosus and Desmarestia viridis) belonging to three phaeophycean lineages. They have circular mapping Keywords Brown algae Æ Evolution of mitochondria Æ organization and contain almost the same set of mito- Stramenopiles Æ Mitochondrial DNA Æ chondrial genes, despite their size differences (31,617, Secondary plastids 36,392 and 39,049 bp, respectively). These include the genes for three rRNAs (23S, 16S and 5S), 25–26 tRNAs, Abbreviation Mt: Mitochondrial 35 known mitochondrial proteins and 3–4 ORFs. This gene set complements two previously studied brown al- gal mtDNAs, Pylaiella littoralis and Laminaria digitata. Introduction Exceptions to the very similar overall organization in- clude the displacement of orfs, tRNA genes and four The stramenopiles (section Heterokonta) encompass protein-coding genes found at different locations in the both unicellular, e.g., the Bacillariophyceae (diatoms), D. dichotoma mitochondrial genome. We present a and multicellular lineages, e.g., the Phaeophyceae phylogenetic analysis based on ten concatenated genes (brown algae). They also comprise both heterotrophic (7,479 nucleotides) and 29 taxa. -
Laminariales), Resulting in the Circumscription of the New Families Akkesiphycaceae and Halosiphonaceae
Phycologia (2000) Volume 39 (5), 416--428 Published 7 February 2001 Molecular phylogeny of the brown algal genera Akkesiphycus and Halosiphon (Laminariales), resulting in the circumscription of the new families Akkesiphycaceae and Halosiphonaceae HIROSHI KAWAI1* AND HIDEAKl SASAKl2 IKobe University Research Center for Inland Seas, Rokkodai, Kobe 657-8501, Japan, 2Graduate School of Natural Sciences, Kobe University, Rokkodai, Kobe 657-8501, Japan H. KAWAI AND H. SASAKL 2000. Molecular phylogeny of the brown algal genera Akkesiphycus and Halosiphon (Laminari ales), resulting in the circumscription of the new families Akkesiphycaceae and Halosiphonaceae. Phycologia 39: 416-428. Phylogenetic relationships of Akkesiphycus lubricum with the Laminariales and related taxa were assessed by molecular phylogenetic analyses based on the Rubisco large subunit gene (rbcL), internal transcribed spacer regions (ITS I and ITS2), and 18S ribosomal DNA (l8s rDNA) sequence data. Among the three data sets, rbcL gene sequences gave the best resolution for indicating familial and ordinal relationships within the Laminariales and related taxa. Using rbcL data, Akkesiphycus showed the closest phylogenetic relationship to the Pseudochordaceae (Laminariales) and this was also supported by ITS and I8S rDNA data. The clade of Akkesiphycus and the Pseudochordaceae formed a sister group to the AlariaceaelLami nariaceaelLessoniaceae group and the Chordaceae of the Laminariales in maximum parsimony and neighbour-joining anal yses. Morphologically, Akkesiphycus differs significantly from other Laminariales in having gametophytes with anisogamous planogametes. However, considering that some laminarialean species have residual flagella in eggs and the close phylogenetic relationship with the Pseudochordaceae, as demonstrated in the present study, we propose to establish a new family, the Akkesiphycaceae Kawai & Sasaki Jam. -
In Situ Localisation of Mrnas to Decipher Plant and Algal
bioRxiv preprint doi: https://doi.org/10.1101/378794; this version posted September 26, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. 1 Biotrophic interactions disentangled: In situ localisation of mRNAs to decipher plant and 2 algal pathogen – host interactions at the single cell level. 3 4 Julia Badstöber1, Claire M. M. Gachon2, Jutta Ludwig-Müller3, Adolf M. Sandbichler4, Sigrid 5 Neuhauser1 6 7 1Institute of Microbiology, University of Innsbruck, A-6020 Innsbruck, Austria 8 2The Scottish Association for Marine Science, Scottish Marine Institute, Oban PA37 1QA, UK 9 3Institute of Botany, Technische Universität Dresden, D-01217 Dresden, Germany 10 4Institute of Zoology, University of Innsbruck, A-6020 Innsbruck, Austria 11 12 Author for correspondence: 13 Sigrid Neuhauser 14 Tel: +43 (0) 512 507-51259 15 Email: [email protected] 16 17 Summary 18 19 Plant-pathogen interactions follow spatiotemporal developmental dynamics where gene 20 expression in pathogen and host undergo crucial changes. It is of great interest to detect, 21 quantify and localise where and when key genes are active or inactive. Here, we adapt 22 single molecule FISH techniques to demonstrate presence and activity of mRNAs using 23 phytomyxids in their plant and algal host from laboratory and field materials. This 24 allowed to monitor and quantify the expression of genes from the clubroot pathogen 25 Plasmodiophora brassicae, several species of its Brassica hosts, and of several brown 26 algae, including the genome model Ectocarpus siliculosus, infected with the 27 phytomyxid Maullinia ectocarpii.