Benthic Species Distribution Linked to Morphological Features of a Barred Coast
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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
Appendix to Taxonomic Revision of Leopold and Rudolf Blaschkas' Glass Models of Invertebrates 1888 Catalogue, with Correction
http://www.natsca.org Journal of Natural Science Collections Title: Appendix to Taxonomic revision of Leopold and Rudolf Blaschkas’ Glass Models of Invertebrates 1888 Catalogue, with correction of authorities Author(s): Callaghan, E., Egger, B., Doyle, H., & E. G. Reynaud Source: Callaghan, E., Egger, B., Doyle, H., & E. G. Reynaud. (2020). Appendix to Taxonomic revision of Leopold and Rudolf Blaschkas’ Glass Models of Invertebrates 1888 Catalogue, with correction of authorities. Journal of Natural Science Collections, Volume 7, . URL: http://www.natsca.org/article/2587 NatSCA supports open access publication as part of its mission is to promote and support natural science collections. NatSCA uses the Creative Commons Attribution License (CCAL) http://creativecommons.org/licenses/by/2.5/ for all works we publish. Under CCAL authors retain ownership of the copyright for their article, but authors allow anyone to download, reuse, reprint, modify, distribute, and/or copy articles in NatSCA publications, so long as the original authors and source are cited. TABLE 3 – Callaghan et al. WARD AUTHORITY TAXONOMY ORIGINAL SPECIES NAME REVISED SPECIES NAME REVISED AUTHORITY N° (Ward Catalogue 1888) Coelenterata Anthozoa Alcyonaria 1 Alcyonium digitatum Linnaeus, 1758 2 Alcyonium palmatum Pallas, 1766 3 Alcyonium stellatum Milne-Edwards [?] Sarcophyton stellatum Kükenthal, 1910 4 Anthelia glauca Savigny Lamarck, 1816 5 Corallium rubrum Lamarck Linnaeus, 1758 6 Gorgonia verrucosa Pallas, 1766 [?] Eunicella verrucosa 7 Kophobelemon (Umbellularia) stelliferum -
Impact of Windfarm OWEZ on the Local Macrobenthos Communiy
Impact of windfarm OWEZ on the local macrobenthos community report OWEZ_R_261_T1_20090305 R. Daan, M. Mulder, M.J.N. Bergman Koninklijk Nederlands Instituut voor Zeeonderzoek (NIOZ) This project is carried out on behalf of NoordzeeWind, through a sub contract with Wageningen-Imares Contents Summary and conclusions 3 Introduction 5 Methods 6 Results boxcore 11 Results Triple-D dredge 13 Discussion 16 References 19 Tables 21 Figures 33 Appendix 1 44 Appendix 2 69 Appendix 3 72 Photo’s by Hendricus Kooi 2 Summary and conclusions In this report the results are presented of a study on possible short‐term effects of the construction of Offshore Windfarm Egmond aan Zee (OWEZ) on the composition of the local benthic fauna living in or on top of the sediment. The study is based on a benthic survey carried out in spring 2007, a few months after completion of the wind farm. During this survey the benthic fauna was sampled within the wind farm itself and in 6 reference areas lying north and south of it. Sampling took place mainly with a boxcorer, but there was also a limited programme with a Triple‐D dredge. The occurrence of possible effects was analyzed by comparing characteristics of the macrobenthos within the wind farm with those in the reference areas. A quantitative comparison of these characteristics with those observed during a baseline survey carried out 4 years before was hampered by a difference in sampling design and methodological differences. The conclusions of this study can be summarized as follows: 1. Based on the Bray‐Curtis index for percentage similarity there appeared to be great to very great similarity in the fauna composition of OWEZ and the majority of the reference areas. -
The Impact of Hydraulic Blade Dredging on a Benthic Megafaunal Community in the Clyde Sea Area, Scotland
Journal of Sea Research 50 (2003) 45–56 www.elsevier.com/locate/seares The impact of hydraulic blade dredging on a benthic megafaunal community in the Clyde Sea area, Scotland C. Hauton*, R.J.A. Atkinson, P.G. Moore University Marine Biological Station Millport (UMBSM), Isle of Cumbrae, Scotland, KA28 0EG, UK Received 4 December 2002; accepted 13 February 2003 Abstract A study was made of the impacts on a benthic megafaunal community of a hydraulic blade dredge fishing for razor clams Ensis spp. within the Clyde Sea area. Damage caused to the target species and the discard collected by the dredge as well as the fauna dislodged by the dredge but left exposed at the surface of the seabed was quantified. The dredge contents and the dislodged fauna were dominated by the burrowing heart urchin Echinocardium cordatum, approximately 60–70% of which survived the fishing process intact. The next most dominant species, the target razor clam species Ensis siliqua and E. arcuatus as well as the common otter shell Lutraria lutraria, did not survive the fishing process as well as E. cordatum, with between 20 and 100% of individuals suffering severe damage in any one dredge haul. Additional experiments were conducted to quantify the reburial capacity of dredged fauna that was returned to the seabed as discard. Approximately 85% of razor clams retained the ability to rapidly rebury into both undredged and dredged sand, as did the majority of those heart urchins Echinocardium cordatum which did not suffer aerial exposure. Individual E. cordatum which were brought to surface in the dredge collecting cage were unable to successfully rebury within three hours of being returned to the seabed. -
(Spatangoida) Abatus Agassizii
fmicb-11-00308 February 27, 2020 Time: 15:33 # 1 ORIGINAL RESEARCH published: 28 February 2020 doi: 10.3389/fmicb.2020.00308 Characterization of the Gut Microbiota of the Antarctic Heart Urchin (Spatangoida) Abatus agassizii Guillaume Schwob1,2*, Léa Cabrol1,3, Elie Poulin1 and Julieta Orlando2* 1 Laboratorio de Ecología Molecular, Instituto de Ecología y Biodiversidad, Facultad de Ciencias, Universidad de Chile, Santiago, Chile, 2 Laboratorio de Ecología Microbiana, Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile, Santiago, Chile, 3 Aix Marseille University, Univ Toulon, CNRS, IRD, Mediterranean Institute of Oceanography (MIO) UM 110, Marseille, France Abatus agassizii is an irregular sea urchin species that inhabits shallow waters of South Georgia and South Shetlands Islands. As a deposit-feeder, A. agassizii nutrition relies on the ingestion of the surrounding sediment in which it lives barely burrowed. Despite the low complexity of its feeding habit, it harbors a long and twice-looped digestive tract suggesting that it may host a complex bacterial community. Here, we characterized the gut microbiota of specimens from two A. agassizii populations at the south of the King George Island in the West Antarctic Peninsula. Using a metabarcoding approach targeting the 16S rRNA gene, we characterized the Abatus microbiota composition Edited by: David William Waite, and putative functional capacity, evaluating its differentiation among the gut content Ministry for Primary Industries, and the gut tissue in comparison with the external sediment. Additionally, we aimed New Zealand to define a core gut microbiota between A. agassizii populations to identify potential Reviewed by: Cecilia Brothers, keystone bacterial taxa. -
Role of Reef-Building, Ecosystem Engineering Polychaetes in Shallow Water Ecosystems
diversity Review Role of Reef-Building, Ecosystem Engineering Polychaetes in Shallow Water Ecosystems Martín Bruschetti 1,2 1 Instituto de Investigaciones Marinas y Costeras (IIMyC)-CONICET, Mar del Plata 7600, Argentina; [email protected] 2 Laboratorio de Ecología, Universidad Nacional de Mar del Plata, FCEyN, Laboratorio de Ecología 7600, Argentina Received: 15 June 2019; Accepted: 15 September 2019; Published: 17 September 2019 Abstract: Although the effect of ecosystem engineers in structuring communities is common in several systems, it is seldom as evident as in shallow marine soft-bottoms. These systems lack abiotic three-dimensional structures but host biogenic structures that play critical roles in controlling abiotic conditions and resources. Here I review how reef-building polychaetes (RBP) engineer their environment and affect habitat quality, thus regulating community structure, ecosystem functioning, and the provision of ecosystem services in shallow waters. The analysis focuses on different engineering mechanisms, such as hard substrate production, effects on hydrodynamics, and sediment transport, and impacts mediated by filter feeding and biodeposition. Finally, I deal with landscape-level topographic alteration by RBP. In conclusion, RBP have positive impacts on diversity and abundance of many species mediated by the structure of the reef. Additionally, by feeding on phytoplankton and decreasing water turbidity, RBP can control primary production, increase light penetration, and might alleviate the effects of eutrophication -
Effects of a Commercial Mussel Mytilus Edulis Lay on a Sublittoral, Soft Sediment Benthic Community
MARINE ECOLOGY PROGRESS SERIES Vol. 282: 185–191, 2004 Published November 16 Mar Ecol Prog Ser Effects of a commercial mussel Mytilus edulis lay on a sublittoral, soft sediment benthic community Julie Smith*, Susan E. Shackley School of Biological Sciences, University of Wales Swansea, Singleton Park, Swansea SA2 8PP, UK ABSTRACT: A commercial mussel Mytilus edulis lay was established in 1998 in western inner Swansea Bay (Wales, UK) in a shallow, sublittoral, high tidal energy environment, on a substrate which previously supported a diverse inshore, sand/muddy sand benthic community. Within a year of commencement of this fishery, a significant change in the species composition of the benthic com- munity occurred, with a decrease in the number of species and in the total number of individuals. The abundance of carnivorous and deposit feeding benthic species increased, whilst the mussels out- competed other benthic filter feeding organisms, preventing the settlement of these organisms by ingestion of the larvae, and removed other benthic organisms by physical smothering. KEY WORDS: Mussel lay · Benthos · Community effects · Coastal waters Resale or republication not permitted without written consent of the publisher INTRODUCTION Swansea Bay is a high-energy embayment, located on the northern coastline of the Bristol Channel, with Mussels Mytilus edulis L. are of growing commercial maximum depths of 20 m relative to chart datum (CD) importance, with increased numbers of applications for and an extensive, low gradient intertidal zone (Fig. 1). permission to site commercial mussel lays around the The tidal current takes the form of a rectilinear, revers- UK coast in shallow, sheltered, inshore environments. -
Linking Microbial Communities and Macrofauna Functional Diversity With
Linking microbial communities and macrofauna functional diversity with benthic ecosystem functioning in shallow coastal sediments, with an emphasis on nitrifiers and denitrifiers By Maryam Yazdani Foshtomi Promotors: Prof. Dr. Jan Vanaverbeke Prof. Dr. Magda Vincx Prof. Dr. Anne Willems Academic year 2016-2017 Thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Science: Marine Sciences Members of reading and examination committee Prof. Dr. Olivier De Clerck: Chairman Ghent University, Gent, Belgium Prof. Dr. Tom Moens: Secretary Ghent University, Gent, Belgium Prof. Dr. Nico Boon Ghent University, Gent, Belgium Dr. Melanie Sapp Heinrich-Heine-Universität Düsseldorf, Düsseldorf, Germany Prof. Dr. Frederik Leliaert Botanic Garden, Meise, Belgium Ghent University, Gent, Belgium Prof. Dr. Steven Degraer Royal Belgian Institute of Natural Sciences (RBINS), Brussels, Belgium Ghent University, Gent, Belgium Prof. Dr. Sofie Derycke Royal Belgian Institute of Natural Sciences (RBINS), Brussels, Belgium Ghent University, Gent, Belgium Prof. Dr. Jan Vanaverbeke (Promotor) Royal Belgian Institute of Natural Sciences (RBINS), Brussels, Belgium Ghent University, Gent, Belgium Prof. Dr. Magda Vincx (Promotor) Ghent University, Gent, Belgium Prof. Dr. Anne Willems (Promotor) Ghent University, Gent, Belgium ACKNOWLEDGEMENTS I am deeply indebted to all my family: my lovely spouse, Mehrshad; my dearest mother and father; my siblings especially my sister, Gilda; and my in-laws for their love and support at any conditions. I would like to express my appreciation to my promotors, Prof. Magda Vincx, Prof. Jan Vanaverbeke and Prof. Anne Willems for their help and support during my PhD. It was a great honour to work under their supervision. I would like to thank all members of reading and examination committee (Prof. -
Tube-Forming Polychaetes Enhance Invertebrate Diversity and Abundance in Sandy Sediments of Mozambique, Africa
African Journal of Marine Science 2011, 33(2): 327–332 Copyright © NISC (Pty) Ltd Printed in South Africa — All rights reserved AFRICAN JOURNAL OF MARINE SCIENCE ISSN 1814–232X EISSN 1814–2338 doi: 10.2989/1814232X.2011.600433 Short Communication Tube-forming polychaetes enhance invertebrate diversity and abundance in sandy sediments of Mozambique, Africa MS Thomsen1,2*, MF Muth3 and KJ McGlathery3 1 Marine Department, National Environmental Research Institute, University of Aarhus, PO Box 4000, Roskilde, Denmark 2 School of Plant Biology, University of Western Australia, Crawley 6009 WA, Australia 3 Department of Environmental Sciences, University of Virginia, 291 McCormick Rd, Clark Hall, Charlottesville, VA 22904, USA * Corresponding author, e-mail: [email protected] Manuscript received March 2011; accepted May 2011 In marine soft-bottom systems, polychaetes can increase habitat complexity by constructing rigid tubes (e.g. several onuphid species) that contrast with surrounding topographically flat sediments. These structures can provide predation refuges and increase larval settlement and thereby increase the richness and abundance of fauna. We collected invertebrate samples from an intertidal flat with low onuphid tube density (2.7 m–2) in Mozambique and document that more organisms (70 times higher mollusc abundances) and more species (15 times more mollusc species) were found associated with solitary tubes of an onuphid polychaete compared with surrounding sand habitats. These results are in agreement with tube versus sand comparisons from soft-bottom systems in the North Atlantic where polychaete tube densities are often much higher. Keywords: habitat formation, onuphid polychaete, species richness, western Indian Ocean Introduction Species that form or modify habitat, often referred to as (Thomsen et al. -
Processing of 13C-Labelled Phytoplankton in a Fine-Grained Sandy-Shelf Sediment (North Sea): Relative Importance of Different Macrofauna Species
MARINE ECOLOGY PROGRESS SERIES Vol. 297: 61–70, 2005 Published August 1 Mar Ecol Prog Ser Processing of 13C-labelled phytoplankton in a fine-grained sandy-shelf sediment (North Sea): relative importance of different macrofauna species Anja Kamp1, 2,*, Ursula Witte1, 3 1Max Planck Institute for Marine Microbiology, Celsiusstr. 1, 28359 Bremen, Germany 2Present address: Institute for Microbiology, University of Hannover, Schneiderberg 50, 30167 Hannover, Germany 3Present address: Oceanlab, University of Aberdeen, Newburgh, Aberdeen AB41 6AA, UK ABSTRACT: On-board and in situ experiments with 13C-labelled diatoms were carried out to inves- tigate the processing of algal carbon by the macrofauna community of a fine sandy-shelf site in the southern German Bight (North Sea). The time series (12, 30, 32 and 132 h incubations) was supple- mented by additional laboratory experiments on the role of the dominant macrofauna organism, the bivalve Fabulina fabula (Bivalvia: Tellinidae), for particulate organic matter subduction to deeper sediment layers. The specific uptake of algal 13C by macrofauna organisms was visible after 12 h and constantly increased during the incubation periods. F. fabula, a facultative (surface) deposit- and suspension-feeder, Lanice conchilega (Polychaeta: Terebellidae), a suspension-feeder and the (sur- face) deposit-feeder Echinocardium cordatum (Echinodermata: Spatangidae) were responsible for the majority of macrofaunal carbon processing. Predatory macrofauna organisms like Nephtys spp. (Polychaeta: Nephtyidae) also quickly became labelled. The rapid subduction of fresh organic matter by F. fabula down to ca. 4 to 7 cm sediment depth could be demonstrated, and it is suggested that entrainment by macrofauna in this fine-grained sand is much more efficient than advective transport. -
National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
National monitoring program for biodiversity and non-indigenous species in Egypt January 2016 1 TABLE OF CONTENTS page Acknowledgements 3 Preamble 4 Chapter 1: Introduction 8 Overview of Egypt Biodiversity 37 Chapter 2: Institutional and regulatory aspects 39 National Legislations 39 Regional and International conventions and agreements 46 Chapter 3: Scientific Aspects 48 Summary of Egyptian Marine Biodiversity Knowledge 48 The Current Situation in Egypt 56 Present state of Biodiversity knowledge 57 Chapter 4: Development of monitoring program 58 Introduction 58 Conclusions 103 Suggested Monitoring Program Suggested monitoring program for habitat mapping 104 Suggested marine MAMMALS monitoring program 109 Suggested Marine Turtles Monitoring Program 115 Suggested Monitoring Program for Seabirds 117 Suggested Non-Indigenous Species Monitoring Program 121 Chapter 5: Implementation / Operational Plan 128 Selected References 130 Annexes 141 2 AKNOWLEGEMENTS 3 Preamble The Ecosystem Approach (EcAp) is a strategy for the integrated management of land, water and living resources that promotes conservation and sustainable use in an equitable way, as stated by the Convention of Biological Diversity. This process aims to achieve the Good Environmental Status (GES) through the elaborated 11 Ecological Objectives and their respective common indicators. Since 2008, Contracting Parties to the Barcelona Convention have adopted the EcAp and agreed on a roadmap for its implementation. First phases of the EcAp process led to the accomplishment of 5 steps of the scheduled 7-steps process such as: 1) Definition of an Ecological Vision for the Mediterranean; 2) Setting common Mediterranean strategic goals; 3) Identification of an important ecosystem properties and assessment of ecological status and pressures; 4) Development of a set of ecological objectives corresponding to the Vision and strategic goals; and 5) Derivation of operational objectives with indicators and target levels. -
Marine Biodiversity: a Science Roadmap for Europe II Marine Biodiversity: a Science Roadmap for Europe
marine board future science brief #1 Marine Biodiversity: A Science Roadmap for Europe II marine biodiversity: a science roadmap for europe European Marine Board The Marine Board provides a pan-European platform for its member organizations to develop common priorities, to advance marine research, and to bridge the gap between science and policy in order to meet future marine science challenges and opportunities. The Marine Board was established in 1995 to facilitate enhanced cooperation be- tween European marine science organizations towards the development of a com- mon vision on the research priorities and strategies for marine science in Europe. Members are either major national marine or oceanographic institutes, research funding agencies, or national consortia of universities with a strong marine re- search focus. In 2012, the Marine Board represents 34 Member Organizations from 20 countries. The Board provides the essential components for transferring knowl- edge for leadership in marine research in Europe. Adopting a strategic role, the Ma- rine Board serves its member organizations by providing a forum within which ma- rine research policy advice to national agencies and to the European Commission is developed, with the objective of promoting the establishment of the European Marine Research Area. www.marineboard.eu Authors: C. Heip & N. McDonough Additional contribution from: K. Gjerde Infoboxes: J.B. Calewaert, K. Larkin and N. McDonough Additional editorial comments: F. Boero and J. Mees The content of this document has been subject to internal review, editorial support and approval by the Marine Board member organizations (shown on the back cover). External Review by: Kristina M. Gjerde Senior High Seas Advisor IUCN Global Marine and Polar Programme Paul Snelgrove Canada Research Chair in Boreal and Cold Ocean Systems Ocean Sciences Centre and Biology Department Memorial University of Newfoundland Suggested reference: Heip, C.