Tree Species Composition for Squirrel- Observation Recreational Activity in Botanical Garden, Putrajaya
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Checklist of the Mammals of Indonesia
CHECKLIST OF THE MAMMALS OF INDONESIA Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation i ii CHECKLIST OF THE MAMMALS OF INDONESIA Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation By Ibnu Maryanto Maharadatunkamsi Anang Setiawan Achmadi Sigit Wiantoro Eko Sulistyadi Masaaki Yoneda Agustinus Suyanto Jito Sugardjito RESEARCH CENTER FOR BIOLOGY INDONESIAN INSTITUTE OF SCIENCES (LIPI) iii © 2019 RESEARCH CENTER FOR BIOLOGY, INDONESIAN INSTITUTE OF SCIENCES (LIPI) Cataloging in Publication Data. CHECKLIST OF THE MAMMALS OF INDONESIA: Scientific, English, Indonesia Name and Distribution Area Table in Indonesia Including CITES, IUCN and Indonesian Category for Conservation/ Ibnu Maryanto, Maharadatunkamsi, Anang Setiawan Achmadi, Sigit Wiantoro, Eko Sulistyadi, Masaaki Yoneda, Agustinus Suyanto, & Jito Sugardjito. ix+ 66 pp; 21 x 29,7 cm ISBN: 978-979-579-108-9 1. Checklist of mammals 2. Indonesia Cover Desain : Eko Harsono Photo : I. Maryanto Third Edition : December 2019 Published by: RESEARCH CENTER FOR BIOLOGY, INDONESIAN INSTITUTE OF SCIENCES (LIPI). Jl Raya Jakarta-Bogor, Km 46, Cibinong, Bogor, Jawa Barat 16911 Telp: 021-87907604/87907636; Fax: 021-87907612 Email: [email protected] . iv PREFACE TO THIRD EDITION This book is a third edition of checklist of the Mammals of Indonesia. The new edition provides remarkable information in several ways compare to the first and second editions, the remarks column contain the abbreviation of the specific island distributions, synonym and specific location. Thus, in this edition we are also corrected the distribution of some species including some new additional species in accordance with the discovery of new species in Indonesia. -
The Impact of Locomotion on the Brain Evolution of Squirrels and Close Relatives ✉ Ornella C
ARTICLE https://doi.org/10.1038/s42003-021-01887-8 OPEN The impact of locomotion on the brain evolution of squirrels and close relatives ✉ Ornella C. Bertrand 1 , Hans P. Püschel 1, Julia A. Schwab 1, Mary T. Silcox 2 & Stephen L. Brusatte1 How do brain size and proportions relate to ecology and evolutionary history? Here, we use virtual endocasts from 38 extinct and extant rodent species spanning 50+ million years of evolution to assess the impact of locomotion, body mass, and phylogeny on the size of the brain, olfactory bulbs, petrosal lobules, and neocortex. We find that body mass and phylogeny are highly correlated with relative brain and brain component size, and that locomotion strongly influences brain, petrosal lobule, and neocortical sizes. Notably, species living in 1234567890():,; trees have greater relative overall brain, petrosal lobule, and neocortical sizes compared to other locomotor categories, especially fossorial taxa. Across millions of years of Eocene- Recent environmental change, arboreality played a major role in the early evolution of squirrels and closely related aplodontiids, promoting the expansion of the neocortex and petrosal lobules. Fossoriality in aplodontiids had an opposing effect by reducing the need for large brains. 1 School of GeoSciences, University of Edinburgh, Grant Institute, Edinburgh, Scotland, UK. 2 Department of Anthropology, University of Toronto Scarborough, ✉ Toronto, ON, Canada. email: [email protected] COMMUNICATIONS BIOLOGY | (2021) 4:460 | https://doi.org/10.1038/s42003-021-01887-8 | www.nature.com/commsbio 1 ARTICLE COMMUNICATIONS BIOLOGY | https://doi.org/10.1038/s42003-021-01887-8 hat ecological and evolutionary factors affect brain size striking differences between living sciurids and aplodontiids raise in mammals? Studies have assessed the impact of the question of how this modern rodent assemblage emerged. -
Trip Report 27Th September to 3Rd October 2014
Bali Trip Report 27th September to 3rd October 2014 Green Junglefowl by David Hoddinott RBT Bali 2014 Trip Report 2 Trip report compiled by Tour Leader: David Hoddinott Some of the top birds seen during this tour: 1. Sunda Thrush 7. Javan Kingfisher 2. Javan Banded Pitta 8. Oriental Plover 3. Javan Owlet 9. Sunda Scops Owl 4. Green Junglefowl 10. Cerulean Kingfisher 5. Bali Myna 11. Sunda Warbler 6. Yellow-throated Hanging Parrot 12. Crescent-chested Babbler Tour Summary Our comprehensive Bali tour was a resounding success! We recorded a fabulous 163 species including a good number of near-endemics and Bali’s only endemic (and one of the world’s rarest birds to boot), the magnificent Bali Myna! On our first afternoon we all met up at our comfortable ecolodge in the wooded outskirts of Denpasar. Some participants had just arrived in Bali from their international flights and the rest of us had recently flown in from Manado, after having completed a fabulous Sulawesi & Halmahera tour. Everyone had arrived in good time and after enjoying a delicious lunch we ventured out to the nearby Serangan Island to Oriental Plovers by David Hoddinott enjoy some bonus birding. The mudflats, mangroves and surrounding grassland here rewarded us with great sightings in the good, late afternoon light. Some of the highlights included a good number of Sunda Teal, Little Pied and Little Black Cormorants, Australian Pelican – a nice surprise, sneaky Ruddy-breasted Crake, a plethora of waders including splendid Beach Stone- curlew and Javan and the very sought-after Oriental Plover, smashing Little Tern in full breeding plumage, Island Collared Dove, Savanna Nightjar, Cave Swiftlet hawking insects over the ponds, and cracking Cerulean Kingfisher. -
Tree Species Composition and Configuration Based on Squirrel Behaviour Pattern in Selected Malaysian Urban Parks
TREE SPECIES COMPOSITION AND CONFIGURATION BASED ON SQUIRREL BEHAVIOUR PATTERN IN SELECTED MALAYSIAN URBAN PARKS NORAINI BAHARI A thesis submitted in fulfilment of the requirements for the award of the degree of Doctor of Philosophy Faculty of Built Environment and Surveying Universiti Teknologi Malaysia AUGUST 2019 DEDICATION This thesis is dedicated to: Mak and Abah Nur Adlina, Muhammad Imran, Muhammad Aiman and Nurin Syuhada iv ACKNOWLEDGEMENT In the Name of Allah, the Most Beneficent, the Most Merciful. Firstly, I would like to express my sincere gratitude to my supervisor Professor Dr. Ismail bin Said for the continuous support of my PhD study and related research, for his patience, motivation, and knowledge sharing. His guidance has helped me a lot in completing this research and writing of this thesis. To my first co- supervisor, I would like to thank Associate Professor Dr. Ismail Mohamad for his insightful comments and guidance in the statistical aspects in this PhD research. Not forgetting, my second co-supervisor Dr. Noradila Rusli @ Ruslik for her tireless guidance throughout the research in the GIS application. I am also grateful to Dr. Nurul Nadiah Sahimi and Dr. Nur Huzeima Mohd Hussain for their enlightenment and discussions we have together. Last but not least, my dearest sister Hayati for supporting me spiritually, emotionally and financially. Finally, I would like to express my profound gratitude to my B12 beloved postgraduate friends - Mega, Nurun, Amalina, Jo, Irfan, Ibu Arty, Adik Yeo and Janna for their continuous encouragement throughout my years of PhD study in UTM. v ABSTRACT In Malaysian urban parks, observing wildlife activity, particularly squirrels, is not a popular recreational activity among their users. -
Squirrels of Sulawesi: an Introduction
Squirrels of Sulawesi: An introduction by David Mead 2013 Sulang Language Data and Working Papers: Topics in Lexicography, no. 26 Sulawesi Language Alliance http://sulang.org/ SulangLexTopics026-v1 LANGUAGES Language of materials : English ABSTRACT This article has two parts. The first part comprises thumbnail sketches of the twelve squirrel species found on the island of Sulawesi. The second part is a description of some other small mammals which may potentially be confused with squirrels, at least during the initial phases of lexicography research. TABLE OF CONTENTS Part 1: Checklist of squirrel species; Giant squirrels; Beautiful squirrels; Dwarf squirrels; Long-nosed squirrels; Part 2: Some similar animals from around Indonesia; Tarsiers; Tree shrews; Flying squirrels; Colugos; Sugar gliders; Cuscuses; References. VERSION HISTORY Version 2 [31 July 2014] Checklist updated to accord with Musser et al. (2010) and to a greater or lesser extent all thumbnail descriptions revised. Version 1 [26 June 2013] Drafted October 2010, significantly revised June 2013. © 2010–2014 by David Mead Text is licensed under terms of the Creative Commons Attribution- NonCommercial-ShareAlike 3.0 Unported license. Images are licensed as individually noted in the text. Squirrels of Sulawesi: An introduction by David Mead This article has two parts. The first part comprises thumbnail sketches of the twelve squirrel species found on the island of Sulawesi, as they are currently recognized. The second part is a description of some other small mammals which may potentially be confused with squirrels, at least during the initial phases of lexicography research before the live animal is encountered. My source for squirrel species present on Sulawesi is Musser et al. -
Indonesia 24 September to 15 October 2013
Indonesia 24 September to 15 October 2013 Dave D Redfield Mammal Tour Picture: Sunda Flying Lemur (Colugo) with young by Richard White Report compiled by Richard White The story: 5 islands, 22 days and 52 mammals... A journey to a land where lizards fly, squirrels are the size of mice, civets look like otters and deer are no bigger than small annoying poodles...Indonesia! Where did this all begin...? In late June I was thinking of heading to Asia for a break. After yet another Tasmanian winter I wanted to sweat, get soaked in a tropical rain shower, get hammered by mosquitoes...I wanted to eat food with my hands (and not get stared at), wear sandals, drink cheap beer...and of course experience an amazing diversity of life. While researching some options I contacted my former employer and good friend Adam Riley from Rockjumper Birding Tours/Indri and he suggested I touch base with a client that I had arranged trips for before. The client (and now friend!) in question, Dave Redfield, has seen an aPD]LQJYDULHW\RIWKHZRUOG¶VPDPPDO species but, at that time, had yet to visit Indonesia. So, armed with a target list and a 22 day budget, I sat down and began researching and designing a tour in search of a select suit of mammal species for Dave. Time, terrain, concentration of species and cost were considered. We settled on a few days in mammal hotspots on Java, Sumatra, Borneo, Sulawesi and finally Bali, in that order. %DOLZDVDOVRFKRVHQDVDJRRGSODFHWRZLQGGRZQDIWHUµURXJKLQJLW¶ though the rest of Indonesia. It is also worth mentioning that Dave, realising that seeing all the ZRUOG¶Vmammals in the wild is an impossible target, does count mammals seen in captivity; the target list of species was thus not what one might have expected (for example, a Red Spiny Mouse was a priority but Babirusa was not). -
A Checklist of the Mammals of South-East Asia
A Checklist of the Mammals of South-east Asia A Checklist of the Mammals of South-east Asia PHOLIDOTA Pangolin (Manidae) 1 Sunda Pangolin (Manis javanica) 2 Chinese Pangolin (Manis pentadactyla) INSECTIVORA Gymnures (Erinaceidae) 3 Moonrat (Echinosorex gymnurus) 4 Short-tailed Gymnure (Hylomys suillus) 5 Chinese Gymnure (Hylomys sinensis) 6 Large-eared Gymnure (Hylomys megalotis) Moles (Talpidae) 7 Slender Shrew-mole (Uropsilus gracilis) 8 Kloss's Mole (Euroscaptor klossi) 9 Large Chinese Mole (Euroscaptor grandis) 10 Long-nosed Chinese Mole (Euroscaptor longirostris) 11 Small-toothed Mole (Euroscaptor parvidens) 12 Blyth's Mole (Parascaptor leucura) 13 Long-tailed Mole (Scaptonyx fuscicauda) Shrews (Soricidae) 14 Lesser Stripe-backed Shrew (Sorex bedfordiae) 15 Myanmar Short-tailed Shrew (Blarinella wardi) 16 Indochinese Short-tailed Shrew (Blarinella griselda) 17 Hodgson's Brown-toothed Shrew (Episoriculus caudatus) 18 Bailey's Brown-toothed Shrew (Episoriculus baileyi) 19 Long-taied Brown-toothed Shrew (Episoriculus macrurus) 20 Lowe's Brown-toothed Shrew (Chodsigoa parca) 21 Van Sung's Shrew (Chodsigoa caovansunga) 22 Mole Shrew (Anourosorex squamipes) 23 Himalayan Water Shrew (Chimarrogale himalayica) 24 Styan's Water Shrew (Chimarrogale styani) Page 1 of 17 Database: Gehan de Silva Wijeyeratne, www.jetwingeco.com A Checklist of the Mammals of South-east Asia 25 Malayan Water Shrew (Chimarrogale hantu) 26 Web-footed Water Shrew (Nectogale elegans) 27 House Shrew (Suncus murinus) 28 Pygmy White-toothed Shrew (Suncus etruscus) 29 South-east -
Body Size and Diet Mediate Evolution of Jaw Shape in Squirrels (Sciuridae)
Rare ecomorphological convergence on a complex adaptive landscape: body size and diet mediate evolution of jaw shape in squirrels (Sciuridae) *Miriam Leah Zelditch; Museum of Paleontology, University of Michigan, Ann Arbor, MI 48109; [email protected] Ji Ye; Earth and Environmental Sciences, University of Michigan, Ann Arbor, MI 48109; [email protected] Jonathan S. Mitchell; Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109; [email protected] Donald L. Swiderski, Kresge Hearing Research Institute and Museum of Zoology, University of Michigan. [email protected] *Corresponding Author Running head: Convergence on a complex adaptive landscape Key Words: Convergence, diet evolution, jaw morphology, shape evolution, macroevolutionary adaptive landscape, geometric morphometrics Data archival information: doi: 10.5061/dryad.kq1g6. This is the author manuscript accepted for publication and has undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record. Please cite this article as doi: 10.1111/evo.13168. This article is protected by copyright. All rights reserved. Abstract Convergence is widely regarded as compelling evidence for adaptation, often being portrayed as evidence that phenotypic outcomes are predictable from ecology, overriding contingencies of history. However, repeated outcomes may be very rare unless adaptive landscapes are simple, structured by strong ecological and functional constraints. One such constraint may be a limitation on body size because performance often scales with size, allowing species to adapt to challenging functions by modifying only size. When size is constrained, species might adapt by changing shape; convergent shapes may therefore be common when size is limiting and functions are challenging. -
Checklist of Mammals of Danum Valley
CHECKLIST OF MAMMALS OF DANUM VALLEY 1. Pangolins MANIDAE - Sunda Pangolin Manis Javanica 2. Mooonrats & allies ERINACIEDAE - Moonrat Echinosorex Gymnurus 3. Tree Shrews TUPAIIDAE - Common Treeshrew Tupaia glis - Lesser Treeshrew Tupaia minor - Striped Treeshrew Tupaia dorsalis - Large Treeshrew Tupaia tana - Painted Treeshrew Tupaia picta - Ruddy Treeshrew Tupaia splendida 4. Flying Lemurs CYNOCEPHALIDAE - Colugo Cynocephalus variegates 5. Fruit-bats PTEROPIDAE - Large Flying Fox Pteropus vampyrus - Island Flying Fox Pteropus hypomelanus 6. Lorises LORIDAE - Slow Loris Nycticebus coucang 7. Tarsiers TARSIIDAE - Western Tarsier Tarsius bancanus 8. Old World Monkeys CERCOPITHECIDAE - Long-tailed Macaque Macaca fascicularis - Pig-tailed Macaque Macaca nemestrina - Proboscis Monkey Nasalis larvatus - Red Leaf Monkey Presbytis rubicunda - Silvered Leaf Monkey Presbytis cristata 9. Gibbons HYLOBATIDAE - Borneon Gibbon Hylobates muelleri 10. Orangutan PONGIDAE - Borneon Orangutan Pongo pymaeus 11. Bears URSIDAE - Sun Bear Helarctos malayanus 12. Weasels MUSTELIDAE - Yellow-throated Marten Martes fulvigula - Malay Weasel Mustila nudipes - Ferret Badger Melogale orientalis - Malay Badger Mydaus javanensis - Hairy-nosed Otter Lutra sumatrana - Smooth Otter Lutrogale perspicillata - Common Otter Lutra lutra - Oriental Small-clawed Otter Aonycx cinerea 13. Civets VIVERRIDAE - Malay Civet Viverra tangalunga - Banded Linsang Prionodon lisang - Common Palm Civet Paradoxurus hermaphrodilus - Masked Palm Civet Paguma larvata - Binturong Arctitis binturong -
Nuclear DNA Phylogeny of the Squirrels (Mammalia: Rodentia) and the Evolution of Arboreality from C-Myc and RAG1
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 30 (2004) 703–719 www.elsevier.com/locate/ympev Nuclear DNA phylogeny of the squirrels (Mammalia: Rodentia) and the evolution of arboreality from c-myc and RAG1 Scott J. Steppan,a,* Brian L. Storz,a and Robert S. Hoffmannb a Department of Biological Science, Florida State University, Tallahassee, FL 32306-1100, USA b Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, MRC-108, Washington, DC 20560, USA Received 24 February 2003; revised 15 May 2003 Abstract Although the family Sciuridae is large and well known, phylogenetic analyses are scarce. We report on a comprehensive mo- lecular phylogeny for the family. Two nuclear genes (c-myc and RAG1) comprising approximately 4500 bp of data (most in exons) are applied for the first time to rodent phylogenetics. Parsimony, likelihood, and Bayesian analyses of the separate gene regions and combined data reveal five major lineages and refute the conventional elevation of the flying squirrels (Pteromyinae) to subfamily status. Instead, flying squirrels are derived from one of the tree squirrel lineages. C-myc indels corroborate the sequence-based topologies. The common ancestor of extant squirrels appears to have been arboreal, confirming the fossil evidence. The results also reveal an unexpected clade of mostly terrestrial squirrels with African and Holarctic centers of diversity. We present a revised classification of squirrels. Our results demonstrate the phylogenetic utility of relatively slowly evolving nuclear exonic data even for relatively recent clades. Ó 2003 Elsevier Science (USA). All rights reserved. 1. Introduction compromised by an incomplete understanding of their phylogenetic relationships. -
Flora and Fauna Study for the Proposed Logging and Oil Palm Plantation at Pt 11675 (854.31 Hectares)
FLORA AND FAUNA STUDY FOR THE PROPOSED LOGGING AND OIL PALM PLANTATION AT PT 11675 (854.31 HECTARES) IN MUKIM KERATONG DISTRICT OF ROMPIN, PAHANG DARUL MAKMUR SEPTEMBER 2019 Prepared by Assoc Prof Datuk Dr Azrae Bin Haji Idris Universiti Malaya, Kuala Lumpur Flora and Fauna Study for the Proposed Logging and Oil Palm Plantation at PT 11675 (854.31 Hectares) in Mukim Keratong District of Rompin, Pahang Darul Makmur EXISTING CONDITION Introduction – Juxtaposition The Proposed Project Site is an area of 854.31 ha (2111.0 acres) located within Mukim Keratong, Daerah Rompin, Pahang. It lies approximately from 2°38’5” N to 2040’0” N latitude to 103°3’15” E to 103°5’32” E longitude. The Felda Selancar complexes lie on its western sides with Felda Selancar 4 and 9 at its border (Fig J1). The Endau Rompin National Park is located about 20 - 25 km in the southeast direction. The area is accessible through Lebuhraya 12 Segamat - Kuantan and Lebuhraya Tun Razak from Segamat and into Road 2490 until it reaches the Selancar Felda complexes (Selancar 2, 4, 5 and 9 on the left and Selancar 3 on the right). From Selancar 9, take off road towards the Proposed Project Site, initially using earth track of Felda Selancar 9 palm oil plantation before joining the numerous tracks within the site (Fig J2a and J2b). Large tracts of open-up lands mainly for agriculture lie in the northern direction drained by the Jekatih River. Sungai Pukin flows in the southerly direction but did not reside within the Proposed Project Site. -
Search for Polyoma-, Herpes-, and Bornaviruses in Squirrels of the Family Sciuridae Vanessa Schulze1, Peter W
Schulze et al. Virology Journal (2020) 17:42 https://doi.org/10.1186/s12985-020-01310-4 RESEARCH Open Access Search for polyoma-, herpes-, and bornaviruses in squirrels of the family Sciuridae Vanessa Schulze1, Peter W. W. Lurz2, Nicola Ferrari3, Claudia Romeo3, Michael A. Steele4, Shealyn Marino4, Maria Vittoria Mazzamuto5, Sébastien Calvignac-Spencer6, Kore Schlottau7, Martin Beer7, Rainer G. Ulrich1,8* and Bernhard Ehlers9* Abstract Background: Squirrels (family Sciuridae) are globally distributed members of the order Rodentia with wildlife occurrence in indigenous and non-indigenous regions (as invasive species) and frequent presence in zoological gardens and other holdings. Multiple species introductions, strong inter-species competition as well as the recent discovery of a novel zoonotic bornavirus resulted in increased research interest on squirrel pathogens. Therefore we aimed to test a variety of squirrel species for representatives of three virus families. Methods: Several species of the squirrel subfamilies Sciurinae, Callosciurinae and Xerinae were tested for the presence of polyomaviruses (PyVs; family Polyomaviridae) and herpesviruses (HVs; family Herpesviridae), using generic nested polymerase chain reaction (PCR) with specificity for the PyV VP1 gene and the HV DNA polymerase (DPOL) gene, respectively. Selected animals were tested for the presence of bornaviruses (family Bornaviridae), using both a broad-range orthobornavirus- and a variegated squirrel bornavirus 1 (VSBV-1)-specific reverse transcription- quantitative PCR (RT-qPCR). Results: In addition to previously detected bornavirus RNA-positive squirrels no more animals tested positive in this study, but four novel PyVs, four novel betaherpesviruses (BHVs) and six novel gammaherpesviruses (GHVs) were identified. For three PyVs, complete genomes could be amplified with long-distance PCR (LD-PCR).