Tryptic Soy Agar/Trypticase™ Soy Agar (Soybean-Casein Digest Agar)
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Identification of Strains Isolated in Thailand and Assigned to the Genera Kozakia and Swaminathania
JOURNAL OF CULTURE COLLECTIONS Volume 6, 2008-2009, pp. 61-68 IDENTIFICATION OF STRAINS ISOLATED IN THAILAND AND ASSIGNED TO THE GENERA KOZAKIA AND SWAMINATHANIA Jintana Kommanee1, Somboon Tanasupawat1,*, Ancharida Akaracharanya2, Taweesak Malimas3, Pattaraporn Yukphan3, Yuki Muramatsu4, Yasuyoshi Nakagawa4 and Yuzo Yamada3,† 1Department of Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand; 2Department of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; 3BIOTEC Culture Collection, National Center for Genetic Engineering and Biotechnology, Pathumthani 12120, Thailand; 4Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation, Kisarazu 292-0818, Japan; †JICA Senior Overseas Volunteer, Japan International Cooperation Agency, Shibuya-ku, Tokyo 151-8558, Japan; Professor Emeritus, Shizuoka University, Suruga-ku, Shizuoka 422-8529, Japan *Corresponding author, e-mail: [email protected] Summary Four isolates, isolated from fruit of sapodilla collected at Chantaburi and designated as CT8-1 and CT8-2, and isolated from seeds of ixora („khem” in Thai, Ixora species) collected at Rayong and designated as SI15-1 and SI15-2, were examined taxonomically. The four isolates were selected from a total of 181 isolated acetic acid bacteria. Isolates CT8-1 and CT8-2 were non motile and produced a levan-like mucous polysaccharide from sucrose or D-fructose, but did not produce a water-soluble brown pigment from D-glucose on CaCO3-containing agar slants. The isolates produced acetic acid from ethanol and oxidized acetate and lactate to carbon dioxide and water, but the intensity of the acetate and lactate oxidation was weak. Their growth was not inhibited by 0.35 % acetic acid (v/v) at pH 3.5. -
Insight Into the Resistome and Quorum Sensing System of a Divergent Acinetobacter Pittii Isolate from 1 an Untouched Site Of
bioRxiv preprint doi: https://doi.org/10.1101/745182; this version posted November 27, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Insight into the resistome and quorum sensing system of a divergent Acinetobacter pittii isolate from 2 an untouched site of the Lechuguilla Cave 3 4 Han Ming Gan1,2,3*, Peter Wengert4 , Hazel A. Barton5, André O. Hudson4 and Michael A. Savka4 5 1 Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Geelong 6 3220 ,Victoria, Australia 7 2 Deakin Genomics Centre, Deakin University, Geelong 3220 ,Victoria, Australia 8 3 School of Science, Monash University Malaysia, Bandar Sunway, 47500 Petaling Jaya, Selangor, 9 Malaysia 10 4 Thomas H. Gosnell School of Life Sciences, Rochester Institute of Technology, Rochester, NY, USA 11 5 Department of Biology, University of Akron, Akron, Ohio, USA 12 *Corresponding author 13 Name: Han Ming Gan 14 Email: [email protected] 15 Key words 16 Acinetobacter, quorum sensing, antibiotic resistance 17 18 Abstract 19 Acinetobacter are Gram-negative bacteria belonging to the sub-phyla Gammaproteobacteria, commonly 20 associated with soils, animal feeds and water. Some members of the Acinetobacter have been 21 implicated in hospital-acquired infections, with broad-spectrum antibiotic resistance. Here we report the 22 whole genome sequence of LC510, an Acinetobacter species isolated from deep within a pristine 23 location of the Lechuguilla Cave. -
Microbiological Study of Fresh White Cheese - 129
Pesic-Mikulec.: Microbiological study of fresh white cheese - 129 - MICROBIOLOGICAL STUDY OF FRESH WHITE CHEESE (A SERBIAN CRAFT VARIETY) D PEŠIĆ-MIKULEC1 − L. JOVANOVIĆ2 e-mail: [email protected] 1 Veterinary Research Institute 11050 Belgrade, Borivoja Stevanovića 2., Serbia and Montenegro 2 BK University, Belgrade, Serbia and Montenegro (Received 7th March 2005, accepted 4th August 2005) Abstract. The levels of several microbial groups of aerobic mesophilic flora, aerobic psychrotrophic flora, lactic acid bacteria, Micrococcaceae, enterococci, Enterobacteriaceae, and molds and yeasts were investigated during the manufacture of fresh white cheese of a Serbian craft variety without the addition of starter culture. This variety of cheese is made in farmhouses from cow, sheep and goat's milk. White fresh cheese from mountain villages of Serbia has economical importance for this area. The study of the microbial characteristics of this cheese constitutes the first step towards the establishment of a starter culture which would allow the making of a product both more uniform and safer. The total microbial counts were high in these variety of cheeses. Almost all the microbial groups reached their maximum counts in curd. Lactic acid bacteria were the major microbial group, reaching count similar to the total aerobic mesophilic flora at all sampling points. Lactococcus lactis subsp. lactis dominated in milk (62,5%) of the isolates obtained in the Man Rogosa Sharpe (MRS) agar at these sampling points, while the Lactobacillus casei subs.casei was the most predominant species (83,5% of isolates obtained at these sampling points). The purpose of this study was to investigate the microflora of white cheeses with special emphasis on the autochthonous lactic acid bacteria involved in fermentation of this cheeses depending on the geographical location where the cheeses were manufactured. -
Microbiological and Metagenomic Characterization of a Retail Delicatessen Galotyri-Like Fresh Acid-Curd Cheese Product
fermentation Article Microbiological and Metagenomic Characterization of a Retail Delicatessen Galotyri-Like Fresh Acid-Curd Cheese Product John Samelis 1,* , Agapi I. Doulgeraki 2,* , Vasiliki Bikouli 2, Dimitrios Pappas 3 and Athanasia Kakouri 1 1 Dairy Research Department, Hellenic Agricultural Organization ‘DIMITRA’, Katsikas, 45221 Ioannina, Greece; [email protected] 2 Hellenic Agricultural Organization ‘DIMITRA’, Institute of Technology of Agricultural Products, 14123 Lycovrissi, Greece; [email protected] 3 Skarfi EPE—Pappas Bros Traditional Dairy, 48200 Filippiada, Greece; [email protected] * Correspondence: [email protected] (J.S.); [email protected] (A.I.D.); Tel.: +30-2651094789 (J.S.); +30-2102845940 (A.I.D.) Abstract: This study evaluated the microbial quality, safety, and ecology of a retail delicatessen Galotyri-like fresh acid-curd cheese traditionally produced by mixing fresh natural Greek yogurt with ‘Myzithrenio’, a naturally fermented and ripened whey cheese variety. Five retail cheese batches (mean pH 4.1) were analyzed for total and selective microbial counts, and 150 presumptive isolates of lactic acid bacteria (LAB) were characterized biochemically. Additionally, the most and the least diversified batches were subjected to a culture-independent 16S rRNA gene sequencing analysis. LAB prevailed in all cheeses followed by yeasts. Enterobacteria, pseudomonads, and staphylococci were present as <100 viable cells/g of cheese. The yogurt starters Streptococcus thermophilus and Lactobacillus delbrueckii were the most abundant LAB isolates, followed by nonstarter strains of Lactiplantibacillus, Lacticaseibacillus, Enterococcus faecium, E. faecalis, and Leuconostoc mesenteroides, Citation: Samelis, J.; Doulgeraki, A.I.; whose isolation frequency was batch-dependent. Lactococcus lactis isolates were sporadic, except Bikouli, V.; Pappas, D.; Kakouri, A. Microbiological and Metagenomic for one cheese batch. -
Food Microbiology
Food Microbiology Food Water Dairy Beverage Online Ordering Available Food, Water, Dairy, & Beverage Microbiology Table of Contents 1 Environmental Monitoring Contact Plates 3 Petri Plates 3 Culture Media for Air Sampling 4 Environmental Sampling Boot Swabs 6 Environmental Testing Swabs 8 Surface Sanitizers 8 Hand Sanitation 9 Sample Preparation - Dilution Vials 10 Compact Dry™ 12 HardyCHROM™ Chromogenic Culture Media 15 Prepared Media 24 Agar Plates for Membrane Filtration 26 CRITERION™ Dehydrated Culture Media 28 Pathogen Detection Environmental With Monitoring Contact Plates Baird Parker Agar Friction Lid For the selective isolation and enumeration of coagulase-positive staphylococci (Staphylococcus aureus) on environmental surfaces. HardyCHROM™ ECC 15x60mm contact plate, A chromogenic medium for the detection, 10/pk ................................................................................ 89407-364 differentiation, and enumeration of Escherichia coli and other coliforms from environmental surfaces (E. coli D/E Neutralizing Agar turns blue, coliforms turn red). For the enumeration of environmental organisms. 15x60mm plate contact plate, The media is able to neutralize most antiseptics 10/pk ................................................................................ 89407-354 and disinfectants that may inhibit the growth of environmental organisms. Malt Extract 15x60mm contact plate, Malt Extract is recommended for the cultivation and 10/pk ................................................................................89407-482 -
Prepared Culture Media
PREPARED CULTURE MEDIA 121517SS PREPARED CULTURE MEDIA Made in the USA AnaeroGRO™ DuoPak A 02 Bovine Blood Agar, 5%, with Esculin 13 AnaeroGRO™ DuoPak B 02 Bovine Blood Agar, 5%, with Esculin/ AnaeroGRO™ BBE Agar 03 MacConkey Biplate 13 AnaeroGRO™ BBE/PEA 03 Bovine Selective Strep Agar 13 AnaeroGRO™ Brucella Agar 03 Brucella Agar with 5% Sheep Blood, Hemin, AnaeroGRO™ Campylobacter and Vitamin K 13 Selective Agar 03 Brucella Broth with 15% Glycerol 13 AnaeroGRO™ CCFA 03 Brucella with H and K/LKV Biplate 14 AnaeroGRO™ Egg Yolk Agar, Modified 03 Buffered Peptone Water 14 AnaeroGRO™ LKV Agar 03 Buffered Peptone Water with 1% AnaeroGRO™ PEA 03 Tween® 20 14 AnaeroGRO™ MultiPak A 04 Buffered NaCl Peptone EP, USP 14 AnaeroGRO™ MultiPak B 04 Butterfield’s Phosphate Buffer 14 AnaeroGRO™ Chopped Meat Broth 05 Campy Cefex Agar, Modified 14 AnaeroGRO™ Chopped Meat Campy CVA Agar 14 Carbohydrate Broth 05 Campy FDA Agar 14 AnaeroGRO™ Chopped Meat Campy, Blood Free, Karmali Agar 14 Glucose Broth 05 Cetrimide Select Agar, USP 14 AnaeroGRO™ Thioglycollate with Hemin and CET/MAC/VJ Triplate 14 Vitamin K (H and K), without Indicator 05 CGB Agar for Cryptococcus 14 Anaerobic PEA 08 Chocolate Agar 15 Baird-Parker Agar 08 Chocolate/Martin Lewis with Barney Miller Medium 08 Lincomycin Biplate 15 BBE Agar 08 CompactDry™ SL 16 BBE Agar/PEA Agar 08 CompactDry™ LS 16 BBE/LKV Biplate 09 CompactDry™ TC 17 BCSA 09 CompactDry™ EC 17 BCYE Agar 09 CompactDry™ YMR 17 BCYE Selective Agar with CAV 09 CompactDry™ ETB 17 BCYE Selective Agar with CCVC 09 CompactDry™ YM 17 BCYE -
22092 Tryptic Soy Broth (TSB, (Tryptone Soya Broth, CASO Broth, Soybean Casein Digest Broth, Casein Soya Broth)
22092 Tryptic Soy Broth (TSB, (Tryptone Soya Broth, CASO Broth, Soybean Casein digest Broth, Casein Soya Broth) The medium will support a luxuriant growth of many fastidious organisms without the addition of serum. Used for confirmation of Campylobacter jejuni by means of the motility test. Composition: Ingredients Grams/Litre Casein peptone (pancreatic) 17.0 Soya peptone (papain digest.) 3.0 Sodium chloride 5.0 Dipotassium hydrogen phosphate 2.5 Glucose 2.5 Final pH 7.3 +/- 0.2 at 25°C Store prepared media below 8°C, protected from direct light. Store dehydrated powder, in a dry place, in tightly-sealed containers at 2-25°C. Directions : Suspend 30 g of dehydrated media in 1 litre of purified filtered water. Sterilize at 121°C for 15 minutes. Cool to 45- 50°C. Mix gently and dispense into sterile Petri dishes or sterile culture tubes. Principle and Interpretation: Casein peptone and Soya peptone provide nitrogen, vitamins and minerals. The natural sugars from Soya peptone and Glucose promote organism growth. Sodium chloride is for the osmotic balance, while Dipotassium hydrogen phosphate is a buffering agent. Tryptone Soya Broth is often for the tube dilution method of antibiotic susceptibility testing. The addition of a small amount of agar ( approx. 0.05-0.2% 05040, add before sterilisation) renders the broth suitable for the cultivation of obligatory anaerobes, such as Clostridium species. The superior growth-promoting properties of Tryptic Soy Broth make it especially useful for the isolation of organisms from blood or other body fluids. Anticoagulants such as sodium polyanetholesulfonate (81305) or sodium citrate (71635) may be added to the broth prior to sterilisation. -
A Comparative Study of Culture Methods and Polymerase Chain Reaction for Salmonella Detection in Egg Content
A comparative study of culture methods and polymerase chain reaction for Salmonella detection in egg content M. A. Soria ,* M. C. Soria ,*† and D. J. Bueno *1 * Instituto Nacional de Tecnología Agropecuaria (INTA), Estación Experimental Agropecuaria Concepción del Uruguay, Casilla de Correo No. 6, 3260, Entre Ríos, Argentina; and † Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Argentina Downloaded from https://academic.oup.com/ps/article-abstract/91/10/2668/1561306 by guest on 06 December 2019 ABSTRACT The present work compared 2 culture tion rates. All selective plating media did not show any methods and a PCR assay applied with 2 enrichment statistical differences in the parameters of performance methods for the detection of motile and nonmotile Sal- studied. Kappa coefficients showed that there was an monella strains using artificially contaminated egg con- excellent agreement between the bacteriological meth- tent. The specificity (Sp) was 1 in all methods. The ods for all Salmonella strains. The agreement was very sensitivity (Se), accuracy (Ac), positive predictive value good and good between the PCR methods, for motile (PPV), and negative predictive value (NPV) were 1 in and nonmotile strains, respectively. However, there both culture methods for motile and nonmotile strains. was a poor agreement when the PCR and bacteriologi- In reference to the PCR methods, Se and PPV were cal methods were compared for motile and nonmotile between 0 and 1, whereas Ac and NPV were between Salmonella strains. The TT and MKTTn methods are 0.14 and 1. The detection level of motile and nonmo- similar in terms of Ac, Se, Sp, PPV, and NPV for dif- tile strains was 5 to 54 cfu per 25 mL for both culture ferent Salmonella strains in egg content. -
Characterization of Cucumber Fermentation Spoilage Bacteria by Enrichment Culture and 16S Rdna Cloning
Characterization of Cucumber Fermentation Spoilage Bacteria by Enrichment Culture and 16S rDNA Cloning Fred Breidt, Eduardo Medina, Doria Wafa, Ilenys P´erez-D´ıaz, Wendy Franco, Hsin-Yu Huang, Suzanne D. Johanningsmeier, and Jae Ho Kim Abstract: Commercial cucumber fermentations are typically carried out in 40000 L fermentation tanks. A secondary fermentation can occur after sugars are consumed that results in the formation of acetic, propionic, and butyric acids, concomitantly with the loss of lactic acid and an increase in pH. Spoilage fermentations can result in significant economic loss for industrial producers. The microbiota that result in spoilage remain incompletely defined. Previous studies have implicated yeasts, lactic acid bacteria, enterobacteriaceae, and Clostridia as having a role in spoilage fermentations. We report that Propionibacterium and Pectinatus isolates from cucumber fermentation spoilage converted lactic acid to propionic acid, increasing pH. The analysis of 16S rDNA cloning libraries confirmed and expanded the knowledge gained from previous studies using classical microbiological methods. Our data show that Gram-negative anaerobic bacteria supersede Gram-positive Fermincutes species after the pH rises from around 3.2 to pH 5, and propionic and butyric acids are produced. Characterization of the spoilage microbiota is an important first step in efforts to prevent cucumber fermentation spoilage. Keywords: pickled vegetables, Pectinatus, Propionibacteria, secondary cucumber fermentation, spoilage M: Food Microbiology Practical Application: An understanding of the microorganisms that cause commercial cucumber fermentation spoilage & Safety may aid in developing methods to prevent the spoilage from occurring. Introduction cucumbers fermented at 2.3% NaCl (Fleming and others 1989). Commercial cucumber fermentations are typically carried out In this fermentation tank, the initial lactic acid fermentation was in large 40000 L outdoor tanks (reviewed by Breidt and others completed within 2 wk, with 1.2% lactic acid formed (pH 3.6) 2007). -
TRYPTIC SOY BROTH W/ 15% GLYCEROL
TRYPTIC SOY BROTH w/ 15% GLYCEROL INTENDED USE Remel Tryptic Soy Broth w/ 15% Glycerol is a liquid medium recommended for use in long-term storage of bacteria. SUMMARY AND EXPLANATION This medium is recommended in Clinical Microbiology Procedures Handbook and by Clinical and Laboratory Standards Institute for the maintenance of stock cultures.1,2 When inoculated into Tryptic Soy Broth w/ 15% Glycerol and frozen at or below -40°C, suspensions of bacteria remain viable for several months. PRINCIPLE Casein and soy peptones provide amino acids and nitrogenous compounds for the growth of bacteria. Sodium chloride is a source of essential electrolytes and maintains osmotic equilibrium. Dipotassium phosphate is a pH buffer. Dextrose is a carbon energy source. Glycerol is a cryoprotective agent that provides intracellular and extracellular protection against freezing and promotes long-term preservation. REAGENTS (CLASSICAL FORMULA)* Casein Peptone........................................................... 17.0 g Dipotassium Phosphate ................................................2.5 g Sodium Chloride............................................................ 5.0 g Dextrose ........................................................................2.5 g Soy Peptone.................................................................. 3.0 g Glycerol .....................................................................150.0 ml Demineralized Water.................................................850.0 ml pH 7.3 ± 0.2 @ 25°C *Adjusted as required to meet performance standards. PROCEDURE 1. Inoculate the medium with a pure culture using a sterile inoculating loop or swab. 2. Place the tube with cap tightened at or below -40°C. 3. Organisms that have been inoculated and frozen in this medium should be thawed and checked for viability at appropriate intervals, following established laboratory guidelines. QUALITY CONTROL All lot numbers of Tryptic Soy Broth w/ 15% Glycerol have been tested using the following quality control organisms and have been found to be acceptable. -
Tryptic Soy Agar • Trypticase™ Soy Agar (Soybean-Casein Digest Agar)
Tryptic Soy Agar • Trypticase™ Soy Agar (Soybean-Casein Digest Agar) Intended Use plate counting, isolation of microorganisms from a variety Tryptic (Trypticase) Soy Agar (TSA) is used for the isolation and of specimen types and as a base for media containing blood.4-7 cultivation of nonfastidious and fastidious microorganisms. It It is also recommended for use in industrial applications when is not the medium of choice for anaerobes. testing water and wastewater,8 food,9-14 dairy products,15 and cosmetics.10,16 The 150 × 15 mm-style plates of Trypticase Soy Agar are convenient for use with Taxo™ factor strips in the isolation and Since TSA does not contain the X and V growth factors, it can differentiation of Haemophilus species. conveniently be used in determining the requirements for these growth factors by isolates of Haemophilus by the addition of X, Sterile Pack and Isolator Pack plates are useful for monitoring V and XV Factor Strips to inoculated TSA plates.5 The 150 mm surfaces and air in clean rooms, Isolator Systems and other plate provides a larger surface area for inoculation, making the environmentally-controlled areas when sterility of the medium “satellite” growth around the strips easier to read. is of importance. With the Sterile Pack and Isolator Pack plates, the entire double- Hycheck™ hygiene contact slides are used for assessing the wrapped (Sterile Pack) or triple-wrapped (Isolator Pack) product microbiological contamination of surfaces and fluids. is subjected to a sterilizing dose of gamma radiation, so that the Tryptic (Trypticase) Soy Agar meets United States Pharmacopeia contents inside the outer package(s) are sterile.17 This allows the (USP), European Pharmacopoeia (EP) and Japanese Pharmaco- inner package to be aseptically removed without introducing poeia (JP)1-3 performance specifications, where applicable. -
Inactivation of Staphylococcus Aureus and Salmonella Enteritidis in Tryptic Soy Broth and Caviar Samples by High Pressure Processing
Brazilian Journal of Medical and Biological Research (2005) 38: 1259-1265 High pressure effects on pathogens in caviar 1259 ISSN 0100-879X Inactivation of Staphylococcus aureus and Salmonella enteritidis in tryptic soy broth and caviar samples by high pressure processing F. Fioretto1-3, C. Cruz1, 1ERAP, IUT Périgueux, Bordeaux IV, Périgueux, France A. Largeteau2, T.A. Sarli3, 2Groupe Hautes Pressions, Institut de Chimie de la Matière Condensée de Bordeaux G. Demazeau2 and et Ecole Nationale Supérieure de Chimie et de Physique de Bordeaux, Pessac, France A. El Moueffak1 3Department of Inspection of Foods from Animal Origin, University “Federico II” of Naples, Naples, Italy Abstract Correspondence We studied the action of high pressure processing on the inactivation Key words F. Fioretto of two foodborne pathogens, Staphylococcus aureus ATCC 6538 and • High pressure processing ERAP, IUT Périgueux Salmonella enteritidis ATCC 13076, suspended in a culture medium • Staphylococcus aureus Bordeaux IV, and inoculated into caviar samples. The baroresistance of the two • Salmonella enteritidis Rue Paul Mazy, 39 pathogens in a tryptic soy broth suspension at a concentration of 108- • Tryptic soy broth 24019 Périgueux Cedex • 109 colony-forming units/ml was tested for continuous and cycled Caviar France • Pressure cycles Fax: +33-5-5306-3143 pressurization in the 150- to 550-MPa range and for 15-min treatments E-mail: [email protected] at room temperature. The increase of cycle number permitted the reduction of the pressure level able to totally inactivate both microor- Presented at the 3rd International ganisms in the tryptic soy broth suspension, whereas the effect of Conference on High Pressure different procedure times on complete inactivation of the microorgan- Bioscience and Biotechnology, isms inoculated into caviar was similar.