Acanthamoeba Spp., Balamuthia Mandrillaris, Naegleria Fowleri, And
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Protistology Mitochondrial Genomes of Amoebozoa
Protistology 13 (4), 179–191 (2019) Protistology Mitochondrial genomes of Amoebozoa Natalya Bondarenko1, Alexey Smirnov1, Elena Nassonova1,2, Anna Glotova1,2 and Anna Maria Fiore-Donno3 1 Department of Invertebrate Zoology, Faculty of Biology, Saint Petersburg State University, 199034 Saint Petersburg, Russia 2 Laboratory of Cytology of Unicellular Organisms, Institute of Cytology RAS, 194064 Saint Petersburg, Russia 3 University of Cologne, Institute of Zoology, Terrestrial Ecology, 50674 Cologne, Germany | Submitted November 28, 2019 | Accepted December 10, 2019 | Summary In this mini-review, we summarize the current knowledge on mitochondrial genomes of Amoebozoa. Amoebozoa is a major, early-diverging lineage of eukaryotes, containing at least 2,400 species. At present, 32 mitochondrial genomes belonging to 18 amoebozoan species are publicly available. A dearth of information is particularly obvious for two major amoebozoan clades, Variosea and Tubulinea, with just one mitochondrial genome sequenced for each. The main focus of this review is to summarize features such as mitochondrial gene content, mitochondrial genome size variation, and presence or absence of RNA editing, showing if they are unique or shared among amoebozoan lineages. In addition, we underline the potential of mitochondrial genomes for multigene phylogenetic reconstruction in Amoebozoa, where the relationships among lineages are not fully resolved yet. With the increasing application of next-generation sequencing techniques and reliable protocols, we advocate mitochondrial -
The Intestinal Protozoa
The Intestinal Protozoa A. Introduction 1. The Phylum Protozoa is classified into four major subdivisions according to the methods of locomotion and reproduction. a. The amoebae (Superclass Sarcodina, Class Rhizopodea move by means of pseudopodia and reproduce exclusively by asexual binary division. b. The flagellates (Superclass Mastigophora, Class Zoomasitgophorea) typically move by long, whiplike flagella and reproduce by binary fission. c. The ciliates (Subphylum Ciliophora, Class Ciliata) are propelled by rows of cilia that beat with a synchronized wavelike motion. d. The sporozoans (Subphylum Sporozoa) lack specialized organelles of motility but have a unique type of life cycle, alternating between sexual and asexual reproductive cycles (alternation of generations). e. Number of species - there are about 45,000 protozoan species; around 8000 are parasitic, and around 25 species are important to humans. 2. Diagnosis - must learn to differentiate between the harmless and the medically important. This is most often based upon the morphology of respective organisms. 3. Transmission - mostly person-to-person, via fecal-oral route; fecally contaminated food or water important (organisms remain viable for around 30 days in cool moist environment with few bacteria; other means of transmission include sexual, insects, animals (zoonoses). B. Structures 1. trophozoite - the motile vegetative stage; multiplies via binary fission; colonizes host. 2. cyst - the inactive, non-motile, infective stage; survives the environment due to the presence of a cyst wall. 3. nuclear structure - important in the identification of organisms and species differentiation. 4. diagnostic features a. size - helpful in identifying organisms; must have calibrated objectives on the microscope in order to measure accurately. -
A Revised Classification of Naked Lobose Amoebae (Amoebozoa
Protist, Vol. 162, 545–570, October 2011 http://www.elsevier.de/protis Published online date 28 July 2011 PROTIST NEWS A Revised Classification of Naked Lobose Amoebae (Amoebozoa: Lobosa) Introduction together constitute the amoebozoan subphy- lum Lobosa, which never have cilia or flagella, Molecular evidence and an associated reevaluation whereas Variosea (as here revised) together with of morphology have recently considerably revised Mycetozoa and Archamoebea are now grouped our views on relationships among the higher-level as the subphylum Conosa, whose constituent groups of amoebae. First of all, establishing the lineages either have cilia or flagella or have lost phylum Amoebozoa grouped all lobose amoe- them secondarily (Cavalier-Smith 1998, 2009). boid protists, whether naked or testate, aerobic Figure 1 is a schematic tree showing amoebozoan or anaerobic, with the Mycetozoa and Archamoe- relationships deduced from both morphology and bea (Cavalier-Smith 1998), and separated them DNA sequences. from both the heterolobosean amoebae (Page and The first attempt to construct a congruent molec- Blanton 1985), now belonging in the phylum Per- ular and morphological system of Amoebozoa by colozoa - Cavalier-Smith and Nikolaev (2008), and Cavalier-Smith et al. (2004) was limited by the the filose amoebae that belong in other phyla lack of molecular data for many amoeboid taxa, (notably Cercozoa: Bass et al. 2009a; Howe et al. which were therefore classified solely on morpho- 2011). logical evidence. Smirnov et al. (2005) suggested The phylum Amoebozoa consists of naked and another system for naked lobose amoebae only; testate lobose amoebae (e.g. Amoeba, Vannella, this left taxa with no molecular data incertae sedis, Hartmannella, Acanthamoeba, Arcella, Difflugia), which limited its utility. -
Molecular Detection of Human Parasitic Pathogens
MOLECULAR DETECTION OF HUMAN PARASITIC PATHOGENS MOLECULAR DETECTION OF HUMAN PARASITIC PATHOGENS EDITED BY DONGYOU LIU Boca Raton London New York CRC Press is an imprint of the Taylor & Francis Group, an informa business CRC Press Taylor & Francis Group 6000 Broken Sound Parkway NW, Suite 300 Boca Raton, FL 33487-2742 © 2013 by Taylor & Francis Group, LLC CRC Press is an imprint of Taylor & Francis Group, an Informa business No claim to original U.S. Government works Version Date: 20120608 International Standard Book Number-13: 978-1-4398-1243-3 (eBook - PDF) This book contains information obtained from authentic and highly regarded sources. Reasonable efforts have been made to publish reliable data and information, but the author and publisher cannot assume responsibility for the validity of all materials or the consequences of their use. The authors and publishers have attempted to trace the copyright holders of all material reproduced in this publication and apologize to copyright holders if permission to publish in this form has not been obtained. If any copyright material has not been acknowledged please write and let us know so we may rectify in any future reprint. Except as permitted under U.S. Copyright Law, no part of this book may be reprinted, reproduced, transmitted, or utilized in any form by any electronic, mechanical, or other means, now known or hereafter invented, including photocopying, microfilming, and recording, or in any information storage or retrieval system, without written permission from the publishers. For permission to photocopy or use material electronically from this work, please access www.copyright.com (http://www.copyright.com/) or contact the Copyright Clearance Center, Inc. -
The Epidemiology and Clinical Features of Balamuthia Mandrillaris Disease in the United States, 1974 – 2016
HHS Public Access Author manuscript Author ManuscriptAuthor Manuscript Author Clin Infect Manuscript Author Dis. Author manuscript; Manuscript Author available in PMC 2020 August 28. Published in final edited form as: Clin Infect Dis. 2019 May 17; 68(11): 1815–1822. doi:10.1093/cid/ciy813. The Epidemiology and Clinical Features of Balamuthia mandrillaris Disease in the United States, 1974 – 2016 Jennifer R. Cope1, Janet Landa1,2, Hannah Nethercut1,3, Sarah A. Collier1, Carol Glaser4, Melanie Moser5, Raghuveer Puttagunta1, Jonathan S. Yoder1, Ibne K. Ali1, Sharon L. Roy6 1Waterborne Disease Prevention Branch, Division of Foodborne, Waterborne, and Environmental Diseases, National Center for Emerging and Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA, USA 2James A. Ferguson Emerging Infectious Diseases Fellowship Program, Baltimore, MD, USA 3Oak Ridge Institute for Science and Education, Oak Ridge, TN, USA 4Kaiser Permanente, San Francisco, CA, USA 5Office of Financial Resources, Centers for Disease Control and Prevention Atlanta, GA, USA 6Parasitic Diseases Branch, Division of Parasitic Diseases and Malaria, Center for Global Health, Centers for Disease Control and Prevention, Atlanta, GA, USA Abstract Background—Balamuthia mandrillaris is a free-living ameba that causes rare, nearly always fatal disease in humans and animals worldwide. B. mandrillaris has been isolated from soil, dust, and water. Initial entry of Balamuthia into the body is likely via the skin or lungs. To date, only individual case reports and small case series have been published. Methods—The Centers for Disease Control and Prevention (CDC) maintains a free-living ameba (FLA) registry and laboratory. To be entered into the registry, a Balamuthia case must be laboratory-confirmed. -
Diagnosis of Infections Caused by Pathogenic Free-Living Amoebae
Virginia Commonwealth University VCU Scholars Compass Microbiology and Immunology Publications Dept. of Microbiology and Immunology 2009 Diagnosis of Infections Caused by Pathogenic Free- Living Amoebae Bruno da Rocha-Azevedo Virginia Commonwealth University Herbert B. Tanowitz Albert Einstein College of Medicine Francine Marciano-Cabral Virginia Commonwealth University Follow this and additional works at: http://scholarscompass.vcu.edu/micr_pubs Part of the Medicine and Health Sciences Commons Copyright © 2009 Bruno da Rocha-Azevedo et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Downloaded from http://scholarscompass.vcu.edu/micr_pubs/9 This Article is brought to you for free and open access by the Dept. of Microbiology and Immunology at VCU Scholars Compass. It has been accepted for inclusion in Microbiology and Immunology Publications by an authorized administrator of VCU Scholars Compass. For more information, please contact [email protected]. Hindawi Publishing Corporation Interdisciplinary Perspectives on Infectious Diseases Volume 2009, Article ID 251406, 14 pages doi:10.1155/2009/251406 Review Article Diagnosis of Infections Caused by Pathogenic Free-Living Amoebae Bruno da Rocha-Azevedo,1 Herbert B. Tanowitz,2 and Francine Marciano-Cabral1 1 Department of Microbiology and Immunology, Virginia Commonwealth University School of Medicine, Richmond, VA 23298, USA 2 Department of Pathology, Albert Einstein College of Medicine, Bronx, NY 10461, USA Correspondence should be addressed to Francine Marciano-Cabral, [email protected] Received 25 March 2009; Accepted 5 June 2009 Recommended by Louis M. Weiss Naegleria fowleri, Acanthamoeba spp., Balamuthia mandrillaris,andSappinia sp. -
Bacterial Brain Abscess in a Patient with Granulomatous Amebic Encephalitis
SVOA Neurology ISSN: 2753-9180 Case Report Bacterial Brain Abscess in a Patient with Granulomatous Amebic Encephalitis. A Misdiagnosis or Free-Living Amoeba Acting as Trojan Horse? Rolando Lovaton1* and Wesley Alaba1 1 Hospital Nacional Cayetano Heredia (Lima-Peru) *Corresponding Author: Dr. Rolando Lovaton, Neurosurgery Service-Hospital Nacional Cayetano Heredia, Avenida Honorio Delgado 262 San Martin de Porres, Lima-Peru Received: July 13, 2021 Published: July 24, 2021 Abstract Amebic encephalitis is a rare and devastating disease. Mortality rate is almost 90% of cases. Here is described a very rare case of bacterial brain abscess in a patient with recent diagnosis of granulomatous amebic encephalitis. Case De- scription: A 29-year-old woman presented with headache, right hemiparesis and tonic-clonic seizure. Patient was diag- nosed with granulomatous amebic encephalitis due to Acanthamoeba spp.; although, there was no improvement of symptoms in spite of stablished treatment. Three months after initial diagnosis, a brain MRI showed a ring-enhancing lesion in the left frontal lobe compatible with brain abscess. Patient was scheduled for surgical evacuation and brain abscess was confirmed intraoperatively. However, Gram staining of the purulent content showed gram-positive cocci. Patient improved headache and focal deficit after surgery. Conclusion: It is the first reported case of a patient with cen- tral nervous system infection secondary to Acanthamoeba spp. who presented a bacterial brain abscess in a short time. Keywords: amebic encephalitis; Acanthamoeba spp; bacterial brain abscess Introduction Free–living amoebae cause potentially fatal infection of central nervous system. Two clinical entities have been de- scribed for amebic encephalitis: primary amebic meningoencephalitis (PAM), and granulomatous amebic encephalitis (GAE). -
Acanthamoeba Castellanii
Int. J. Biol. Sci. 2018, Vol. 14 306 Ivyspring International Publisher International Journal of Biological Sciences 2018; 14(3): 306-320. doi: 10.7150/ijbs.23869 Research Paper Environmental adaptation of Acanthamoeba castellanii and Entamoeba histolytica at genome level as seen by comparative genomic analysis Victoria Shabardina1, Tabea Kischka1, Hanna Kmita2, Yutaka Suzuki3, Wojciech Maka owski1 1. Institute of Bioinformatics, University Münster, Niels-Stensen Strasse 14, Münster 48149, Germany ł 2. Laboratory of Bioenergetics, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University 3. Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8562, Japan Corresponding author: [email protected] © Ivyspring International Publisher. This is an open access article distributed under the terms of the Creative Commons Attribution (CC BY-NC) license (https://creativecommons.org/licenses/by-nc/4.0/). See http://ivyspring.com/terms for full terms and conditions. Received: 2017.11.15; Accepted: 2017.12.30; Published: 2018.02.12 Abstract Amoebozoans are in many aspects interesting research objects, as they combine features of single-cell organisms with complex signaling and defense systems, comparable to multicellular organisms. Acanthamoeba castellanii is a cosmopolitan species and developed diverged feeding abilities and strong anti-bacterial resistance; Entamoeba histolytica is a parasitic amoeba, who underwent massive gene loss and its genome is almost twice smaller than that of A. castellanii. Nevertheless, both species prosper, demonstrating fitness to their specific environments. Here we compare transcriptomes of A. castellanii and E. histolytica with application of orthologs’ search and gene ontology to learn how different life strategies influence genome evolution and restructuring of physiology. -
Interactions of Foodborne Pathogens with Freeliving Protozoa
Interactions of Foodborne Pathogens with Free-living Protozoa: Potential Consequences for Food Safety Mario J.M. Vaerewijck, Julie Bar´e, Ellen Lambrecht, Koen Sabbe, and Kurt Houf Abstract: Free-living protozoa (FLP) are ubiquitous in natural ecosystems where they play an important role in the reduction of bacterial biomass and the regeneration of nutrients. However, it has been shown that some species such as Acanthamoeba castellanii, Acanthamoeba polyphaga,andTetrahymena pyriformis can act as hosts of pathogenic bacteria. There is a growing concern that FLP might contribute to the maintenance of bacterial pathogens in the environment. In addition to survival and/or replication of bacterial pathogens in FLP, resistance to antimicrobial agents and increased virulence of bacteria after passage through protozoa have been reported. This review presents an overview of FLP in food-associated environments and on foods, and discusses bacterial interactions with FLP, with focus on the foodborne pathogens Campylobacter jejuni, Salmonella spp., Escherichia coli O157:H7, and Listeria monocytogenes. The consequences of these microbial interactions to food safety are evaluated. Keywords: Acanthamoeba, bacteria–FLP interactions, food safety, foodborne pathogens, free-living protozoa (FLP), Tetrahymena Introduction 1978) and Legionella pneumophila (Rowbotham 1980) in amebae. Food safety is a major subject of public concern. Food com- In the meantime, intraprotozoan survival and replication is well panies have to implement food safety systems such as GMP and documented for L. pneumophila, the causal agent of Legionnaires’ HACCP to meet the legal requirement for safe food and to gain disease (a severe pneumonia which can be lethal) and Pontiac consumer confidence. Such systems are based on the control by re- fever (a milder respiratory illness without pneumonia). -
This Thesis Has Been Submitted in Fulfilment of the Requirements for a Postgraduate Degree (E.G
This thesis has been submitted in fulfilment of the requirements for a postgraduate degree (e.g. PhD, MPhil, DClinPsychol) at the University of Edinburgh. Please note the following terms and conditions of use: This work is protected by copyright and other intellectual property rights, which are retained by the thesis author, unless otherwise stated. A copy can be downloaded for personal non-commercial research or study, without prior permission or charge. This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the author. The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the author. When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given. Protein secretion and encystation in Acanthamoeba Alvaro de Obeso Fernández del Valle Doctor of Philosophy The University of Edinburgh 2018 Abstract Free-living amoebae (FLA) are protists of ubiquitous distribution characterised by their changing morphology and their crawling movements. They have no common phylogenetic origin but can be found in most protist evolutionary branches. Acanthamoeba is a common FLA that can be found worldwide and is capable of infecting humans. The main disease is a life altering infection of the cornea named Acanthamoeba keratitis. Additionally, Acanthamoeba has a close relationship to bacteria. Acanthamoeba feeds on bacteria. At the same time, some bacteria have adapted to survive inside Acanthamoeba and use it as transport or protection to increase survival. When conditions are adverse, Acanthamoeba is capable of differentiating into a protective cyst. -
A Review of Balamuthiasis
Int. J. Adv. Res. Biol. Sci. (2020). 7(8): 15-24 International Journal of Advanced Research in Biological Sciences ISSN: 2348-8069 www.ijarbs.com DOI: 10.22192/ijarbs Coden: IJARQG (USA) Volume 7, Issue 8 -2020 Review Article DOI: http://dx.doi.org/10.22192/ijarbs.2020.07.08.003 A Review of Balamuthiasis Pam Martin Zang Department of Animal Health, Federal College of Animal health and Production Technology (NVRI)Vom, Plateau state Nigeria Abstract Balamuthia mandrillaris was first discovered in 1986 from brain necropsy of a pregnant mandrill baboon (Papio sphinx) that died of a neurological disease at the San Diego Zoo Wild Animal Park, California, USA. Because of the rarity of Balamuthiasis, risk factors for the disease are not well defined. Though soil, stagnant water may serve as sources of infection for balamuthiasis. Right now, the predisposing factors for B. mandrillaris encephalitis remain incompletely understood. Though, BAE may occur in healthy individuals, immunocompromised or weakened patients due to HIV infection, malnutrition, diabetes, those on immunosuppressive therapy, patients with malignancies, and alcoholism are predominantly at risk. While the number of infections due to B. mandrillaris is fairly low, the difficulty in diagnosis, lack of awareness, problematic treatment of GAE or BAE, and the resulting fatal consequences highlights that this infection is of great concern, not just for humans but also for animals Current methods of treatment require increased awareness of physicians and pathologists of GAE or BAE and strong suspicion based on clinical findings. Early diagnosis followed by aggressive treatment using a mixture of drugs is crucial, and even then the prognosis remains extremely poor. -
Evolution of Developmental Signalling in Dictyostelid Social Amoebas
Available online at www.sciencedirect.com ScienceDirect Evolution of developmental signalling in Dictyostelid social amoebas Pauline Schaap Dictyostelia represent a tractable system to resolve the The developmental programme has been most thoroughly evolution of cell-type specialization, with some taxa studied in Dictyostelium discoideum, a robust laboratory differentiating into spores only, and other taxa with additionally model that uses cAMP as a chemoattractant for aggrega- one or up to four somatic cell types. One of the latter forms, tion. The development of genetic transformation, gene Dictyostelium discoideum, is a popular model system for cell knock-out, targeted mutagenesis and high resolution im- biology and developmental biology with key signalling aging techniques in the ’80 and ’90s, make it the organism pathways controlling cell-specialization being resolved of choice for research into fundamental problems in cell recently. For the most dominant pathways, evolutionary origins biology and developmental biology [3]. More recently, it were retraced to a stress response in the unicellular ancestor, has also gained popularity for studies into social conflict while modifications in the ancestral pathway were associated [4], prey–predator interactions [5] and evolution of multi- with acquisition of multicellular complexity. This review cellular complexity [6]. In this review, I will first describe summarizes our current understanding of developmental the developmental signalling mechanisms that control the signalling in D. discoideum and its evolution. life cycle of D. discoideum and next summarize studies aimed to elucidate in which order specific aspects of Address complexity evolved, and how this was associated with School of Life Sciences, University of Dundee, DD15EH Dundee, UK innovations in intercellular communication.