A Prey Item Not Previously Recorded for Bothrops Asper: a Case of Ophiophagy Involving Two Sympatric Pit Viper Species
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Modeling and Partitioning the Nucleotide Evolutionary Process for Phylogenetic and Comparative Genomic Inference
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2007 Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference Todd Castoe University of Central Florida Part of the Biology Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Doctoral Dissertation (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Castoe, Todd, "Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference" (2007). Electronic Theses and Dissertations, 2004-2019. 3111. https://stars.library.ucf.edu/etd/3111 MODELING AND PARTITIONING THE NUCLEOTIDE EVOLUTIONARY PROCESS FOR PHYLOGENETIC AND COMPARATIVE GENOMIC INFERENCE by TODD A. CASTOE B.S. SUNY – College of Environmental Science and Forestry, 1999 M.S. The University of Texas at Arlington, 2001 A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biomolecular Sciences in the Burnett College of Biomedical Sciences at the University of Central Florida Orlando, Florida Spring Term 2007 Major Professor: Christopher L. Parkinson © 2007 Todd A. Castoe ii ABSTRACT The transformation of genomic data into functionally relevant information about the composition of biological systems hinges critically on the field of computational genome biology, at the core of which lies comparative genomics. The aim of comparative genomics is to extract meaningful functional information from the differences and similarities observed across genomes of different organisms. -
HERPETOLOGICAL BULLETIN Number 106 – Winter 2008
The HERPETOLOGICAL BULLETIN Number 106 – Winter 2008 PUBLISHED BY THE BRITISH HERPETOLOGICAL SOCIETY THE HERPETOLOGICAL BULLETIN Contents RESEA R CH AR TICLES Use of transponders in the post-release monitoring of translocated spiny-tailed lizards (Uromastyx aegyptia microlepis) in Abu Dhabi Emirate, United Arab Emirates Pritpal S. Soorae, Judith Howlett and Jamie Samour .......................... 1 Gastrointestinal helminths of three species of Dicrodon (Squamata: Teiidae) from Peru Stephen R. Goldberg and Charles R. Bursey ..................................... 4 Notes on the Natural History of the eublepharid Gecko Hemitheconyx caudicinctus in northwestern Ghana Stephen Spawls ........................................................ 7 Significant range extension for the Central American Colubrid snake Ninia pavimentata (Bocourt 1883) Josiah H. Townsend, J. Micheal Butler, Larry David Wilson, Lorraine P. Ketzler, John Slapcinsky and Nathaniel M. Stewart ..................................... 15 Predation on Italian Newt larva, Lissotriton italicus (Amphibia, Caudata, Salamandridae), by Agabus bipustulatus (Insecta, Coleoptera, Dytiscidae) Luigi Corsetti and Gianluca Nardi........................................ 18 Behaviour, Time Management, and Foraging Modes of a West Indian Racer, Alsophis sibonius Lauren A. White, Peter J. Muelleman, Robert W. Henderson and Robert Powell . 20 Communal egg-laying and nest-sites of the Goo-Eater, Sibynomorphus mikanii (Colubridae, Dipsadinae) in southeastern Brazil Henrique B. P. Braz, Francisco L. Franco -
Predation by the Spider Tidarren Sisyphoides (Walckenaer, 1841) on the Ringneck Coffee Snake Ninia Diademata Baird & Girard, 1853 in Veracruz, Mexico
Herpetology Notes, volume 14: 301-302 (2021) (published online on 09 February 2021) Predation by the spider Tidarren sisyphoides (Walckenaer, 1841) on the Ringneck Coffee Snake Ninia diademata Baird & Girard, 1853 in Veracruz, Mexico Angel Ivan Contreras Calvario1, Manuel de Luna2,*, Abigail Mora Reyes1, and Xavier Contreras Calvario3 The Ringneck Coffee Snake Ninia diademata Baird & from the spider’s web, the snake spasmed and appeared Girard, 1853 is a very small, fossorial dipsadid (up to somewhat rigid. It was collected while still alive but 42 cm in total length). It has a solid black dorsum with died overnight. Both snake and spider were deposited a pale dorsal collar in the neck area and 83–106 and 73– in the herpetological and arachnological collections, 98 subcaudal scales in males and females, respectively. respectively, of the Universidad Autónoma de Nuevo These characteristics differentiate it from its only other León (voucher numbers UANL 8449 for the snake and Mexican congener, the Redback Coffee Snake N. sebae FCB-ATHER 144 for the spider). (Duméril et al., 1854), which has a red dorsum with a The spider was later identified as a female Tidarren black collar in the neck area, often possesses incomplete sisyphoides (Walckenaer, 1841) (Araneae: Theridiidae) black bands on its dorsum, and has fewer subcaudal (Fig. 1B, C) using Levi’s (1970) keys. There are various scales (41–71 in males, 37–60 in females; Heimes, 2016). recorded instances where theridiid spiders have taken Ninia diademata occurs in eastern as well as southern vertebrate prey many times larger than themselves, Mexico, excluding the Yucatán Peninsula, as well as the including snakes (Beaman and Tucker, 2014; Davis et Central American countries of Belize, Guatemala, and al., 2017; Rocha et al., 2017; Nyffeler and Vetter, 2018) Honduras. -
Intrageneric Relationships Among Colubrid Snakes of the Genus Geophis Wagler
MISCELLANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN, NO. 131 Intrageneric Relationships Among Colubrid Snakes of the Genus Geophis Wagler BY FLOYD LESLIE DOWNS College of Wooster, Wooster, Ohio ANN ARBOR MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN JULY 26, 1967 MISCELLANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN The publications of the Museum of Zoology, University of Michigan, consist of two series-the Occasional Papers and the Miscellaneous Publications. Both series were founded by Dr. Bryant Walker, Mr. Bradshaw H. Swales, and Dr. W. W. Newcomb. The Occasional Papers, publication of which was begun in 1913, serve as a medium for original studies bascd principally upon the collections in the Museum. Thcy are issued separately. When a sufficient number of pages has been printed to make a volume, a title page, table of contents, and an index are supplied to libraries and indi- viduals on the mailing list for the series. The Miscellaneous Publications, which include papers on field and museum techniques, monographic studies, and other contributions not within the scope of the Occasional Papers, are published separtely. It is not intended that they be grouped into volumes. Each number has a title page and, when necessary, a table of contents. A complete list of publications on Birds, Fishes, Insects, Mammals, Mollusks, and Reptiles and Amphibians is available. Address inquiries to the Director, Museum of Zoology, Ann Arbor, Michigan. LISTOF MISCELLANEOUSPUBLICATIONS ON REPTILES AND AMPHIBIANS No. The amphibians and reptiles of the Sierra Nevada de Santa Marta, Colom- bia. By ALEXANDERG. RUTHVEN.(1922) 69 pp., 12 pls., 2 figs., 1 map .. -
Final Report for the University of Nottingham / Operation Wallacea Forest Projects, Honduras 2004
FINAL REPORT for the University of Nottingham / Operation Wallacea forest projects, Honduras 2004 TABLE OF CONTENTS FINAL REPORT FOR THE UNIVERSITY OF NOTTINGHAM / OPERATION WALLACEA FOREST PROJECTS, HONDURAS 2004 .....................................................................................................................................................1 INTRODUCTION AND OVERVIEW ..............................................................................................................................3 List of the projects undertaken in 2004, with scientists’ names .........................................................................4 Forest structure and composition ..................................................................................................................................... 4 Bat diversity and abundance ............................................................................................................................................ 4 Bird diversity, abundance and ecology ............................................................................................................................ 4 Herpetofaunal diversity, abundance and ecology............................................................................................................. 4 Invertebrate diversity, abundance and ecology ................................................................................................................ 4 Primate behaviour........................................................................................................................................................... -
Repertoire of Antipredator Displays in the Semifossorial Snake Ninia Atrata (Hallowell, 1845) (Serpentes: Dipsadidae)
Herpetology Notes, volume 8: 339-344 (2015) (published online on 16 June 2015) Repertoire of antipredator displays in the semifossorial snake Ninia atrata (Hallowell, 1845) (Serpentes: Dipsadidae) Teddy Angarita-Sierra1, 2 The semifossorial snake Ninia atrata is a widespread predator attacks in natural environment. Fieldwork was Neotropical species that ranges from western Panama, carried out in oil palm plantation of PALMASOL S.A. Colombia, Ecuador, Venezuela to Trinidad and Tobago, at Vereda La Castañeda, municipality of San Martin, at altitudes between sea level and 1000 m a.s.l. (McCranie department of Meta-Colombia (3°31´46, 6” N; 73°32´15, and Wilson, 1995; Savage, 2002; Angarita-Sierra, 3” W). The plantation is located on the piedmont forests 2009; 2014). Ninia atrata inhabits leaf litter in almost of the eastern slopes of the Cordillera Oriental, as well all habitats, including the Amazonian and Chocoan as on high savanna plateaus. Annual rainfall at the site rainforests, the evergreen forest of the main Andean is 3,070 mm. Individuals of N. atrata were found by rivers, the Orinoquian savannas, and the xerophitic systematic search between August 2014 and January forest at the Caribbean coast (Rangel-Ch, 2004; 2012; 2015. Searches were conducted by removing piles of Angarita-Sierra, 2009; 2014). This species has a high palm leaves from 8:00h to 17:30h. Immediately after tolerance to disturbed or transformed habitats such as each encounter, individuals were put in cloth bags to oil palm plantations and annual crops. Recently, aspects be measured and marked. A session of predator attack of its hemipenial morphology, taxonomy, phylogeny simulations was performed the next morning before and geographic variation have been studied (McCranie releasing the snakes at the same place where they were and Wilson, 1995; Ingrasci, 2011; Angarita-Sierra, caught. -
Reptiles and Amphibians of Lamanai Outpost Lodge, Belize
Reptiles and Amphibians of the Lamanai Outpost Lodge, Orange Walk District, Belize Ryan L. Lynch, Mike Rochford, Laura A. Brandt and Frank J. Mazzotti University of Florida, Fort Lauderdale Research and Education Center; 3205 College Avenue; Fort Lauderdale, Florida 33314 All pictures taken by RLL: [email protected] and MR: [email protected] Vaillant’s Frog Rio Grande Leopard Frog Common Mexican Treefrog Rana vaillanti Rana berlandieri Smilisca baudinii Veined Treefrog Red Eyed Treefrog Stauffer’s Treefrog Phrynohyas venulosa Agalychnis callidryas Scinax staufferi White-lipped Frog Fringe-toed Foam Frog Fringe-toed Foam Frog Leptodactylus labialis Leptodactylus melanonotus Leptodactylus melanonotus 1 Reptiles and Amphibians of the Lamanai Outpost Lodge, Orange Walk District, Belize Ryan L. Lynch, Mike Rochford, Laura A. Brandt and Frank J. Mazzotti University of Florida, Fort Lauderdale Research and Education Center; 3205 College Avenue; Fort Lauderdale, Florida 33314 All pictures taken by RLL: [email protected] and MR: [email protected] Tungara Frog Marine Toad Gulf Coast Toad Physalaemus pustulosus Bufo marinus Bufo valliceps Sheep Toad House Gecko Dwarf Bark Gecko Hypopachus variolosus Hemidactylus frenatus Shaerodactylus millepunctatus Turnip-tailed Gecko Yucatan Banded Gecko Yucatan Banded Gecko Thecadactylus rapicaudus Coleonyx elegans Coleonyx elegans 2 Reptiles and Amphibians of the Lamanai Outpost Lodge, Orange Walk District, Belize Ryan L. Lynch, Mike Rochford, Laura A. Brandt and Frank J. Mazzotti University -
GEOGRAPHICAL DISTRIBUTION of Ninia Hudsoni (SERPENTES: DIPSADIDAE) with NEW OCCURRENCE RECORDS
Oecologia Australis 20(4): pp-pp, 2016 10.4257/oeco.2016.2004.14 GEOGRAPHICAL DISTRIBUTION OF Ninia hudsoni (SERPENTES: DIPSADIDAE) WITH NEW OCCURRENCE RECORDS Vinícius de Avelar São-Pedro1*, Marco Antônio de Freitas2, Eliana Faria de Oliveira3, Nathocley Mendes Venâncio4 & Alexandre Pinheiro Zanotti5 1Universidade Federal do Rio Grande do Norte, Departamento de Fisiologia, Laboratório de Ecologia Sensorial, Centro de Biociências, Campus Lagoa Nova, Natal, RN, Brasil. CEP 59078-900 2Instituto Chico Mendes de Conservação da Biodiversidade (ICMBio), Parque Nacional do Catimbau, Vila Catimbau, Buíque, PE, Brasil. CEP 56537-000 3Universidade Federal de Mato Grosso do Sul, Centro de Ciências Biológicas e da Saúde, Laboratório de Zoologia, Cidade Universitária, Campo Grande, MS, Brasil. CEP 79070-900 4 META - FAMETA, Estrada Alberto Torres, 947, Bairro da Paz, Rio Branco, AC, Brasil. CEP 69919-230 5Serpentário Mata Sul, Rua 6 casa 25, Bairro Pedrinhas, Rio Formoso, PE, Brasil. CEP 55570-000 E-mails: [email protected], [email protected], [email protected], [email protected], [email protected] Keywords: biogeography; ecological niche; species distribution modeling; snakes The Neotropical snake genus Ninia (Dipsadidae, (ENM) to predict climatically suitable areas for the Dipsadinae, Dipsadini) currently comprises ten species: occurrence of N. hudsoni in northern South America. Ninia atrata (Hallowell, 1845), Ninia celata In order to compile data on the known McCranie & Wilson, 1995, Ninia espinali McCranie distribution of Ninia hudsoni we searched occurrence & Wilson, 1995, Ninia diademata Baird & Girard, records on the literature (papers, books and theses) 1853, Ninia franciscoi Angarita-Sierra 2014, Ninia and accessed some herpetological collections hudsoni Parker, 1940, Ninia maculata (Peters, 1861), databases by contacting curators or through institutional Ninia pavimentata (Bocourt 1883), Ninia psephota websites (e.g. -
Porthidium Lansbergii Rozei) Snake´S Venom Causing Human Accidents in Eastern Venezuela Investigación Clínica, Vol
Investigación Clínica ISSN: 0535-5133 Universidad del Zulia Girón, María E.; Ramos, María I.; Cedeño, Luisneidys; Carrasquel, Axl; Sánchez, Elda E.; Navarrete, Luis F.; Rodríguez-Acosta, Alexis Exploring the biochemical, haemostatic and toxinological aspects of mapanare dry-tail (Porthidium lansbergii rozei) snake´s venom causing human accidents in Eastern Venezuela Investigación Clínica, vol. 59, no. 3, 2018, July-September, pp. 260-277 Universidad del Zulia DOI: https://doi.org/10.22209/IC.v59n3a06 Available in: https://www.redalyc.org/articulo.oa?id=372960219007 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Journal's webpage in redalyc.org Portugal Project academic non-profit, developed under the open access initiative Invest Clin 59(3): 260 - 277, 2018 https://doi.org/10.22209/IC.v59n3a06 Exploring the biochemical, haemostatic and toxinological aspects of mapanare dry-tail (Porthidium lansbergii rozei) snake´s venom causing human accidents in Eastern Venezuela María E. Girón1, María I. Ramos1, Luisneidys Cedeño1, Axl Carrasquel1, Elda E. Sánchez2, Luis F. Navarrete1 and Alexis Rodríguez-Acosta1 1Laboratorio de Inmunoquímica y Ultraestructura, Instituto Anatómico “José Izquierdo”, Facultad de Medicina, Universidad Central de Venezuela, Caracas, Venezuela. 2National Natural Toxins Research Center (NTRC), Texas A&M University-Kingsville, MSC 158, Kingsville, TX, USA. Key words: Porthidium lansbergii rozei; fibrinolysis; haemorrhages; lethality; venom. Abstract. Porthidium lansbergii rozei (P.l.rozei) is a snake species belonging to the Venezuelan ophidian-fauna causing relatively frequent human accidents. This study has been developed to enrich the medical information about this snake´s accident, which is often handled with difficulties due to the ignorance about its toxic activities. -
Reptiles Del Bosque Seco Estacional En El Caribe
ACTA BIOLÓGICA COLOMBIANA http://www.revistas.unal.edu.co/index.php/actabiol SEDE BOGOTÁ FACULTAD DE CIENCIAS ARTÍCULODEPARTAMENTO DE DE INVESTIGACIÓN/RESEARCH BIOLOGÍA ARTICLE REPTILES DEL BOSQUE SECO ESTACIONAL EN EL CARIBE COLOMBIANO: DISTRIBUCIÓN DE LOS HÁBITATS Y DEL RECURSO ALIMENTARIO Reptiles from the Seasonal Dry Forest the Caribbean Region: Distribution of Habitat and use of Food Resource Luis Eduardo ROJAS MURCIA1, Juan E. CARVAJAL COGOLLO1, Javier Alejandro CABREJO BELLO1. 1 Grupo Biología de la Conservación, Laboratorio Museo de Historia Natural Luis Gonzalo Andrade. Universidad Pedagógica y Tecnológica de Colombia, Av. Central del Norte. Tunja, Colombia. 2 Grupo Biodiversidad y Conservación, Línea Reptiles, Instituto de Ciencias Naturales, Universidad Nacional de Colombia. Bogotá, D.C., Colombia. For correspondence. [email protected] Received: 4th March 2015, Returned for revision: 18th April 2015, Accepted: 30th November 2015. Associate Editor: Martha Ramírez Pinilla. Citation / Citar este artículo como: Rojas Murcia LE, Carvajal Cogollo JE, Cabrejo Bello JA. Reptiles del bosque seco estacional en el Caribe Colombiano: distribución de los hábitats y del recurso alimentario. Acta biol. Colomb. 2016;21(2):365-377. doi: http://dx.doi.org/10.15446/abc.v21n2.49393 RESUMEN Con el fin de caracterizar la distribución horizontal (repartición de los hábitats) y la utilización del recurso alimentario (tipo y tamaño de las presas) del ensamblaje de reptiles del bosque seco estacional al norte de la región Caribe de Colombia, en el departamento del Cesar, se realizaron cinco salidas de campo con una duración de doce días cada una. Los muestreos se realizaron en jornadas diurnas y nocturnas, en un diseño de transectos replicados a lo largo de diferentes hábitats que incluyeron: pastizales, bordes e interiores de bosque. -
Ninia Atrata (Coffee Snake)
UWI The Online Guide to the Animals of Trinidad and Tobago Diversity Ninia atrata (Coffee Snake) Family: Dipsadidae (Rear-fanged Snakes) Order: Squamata (Lizards and Snakes) Class: Reptilia (Reptiles) Fig. 1. Coffee snake, Ninia atrata. [https://en.wikipedia.org/wiki/Ninia_atrata#/media/File:Ninia_atrata.jpg, downloaded 25 October 2016] TRAITS. The coffee snake Ninia atrata is a small snake that can grow up to 49cm long. They typically have a band of coloured scales or collar around the head; these scales may be red-orange in colour, while the rest of the body is covered with blue-black scales (Fig. 1). In older adults, however, the collar may be faded or absent. DISTRIBUTION. They are found in the South American region (Fig. 2), and are native to Trinidad and Tobago, Venezuela, Panama, Ecuador and Colombia. HABITAT AND ECOLOGY. The coffee snake tends to inhabit rainforests, for example, the rainforests of the Amazon, Choco and the Caribbean, as well as in savannas of the Orinoco. Places such as gardens, crop plantations and hills may make a good habitat for Ninia atrata, which may climb in shrubs (Fig. 3). They tend to eat slugs and one of their predators is the coral snake. Ninia atrata are oviparous, meaning they lay eggs (Fig. 2). Female coffee snakes have the same characteristics no matter where they are native to, whereas the traits of males vary according to their geographical location (Angarita-Sierra, 2009). UWI The Online Guide to the Animals of Trinidad and Tobago Diversity BEHAVIOUR. The coffee snake is very active during the night time. -
SERPENTES: DIPSADIDAE) AS PREY of the CORAL SNAKE Micrurus Hemprichii Ortonii (SERPENTES: ELAPIDAE) in NORTHWESTERN AMAZONIA*
BOLETÍN CIENTÍFICO bol.cient.mus.hist.nat. 22 (1), enero-junio, 2018. 102-105. ISSN: 0123-3068 (Impreso) ISSN: 2462-8190 (En línea) CENTRO DE MUSEOS MUSEO DE HISTORIA NATURAL SHORT COMUNICATION Ninia hudsoni (SERPENTES: DIPSADIDAE) AS PREY OF THE CORAL SNAKE Micrurus hemprichii ortonii (SERPENTES: ELAPIDAE) IN NORTHWESTERN AMAZONIA* Julián Andrés Rojas-Morales1,2*, Fabián Andrés Cabrera-Vargas3 & Diego Huseth Ruiz-Valderrama2,4 Abstract Objective: To make a description of a predatory event by the Micrurus hemprichii ortonii coral snake on the Ninia hudsoni snake. Scope: Contribution to the knowledge of the natural history of Neotropical snakes, particularly in relation to trophic interactions. Methodology: Dissection in the laboratory. Main result: Th is is the fi rst record of the trophic interaction between M. h. ortonii and N. hudsoni. Conclusions: Th e relation between the total length of the prey and the snout-vent length of the predator was very high (>90%), indicating that this species of coral snake can ingest preys of great volume and size in relation to its own body. Key words: Colombia, predación, serpientes, Amazonas Ninia hudsoni (SERPIENTE: DIPSADIDAE) COMO PRESA DE LA SERPIENTE CORAL Micrurus hemprichii ortonii (SERPIENTE: ELAPIDAE) EN EL NOROESTE DE LA AMAZONÍA Resumen Objetivo: Realizar una descripción de un evento depredatorio por parte de la serpiente coral Micrurus hemprichii ortonii sobre la serpiente Ninia hudsoni. Alcance: Contribuir al conocimiento de la historia natural de serpientes neotropicales, particularmente en lo referente a interacciones trófi cas.Metodología: Disección en laboratorio. Principal resultado: Este es el primer registro de interacción trófi ca entre M. h.