NADPH Oxidases: an Overview from Structure to Innate Immunity-Associated Pathologies
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Elevated Hydrogen Peroxide and Decreased Catalase and Glutathione
Sullivan-Gunn and Lewandowski BMC Geriatrics 2013, 13:104 http://www.biomedcentral.com/1471-2318/13/104 RESEARCH ARTICLE Open Access Elevated hydrogen peroxide and decreased catalase and glutathione peroxidase protection are associated with aging sarcopenia Melanie J Sullivan-Gunn1 and Paul A Lewandowski2* Abstract Background: Sarcopenia is the progressive loss of skeletal muscle that contributes to the decline in physical function during aging. A higher level of oxidative stress has been implicated in aging sarcopenia. The current study aims to determine if the higher level of oxidative stress is a result of increased superoxide (O2‾ ) production by the NADPH oxidase (NOX) enzyme or decrease in endogenous antioxidant enzyme protection. Methods: Female Balb/c mice were assigned to 4 age groups; 6, 12, 18 and 24 months. Body weight and animal survival rates were recorded over the course of the study. Skeletal muscle tissues were collected and used to measure NOX subunit mRNA, O2‾ levels and antioxidant enzymes. Results: Key subunit components of NOX expression were elevated in skeletal muscle at 18 months, when sarcopenia was first evident. Increased superoxide dismutase 1 (SOD1) activity suggests an increase in O2‾ dismutation and this was further supported by elevated levels of hydrogen peroxide (H2O2) and decline in catalase and glutathione peroxidase (GPx) antioxidant protection in skeletal muscle at this time. NOX expression was also higher in skeletal muscle at 24 months, however this was coupled with elevated levels of O2‾ and a decline in SOD1 activity, compared to 6 and 12 months but was not associated with further loss of muscle mass. -
Unexpected Intracellular Biodegradation and Recrystallization
Unexpected intracellular biodegradation and recrystallization of gold nanoparticles Alice Balfouriera, Nathalie Luciania, Guillaume Wangb, Gerald Lelongc, Ovidiu Ersend, Abdelali Khelfab, Damien Alloyeaub, Florence Gazeaua,1,2 , and Florent Carna,1,2 aLaboratoire Matiere` et Systemes` Complexes, CNRS, Universite´ de Paris, Paris 75205 Cedex 13, France; bLaboratoire Materiaux´ et Phenom´ enes` Quantiques, CNRS, Universite´ de Paris, Paris 75205 Cedex 13, France; cMuseum´ National d’Histoire Naturelle, CNRS, Institut de Recherche pour le Developpement´ (IRD), Institut de Mineralogie,´ de Physique des Materiaux´ et de Cosmochimie, Sorbonne Universite,´ Paris 75005, France; and dInstitut de Physique et Chimie des Materiaux´ de Strasbourg, Universite´ de Strasbourg, CNRS, Strasbourg 67087, France Edited by Catherine J. Murphy, University of Illinois at Urbana–Champaign, Urbana, IL, and approved November 18, 2019 (received for review July 10, 2019) Gold nanoparticles are used in an expanding spectrum of biomed- processes have been described for metal or metal oxide nanopar- ical applications. However, little is known about their long-term ticles, but only few concern GNPs (23–25). As a noble metal, gold fate in the organism as it is generally admitted that the inert- is more inert, less sensitive to acidic environment, and less reac- ness of gold nanoparticles prevents their biodegradation. In this tive than most other metals and metal oxide (26). Therefore, the work, the biotransformations of gold nanoparticles captured by current dogma is that the inertness of gold prevents biodegra- primary fibroblasts were monitored during up to 6 mo. The combi- dation of gold implants or GNPs that could be left indefinitely nation of electron microscopy imaging and transcriptomics study intact in tissues. -
In Vitro Treatment of Hepg2 Cells with Saturated Fatty Acids Reproduces
© 2015. Published by The Company of Biologists Ltd | Disease Models & Mechanisms (2015) 8, 183-191 doi:10.1242/dmm.018234 RESEARCH ARTICLE In vitro treatment of HepG2 cells with saturated fatty acids reproduces mitochondrial dysfunction found in nonalcoholic steatohepatitis Inmaculada García-Ruiz1,*, Pablo Solís-Muñoz2, Daniel Fernández-Moreira3, Teresa Muñoz-Yagüe1 and José A. Solís-Herruzo1 ABSTRACT INTRODUCTION Activity of the oxidative phosphorylation system (OXPHOS) is Nonalcoholic fatty liver disease (NAFLD) represents a spectrum of decreased in humans and mice with nonalcoholic steatohepatitis. liver diseases extending from pure fatty liver through nonalcoholic Nitro-oxidative stress seems to be involved in its pathogenesis. The steatohepatitis (NASH) to cirrhosis and hepatocarcinoma that occurs aim of this study was to determine whether fatty acids are implicated in individuals who do not consume a significant amount of alcohol in the pathogenesis of this mitochondrial defect. In HepG2 cells, we (Matteoni et al., 1999). Although the pathogenesis of NAFLD analyzed the effect of saturated (palmitic and stearic acids) and remains undefined, the so-called ‘two hits’ model of pathogenesis monounsaturated (oleic acid) fatty acids on: OXPHOS activity; levels has been proposed (Day and James, 1998). Whereas the ‘first hit’ of protein expression of OXPHOS complexes and their subunits; gene involves the accumulation of fat in the liver, the ‘second hit’ expression and half-life of OXPHOS complexes; nitro-oxidative stress; includes oxidative stress resulting in inflammation, stellate cell and NADPH oxidase gene expression and activity. We also studied the activation, fibrogenesis and progression of NAFLD to NASH effects of inhibiting or silencing NADPH oxidase on the palmitic-acid- (Chitturi and Farrell, 2001). -
ARS-2014-6136-Ver9-Huang 6P 973..984
ANTIOXIDANTS & REDOX SIGNALING Volume 23, Number 12, 2015 DOI: 10.1089/ars.2014.6136 ORIGINAL RESEARCH COMMUNICATION Redox Regulation of Pro-IL-1b Processing May Contribute to the Increased Severity of Serum-Induced Arthritis in NOX2-Deficient Mice Ya-Fang Huang,1 Pei-Chi Lo,1 Chia-Liang Yen,2 Peter Andrija Nigrovic,3,4 Wen-Chen Chao,1,5 Wei-Zhi Wang,1 George Chengkang Hsu,1 Yau-Sheng Tsai,1 and Chi-Chang Shieh1,6 Abstract Aims: To elucidate the role of reactive oxygen species (ROS) in arthritis and to identify targets of arthritis treatment in conditions with different levels of oxidant stress. Results: Through establishing an arthritis model by injecting arthritogenic serum into wild-type and NADPH oxidase 2 (NOX2)-deficient mice, we found that arthritis had a neutrophilic infiltrate and was more severe in Ncf1 - / - mice, a mouse strain lacking the expression of the NCF1/p47phox component of NOX2. The levels of interleukin-1b (IL-1b) and IL-6 in inflamed joints were higher in Ncf1 - / - than in controls. Antagonists of tumor necrosis factor-a (TNFa) and IL-1b were equally effective in suppressing arthritis in wild-type mice, while IL-1b blockade was more effective than TNFa blockade in Ncf1 - / - mice. A treatment of caspase inhibitor and the combination treatment of a caspase inhibitor and a cathepsin inhibitor, but not a cathepsin inhibitor alone, suppressed arthritic severity in the wild-type mice, while a treatment of cathepsin inhibitor and the combination treatment of a caspase inhibitor and a cathepsin inhibitor, but not a caspase inhibitor alone, were effective in treating Ncf1 - / - mice. -
Follicular Thyroglobulin Enhances Gene Expression Necessary for Thyroid Hormone Secretion
Endocrine Journal 2015, 62 (11), 1007-1015 Original Follicular thyroglobulin enhances gene expression necessary for thyroid hormone secretion Yuko Ishido1), 2), 3), Yuqian Luo1), 3), Aya Yoshihara1), 3), Moyuru Hayashi3), Akio Yoshida2), Ichiro Hisatome2) and Koichi Suzuki1), 3) 1) Laboratory of Molecular Diagnostics, Department of Mycobacteriology, Leprosy Research Center, National Institute of Infectious Disease, Tokyo 189-0002, Japan 2) Division of Regenerative Medicine and Therapeutics, Department of Genetic Medicine and Regenerative Therapeutics, Institute of Regenerative Medicine and Biofunction, Tottori University Graduate School of Medical Science, Yonago, 683-8503, Japan 3) Department of Clinical Laboratory Science, Faculty of Medical Technology, Teikyo University, Tokyo 173-8605, Japan Abstract. We have previously shown that follicular thyroglobulin (Tg) has an unexpected function as an autocrine negative- feedback regulator of thyroid hormone (TH) biosynthesis. Tg significantly suppressed the expression of genes necessary for iodide transport and TH synthesis by counteracting stimulation by TSH. However, whether follicular Tg also regulates intracellular TH transport and its secretion from thyrocytes is not known. In the present study, we examined the potential effect of follicular Tg on TH transport and secretion by quantifying the expression of two TH transporters: monocarboxylate transporter 8 (MCT8) and μ-crystallin (CRYM). Our results showed that follicular Tg at physiologic concentrations enhanced both the mRNA and protein expression levels of MCT8 and CRYM in a time- and dose-dependent manner in rat thyroid FRTL-5 cells. Although both the sodium/iodide symporter (NIS), an essential transporter of iodide from blood into the thyroid, and MCT8, a transporter of synthesized TH from the gland, were co-localized on the basolateral membrane of rat thyrocytes in vivo, Tg decreased NIS expression and increased the expression of MCT8 by counteracting TSH action. -
Cytochrome P450 Enzymes but Not NADPH Oxidases Are the Source of the MARK NADPH-Dependent Lucigenin Chemiluminescence in Membrane Assays
Free Radical Biology and Medicine 102 (2017) 57–66 Contents lists available at ScienceDirect Free Radical Biology and Medicine journal homepage: www.elsevier.com/locate/freeradbiomed Cytochrome P450 enzymes but not NADPH oxidases are the source of the MARK NADPH-dependent lucigenin chemiluminescence in membrane assays Flávia Rezendea, Kim-Kristin Priora, Oliver Löwea, Ilka Wittigb, Valentina Streckerb, Franziska Molla, Valeska Helfingera, Frank Schnütgenc, Nina Kurrlec, Frank Wempec, Maria Waltera, Sven Zukunftd, Bert Luckd, Ingrid Flemingd, Norbert Weissmanne, ⁎ ⁎ Ralf P. Brandesa, , Katrin Schrödera, a Institute for Cardiovascular Physiology, Goethe-University, Frankfurt, Germany b Functional Proteomics, SFB 815 Core Unit, Goethe-Universität, Frankfurt, Germany c Institute for Molecular Hematology, Goethe-University, Frankfurt, Germany d Institute for Vascular Signaling, Goethe-University, Frankfurt, Germany e University of Giessen, Lung Center, Giessen, Germany ARTICLE INFO ABSTRACT Keywords: Measuring NADPH oxidase (Nox)-derived reactive oxygen species (ROS) in living tissues and cells is a constant NADPH oxidase challenge. All probes available display limitations regarding sensitivity, specificity or demand highly specialized Nox detection techniques. In search for a presumably easy, versatile, sensitive and specific technique, numerous Lucigenin studies have used NADPH-stimulated assays in membrane fractions which have been suggested to reflect Nox Chemiluminescence activity. However, we previously found an unaltered activity with these assays in triple Nox knockout mouse Superoxide (Nox1-Nox2-Nox4-/-) tissue and cells compared to wild type. Moreover, the high ROS production of intact cells Reactive oxygen species Membrane assays overexpressing Nox enzymes could not be recapitulated in NADPH-stimulated membrane assays. Thus, the signal obtained in these assays has to derive from a source other than NADPH oxidases. -
Natural Course of Congenital Hypothyroidism by Dual Oxidase 2 Mutations from the Neonatal Period Through Puberty
Y Maruo and others Clinical features of DUOX2 174:4 453–463 Clinical Study defects Natural course of congenital hypothyroidism by dual oxidase 2 mutations from the neonatal period through puberty Yoshihiro Maruo1, Keisuke Nagasaki, Katsuyuki Matsui, Yu Mimura, Asami Mori, Maki Fukami2 and Yoshihiro Takeuchi Correspondence should be addressed Department of Pediatrics, Shiga University of Medical Science, Tsukinowa, Seta, Otsu, Shiga 520-2192, Japan, to Y Maruo 1Department of Pediatrics, Niigata University, Niigata, Japan and 2Department of Molecular Endocrinology, Email National Research Institute for Child Health and Development, Tokyo, Japan [email protected] Abstract Aim: We previously reported that biallelic mutations in dual oxidase 2 (DUOX2) cause transient hypothyroidism. Since then, many cases with DUOX2 mutations have been reported. However, the clinical features and prognosis of individuals with DUOX2 defects have not been clarified. Objective: We investigated the prognosis of patients with congenital hypothyroidism (CH) due to DUOX2 mutations. Patients: Twenty-five patients were identified by a neonatal screening program and included seven familial cases. Their serum TSH values ranged from 18.9 to 734.6 mU/l. Twenty-two of the patients had low serum free thyroxine (fT4) levels (0.17–1.1 ng/dl). Twenty-four of the patients were treated with L-thyroxine. Methods: We analyzed the DUOX2, thyroid peroxidase, NaC/IK symporter, and dual oxidase maturation factor 2 genes of these 25 patients by PCR-amplified direct sequencing. An additional 11 genes were analyzed in 11 of the 25 patients using next-generation sequencing. Results: All patients had biallelic DUOX2 mutations, and seven novel alleles were detected. -
Original Article Extracellular-Vesicles Derived from Human Wharton-Jelly Mesenchymal Stromal Cells Ameliorated Cyclosporin A-Induced Renal Fibrosis in Rats
Int J Clin Exp Med 2019;12(7):8943-8949 www.ijcem.com /ISSN:1940-5901/IJCEM0091514 Original Article Extracellular-vesicles derived from human Wharton-Jelly mesenchymal stromal cells ameliorated cyclosporin A-induced renal fibrosis in rats Guangyuan Zhang1, Shuyang Yu3, Si Sun1, Lei Zhang1, Guangli Zhang4, Kai Xu1, Yuxiao Zheng1,2, Qin Xue4, Ming Chen1 1Department of Urology, Zhongda Hospital, Southeast University, Nanjing 210009, China; 2Department of Urologic Surgery, Jiangsu Cancer Hospital & Jiangsu Institute of Cancer Research & Affiliated Cancer Hospital of Nanjing Medical University, Nanjing 210009, China; 3Department of Radiology, Dezhou United Hospital, Dezhou 253017, Shandong, China; 4Department of Nephrology, Shanghai Jiao Tong University Affiliated Sixth People’s Hospital, Shanghai 200233, China Received January 19, 2019; Accepted April 11, 2019; Epub July 15, 2019; Published July 30, 2019 Abstract: Objective: To observe the therapeutic effects of human Wharton-Jelly mesenchymal stromal cells derived extracellular vesicles (MSCs-EVs) for cyclosporin-A-induced renal injury in rats and further to investigate the mecha- nism. Methods: EVs from MSCs were made using the ultra-centrifugation method. The cyclosporin A-induced renal injury model in rats was set up, and MSCs-EVs were administrated at d7 and d21 intravenously. The animals were sacrificed at d28, and the serum and kidneys were obtained. Renal fibrosis was assessed using Masson’s staining and α-SMA IHC staining. Renal function was determined using serum creatinine. The SOD and malondialdehyde (MDA) in the renal tissues were also assayed. In vitro, HK2 cells were injured by CsA for 24 h as well as incubated with MSCs-EVs administration, and ROS and α-SMA expression were assessed. -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Biophysics News
NEWSLETTER VOLUME 5, ISSUE 1 | WINTER 2020 BIOPHYSICS NEWS SCIENCE FEATURE SEMINAR SERIES Sean McGarry, biophysics graduate student in the LaViolette lab, discusses his Our Spring 2020 Graduate Seminar Se- research interests. ries takes place most Fridays through- My research interests lie in translating My research has evolved to focus on out the semester, from 9:30–10:30 am. machine learning techniques into clini- quantifying the effects of these sources Please join us! cal practice in a manner that improves of variability on the generalizability of Jan 17 | Rodney Willoughby, MD inter-user reliability. The LaViolette lab machine learning algorithms. The LaVi- (MCW), Gaseous microintoxication by works in a subfield called rad-path (ra- olette lab acquired a dataset of whole invasive bacteria diology-pathology) correlation. We align mount prostate slides annotated by five Jan 24 | Sarah Erickson-Bhatt, PhD post-surgical tissue samples with in vivo pathologists, and we used this dataset to (Marquette), Bioimaging of cancer clinical imaging and write pattern detec- demonstrate that inter-observer vari- tion algorithms that predict histological ability can have a substantial effect on Jan 31 | Sean McGarry (MCW), Prostate characteristics noninvasively. the predictive power of a downstream cancer detection with multi-parametric MRI Many sources of variability outside of the machine learning algorithm. We com- parameters of interest can influence the piled a dataset of diffusion fits from 13 Feb 14 | Jon M. Fukuto, PhD (Sonoma output of a machine learning algorithm, institutions and examined the effects of State), The chemical biology of hydrop- particularly in magnetic resonance imag- post-processing decisions on the per- ersulfides: Possible cellular protecting ing. -
The Relationship of NADPH Oxidases and Heme Peroxidases: Fallin' In
MINI REVIEW published: 05 March 2019 doi: 10.3389/fimmu.2019.00394 The Relationship of NADPH Oxidases and Heme Peroxidases: Fallin’ in and Out Gábor Sirokmány 1,2* and Miklós Geiszt 1,2* 1 Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary, 2 “Momentum” Peroxidase Enzyme Research Group of the Semmelweis University and the Hungarian Academy of Sciences, Budapest, Hungary Peroxidase enzymes can oxidize a multitude of substrates in diverse biological processes. According to the latest phylogenetic analysis, there are four major heme peroxidase superfamilies. In this review, we focus on certain members of the cyclooxygenase-peroxidase superfamily (also labeled as animal heme peroxidases) and their connection to specific NADPH oxidase enzymes which provide H2O2 for the Edited by: Gabor Csanyi, one- and two-electron oxidation of various peroxidase substrates. The family of NADPH Augusta University, United States oxidases is a group of enzymes dedicated to the production of superoxide and hydrogen Reviewed by: peroxide. There is a handful of known and important physiological functions where Tohru Fukai, Augusta University, United States one of the seven known human NADPH oxidases plays an essential role. In most of Patrick Pagano, these functions NADPH oxidases provide H2O2 for specific heme peroxidases and University of Pittsburgh, United States the concerted action of the two enzymes is indispensable for the accomplishment *Correspondence: of the biological function. We discuss human and other metazoan examples of such Gábor Sirokmány sirokmany.gabor@ cooperation between oxidases and peroxidases and analyze the biological importance med.semmelweis-univ.hu of their functional interaction. We also review those oxidases and peroxidases where this Miklós Geiszt geiszt.miklos@ kind of partnership has not been identified yet. -
Clinical Genetics of Defects in Thyroid Hormone Synthesis
Review article https://doi.org/10.6065/apem.2018.23.4.169 Ann Pediatr Endocrinol Metab 2018;23:169-175 Clinical genetics of defects in thyroid hormone synthesis Min Jung Kwak, MD, PhD Thyroid dyshormonogenesis is characterized by impairment in one of the several stages of thyroid hormone synthesis and accounts for 10%–15% of Department of Pediatrics, Pusan congenital hypothyroidism (CH). Seven genes are known to be associated with National University Hospital, Pusan thyroid dyshormonogenesis: SLC5A5 (NIS), SCL26A4 (PDS), TG, TPO, DUOX2, National University School of Medicine, Busan, Korea DUOXA2, and IYD (DHEAL1). Depending on the underlying mechanism, CH can be permanent or transient. Inheritance is usually autosomal recessive, but there are also cases of autosomal dominant inheritance. In this review, we describe the molecular basis, clinical presentation, and genetic diagnosis of CH due to thyroid dyshormonogenesis, with an emphasis on the benefits of targeted exome sequencing as an updated diagnostic approach. Keywords: Congenital hypothyroidism, Dyshormonogenesis, Genetics, Whole exome sequencing Introduction Congenital hypothyroidism (CH) is the most common pediatric endocrinological disorder and an important cause of preventable mental retardation.1) After the introduction of neonatal screening for CH, the incidence was 1 case per 3,684 live births,2) but the incidence has increased to 1 case per 1,000–2,000 live births of late.3) Primary CH is usually caused by abnormal thyroid gland development, but 10%–15% of cases are caused