Elevated Hydrogen Peroxide and Decreased Catalase and Glutathione
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Catalase and Oxidase Test
CATALASE TEST Catalase is the enzyme that breaks hydrogen peroxide (H 2O2) into H 2O and O 2. Hydrogen peroxide is often used as a topical disinfectant in wounds, and the bubbling that is seen is due to the evolution of O 2 gas. H 2O2 is a potent oxidizing agent that can wreak havoc in a cell; because of this, any cell that uses O 2 or can live in the presence of O 2 must have a way to get rid of the peroxide. One of those ways is to make catalase. PROCEDURE a. Place a small amount of growth from your culture onto a clean microscope slide. If using colonies from a blood agar plate, be very careful not to scrape up any of the blood agar— blood cells are catalase positive and any contaminating agar could give a false positive. b. Add a few drops of H 2O2 onto the smear. If needed, mix with a toothpick. DO NOT use a metal loop or needle with H 2O2; it will give a false positive and degrade the metal. c. A positive result is the rapid evolution of O 2 as evidenced by bubbling. d. A negative result is no bubbles or only a few scattered bubbles. e. Dispose of your slide in the biohazard glass disposal container. Dispose of any toothpicks in the Pipet Keeper. OXIDASE TEST Basically, this is a test to see if an organism is an aerobe. It is a check for the presence of the electron transport chain that is the final phase of aerobic respiration. -
Myeloperoxidase Mediates Cell Adhesion Via the Αmβ2 Integrin (Mac-1, Cd11b/CD18)
Journal of Cell Science 110, 1133-1139 (1997) 1133 Printed in Great Britain © The Company of Biologists Limited 1997 JCS4390 Myeloperoxidase mediates cell adhesion via the αMβ2 integrin (Mac-1, CD11b/CD18) Mats W. Johansson1,*, Manuel Patarroyo2, Fredrik Öberg3, Agneta Siegbahn4 and Kenneth Nilsson3 1Department of Physiological Botany, University of Uppsala, Villavägen 6, S-75236 Uppsala, Sweden 2Microbiology and Tumour Biology Centre, Karolinska Institute, PO Box 280, S-17177 Stockholm, Sweden 3Department of Pathology, University of Uppsala, University Hospital, S-75185 Uppsala, Sweden 4Department of Clinical Chemistry, University of Uppsala, University Hospital, S-75185 Uppsala, Sweden *Author for correspondence (e-mail: [email protected]) SUMMARY Myeloperoxidase is a leukocyte component able to to αM (CD11b) or to β2 (CD18) integrin subunits, but not generate potent microbicidal substances. A homologous by antibodies to αL (CD11a), αX (CD11c), or to other invertebrate blood cell protein, peroxinectin, is not only integrins. Native myeloperoxidase mediated dose- a peroxidase but also a cell adhesion ligand. We demon- dependent cell adhesion down to relatively low concen- strate in this study that human myeloperoxidase also trations, and denaturation abolished the adhesion mediates cell adhesion. Both the human myeloid cell line activity. It is evident that myeloperoxidase supports cell HL-60, when differentiated by treatment with 12-O- adhesion, a function which may be of considerable tetradecanoyl-phorbol-13-acetate (TPA) or retinoic acid, importance for leukocyte migration and infiltration in and human blood leukocytes, adhered to myeloperoxi- inflammatory reactions, that αMβ2 integrin (Mac-1 or dase; however, undifferentiated HL-60 cells showed only CD11b/CD18) mediates this adhesion, and that the αMβ2 minimal adhesion. -
Francisella Tularensis 6/06 Tularemia Is a Commonly Acquired Laboratory Colony Morphology Infection; All Work on Suspect F
Francisella tularensis 6/06 Tularemia is a commonly acquired laboratory Colony Morphology infection; all work on suspect F. tularensis cultures .Aerobic, fastidious, requires cysteine for growth should be performed at minimum under BSL2 .Grows poorly on Blood Agar (BA) conditions with BSL3 practices. .Chocolate Agar (CA): tiny, grey-white, opaque A colonies, 1-2 mm ≥48hr B .Cysteine Heart Agar (CHA): greenish-blue colonies, 2-4 mm ≥48h .Colonies are butyrous and smooth Gram Stain .Tiny, 0.2–0.7 μm pleomorphic, poorly stained gram-negative coccobacilli .Mostly single cells Growth on BA (A) 48 h, (B) 72 h Biochemical/Test Reactions .Oxidase: Negative A B .Catalase: Weak positive .Urease: Negative Additional Information .Can be misidentified as: Haemophilus influenzae, Actinobacillus spp. by automated ID systems .Infective Dose: 10 colony forming units Biosafety Level 3 agent (once Francisella tularensis is . Growth on CA (A) 48 h, (B) 72 h suspected, work should only be done in a certified Class II Biosafety Cabinet) .Transmission: Inhalation, insect bite, contact with tissues or bodily fluids of infected animals .Contagious: No Acceptable Specimen Types .Tissue biopsy .Whole blood: 5-10 ml blood in EDTA, and/or Inoculated blood culture bottle Swab of lesion in transport media . Gram stain Sentinel Laboratory Rule-Out of Francisella tularensis Oxidase Little to no growth on BA >48 h Small, grey-white opaque colonies on CA after ≥48 h at 35/37ºC Positive Weak Negative Positive Catalase Tiny, pleomorphic, faintly stained, gram-negative coccobacilli (red, round, and random) Perform all additional work in a certified Class II Positive Biosafety Cabinet Weak Negative Positive *Oxidase: Negative Urease *Catalase: Weak positive *Urease: Negative *Oxidase, Catalase, and Urease: Appearances of test results are not agent-specific. -
ARS-2014-6136-Ver9-Huang 6P 973..984
ANTIOXIDANTS & REDOX SIGNALING Volume 23, Number 12, 2015 DOI: 10.1089/ars.2014.6136 ORIGINAL RESEARCH COMMUNICATION Redox Regulation of Pro-IL-1b Processing May Contribute to the Increased Severity of Serum-Induced Arthritis in NOX2-Deficient Mice Ya-Fang Huang,1 Pei-Chi Lo,1 Chia-Liang Yen,2 Peter Andrija Nigrovic,3,4 Wen-Chen Chao,1,5 Wei-Zhi Wang,1 George Chengkang Hsu,1 Yau-Sheng Tsai,1 and Chi-Chang Shieh1,6 Abstract Aims: To elucidate the role of reactive oxygen species (ROS) in arthritis and to identify targets of arthritis treatment in conditions with different levels of oxidant stress. Results: Through establishing an arthritis model by injecting arthritogenic serum into wild-type and NADPH oxidase 2 (NOX2)-deficient mice, we found that arthritis had a neutrophilic infiltrate and was more severe in Ncf1 - / - mice, a mouse strain lacking the expression of the NCF1/p47phox component of NOX2. The levels of interleukin-1b (IL-1b) and IL-6 in inflamed joints were higher in Ncf1 - / - than in controls. Antagonists of tumor necrosis factor-a (TNFa) and IL-1b were equally effective in suppressing arthritis in wild-type mice, while IL-1b blockade was more effective than TNFa blockade in Ncf1 - / - mice. A treatment of caspase inhibitor and the combination treatment of a caspase inhibitor and a cathepsin inhibitor, but not a cathepsin inhibitor alone, suppressed arthritic severity in the wild-type mice, while a treatment of cathepsin inhibitor and the combination treatment of a caspase inhibitor and a cathepsin inhibitor, but not a caspase inhibitor alone, were effective in treating Ncf1 - / - mice. -
Cytochrome P450 Enzymes but Not NADPH Oxidases Are the Source of the MARK NADPH-Dependent Lucigenin Chemiluminescence in Membrane Assays
Free Radical Biology and Medicine 102 (2017) 57–66 Contents lists available at ScienceDirect Free Radical Biology and Medicine journal homepage: www.elsevier.com/locate/freeradbiomed Cytochrome P450 enzymes but not NADPH oxidases are the source of the MARK NADPH-dependent lucigenin chemiluminescence in membrane assays Flávia Rezendea, Kim-Kristin Priora, Oliver Löwea, Ilka Wittigb, Valentina Streckerb, Franziska Molla, Valeska Helfingera, Frank Schnütgenc, Nina Kurrlec, Frank Wempec, Maria Waltera, Sven Zukunftd, Bert Luckd, Ingrid Flemingd, Norbert Weissmanne, ⁎ ⁎ Ralf P. Brandesa, , Katrin Schrödera, a Institute for Cardiovascular Physiology, Goethe-University, Frankfurt, Germany b Functional Proteomics, SFB 815 Core Unit, Goethe-Universität, Frankfurt, Germany c Institute for Molecular Hematology, Goethe-University, Frankfurt, Germany d Institute for Vascular Signaling, Goethe-University, Frankfurt, Germany e University of Giessen, Lung Center, Giessen, Germany ARTICLE INFO ABSTRACT Keywords: Measuring NADPH oxidase (Nox)-derived reactive oxygen species (ROS) in living tissues and cells is a constant NADPH oxidase challenge. All probes available display limitations regarding sensitivity, specificity or demand highly specialized Nox detection techniques. In search for a presumably easy, versatile, sensitive and specific technique, numerous Lucigenin studies have used NADPH-stimulated assays in membrane fractions which have been suggested to reflect Nox Chemiluminescence activity. However, we previously found an unaltered activity with these assays in triple Nox knockout mouse Superoxide (Nox1-Nox2-Nox4-/-) tissue and cells compared to wild type. Moreover, the high ROS production of intact cells Reactive oxygen species Membrane assays overexpressing Nox enzymes could not be recapitulated in NADPH-stimulated membrane assays. Thus, the signal obtained in these assays has to derive from a source other than NADPH oxidases. -
Peroxisomal Disorders and Their Mouse Models Point to Essential Roles of Peroxisomes for Retinal Integrity
International Journal of Molecular Sciences Review Peroxisomal Disorders and Their Mouse Models Point to Essential Roles of Peroxisomes for Retinal Integrity Yannick Das, Daniëlle Swinkels and Myriam Baes * Lab of Cell Metabolism, Department of Pharmaceutical and Pharmacological Sciences, KU Leuven, 3000 Leuven, Belgium; [email protected] (Y.D.); [email protected] (D.S.) * Correspondence: [email protected] Abstract: Peroxisomes are multifunctional organelles, well known for their role in cellular lipid homeostasis. Their importance is highlighted by the life-threatening diseases caused by peroxisomal dysfunction. Importantly, most patients suffering from peroxisomal biogenesis disorders, even those with a milder disease course, present with a number of ocular symptoms, including retinopathy. Patients with a selective defect in either peroxisomal α- or β-oxidation or ether lipid synthesis also suffer from vision problems. In this review, we thoroughly discuss the ophthalmological pathology in peroxisomal disorder patients and, where possible, the corresponding animal models, with a special emphasis on the retina. In addition, we attempt to link the observed retinal phenotype to the underlying biochemical alterations. It appears that the retinal pathology is highly variable and the lack of histopathological descriptions in patients hampers the translation of the findings in the mouse models. Furthermore, it becomes clear that there are still large gaps in the current knowledge on the contribution of the different metabolic disturbances to the retinopathy, but branched chain fatty acid accumulation and impaired retinal PUFA homeostasis are likely important factors. Citation: Das, Y.; Swinkels, D.; Baes, Keywords: peroxisome; Zellweger; metabolism; fatty acid; retina M. Peroxisomal Disorders and Their Mouse Models Point to Essential Roles of Peroxisomes for Retinal Integrity. -
Kinetic Approaches to Measuring Peroxiredoxin Reactivity
Mol. Cells 2016; 39(1): 26-30 http://dx.doi.org/10.14348/molcells.2016.2325 Molecules and Cells http://molcells.org Established in 1990 Kinetic Approaches to Measuring Peroxiredoxin Reactivity Christine C. Winterbourn*, and Alexander V. Peskin Peroxiredoxins are ubiquitous thiol proteins that catalyse demonstrated surprisingly low reactivity with thiol reagents such the breakdown of peroxides and regulate redox activity in as iodoacetamide and other oxidants such as chloramines the cell. Kinetic analysis of their reactions is required in (Peskin et al., 2007) and it is clear that the low pKa of the active order to identify substrate preferences, to understand how site thiol is insufficient to confer the high peroxide reactivity. In molecular structure affects activity and to establish their fact, typical low molecular weight and protein thiolates react -1 -1 physiological functions. Various approaches can be taken, with H2O2 with a rate constant of 20 M s whereas values of including the measurement of rates of individual steps in Prxs are 105-106 fold higher (Winterbourn and Hampton, 2008). the reaction pathway by stopped flow or competitive kinet- An elegant series of structural and mutational studies (Hall et al., ics, classical enzymatic analysis and measurement of pe- 2010; Nakamura et al., 2010; Nagy et al., 2011) have shown roxidase activity. Each methodology has its strengths and that to get sufficient rate enhancement, it is necessary to acti- they can often give complementary information. However, vate the peroxide. As discussed in detail elsewhere (Hall et al., it is important to understand the experimental conditions 2010; 2011), this involves formation of a transition state in of the assay so as to interpret correctly what parameter is which hydrogen bonding of the peroxide to conserved Arg and being measured. -
Understanding the Structure and Function of Catalases: Clues from Molecular Evolution and in Vitro Mutagenesis
PERGAMON Progress in Biophysics & Molecular Biology 72 (1999) 19±66 Understanding the structure and function of catalases: clues from molecular evolution and in vitro mutagenesis Marcel Za mocky *, Franz Koller Institut fuÈr Biochemie and Molekulare Zellbiologie and Ludwig Boltzmann Forschungsstelle fuÈr Biochemie, Vienna Biocenter, Dr. Bohr-Gasse 9, A-1030 Wien, Austria Abstract This review gives an overview about the structural organisation of dierent evolutionary lines of all enzymes capable of ecient dismutation of hydrogen peroxide. Major potential applications in biotechnology and clinical medicine justify further investigations. According to structural and functional similarities catalases can be divided in three subgroups. Typical catalases are homotetrameric haem proteins. The three-dimensional structure of six representatives has been resolved to atomic resolution. The central core of each subunit reveals a chracteristic ``catalase fold'', extremely well conserved among this group. In the native tetramer structure pairs of subunits tightly interact via exchange of their N- terminal arms. This pseudo-knot structures implies a highly ordered assembly pathway. A minor subgroup (``large catalases'') possesses an extra ¯avodoxin-like C-terminal domain. A r25AÊ long channel leads from the enzyme surface to the deeply buried active site. It enables rapid and selective diusion of the substrates to the active center. In several catalases NADPH is tightly bound close to the surface. This cofactor may prevent and reverse the formation of compound II, an inactive reaction intermediate. Bifunctional catalase-peroxidases are haem proteins which probably arose via gene duplication of an ancestral peroxidase gene. No detailed structural information is currently available. Even less is know about manganese catalases. -
Protein Engineering of a Dye Decolorizing Peroxidase from Pleurotus Ostreatus for Efficient Lignocellulose Degradation
Protein Engineering of a Dye Decolorizing Peroxidase from Pleurotus ostreatus For Efficient Lignocellulose Degradation Abdulrahman Hirab Ali Alessa A thesis submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy The University of Sheffield Faculty of Engineering Department of Chemical and Biological Engineering September 2018 ACKNOWLEDGEMENTS Firstly, I would like to express my profound gratitude to my parents, my wife, my sisters and brothers, for their continuous support and their unconditional love, without whom this would not be achieved. My thanks go to Tabuk University for sponsoring my PhD project. I would like to express my profound gratitude to Dr Wong for giving me the chance to undertake and complete my PhD project in his lab. Thank you for the continuous support and guidance throughout the past four years. I would also like to thank Dr Tee for invaluable scientific discussions and technical advices. Special thanks go to the former and current students in Wong’s research group without whom these four years would not be so special and exciting, Dr Pawel; Dr Hossam; Dr Zaki; Dr David Gonzales; Dr Inas,; Dr Yomi, Dr Miriam; Jose; Valeriane, Melvin, and Robert. ii SUMMARY Dye decolorizing peroxidases (DyPs) have received extensive attention due to their biotechnological importance and potential use in the biological treatment of lignocellulosic biomass. DyPs are haem-containing peroxidases which utilize hydrogen peroxide (H2O2) to catalyse the oxidation of a wide range of substrates. Similar to naturally occurring peroxidases, DyPs are not optimized for industrial utilization owing to their inactivation induced by excess amounts of H2O2. -
The Relationship of NADPH Oxidases and Heme Peroxidases: Fallin' In
MINI REVIEW published: 05 March 2019 doi: 10.3389/fimmu.2019.00394 The Relationship of NADPH Oxidases and Heme Peroxidases: Fallin’ in and Out Gábor Sirokmány 1,2* and Miklós Geiszt 1,2* 1 Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary, 2 “Momentum” Peroxidase Enzyme Research Group of the Semmelweis University and the Hungarian Academy of Sciences, Budapest, Hungary Peroxidase enzymes can oxidize a multitude of substrates in diverse biological processes. According to the latest phylogenetic analysis, there are four major heme peroxidase superfamilies. In this review, we focus on certain members of the cyclooxygenase-peroxidase superfamily (also labeled as animal heme peroxidases) and their connection to specific NADPH oxidase enzymes which provide H2O2 for the Edited by: Gabor Csanyi, one- and two-electron oxidation of various peroxidase substrates. The family of NADPH Augusta University, United States oxidases is a group of enzymes dedicated to the production of superoxide and hydrogen Reviewed by: peroxide. There is a handful of known and important physiological functions where Tohru Fukai, Augusta University, United States one of the seven known human NADPH oxidases plays an essential role. In most of Patrick Pagano, these functions NADPH oxidases provide H2O2 for specific heme peroxidases and University of Pittsburgh, United States the concerted action of the two enzymes is indispensable for the accomplishment *Correspondence: of the biological function. We discuss human and other metazoan examples of such Gábor Sirokmány sirokmany.gabor@ cooperation between oxidases and peroxidases and analyze the biological importance med.semmelweis-univ.hu of their functional interaction. We also review those oxidases and peroxidases where this Miklós Geiszt geiszt.miklos@ kind of partnership has not been identified yet. -
Role of NADPH Oxidase in Arsenic-Induced Reactive Oxygen Species Formation and Cytotoxicity in Myeloid Leukemia Cells
Role of NADPH oxidase in arsenic-induced reactive oxygen species formation and cytotoxicity in myeloid leukemia cells Wen-Chien Chou*†‡, Chunfa Jie§, Andrew A. Kenedy¶, Richard J. Jonesʈ, Michael A. Trush¶, and Chi V. Dang*†¶ʈ** *Program of Human Genetics and Molecular Biology, †Department of Medicine, §McKusick–Nathans Institute of Genetic Medicine, and ʈSidney Kimmel Comprehensive Cancer Center, School of Medicine, ¶Department of Environmental Health Sciences, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205 Edited by Owen N. Witte, University of California, Los Angeles, CA, and approved January 21, 2004 (received for review October 16, 2003) Arsenic has played a key medicinal role against a variety of associated and cytosolic subunits, can be stimulated by phorbol ailments for several millennia, but during the past century its myristate acetate (PMA) through protein kinase C-mediated prominence has been displaced by modern therapeutics. Recently, phosphorylation of the p47PHOX subunit (17, 18). This complex attention has been drawn to arsenic by its dramatic clinical efficacy is responsible for the production of superoxide anion (respira- against acute promyelocytic leukemia. Although toxic reactive tory burst) of professional phagocytes encountering microbial oxygen species (ROS) induced in cancer cells exposed to arsenic pathogens, and its importance in host immunity is underscored could mediate cancer cell death, how arsenic induces ROS remains by the immunocompromised congenital disease, chronic gran- undefined. Through the use of gene expression profiling, interfer- ulomatous disease (CGD), which results from mutations in one ence RNA, and genetically engineered cells, we report here that of the subunits of NADPH oxidase (19, 20). -
Respiration Triggers Heme Transfer from Cytochrome C Peroxidase to Catalase in Yeast Mitochondria
Respiration triggers heme transfer from cytochrome c peroxidase to catalase in yeast mitochondria Meena Kathiresan, Dorival Martins, and Ann M. English1 Quebec Network for Research on Protein Function, Structure, and Engineering and Department of Chemistry and Biochemistry, Concordia University, Montreal, QC, Canada, H4B 1R6 Edited by Harry B. Gray, California Institute of Technology, Pasadena, CA, and approved October 14, 2014 (received for review May 24, 2014) In exponentially growing yeast, the heme enzyme, cytochrome c per- Because Ccp1 production is not under O2/heme control (4, 5), oxidase (Ccp1) is targeted to the mitochondrial intermembrane space. CCP activity is assumed to be the frontline defense in the mito- When the fermentable source (glucose) is depleted, cells switch to chondria, a major source of reactive oxygen species (ROS) in respiration and mitochondrial H2O2 levels rise. It has long been as- respiring cells (7). Contrary to the time-honored assumption that sumed that CCP activity detoxifies mitochondrial H2O2 because of the Ccp1 catalytically consumes the H2O2 produced during aerobic efficiency of this activity in vitro. However, we find that a large pool respiration (8), recent studies in our group reveal that the per- of Ccp1 exits the mitochondria of respiring cells. We detect no extra- oxidase behaves more like a mitochondrial H2O2 sensor than mitochondrial CCP activity because Ccp1 crosses the outer mitochon- a catalytic H2O2 detoxifier (9–11). Notably, Ccp1 competes with drial membrane as the heme-free protein. In parallel with apoCcp1 complex IV for reducing equivalents from Cyc1, which shuttles export, cells exhibit increased activity of catalase A (Cta1), the mito- electrons from complex III (ubiquinol cytochrome c reductase) chondrial and peroxisomal catalase isoform in yeast.