Red Tides & Harmful Algal Blooms
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Suitability of Great South Bay, New York to Blooms of Pfiesteria Piscicida and P
City University of New York (CUNY) CUNY Academic Works School of Arts & Sciences Theses Hunter College Summer 8-10-2015 Suitability of Great South Bay, New York to Blooms of Pfiesteria piscicida and P. shumwayae Prior to Superstorm Sandy, October 29, 2012 Pawel Tomasz Zablocki CUNY Hunter College How does access to this work benefit ou?y Let us know! More information about this work at: https://academicworks.cuny.edu/hc_sas_etds/6 Discover additional works at: https://academicworks.cuny.edu This work is made publicly available by the City University of New York (CUNY). Contact: [email protected] Suitability of Great South Bay, New York, to Blooms of Pfiesteria piscicida and P. shumwayae Prior to Superstorm Sandy, October 29, 2012. By Pawel Zablocki Submitted in partial fulfillment of the requirements for the degree of Master of Arts Hunter College of the City of New York 2015 Thesis sponsor: __25 July 2015 Peter X. Marcotullio Date First Reader _2 August 2015 Karl H. Szekielda Date Second Reader i Acknowledgements I would like to thank my advisor, Professor H. Gong and two of my excellent readers—Professor Peter Marcotullio and Professor Karl Szekielda who provided their invaluable advice, alleviated my concerns, and weathered the avalanche of my questions. ii Abstract of the Thesis Pfiesteria piscicida and P. shumwayae are toxic dinoflagellates implicated in massive fish kills in North Carolina and Maryland during 1990s. A set of physical, chemical, and biological factors influence population dynamics of these organisms. This study employs information gathered from relevant literature on temperature, salinity, dissolved oxygen, pH, turbulent mixing, and dissolved nutrients, bacteria, algae, microzooplankton, mesozooplankton, bivalve mollusks, finfish, and other toxic dinoflagellates, which influence Pfiesteria population dynamics. -
The Planktonic Protist Interactome: Where Do We Stand After a Century of Research?
bioRxiv preprint doi: https://doi.org/10.1101/587352; this version posted May 2, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Bjorbækmo et al., 23.03.2019 – preprint copy - BioRxiv The planktonic protist interactome: where do we stand after a century of research? Marit F. Markussen Bjorbækmo1*, Andreas Evenstad1* and Line Lieblein Røsæg1*, Anders K. Krabberød1**, and Ramiro Logares2,1** 1 University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N- 0316 Oslo, Norway 2 Institut de Ciències del Mar (CSIC), Passeig Marítim de la Barceloneta, 37-49, ES-08003, Barcelona, Catalonia, Spain * The three authors contributed equally ** Corresponding authors: Ramiro Logares: Institute of Marine Sciences (ICM-CSIC), Passeig Marítim de la Barceloneta 37-49, 08003, Barcelona, Catalonia, Spain. Phone: 34-93-2309500; Fax: 34-93-2309555. [email protected] Anders K. Krabberød: University of Oslo, Department of Biosciences, Section for Genetics and Evolutionary Biology (Evogene), Blindernv. 31, N-0316 Oslo, Norway. Phone +47 22845986, Fax: +47 22854726. [email protected] Abstract Microbial interactions are crucial for Earth ecosystem function, yet our knowledge about them is limited and has so far mainly existed as scattered records. Here, we have surveyed the literature involving planktonic protist interactions and gathered the information in a manually curated Protist Interaction DAtabase (PIDA). In total, we have registered ~2,500 ecological interactions from ~500 publications, spanning the last 150 years. -
Development of a Quantitative PCR Assay for the Detection And
bioRxiv preprint doi: https://doi.org/10.1101/544247; this version posted February 8, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Development of a quantitative PCR assay for the detection and enumeration of a potentially ciguatoxin-producing dinoflagellate, Gambierdiscus lapillus (Gonyaulacales, Dinophyceae). Key words:Ciguatera fish poisoning, Gambierdiscus lapillus, Quantitative PCR assay, Great Barrier Reef Kretzschmar, A.L.1,2, Verma, A.1, Kohli, G.S.1,3, Murray, S.A.1 1Climate Change Cluster (C3), University of Technology Sydney, Ultimo, 2007 NSW, Australia 2ithree institute (i3), University of Technology Sydney, Ultimo, 2007 NSW, Australia, [email protected] 3Alfred Wegener-Institut Helmholtz-Zentrum fr Polar- und Meeresforschung, Am Handelshafen 12, 27570, Bremerhaven, Germany Abstract Ciguatera fish poisoning is an illness contracted through the ingestion of seafood containing ciguatoxins. It is prevalent in tropical regions worldwide, including in Australia. Ciguatoxins are produced by some species of Gambierdiscus. Therefore, screening of Gambierdiscus species identification through quantitative PCR (qPCR), along with the determination of species toxicity, can be useful in monitoring potential ciguatera risk in these regions. In Australia, the identity, distribution and abundance of ciguatoxin producing Gambierdiscus spp. is largely unknown. In this study we developed a rapid qPCR assay to quantify the presence and abundance of Gambierdiscus lapillus, a likely ciguatoxic species. We assessed the specificity and efficiency of the qPCR assay. The assay was tested on 25 environmental samples from the Heron Island reef in the southern Great Barrier Reef, a ciguatera endemic region, in triplicate to determine the presence and patchiness of these species across samples from Chnoospora sp., Padina sp. -
Save the Reef
Save the Reef A member group of Lock the Gate Alliance www.savethereef.net.au Committee Secretary Senate Standing Committees on Environment and Communications PO Box 6100 Parliament House Canberra ACT 2600 Phone: +61 2 6277 3526 Fax: +61 2 6277 5818 [email protected] Submission to the Senate Inquiry on The adequacy of the Australian and Queensland Governments’ efforts to stop the rapid decline of the Great Barrier Reef, including but not limited to: Points a–k. Save the Reef would like to thank this committee for the opportunity to make a submission and would also like to speak further if there is an opportunity at any public hearings. The Great Barrier Reef is Australia’s greatest natural asset. It is a tourism mecca, a 6 billion dollar economic boon as well as a scientific wonderland. It is a World Heritage Listed property and an acknowledged world wonder. The Great Barrier Reef is part of Australia’s very identity. We are failing to protect the Great Barrier Reef. The efforts to stop the rapid decline of the Great Barrier Reef are grossly inadequate. It demonstrates that our current system for protecting the environment is broken. Environmental impact statements, conditions, offsets, regulations, enforcement and even the EPBC act, processes meant to protect the environment are being subverted and the impact is apparent. The holes in the “Swiss Cheese” are lining up and have allowed and are continuing to allow further destruction of the Great Barrier Reef when it needs our protection the most. The recent developments in Gladstone are a clear demonstration of the failure of our systems. -
The Florida Red Tide Dinoflagellate Karenia Brevis
G Model HARALG-488; No of Pages 11 Harmful Algae xxx (2009) xxx–xxx Contents lists available at ScienceDirect Harmful Algae journal homepage: www.elsevier.com/locate/hal Review The Florida red tide dinoflagellate Karenia brevis: New insights into cellular and molecular processes underlying bloom dynamics Frances M. Van Dolah a,*, Kristy B. Lidie a, Emily A. Monroe a, Debashish Bhattacharya b, Lisa Campbell c, Gregory J. Doucette a, Daniel Kamykowski d a Marine Biotoxins Program, NOAA Center for Coastal Environmental Health and Biomolecular Resarch, Charleston, SC, United States b Department of Biological Sciences and Roy J. Carver Center for Comparative Genomics, University of Iowa, Iowa City, IA, United States c Department of Oceanography, Texas A&M University, College Station, TX, United States d Department of Marine, Earth and Atmospheric Sciences, North Carolina State University, Raleigh, NC, United States ARTICLE INFO ABSTRACT Article history: The dinoflagellate Karenia brevis is responsible for nearly annual red tides in the Gulf of Mexico that Available online xxx cause extensive marine mortalities and human illness due to the production of brevetoxins. Although the mechanisms regulating its bloom dynamics and toxicity have received considerable attention, Keywords: investigation into these processes at the cellular and molecular level has only begun in earnest during Bacterial–algal interactions the past decade. This review provides an overview of the recent advances in our understanding of the Cell cycle cellular and molecular biology on K. brevis. Several molecular resources developed for K. brevis, including Dinoflagellate cDNA and genomic DNA libraries, DNA microarrays, metagenomic libraries, and probes for population Florida red tide genetics, have revolutionized our ability to investigate fundamental questions about K. -
Evidence Against Production of Ichthyotoxins by Pfiesteria Shumwayae
Are Pfiesteria species toxicogenic? Evidence against production of ichthyotoxins by Pfiesteria shumwayae J. P. Berry*, K. S. Reece†, K. S. Rein‡, D. G. Baden§, L. W. Haas†, W. L. Ribeiro†, J. D. Shields†, R. V. Snyder‡, W. K. Vogelbein†, and R. E. Gawley*¶ *Department of Chemistry͞National Institute of Environmental Health Sciences, Marine and Freshwater Biomedical Science Center, University of Miami, P.O. Box 249118, Coral Gables, FL 33124; †Virginia Institute of Marine Science, College of William and Mary, Route 1208, Gloucester Point, VA 23062; ‡Department of Chemistry, Florida International University, 11200 SW 8th Street, Miami, FL 33199; and §Center for Marine Science, University of North Carolina, 5600 Marvin K. Moss Lane, Wilmington, NC 28409 Edited by John H. Law, University of Arizona, Tucson, AZ, and approved May 29, 2002 (received for review April 12, 2002) The estuarine genus Pfiesteria has received considerable attention Materials and Methods since it was first identified and proposed to be the causative agent Dinoflagellate Cultures. A clonal isolate of Pfiesteria shumwayae of fish kills along the mid-Atlantic coast in 1992. The presumption [Center for Culture of Marine Phytoplankton (CCMP) 2089] was has been that the mechanism of fish death is by release of one or maintained in cultures as described below. The identity of more toxins by the dinoflagellate. In this report, we challenge the P. shumwayae was confirmed additionally by PCR using notion that Pfiesteria species produce ichthyotoxins. Specifically, species-specific primers for regions of the ribosomal RNA we show that (i) simple centrifugation, with and without ultra- gene complex (29). sonication, is sufficient to ‘‘detoxify’’ water of actively fish-killing Algal prey. -
Assessing the Potential for Range Expansion of the Red Tide Algae Karenia Brevis
Nova Southeastern University NSUWorks All HCAS Student Capstones, Theses, and Dissertations HCAS Student Theses and Dissertations 8-7-2020 Assessing the Potential for Range Expansion of the Red Tide Algae Karenia brevis Edward W. Young Follow this and additional works at: https://nsuworks.nova.edu/hcas_etd_all Part of the Marine Biology Commons Share Feedback About This Item NSUWorks Citation Edward W. Young. 2020. Assessing the Potential for Range Expansion of the Red Tide Algae Karenia brevis. Capstone. Nova Southeastern University. Retrieved from NSUWorks, . (13) https://nsuworks.nova.edu/hcas_etd_all/13. This Capstone is brought to you by the HCAS Student Theses and Dissertations at NSUWorks. It has been accepted for inclusion in All HCAS Student Capstones, Theses, and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Capstone of Edward W. Young Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science Marine Science Nova Southeastern University Halmos College of Arts and Sciences August 2020 Approved: Capstone Committee Major Professor: D. Abigail Renegar, Ph.D. Committee Member: Robert Smith, Ph.D. This capstone is available at NSUWorks: https://nsuworks.nova.edu/hcas_etd_all/13 Nova Southeastern Univeristy Halmos College of Arts and Sciences Assessing the Potential for Range Expansion of the Red Tide Algae Karenia brevis By Edward William Young Submitted to the Faculty of Halmos College of Arts and Sciences in partial fulfillment of the requirements for the degree of Masters of Science with a specialty in: Marine Biology Nova Southeastern University September 8th, 2020 1 Table of Contents 1. -
Sample Chapter Algal Blooms
ALGAL BLOOMS 7 Observations and Remote Sensing. http://dx.doi.org/10.1109/ energy and material transport through the food web, and JSTARS.2013.2265255. they also play an important role in the vertical flux of Pack, R. T., Brooks, V., Young, J., Vilaca, N., Vatslid, S., Rindle, P., material out of the surface waters. These blooms are Kurz, S., Parrish, C. E., Craig, R., and Smith, P. W., 2012. An “ ” overview of ALS technology. In Renslow, M. S. (ed.), Manual distinguished from those that are deemed harmful. of Airborne Topographic Lidar. Bethesda: ASPRS Press. Algae form harmful algal blooms, or HABs, when either Sithole, G., and Vosselman, G., 2004. Experimental comparison of they accumulate in massive amounts that alone cause filter algorithms for bare-Earth extraction from airborne laser harm to the ecosystem or the composition of the algal scanning point clouds. ISPRS Journal of Photogrammetry and community shifts to species that make compounds Remote Sensing, 59,85–101. (including toxins) that disrupt the normal food web or to Shan, J., and Toth, C., 2009. Topographic Laser Ranging and Scanning: Principles and Processes. Boca Raton: CRC Press. species that can harm human consumers (Glibert and Slatton, K. C., Carter, W. E., Shrestha, R. L., and Dietrich, W., 2007. Pitcher, 2001). HABs are a broad and pervasive problem, Airborne laser swath mapping: achieving the resolution and affecting estuaries, coasts, and freshwaters throughout the accuracy required for geosurficial research. Geophysical world, with effects on ecosystems and human health, and Research Letters, 34,1–5. on economies, when these events occur. This entry Wehr, A., and Lohr, U., 1999. -
CH28 PROTISTS.Pptx
9/29/14 Biosc 41 Announcements 9/29 Review: History of Life v Quick review followed by lecture quiz (history & v How long ago is Earth thought to have formed? phylogeny) v What is thought to have been the first genetic material? v Lecture: Protists v Are we tetrapods? v Lab: Protozoa (animal-like protists) v Most atmospheric oxygen comes from photosynthesis v Lab exam 1 is Wed! (does not cover today’s lab) § Since many of the first organisms were photosynthetic (i.e. cyanobacteria), a LOT of excess oxygen accumulated (O2 revolution) § Some organisms adapted to use it (aerobic respiration) Review: History of Life Review: Phylogeny v Which organelles are thought to have originated as v Homology is similarity due to shared ancestry endosymbionts? v Analogy is similarity due to convergent evolution v During what event did fossils resembling modern taxa suddenly appear en masse? v A valid clade is monophyletic, meaning it consists of the ancestor taxon and all its descendants v How many mass extinctions seem to have occurred during v A paraphyletic grouping consists of an ancestral species and Earth’s history? Describe one? some, but not all, of the descendants v When is adaptive radiation likely to occur? v A polyphyletic grouping includes distantly related species but does not include their most recent common ancestor v Maximum parsimony assumes the tree requiring the fewest evolutionary events is most likely Quiz 3 (History and Phylogeny) BIOSC 041 1. How long ago is Earth thought to have formed? 2. Why might many organisms have evolved to use aerobic respiration? PROTISTS! Reference: Chapter 28 3. -
Wednesday Update Marine Lab Monitoring Red Tide Around Islands
Wednesday Update January 13, 2021 Welcome to the first 2021 edition of the Wednesday Update! We'll email the next issue on Jan. 27. By highlighting SCCF's mission to protect and care for Southwest Florida's coastal ecosystems, our updates connect you to nature. Thanks to Frances Tutt for this photo of American white pelicans (Pelecanus erythrorhynchos) feeding. DO YOU HAVE WILDLIFE PHOTOS TO SHARE? Please send your photos to [email protected] to be featured in an upcoming issue. Marine Lab Monitoring Red Tide Around Islands Today's daily sampling map from the Florida Fish and Wildlife Conservation Commission (FWC), pictured here, shows that a patchy bloom of the red tide organism, Karenia brevis, persists in Southwest Florida based on sampling conducted over the past eight days. This afternoon's mid-week update reported that background to high concentrations of K. brevis were detected in 42 samples over the past week. Medium bloom concentrations (>100,000 cells/liter) were observed in 32 samples collected from Lee and Collier counties, according to the FWC. As indicated by the dots on this map, background to high concentrations were recorded in Lee County in 24 samples, and medium to high concentrations in and offshore of Collier County were observed in 17 samples. Daily samples collected by SCCF's Marine Lab and Sanibel Sea School at local beaches and back bay waters have ranged from high concentrations (>1 million K. brevis cells/liter) to low (>10,000 cells/liter). "Today we counted low levels mid-island on Sanibel and a high level at the Lighthouse," said SCCF Research Scientist Rick Bartleson. -
Subsurface Dinoflagellate Populations, Frontal Blooms and the Formation of Red Tide in the Southern Benguela Upwelling System
MARINE ECOLOGY PROGRESS SERIES Vol. 172: 253-264. 1998 Published October 22 Mar Ecol Prog Ser Subsurface dinoflagellate populations, frontal blooms and the formation of red tide in the southern Benguela upwelling system G. C. Pitcher*,A. J. Boyd, D. A. Horstman, B. A. Mitchell-Innes Sea Fisheries Research Institute, Private Bag X2, Rogge Bay 8012, Cape Town. South Africa ABSTRACT- The West Coast of South Africa is often subjected to problems associated with red tides which are usually attributed to blooms of migratory dinoflagellates. This study investigates the cou- pling between the physical environment and the biological behaviour and physiological adaptation of dinoflagellates in an attempt to understand bloom development, maintenance and decline. Widespread and persistent subsurface dinoflagellate populations domlnate the stratified waters of the southern Benguela during the latter part of the upwelling season. Chlorophyll concentrations as high as 50 mg m-3 are associated with the the]-mocline at approximately 20 m depth but photosynthesis in this region is restricted by low light. The subsurface population is brought to the surface in the region of the upwelling front. Here increased light levels are responsible for enhanced production, in some instances exceeding 80 mgC rn.' h ', and resulting in dense dinoflagellate concentrations in and around the uplifted thermocline. Under particular wind and current conditions these frontal bloon~sare trans- ported and accumulated inshore and red tides are formed. KEY WORDS: Dinoflagellates Subsurface populations . Frontal bloolns Red tide - Upwelling systems INTRODUCTION Pitcher 1996), or from physical damage, such as the clogging of fish gills (Grindley & Nel 1968, Brown et al. -
Waterborne Pathogens in Agricultural Watersheds
United States Department of Waterborne Pathogens in Agriculture Natural Resources Agricultural Watersheds Conservation Service Watershed Science by Barry H. Rosen Institute NRCS, Watershed Science Institute School of Natural Resources University of Vermont, Burlington Contents Introduction ..................................................... 1 Pathogens of concern ..................................... 3 Pathogens in the environment .....................22 Control methods............................................ 33 Monitoring and evaluation ........................... 43 Anticipated developments ........................... 47 Summary ........................................................ 48 Glossary .......................................................... 49 References...................................................... 52 With contributions by Richard Croft, Natural Resources Conservation Service (retired) Edward R. Atwill, D.V.M., Ph.D., School of Veterinary Medicine, University of California-Davis, 18830 Road 112, Tulare, California Susan Stehman, V.M.D., Senior Extension Veterinarian, New York State Diagnostic Laboratory, College of Veterinary Medicine, Cornell University, Ithaca, New York Susan Wade, Ph.D., Director Parasitology Laboratory, New York State Diagnostic Laboratory, College of Veterinary Medicine, Cornell University, Ithaca, New York Issued June 2000 The United States Department of Agriculture (USDA) prohibits discrimi- nation in all its programs and activities on the basis of race, color, na- tional origin, gender,