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Genotypic Variation in Rough-Seeded Lupins (Lupinus Pilosus Murr. and L. Atlanticus Glads.)
A.L, I,T Genotypic variation in rough-seeded a (Lupinus pilosrrs Murr. and L. øtlønticas Glads.) for tolerance to calcareous soils Jason David Brand B.Ag.Sc. (Hons.), University of Adelaide Thesis submitted for the degree of Doctor of Philosophy Department of Plant Science Waite Campus, University of Adelaide Glen Osmond, South Australia December, 1999 This thesis is dedicated to the loving memory of my mother Julie Ann Brand 1" July 1951 - 9tr' January 1999 'Serenity' In God's care Flate L Lupinus pilosus in the field, the plant and the flower. i:l I Table of Contents PAGE Abstract vl Declaration viii Acknowledgements ix Publications xi Chapter I - General introduction I Chapter 2 -Literature review 3 2.1 Lupins Ja 2.1.1 Species and distribution (Taxonomy) J 2.l.2Morphology 4 2.1.3 Lupins in agriculture 6 2.1.4 Diseases and pathogens of lupins 10 Fungal Viral Nematodes Insects 2.1.5 Seed composition and products of lupins l1 Seed composition Animal feed Human consumption 2.1.6 Modern lupin breeding 13 2.2.6.I Lupin breeding in Australia t4 Lupinus angus tifolius (naru owJeafe d lupin) Lup inus c o s ent inii (LV e s t e r n Aus tr al i an s and-pl ain lup in) Lupinus albus (white lupin) Lupinus luteus (yellow lupin) Lupinus pilosus and Lupinus atlanticus (rough-seeded lupins) 2.2 Calcareous soils 18 2.2.1 Origins and natural occurrence calcium carbonate T9 2.2.2Physical forms and chemistry of calcium carbonate 20 Physical forms Chemistry 2.3 Plant growth on calcareous soils 2T 2.3.1 Nutrient toxicities and deficiencies associated with calcareous soils 22 Bicarbonate Boron toxicity Sodicity Phosphorus deficiency Micronutrient deficiencies (Fe, Mn, Zn, Cu) 2.3.2 Adaptive mechanisms for tolerance 25 Bicarbonate Boron toxicity Sodicity Phosphorus deficiency Micronutrient deficiencies (Fe, Mn, Zn, Cu) ll 2.3.3 Breeding for tolerance to calcareous soils 27 Bicarbonate Boron toxicity Sodicity Phosphorus deficiency Micronutrient fficiencies 2.3.4 Tolerance of lupins to calcareous soils 28 2.4 Conclusion 29 Chapter 3 - Adaptation of Lupinus angustifolius L. -
Foreign Exploration and Host Specificity Testing of Biological
FOREIGN EXPL ORATION & HOST SPECIFICIT Y TESTING OF BIOLOGICAL CO NTROL AGENTS OF FRENCH BROOM IN CALIFORNIA INTERNATIONAL BROOM INITIATIVE PROJECT 2001-2002 Andy Sheppard Principal Scientist Foreign Exploration & Host Specificity Testing of Biological Control Agents of French Broom in California Final Report 31 January 2002 Andy Sheppard1 Thierry Thomann2 & Sylvie Agret2 1 CSIRO Entomology, GPO Box, 1700 Canberra ACT 2601 2 CSIRO European laboratory, Campus International de Baillarguet, 34980 Montferrier-sur-Lez, France. Executive summary This is the final report on work carried out for the biological control of French broom in California by Commonwealth Scientific and Industrial Research Organisation at its European Laboratory in France in collaboration with the USDA European Biological Control Laboratory. Survey trips have been completed to Tunisia, southern Spain and western Portugal. Available resources limited a full suite of planned trips. Morocco and eastern Mediterranean Turkey are the only countries that still need to be surveyed. A recent study of the taxonomy of Genista suggests Morocco is the key region for undiscovered potential biocontrol agents. Analysis of the results of previous trips is presented including validation of the sampling regime and the impacts of seed feeding insects on the seed production of French broom and close relatives. Insect biology and culture development studies have been completed for the psyllid Arytinnis hakani. This species was found to have 5 nymphal instars and be multi-voltine with a 40-45 day generation time, passing the hot summer months as early instar nymphs. Lepidapion argentatum specificity and taxonomic status is unclear from current literature but a PhD project based around this group has recently obtained funding. -
6 Lupins in European Cropping Systems
©CAB International 2017 – for chapter 6 authors 6 Lupins in European Cropping Systems FABIO GRESTA,1* MICHAEL WINK,2 UDO PRINS,3 MICHAEL ABBERTON,4 JESSICA CAPRARO,5 ALESSIO SCARAFONI5 AND GEORGE HILL6 1Mediterranean University of Reggio Calabria, Reggio Calabria, Italy; 2Institute of Pharmacy and Molecular Biotechnology, Heidelberg University, Germany; 3Louis Bolk Institute, Driebergen, the Netherlands; 4Genetic Resources Centre, International Institute of Tropical Agriculture, Nigeria; 5University of Milan, Italy; 6Lincoln University, New Zealand Abstract The lupins are an interesting group of legume crop species that produce large seeds containing up to 40% protein. The genus Lupinus is part of the tribe Genisteae. More than 170 species have been described from the New World and only 12 species from Europe, North and East Africa. Wild lupins are bitter and toxic because they produce quinolizidine alkaloids as a means of chemical defence. During domestication, lupins with low alkaloid contents were selected, leading to ‘sweet’ lupins with alkaloid con- tents below 0.02% in the protein-rich seeds, which can be used both for human and animal consumption. The domesticated lupins include Lupinus angustifolius, Lupinus albus, Lupinus luteus and Lupinus mutabilis. Blue or narrow-leafed lupin (L. angustifolius) is the most widely cultivated of them, with a worldwide production of more than 1.3 million t. Several challenges remain for lupin breeding, including the improvement of quantitative and qualitative traits, adaptation to alkaline soil and resistance to fungal pathogens. Introduction and Taxonomy Lupin species from the Americas are mostly herbaceous perennials, whereas Old World lupins are generally annuals. All of them host symbiotic nitrogen- fixing Bradyrhizobium in root nodules (Sprent and McKey, 1994). -
Genetic Diversity of Legume Species and Their Utilization in Vietnam
54 JIRCAS International Symposium Series 2: 54-66 Session 1-5 (3) Genetic Diversity of Legume Species and Their Utilization in Vietnam TRAN, Van Lai' and MAI, Quang Vinh" Abstract Due to the wide range of latitude and complicated topography. Vietnam is very rich in plant genetic resources, of which legumes are widespread and economically important. After a series of studies, Vietnamese breeders and researchers have evaluated a large number of legume accessions. Based on the resulted, it became possible to proceed to the selection, in duce mutations and breed several legume varieties and lines that can meet various require ments of production and environmental protection. Despite the great success in their utilization, since many legume species have not been properly studied, they remain non-or under-utilized. To preserve and use the legume genetic resources in Vietnam, more concerted efforts on the part of the researchers, as well as close cooperation and collaboration with various organizations in the world are required. Natural conditions and economic importance of legume development in Vietnam Vietnam is a small country. With 330,000 km' of territory curving as an S letter stretching over 1,600 km from 8° 23' to 23' 22' North there are diverse climatic conditions : tropical, subtropical as well as tem perate in the high mountains of the northern, central and southern parts of the country. In general Viet nam is typically a tropical and monsoon country, where winter is distinctly a dry season. In the northern plains the cold winter lasts from November to April, the average temperature being l6°C. -
Characterization and Prediction by NIR in Lupins Seeds
Characterization and prediction by NIR in lupins seeds Bachelor project Xabier Gainzarain Domaica, NDI90022 University of Copenhagen Faculty of Life Sciences Department of Agriculture and Ecology June 2010 Preface This project has been supervised by Christian Andreasen, Associate Professor and Head of Crop Science, employed at the Department of Agriculture and Ecology/Crop Science. I would like to thank Søren Thorndal Jørgensen, PhD Student at Department of Agriculture and Ecology/Crop Science, and especially to Birthe Møller Jespersen, employed at the Department of Food Science/Quality and Technology. Furthermore, I would like to thank to Britta Garly Henriksen, Senior Laboratory Assistant in the Department of Agriculture and Ecology/Crop Science. Xabier Gainzarain Domaica Stud. BSc in Technical Agriculture Engineering Xabier Gainzarain Domaica University of Copenhagen 1 Contents 1. Abstract....................................................................................................................5 2. Introduction.............................................................................................................6 3. Theory......................................................................................................................7 3.1 Lupin......................................................................................................7 3.1.1 Description.....................................................................7 3.1.2 Distribution and ecology................................................8 3.1.2.1 -
The Puzzling Fate of a Lupin Chromosome Revealed by Reciprocal Oligo-FISH and BAC-FISH Mapping
G C A T T A C G G C A T genes Article The Puzzling Fate of a Lupin Chromosome Revealed by Reciprocal Oligo-FISH and BAC-FISH Mapping Wojciech Bielski 1,* , Michał Ksi ˛a˙zkiewicz 1 , Denisa Šimoníková 2 , Eva Hˇribová 2 , Karolina Susek 1 and Barbara Naganowska 1 1 Department of Genomics, Institute of Plant Genetics, Polish Academy of Sciences, 60-479 Poznan, Poland; [email protected] (M.K.); [email protected] (K.S.); [email protected] (B.N.) 2 Institute of Experimental Botany of the Czech Academy of Sciences, Centre of the Region Hana for Biotechnological and Agricultural Research, 77900 Olomouc, Czech Republic; [email protected] (D.Š.); [email protected] (E.H.) * Correspondence: [email protected]; Tel.: +48-616-550-245 Received: 6 November 2020; Accepted: 8 December 2020; Published: 10 December 2020 Abstract: Old World lupins constitute an interesting model for evolutionary research due to diversity in genome size and chromosome number, indicating evolutionary genome reorganization. It has been hypothesized that the polyploidization event which occurred in the common ancestor of the Fabaceae family was followed by a lineage-specific whole genome triplication (WGT) in the lupin clade, driving chromosome rearrangements. In this study, chromosome-specific markers were used as probes for heterologous fluorescence in situ hybridization (FISH) to identify and characterize structural chromosome changes among the smooth-seeded (Lupinus angustifolius L., Lupinus cryptanthus Shuttlew., Lupinus micranthus Guss.) and rough-seeded (Lupinus cosentinii Guss. and Lupinus pilosus Murr.) lupin species. Comparative cytogenetic mapping was done using FISH with oligonucleotide probes and previously published chromosome-specific bacterial artificial chromosome (BAC) clones. -
Ecology of Sydney Plant Species Part 4: Dicotyledon Family Fabaceae
552 Cunninghamia Vol. 4(4): 1996 M a c q u a r i e R i v e r e g n CC a Orange R Wyong g n i Gosford Bathurst d i Lithgow v Mt Tomah i Blayney D R. y r Windsor C t u a o b Oberon s e x r e s G k Penrith w a R Parramatta CT H i ve – Sydney r n a Abe e Liverpool rcro p m e b Botany Bay ie N R Camden iv Picton er er iv R y l l i Wollongong d n o l l o W N Berry NSW Nowra 050 Sydney kilometres Figure 1. The Sydney region For the Ecology of Sydney Plant Species the Sydney region is defined as the Central Coast and Central Tablelands botanical subdivisions. Benson & McDougall, Ecology of Sydney plant species 4: Fabaceae 553 Ecology of Sydney Plant Species Part 4 Dicotyledon family Fabaceae Doug Benson and Lyn McDougall Abstract Benson, Doug and McDougall, Lyn (National Herbarium of New South Wales, Royal Botanic Gardens, Sydney, Australia 2000) 1996 Ecology of Sydney Plant Species: Part 4 Dicotyledon family Fabaceae. Cunninghamia 4(4) 553–000. Ecological data in tabular form is provided on 311 plant species of the family Fabacae, 243 native and 68 exotics, mostly naturalised, occurring in the Sydney region, defined by the Central Coast and Central Tablelands botanical subdivisions of New South Wales (approximately bounded by Lake Macquarie, Orange, Crookwell and Nowra). Relevant Local Government Areas are Auburn, Ashfield, Bankstown, Bathurst, Baulkham Hills, Blacktown, Blayney, Blue Mountains, Botany, Burwood, Cabonne, Camden, Campbelltown, Canterbury, Cessnock, Concord, Crookwell, Drummoyne, Evans, Fairfield, Greater Lithgow, Gosford, Hawkesbury, Holroyd, Hornsby, Hunters Hill, Hurstville, Kiama, Kogarah, Ku-ring-gai, Lake Macquarie, Lane Cove, Leichhardt, Liverpool, Manly, Marrickville, Mosman, Mulwaree, North Sydney, Oberon, Orange, Parramatta, Penrith, Pittwater, Randwick, Rockdale, Ryde, Rylstone, Shellharbour, Shoalhaven, Singleton, South Sydney, Strathfield, Sutherland, Sydney City, Warringah, Waverley, Willoughby, Wingecarribee, Wollondilly, Wollongong, Woollahra and Wyong. -
Nuclear DNA Amounts in Angiosperms: Targets, Trends and Tomorrow
Annals of Botany Page 1 of 124 doi:10.1093/aob/mcq258, available online at www.aob.oxfordjournals.org Nuclear DNA amounts in angiosperms: targets, trends and tomorrow M. D. Bennett* and I. J. Leitch Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK * For correspondence. E-mail: [email protected] Received: 25 August 2010 Returned for revision: 18 October 2010 Accepted: 24 November 2010 CONTENTS INTRODUCTION 2 Extending the range of genome sizes encountered in angiosperms 3 The need for reference lists 4 TARGETS IN GENOME SIZE RESEARCH 4 Downloaded from Meeting targets for species representation 4 Progress towards targets for familial representation 5 Improved systematic representation for genera 6 Improved representation of other groups 6 TRENDS IN TECHNIQUES USED TO ESTIMATE GENOME SIZE 7 The rise in flow cytometry as the technique of choice for genome size estimations 7 http://aob.oxfordjournals.org/ Development of different isolation buffers for flow cytometry 7 The application of flow cytometry to plant systematics 8 Recent developments in the application of flow cytometry to genome size studies 8 (i) The use of seeds 8 (ii) Ease of access to methodological data 8 (iii) New equipment 8 Are there any new techniques for estimating genome size on the horizon? 9 (i) Can real time PCR be used for estimating plant genome sizes? 9 (ii) Will ‘complete’ genome sequencing give useable genome size estimates? 9 TOMORROW 13 at NIH Library on December 30, 2015 Uncovering and collating genome size data from diverse published sources 14 Screening ex situ and in situ collections as sources of target taxa 15 DEDICATION 15 LITERATURE CITED 16 APPENDIX 19 Notes to the Appendix 19 Original references for DNA values 121 † Background and Aims The amount of DNA in an unreplicated gametic chromosome complement is known as the C-value and is a key biodiversity character of fundamental significance with many practical and predictive uses. -
IBI Project. Foreign Exploration and Host Specificity Testing of Biological
FOREIGN EXPLORATION & HOST SPECIFICITY TESTING OF BIOLOGICAL CONTROL AGENTS OF FRENCH BROOM IN CALIFORNIA PPPHHHAAASSSEEE 222 INTERNATIONAL BROOM INITIATIVE PROJECT 2002-2003 Andy Sheppard: Principal Scientist 1 Foreign Exploration & Host Specificity Testing of Biological Control Agents of French Broom in California Phase II Final Report August 2003 Andy Sheppard Thierry Thomann2 CSIRO European laboratory, Campus International de Baillarguet, 34980 Montferrier-sur-Lez, France. 2 Executive summary This is the final report on phase 2 work carried out for the biological control of French broom in California by Commonwealth Scientific and Industrial Research Organisation at its European Laboratory in France in collaboration with the USDA European Biological Control Laboratory. Survey trips associated with the first objective have been completed to southern Spain and western Portugal and southern France to finish pod collections as well as faunal surveys. The planned trip to Morocco has had to be delayed due to unavailability of collecting permits. Analysis of the results of all trips to-date is presented. Eighty five species of phytophagous arthropod have now been found on French broom. Two potential agents, the stem-mining beetle (Agrilus antiquus) and fly (Chyliza leptogaster) appear to be capable of killing the plant prior to maturity, while the highly specific apionid weevil (Lepidapion ?argentatum) can destroy up to 63% of the seed production in the native range. The specialist psyllid, Arytinnis hakani, also appears to be highly damaging. The natural enemy fauna was most diverse and the levels of predispersal seed losses to specialist seed feeders were highest in the Western Mediterranean in particular southern Spain, but there is high variation between sites, probably due to habitat, weed infestation size and age. -
The Biology of Lupinus L. (Lupin Or Lupine)
The Biology of Lupinus L. (lupin or lupine) Photograph courtesy of Alan Meldrum, Pulse Australia Version 1: April 2013 This document provides an overview of baseline biological information relevant to risk assessment of genetically modified forms of the species that may be released into the Australian environment. For information on the Australian Government Office of the Gene Technology Regulator visit <http://www.ogtr.gov.au> The Biology of Lupinus L. (lupin or lupine) Office of the Gene Technology Regulator The Biology of Lupinus L. (Lupin or Lupine) Office of the Gene Technology Regulator TABLE OF CONTENTS TABLE OF CONTENTS ................................................................................................................................ 1 PREAMBLE ................................................................................................................................................... 3 SECTION 1 TAXONOMY ...................................................................................................................... 3 SECTION 2 ORIGIN AND CULTIVATION ......................................................................................... 4 2.1 CENTRE OF DIVERSITY AND DOMESTICATION ............................................................ 4 2.2 COMMERCIAL USES ................................................................................................. 5 2.3 CULTIVATION IN AUSTRALIA ................................................................................... 6 2.3.1 Commercial propagation -
Evaluating the Genetic Relatedness Within Lupinus Pilosus L. Species Based on RAPD Analysis
Volume 8, Number 1, March .2015 ISSN 1995-6673 JJBS Pages 61 - 64 Jordan Journal of Biological Sciences Evaluating the Genetic Relatedness within Lupinus pilosus L. Species Based on RAPD Analysis Ibrahim M. AlRawashdeh¹,* and Nasab Q. AlRawashdeh² ¹Department of Biological Science, Faculty of Science, Al-Hussein Bin Talal University, P. O. Box (20), Ma'an ² Director of Biodiversity Directorate, NCARE, Jordan Received: December 26, 2014 Revised: January 13, 2015 Accepted: January 17, 2015 Abstract Nine Random Amplified Polymorphic DNA (RAPD) primers showing polymorphic bands were used to determine the genetic relatedness among and within single individual plants of Lupinus pilosus and used for the construction of the dendrogram and the similarity matrix. A total of 1112 bands were obtained, 219 of which were polymorphic. Similarity values among the studied single individuals of Lupinus pilosus ranged from 0.450 to 0.02. The cluster analysis obtained by Unweighted Pair-Group Method with arithmetic averages (UPGMA) grouped the tested individuals into three clusters. A genetic variation was found within Lupinus pilosus based on RAPD markers. The variability emphasis the presence of genetic diversity within Lupinus pilosus species. Keywords: Lupine, Genetic diversity, Polymorphism, RAPD. genotypes from 3 lupin species (Lupinus albus, L. 1. Introduction angustifolius, L. luteus) using 15 primers in each case (Yorgancilar et al., 2009). Talhinhas et al. (2003) Lupinus, commonly known as Lupine or lupin, is a used AFLP, ISSR and RAPD techniques to genus including more than 200 species; it is one of the evaluate the genetic diversity among L. albus, L. most diverse and widespread taxonomic groups of angustifolius, L. -
Patterns of Symbiotic Calcium Oscillations
Patterns of symbiotic calcium oscillations A thesis submitted to the University of East Anglia for the degree of Doctor of Philosophy Anna Emma Ulrika Granqvist John Innes Centre Norwich, September 2012 c This copy of the thesis has been supplied on condition that anyone who consults ! it is understood to recognise that its copyright rests with the author and that use of any information derived there from must be in accordance with current UK Copyright Law. In addition, any quotation or extract must include full attribution. To my family, with love Abstract Nuclear-localised calcium (Ca2+) oscillations have been shown to be necessary for the establishment of both arbuscular mycorrhizal and rhizobial symbioses. This thesis focuses on the analysis of the nature of this Ca2+ signature and an investigation into how this signature might have changed during the evolution of arbuscular mycorrhizal and root nodule symbioses. The work combines mathe- matical and experimental biology. A method for detecting frequencies using Bayesian inference, Bayesian Spec- trum Analysis, has been tested and further developed for use in the analysis of Ca2+ oscillations. A mathematical model of the oscillatory system has been inves- tigated with bifurcation analysis, focusing on how Ca2+-binding proteins might account for the experimentally observed variation in the signal. Data were collected for Ca2+ spiking induced by the diffusible signal molecules from the arbuscular mycorrhizal and rhizobial symbioses. No significant differ- ences were found between the patterns of Ca2+ oscillations. This study was extended to a group of phylogenetically diverse plants in order to investigate whether there is evidence for changes in the patterns of Ca2+ oscillations during the evolution of the signalling pathway from the more ancient arbuscular symbio- sis to the more recent root nodule symbiosis.