Ranavirus Disease
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Long-Term Monitoring of the Endemic Rana Latastei: Suggestions for After-LIFE Management
Long-term monitoring of the endemic Rana latastei: suggestions for after-LIFE management L UCA C ANOVA and A LESSANDRO B ALESTRIERI Abstract We monitored egg clutch numbers of a popula- loss (Houlahan & Findlay, ; Cushman, ), pollution tion of the endemic Italian agile frog Rana latastei in a (Bridges & Semlitsch, ), disease epidemics and climate Site of Community Interest in northern Italy (SCI IT change (Kiesecker et al., ; Ficetola & Maiorano, ). ) during – with the aim of assessing the As for many other taxa (Menzel et al., ; Thackeray long-term variation in its abundance. We walked along et al., ; Chen et al., ), a shift to earlier breeding as the banks of canals and small ponds (n = ) – times per a result of global warming has been reported for several week between early February and mid-April each year to anuran species (Terhivuo, ; Reading, ; Corn, ; detect egg clutches. The relationships between the start of Tryjanovski et al., ). Shifts are stronger for anurans than the breeding season, yearly egg mass counts, rate of yearly those reported for trees, birds and butterflies (Parmesan, change in the number of recorded egg masses and climat- ), but the consequences of earlier breeding for popula- ic and environmental variables were assessed by multiple re- tion dynamics are still unknown. gression. The first deposition of eggs occurred progressively Neither phenological shifts (Blaustein et al., ), nor later in the year throughout the study period and mean air population decline (Blaustein et al., ; Richter et al., temperature during the breeding season decreased over this ; Stuart et al., ) affect all amphibian populations. period. Agile frogs showed high deposition site-fidelity. -
Changes to Virus Taxonomy 2004
Arch Virol (2005) 150: 189–198 DOI 10.1007/s00705-004-0429-1 Changes to virus taxonomy 2004 M. A. Mayo (ICTV Secretary) Scottish Crop Research Institute, Invergowrie, Dundee, U.K. Received July 30, 2004; accepted September 25, 2004 Published online November 10, 2004 c Springer-Verlag 2004 This note presents a compilation of recent changes to virus taxonomy decided by voting by the ICTV membership following recommendations from the ICTV Executive Committee. The changes are presented in the Table as decisions promoted by the Subcommittees of the EC and are grouped according to the major hosts of the viruses involved. These new taxa will be presented in more detail in the 8th ICTV Report scheduled to be published near the end of 2004 (Fauquet et al., 2004). Fauquet, C.M., Mayo, M.A., Maniloff, J., Desselberger, U., and Ball, L.A. (eds) (2004). Virus Taxonomy, VIIIth Report of the ICTV. Elsevier/Academic Press, London, pp. 1258. Recent changes to virus taxonomy Viruses of vertebrates Family Arenaviridae • Designate Cupixi virus as a species in the genus Arenavirus • Designate Bear Canyon virus as a species in the genus Arenavirus • Designate Allpahuayo virus as a species in the genus Arenavirus Family Birnaviridae • Assign Blotched snakehead virus as an unassigned species in family Birnaviridae Family Circoviridae • Create a new genus (Anellovirus) with Torque teno virus as type species Family Coronaviridae • Recognize a new species Severe acute respiratory syndrome coronavirus in the genus Coro- navirus, family Coronaviridae, order Nidovirales -
The DNA Virus Invertebrate Iridescent Virus 6 Is a Target of the Drosophila Rnai Machinery
The DNA virus Invertebrate iridescent virus 6 is a target of the Drosophila RNAi machinery Alfred W. Bronkhorsta,1, Koen W. R. van Cleefa,1, Nicolas Vodovarb,2, Ikbal_ Agah Ince_ c,d,e, Hervé Blancb, Just M. Vlakc, Maria-Carla Salehb,3, and Ronald P. van Rija,3 aDepartment of Medical Microbiology, Nijmegen Centre for Molecular Life Sciences, Nijmegen Institute for Infection, Inflammation, and Immunity, Radboud University Nijmegen Medical Centre, 6500 HB Nijmegen, The Netherlands; bViruses and RNA Interference Group, Institut Pasteur, Centre National de la Recherche Scientifique, Unité de Recherche Associée 3015, 75015 Paris, France; cLaboratory of Virology, Wageningen University, 6708 PB Wageningen, The Netherlands; dDepartment of Genetics and Bioengineering, Yeditepe University, Istanbul 34755, Turkey; and eDepartment of Biosystems Engineering, Faculty of Engineering, Giresun University, Giresun 28100, Turkey Edited by Peter Palese, Mount Sinai School of Medicine, New York, NY, and approved October 19, 2012 (received for review April 28, 2012) RNA viruses in insects are targets of an RNA interference (RNAi)- sequently, are hypersensitive to virus infection and succumb more based antiviral immune response, in which viral replication inter- rapidly than their wild-type (WT) controls (11–14). mediates or viral dsRNA genomes are processed by Dicer-2 (Dcr-2) Small RNA cloning and next-generation sequencing provide into viral small interfering RNAs (vsiRNAs). Whether dsDNA virus detailed insights into vsiRNA biogenesis. In several studies in infections are controlled by the RNAi pathway remains to be insects, the polarity of the vsiRNA population deviates strongly determined. Here, we analyzed the role of RNAi in DNA virus from the highly skewed distribution of positive strand (+) over infection using Drosophila melanogaster infected with Invertebrate negative (−) viral RNAs that is generally observed in (+) RNA iridescent virus 6 (IIV-6) as a model. -
Ecology and Pathology of Amphibian Ranaviruses
Vol. 87: 243–266, 2009 DISEASES OF AQUATIC ORGANISMS Published December 3 doi: 10.3354/dao02138 Dis Aquat Org OPENPEN ACCESSCCESS REVIEW Ecology and pathology of amphibian ranaviruses Matthew J. Gray1,*, Debra L. Miller1, 2, Jason T. Hoverman1 1274 Ellington Plant Sciences Building, Center for Wildlife Health, Department of Forestry Wildlife and Fisheries, Institute of Agriculture, University of Tennessee, Knoxville, Tennessee 37996-4563, USA 2Veterinary Diagnostic and Investigational Laboratory, College of Veterinary Medicine, University of Georgia, 43 Brighton Road, Tifton, Georgia 31793, USA ABSTRACT: Mass mortality of amphibians has occurred globally since at least the early 1990s from viral pathogens that are members of the genus Ranavirus, family Iridoviridae. The pathogen infects multiple amphibian hosts, larval and adult cohorts, and may persist in herpetofaunal and oste- ichthyan reservoirs. Environmental persistence of ranavirus virions outside a host may be several weeks or longer in aquatic systems. Transmission occurs by indirect and direct routes, and includes exposure to contaminated water or soil, casual or direct contact with infected individuals, and inges- tion of infected tissue during predation, cannibalism, or necrophagy. Some gross lesions include swelling of the limbs or body, erythema, swollen friable livers, and hemorrhage. Susceptible amphi- bians usually die from chronic cell death in multiple organs, which can occur within a few days fol- lowing infection or may take several weeks. Amphibian species differ in their susceptibility to rana- viruses, which may be related to their co-evolutionary history with the pathogen. The occurrence of recent widespread amphibian population die-offs from ranaviruses may be an interaction of sup- pressed and naïve host immunity, anthropogenic stressors, and novel strain introduction. -
THE AGILE FROG Species Action Plan Rana Dalmatina SUMMARSUMMARSUMMARYYY DOCUMENT
THE AGILE FROG Species Action Plan Rana dalmatina SUMMARSUMMARSUMMARYYY DOCUMENT The agile frog Rana dalmatina is Despite the efforts of these distributed widely throughout much of organisations, the future of Jersey’s southern and central Europe, but is agile frog is still far from secure. The found in only a few northern locations factors which probably played a key including Jersey - the frog is not found role in the frogs decline are still very anywhere else in the British Isles. The much in evidence: Jersey population of the agile frog has been declining in both range and •water quality and quantity, as a result SSSpppecial pointsss ofofof numbers since the early 1900’s. In the of intensive agriculture, are still below inininteresteresteresttt::: 1970’s only seven localities were listed EU standards in many areas; The agile frog is protected where the frog could still be found, and •the continuing alteration, disturbance, under schedule 1 of the by the mid 1980’s this had fallen to and loss of potentially suitable Conservation of Wildlife only two sites. In 1987 one of the amphibian habitat; (Jersey) Law 2000. remaining two populations was lost as a •the growing numbers of predatory result of a lethal spill of agricultural ducks, cats, and feral ferrets. DESCRIPTION pesticide into the breeding pond. The The agile frog Rana dalmatina species is now believed to be confined These and other factors have combined is a European brown frog, to a single vulnerable population in the to reduce the frog population to the growing up to 90 mm (snout south-west of the island. -
Emerging Viral Diseases of Fish and Shrimp Peter J
Emerging viral diseases of fish and shrimp Peter J. Walker, James R. Winton To cite this version: Peter J. Walker, James R. Winton. Emerging viral diseases of fish and shrimp. Veterinary Research, BioMed Central, 2010, 41 (6), 10.1051/vetres/2010022. hal-00903183 HAL Id: hal-00903183 https://hal.archives-ouvertes.fr/hal-00903183 Submitted on 1 Jan 2010 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Vet. Res. (2010) 41:51 www.vetres.org DOI: 10.1051/vetres/2010022 Ó INRA, EDP Sciences, 2010 Review article Emerging viral diseases of fish and shrimp 1 2 Peter J. WALKER *, James R. WINTON 1 CSIRO Livestock Industries, Australian Animal Health Laboratory (AAHL), 5 Portarlington Road, Geelong, Victoria, Australia 2 USGS Western Fisheries Research Center, 6505 NE 65th Street, Seattle, Washington, USA (Received 7 December 2009; accepted 19 April 2010) Abstract – The rise of aquaculture has been one of the most profound changes in global food production of the past 100 years. Driven by population growth, rising demand for seafood and a levelling of production from capture fisheries, the practice of farming aquatic animals has expanded rapidly to become a major global industry. -
Cefas PANDA Report
Project no. SSPE-CT-2003-502329 PANDA Permanent network to strengthen expertise on infectious diseases of aquaculture species and scientific advice to EU policy Coordination Action, Scientific support to policies WP4: Report on the current best methods for rapid and accurate detection of the main disease hazards in aquaculture, requirements for improvement, their eventual standardisation and validation, and how to achieve harmonised implementation throughout Europe of the best diagnostic methods Olga Haenen*, Inger Dalsgaard, Jean-Robert Bonami, Jean-Pierre Joly, Niels Olesen, Britt Bang Jensen, Ellen Ariel, Laurence Miossec and Isabelle Arzul Work package leader & corresponding author: Dr Olga Haenen, CIDC-Lelystad, NL ([email protected]) PANDA co-ordinator: Dr Barry Hill, CEFAS, UK; www.europanda.net © PANDA, 2007 Cover image: Koi with Koi Herpes Virus Disease: enophthalmia and gill necrosis (M.Engelsma acknowl.) Contents Executive summary 5 Section 1 Introduction 7 1.1 Description of work 7 1.2 Deliverables 8 1.3 Milestones and expected results 9 1.4 Structure of the report and how to use it 9 1.5 General remarks and links with other WPs of PANDA 9 Section 2 Materials and methods 10 2.1 Task force 10 2.2 Network 10 2.3 Workshops and dissemination 10 2.4 Analysis of data 10 2.5 Why harmonization throughout Europe background and aim 11 2.6. CRL functions 11 Section 3 Results 12 3.1 Task force 12 3.2 Network 12 3.3 Workshops and dissemination 12 3.4 Analysis of data 14 Diseases/pathogens of fish 14 3.4.1 Epizootic haematopoietic necrosis -
Investigations Into the Life History Stages of the Common Frog (Rana Temporaria) Affected by an Amphibian Ranavirus in the United Kingdom
260 AMPHIBIAN DISEASES Herpetological Review, 2013, 44(2), 260–263. © 2013 by Society for the Study of Amphibians and Reptiles Investigations into the Life History Stages of the Common Frog (Rana temporaria) Affected by an Amphibian Ranavirus in the United Kingdom Ranaviruses are emerging infectious disease agents that af- owned land, so in order to maintain confidentiality we are un- fect a wide range of ectothermic and poikilothermic vertebrates: able to provide more detailed location information than is pro- fish, reptiles (including turtles and tortoises) and amphibians vided in Tables 1 and 2. (Ahne et al. 1997; Chinchar et al. 2009; Miller et al. 2011). In the Live tadpoles were transported in a common container in United Kingdom (UK), amphibian ranaviruses began to emerge pond water to the Institute of Zoology, Zoological Society of in the late 1980s and early 1990s in southeast England (Cunning- London, London, UK. Upon arrival, tadpoles were euthanized ham et al. 1996) and manifested as adult mass morbidity and using an overdose of MS-222 (1g/L tricaine methanesulphonate, mortality events (Cunningham et al. 1993; Cunningham et al. Thompson & Joseph Ltd., Norwich, UK) buffered to pH 7.0 with 1996; Drury et al. 1995). sodium bicarbonate. Tissue samples were then dissected out Evidence for local ranavirus outbreaks in the UK have, to and frozen at -80°C for ranavirus screening. In the case of larger date, relied exclusively upon reports of moribund or dead adult tadpoles, tissues included the right anterior quarter of the body, common frogs (e.g. Cunningham et al. 1993; Cunningham et al. -
Northern Red-Legged Frog,Rana Aurora
COSEWIC Assessment and Status Report on the Northern Red-legged Frog Rana aurora in Canada SPECIAL CONCERN 2015 COSEWIC status reports are working documents used in assigning the status of wildlife species suspected of being at risk. This report may be cited as follows: COSEWIC. 2015. COSEWIC assessment and status report on the Northern Red-legged Frog Rana aurora in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. xii + 69 pp. (www.registrelep-sararegistry.gc.ca/default_e.cfm). Previous report(s): COSEWIC. 2004. COSEWIC assessment and update status report on the Red-legged Frog Rana aurora in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. vi + 46 pp. (www.sararegistry.gc.ca/status/status_e.cfm). Waye, H. 1999. COSEWIC status report on the red-legged frog Rana aurora in Canada in COSEWIC assessment and status report on the red-legged frog Rana aurora in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. 1-31 pp. Production note: COSEWIC would like to acknowledge Barbara Beasley for writing the status report on the Northern Red- legged Frog (Rana aurora) in Canada. This report was prepared under contract with Environment Canada and was overseen by Kristiina Ovaska, Co-chair of the COSEWIC Amphibian and Reptile Species Specialist Subcommittee. For additional copies contact: COSEWIC Secretariat c/o Canadian Wildlife Service Environment Canada Ottawa, ON K1A 0H3 Tel.: 819-938-4125 Fax: 819-938-3984 E-mail: COSEWIC/[email protected] http://www.cosewic.gc.ca Également disponible en français sous le titre Ếvaluation et Rapport de situation du COSEPAC sur la Grenouille à pattes rouges du Nord (Rana aurora ) au Canada. -
Evaluating Environmental DNA-Based Quantification of Ranavirus Infection
Molecular Ecology Resources (2015) doi: 10.1111/1755-0998.12461 Evaluating environmental DNA-based quantification of ranavirus infection in wood frog populations EMILY M. HALL,* ERICA J. CRESPI,* CAREN S. GOLDBERG† andJESSE L. BRUNNER* *School of Biological Sciences, Washington State University, PO Box 644236, Pullman, WA 99164-4236, USA, †School of the Environment, Washington State University, PO Box 646410, Pullman, WA 99164-2812, USA Abstract A variety of challenges arise when monitoring wildlife populations for disease. Sampling tissues can be invasive to hosts, and obtaining sufficient sample sizes can be expensive and time-consuming, particularly for rare species and when pathogen prevalence is low. Environmental DNA (eDNA)-based detection of pathogens is an alternative approach to surveillance for aquatic communities that circumvents many of these issues. Ranaviruses are emerging pathogens of ectothermic vertebrates linked to die-offs of amphibian populations. Detecting ranavirus infections is critical, but nonlethal methods have the above issues and are prone to false negatives. We report on the feasibility and effectiveness of eDNA-based ranavirus detection in the field. We compared ranavirus titres in eDNA samples collected from pond water to titres in wood frog (Lithobates sylvaticus; n = 5) tadpoles in sites dominated by this one species (n = 20 pond visits). We examined whether ranavirus DNA can be detected in eDNA from pond water when infections are present in the pond and if viral titres detected in eDNA samples correlate with the prevalence or intensity of ranavirus infections in tadpoles. With three 250 mL water samples, we were able to detect the virus in all visits with infected larvae (0.92 diagnostic sensitivity). -
Action Plan for the Conservation of the Italian Agile Frog (Rana Latastei) in Europe
Strasbourg, 26 October 2006 T-PVS/Inf (2006) 16 [Inf16e_2006.doc] CONVENTION ON THE CONSERVATION OF EUROPEAN WILDLIFE AND NATURAL HABITATS Standing Committee 26th meeting Strasbourg, 27-30 November 2006 __________ Action Plan for the Conservation of the Italian Agile Frog (Rana latastei) in Europe Document prepared by Paul Edgar* and David R. Bird *c/o The Herpetological Conservation Trust, 655a Christchurch Road, Boscombe Bournemouth, Dorset, BH1 4AP, UK, E-mail: [email protected] This document will not be distributed at the meeting. Please bring this copy. Ce document ne sera plus distribué en réunion. Prière de vous munir de cet exemplaire. T-PVS/Inf (2006) 16 - 2 - CONTENTS A. ITALIAN AGILE FROG - SPECIES ACTION PLAN SUMMARY........................................................3 1. Introduction .......................................................................................................................................3 2. Rationale............................................................................................................................................3 3. Objectives ..........................................................................................................................................3 4. Recommended Actions....................................................................................................................4 Table 1: Urgent Priority Actions for the Italian Agile Frog Rana latastei ................................................4 B. ITALIAN AGILE FROG – SPECIES -
Amphibian Identification
Amphibian Identification Common frog Adults 6-7 cm. Smooth skin, which appears moist. Coloration variable, includes brown, yellow and orange. Some females have red markings on lower body. Usually has a dark ‘mask’ marking behind the eye. Breeding male Markings also variable, Grey/pale blue including varying amounts throat. of black spots and stripes. Thick front legs. Dark (nuptial) pad on inner toes of Young froglets look like the front feet. Spawn is laid in gelatinous smaller versions of the clumps. adults. Common toad Adults 5-9 cm. Rough skin. Brown with darker markings. Less commonly, some individuals are very dark, almost black, others are brick-red. Breeding pair Males smaller than females. Breeding males can also be distinguished by dark (nuptial) pads on innermost two toes of the front feet. Toad spawn is laid in gelatinous strings, wrapped around vegetation. Less conspicuous than common frog spawn. Makes small hops rather than jumps of common frog. Toadlets transforming from the Juveniles are tadpole stage are often very dark similar colours in colour. to adults, including brick-red. ARG UK Natterjack toad Strictly protected species, requiring Similar in size and appearance to common toad, a licence to handle but with a pale stripe running along the back. or disturb. This is a rare species, unlikely to be found outside specific dune and heathland habitats. On hatching common frog and toad tadpoles Frog Tadpoles are black. As they develop, common frog tadpoles become mottled with bronze, whereas toad tadpoles remain uniformly dark until the last stages of development. Common frog and toad tadpoles generally complete Toad development in the summer, but development rates are variable; some tadpoles may not transform until later in the year, or they may even remain as tadpoles over winter, becoming much larger than normal.