Vitamin B3, the Nicotinamide Adenine Dinucleotides and Aging
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Calcium Affects Polyphosphate and Lipid Accumulation in Mucoromycota Fungi
Journal of Fungi Article Calcium Affects Polyphosphate and Lipid Accumulation in Mucoromycota Fungi Simona Dzurendova 1,*, Boris Zimmermann 1 , Achim Kohler 1, Kasper Reitzel 2 , Ulla Gro Nielsen 3 , Benjamin Xavier Dupuy--Galet 1 , Shaun Leivers 4 , Svein Jarle Horn 4 and Volha Shapaval 1 1 Faculty of Science and Technology, Norwegian University of Life Sciences, Drøbakveien 31, 1433 Ås, Norway; [email protected] (B.Z.); [email protected] (A.K.); [email protected] (B.X.D.–G.); [email protected] (V.S.) 2 Department of Biology, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark; [email protected] 3 Department of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, DK-5230 Odense M, Denmark; [email protected] 4 Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, Christian Magnus Falsens vei 1, 1433 Ås, Norway; [email protected] (S.L.); [email protected] (S.J.H.) * Correspondence: [email protected] or [email protected] Abstract: Calcium controls important processes in fungal metabolism, such as hyphae growth, cell wall synthesis, and stress tolerance. Recently, it was reported that calcium affects polyphosphate and lipid accumulation in fungi. The purpose of this study was to assess the effect of calcium on the accumulation of lipids and polyphosphate for six oleaginous Mucoromycota fungi grown under different phosphorus/pH conditions. A Duetz microtiter plate system (Duetz MTPS) was used for the cultivation. The compositional profile of the microbial biomass was recorded using Fourier-transform infrared spectroscopy, the high throughput screening extension (FTIR-HTS). -
Reversion of Poly-Phosphates to Ortho-Phosphates in Water Distribution Systems
University of Central Florida STARS Electronic Theses and Dissertations, 2004-2019 2007 Reversion Of Poly-phosphates To Ortho-phosphates In Water Distribution Systems Avinash Shekhar University of Central Florida Part of the Environmental Engineering Commons Find similar works at: https://stars.library.ucf.edu/etd University of Central Florida Libraries http://library.ucf.edu This Masters Thesis (Open Access) is brought to you for free and open access by STARS. It has been accepted for inclusion in Electronic Theses and Dissertations, 2004-2019 by an authorized administrator of STARS. For more information, please contact [email protected]. STARS Citation Shekhar, Avinash, "Reversion Of Poly-phosphates To Ortho-phosphates In Water Distribution Systems" (2007). Electronic Theses and Dissertations, 2004-2019. 3346. https://stars.library.ucf.edu/etd/3346 REVERSION OF POLY-PHOSPHATES TO ORTHO-PHOSPHATES IN WATER DISTRIBUTION SYSTEMS by AVINASH SHEKHAR B.E Vishweshwaraiah Technological University, India, 2005 A thesis submitted in partial fulfillment of the requirements for the degree of Master of Science in the Department of Civil and Environmental Engineering in the College of Engineering and Computer Science at the University of Central Florida Orlando, Florida Summer Term 2007 Major Professors: John D. Dietz James S. Taylor © 2007 Avinash Shekhar ii ABSTRACT Ortho-phosphates and poly-phosphates are rarely present at significant levels in raw water source but are purposefully added to the water in various forms to inhibit corrosion, iron oxidation (red water), or calcium carbonate precipitation (scale formation). Ortho-phosphates serve as building blocks for poly-phosphates, which includes structures in linear chain, branched chains (metaphosphate) and “glassy” poly-phosphate polymers. -
A Proposal to Rename the Hyperthermophile Pyrococcus Woesei As Pyrococcus Furiosus Subsp
Archaea 1, 277–283 © 2004 Heron Publishing—Victoria, Canada A proposal to rename the hyperthermophile Pyrococcus woesei as Pyrococcus furiosus subsp. woesei WIROJNE KANOKSILAPATHAM,1 JUAN M. GONZÁLEZ,1,2 DENNIS L. MAEDER,1 1,3 1,4 JOCELYNE DIRUGGIERO and FRANK T. ROBB 1 Center of Marine Biotechnology, University of Maryland Biotechnology Institute, Baltimore, MD 21202, USA 2 Present address: IRNAS-CSIC, P.O. Box 1052, 41080 Sevilla, Spain 3 Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20274, USA 4 Corresponding author ([email protected]) Received April 8, 2004; accepted July 28, 2004; published online August 31, 2004 Summary Pyrococcus species are hyperthermophilic mem- relatively rapidly at temperatures above 90 °C and produce ° bers of the order Thermococcales, with optimal growth tem- H2S from elemental sulfur (S ) (Zillig et al. 1987). Two Pyro- peratures approaching 100 °C. All species grow heterotrophic- coccus species, P. furiosus (Fiala and Stetter 1986) and ° ally and produce H2 or, in the presence of elemental sulfur (S ), P. woesei (Zillig et al. 1987), were isolated from marine sedi- H2S. Pyrococcus woesei and P.furiosus were isolated from ma- ments at a Vulcano Island beach site in Italy. They have similar rine sediments at the same Vulcano Island beach site and share morphological and physiological characteristics: both species many morphological and physiological characteristics. We re- are cocci and move by means of a tuft of polar flagella. They port here that the rDNA operons of these strains have identical are heterotrophic and grow optimally at 95–100 °C, utilizing sequences, including their intergenic spacer regions and part of peptides as major carbon and nitrogen sources. -
Nutrition 102 – Class 3
Nutrition 102 – Class 3 Angel Woolever, RD, CD 1 Nutrition 102 “Introduction to Human Nutrition” second edition Edited by Michael J. Gibney, Susan A. Lanham-New, Aedin Cassidy, and Hester H. Vorster May be purchased online but is not required for the class. 2 Technical Difficulties Contact: Erin Deichman 574.753.1706 [email protected] 3 Questions You may raise your hand and type your question. All questions will be answered at the end of the webinar to save time. 4 Review from Last Week Vitamins E, K, and C What it is Source Function Requirement Absorption Deficiency Toxicity Non-essential compounds Bioflavonoids: Carnitine, Choline, Inositol, Taurine, and Ubiquinone Phytoceuticals 5 Priorities for Today’s Session B Vitamins What they are Source Function Requirement Absorption Deficiency Toxicity 6 7 What Is Vitamin B1 First B Vitamin to be discovered 8 Vitamin B1 Sources Pork – rich source Potatoes Whole-grain cereals Meat Fish 9 Functions of Vitamin B1 Converts carbohydrates into glucose for energy metabolism Strengthens immune system Improves body’s ability to withstand stressful conditions 10 Thiamine Requirements Groups: RDA (mg/day): Infants 0.4 Children 0.7-1.2 Males 1.5 Females 1 Pregnancy 2 Lactation 2 11 Thiamine Absorption Absorbed in the duodenum and proximal jejunum Alcoholics are especially susceptible to thiamine deficiency Excreted in urine, diuresis, and sweat Little storage of thiamine in the body 12 Barriers to Thiamine Absorption Lost into cooking water Unstable to light Exposure to sunlight Destroyed -
Review Article Role of Nicotinamide in DNA Damage, Mutagenesis, and DNA Repair
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by PubMed Central SAGE-Hindawi Access to Research Journal of Nucleic Acids Volume 2010, Article ID 157591, 13 pages doi:10.4061/2010/157591 Review Article Role of Nicotinamide in DNA Damage, Mutagenesis, and DNA Repair Devita Surjana, Gary M. Halliday, and Diona L. Damian Discipline of Dermatology, Sydney Cancer Centre, Bosch Institute, University of Sydney at Royal Prince Alfred Hospital, Camperdown, Sydney, NSW 2006, Australia Correspondence should be addressed to Gary M. Halliday, [email protected] Received 16 April 2010; Accepted 13 June 2010 Academic Editor: Ashis Basu Copyright © 2010 Devita Surjana et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Nicotinamide is a water-soluble amide form of niacin (nicotinic acid or vitamin B3). Both niacin and nicotinamide are widely available in plant and animal foods, and niacin can also be endogenously synthesized in the liver from dietary tryptophan. Nicotinamide is also commercially available in vitamin supplements and in a range of cosmetic, hair, and skin preparations. Nicotinamide is the primary precursor of nicotinamide adenine dinucleotide (NAD+), an essential coenzyme in ATP production and the sole substrate of the nuclear enzyme poly-ADP-ribose polymerase-1 (PARP-1). Numerous in vitro and in vivo studies have clearly shown that PARP-1 and NAD+ status influence cellular responses to genotoxicity which can lead to mutagenesis and cancer formation. -
A Computational Approach for Identifying Plant-Based Foods for Addressing Vitamin Deficiency Diseases
University of Vermont ScholarWorks @ UVM UVM Honors College Senior Theses Undergraduate Theses 2015 A Computational Approach for Identifying Plant-Based Foods for Addressing Vitamin Deficiency Diseases Christina Yu University of Vermont Indra Neil Sarkar University of Vermont Follow this and additional works at: https://scholarworks.uvm.edu/hcoltheses Recommended Citation Yu, Christina and Sarkar, Indra Neil, "A Computational Approach for Identifying Plant-Based Foods for Addressing Vitamin Deficiency Diseases" (2015). UVM Honors College Senior Theses. 212. https://scholarworks.uvm.edu/hcoltheses/212 This Honors College Thesis is brought to you for free and open access by the Undergraduate Theses at ScholarWorks @ UVM. It has been accepted for inclusion in UVM Honors College Senior Theses by an authorized administrator of ScholarWorks @ UVM. For more information, please contact [email protected]. A Computational Approach for Identifying Plant-Based Foods for Addressing Vitamin Deficiency Diseases Christina Yu1 and Indra Neil Sarkar2,3 Key words: computing methodologies, vitamin deficiency diseases, vegetarian diet 1 Undergraduate Program in Biochemistry, University of Vermont, Burlington, VT 2 Department of Microbiology and Molecular Genetics, University of Vermont, Burlington, VT 3 Center for Clinical and Translational Science, University of Vermont, Burlington, VT 1 ABSTRACT Vitamins are nutrients that are essential to human health, and deficiencies have been shown to cause severe diseases. In this study, a computational approach was used to identify vitamin deficiency diseases and plant-based foods with vitamin content. Data from the United States Department of Agriculture Standard Reference (SR27), National Library of Medicine's Medical Subject Headings and MEDLINE, and Wikipedia were combined to identify vitamin deficiency diseases and vitamin content of plant-based foods. -
Use of Phosphates in Meat Products
African Journal of Biotechnology Vol. 10(86), pp. 19874-19882, 30 December, 2011 Available online at http://www.academicjournals.org/AJB DOI: 10.5897/AJBX11.023 ISSN 1684–5315 © 2011 Academic Journals Review Use of phosphates in meat products Nguyen Huynh Bach Son Long, Robert Gál and František Bu ňka* Department of Food Technology and Microbiology, Faculty of Technology, Tomas Bata University in Zlin, nam. T. G. Masaryka 5555, 760 01 Zlin, Czech Republic. Accepted 9 December, 2011 Phosphates offer a range of possibilities when used in meat and poultry productions. Food grade phosphates are used in meat products for several reasons such as changing and/or stabilizing of pH- value, increasing water holding capacity in order to lead to higher yields, decreasing losses of weight in cooking, improving texture and sensory properties (tenderness, juiciness, color and flavor), extending shelf-life, etc. In addition, phosphates in meat products are also sources of the supply of phosphorus for consumers through diet, which is an essential mineral for the lives of humans. This review is focused on phosphates’ properties, functions, application in meat and poultry products as well as influence on health. Key words: Monophosphate, diphosphate, polyphosphate, texture parameters, water holding capacity, yield, meat. INTRODUCTION The use of food additives has become more prominent additives and they are essential for several reasons such in recent years due to the increased production of as increasing pH, increasing water holding capacity prepared, processed and convenient foods (USDA, (WHC; structure of muscle protein is opened) in order to 2008). Additives are used for technological purposes in lead to higher yields and stabilized meat emulsions, the manufacturing, processing, preparation, treatment, decreasing cooking losses of weight, improving texture packaging, transportation or storage of certain foods, or and sensory properties (tenderness, juiciness, color, may be reasonably expected to result in them or their flavor), extending shelf-life, etc. -
Evidence for Associated Horizontal Gene Transfer in Pyrococcus Furiosus
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Digital.CSIC J Appl Genet 50(4), 2009, pp. 421–430 Original article CRISPR elements in the Thermococcales: evidence for associated horizontal gene transfer in Pyrococcus furiosus M.C. Portillo, J.M. Gonzalez Institute for Natural Resources and Agrobiology, IRNAS-CSIC, Sevilla, Spain Abstract. The presence and distribution of CRISPR (clustered regularly interspaced short palindrome repeat)el- ements in the archaeal order Thermococcales were analyzed. Four complete genome sequences from the species Pyrococcus abyssi, P. furiosus, P. horikoshii, and Thermococcus kodakaraensis were studied. A fragment of the genome of P. furiosus was flanked by CRISPR elements upstream and by a single element downstream. The composition of the gene sequences contained in this genome fragment (positions 699013 to 855319) showed sig- nificant differences from the other genes in the P. furiosus genome. Differences were observed in the GC content at the third codon positions and the frequency of codon usage between the genes located in the analyzed fragment and the other genes in the P. furiosus genome. These results represent the first evidence suggesting that repeated CRISPR elements can be involved in horizontal gene transfer and genomic differentiation of hyperthermophilic Archaea. Keywords: CRISPR, gene transfer, genome, hyperthermophilic Archaea, Pyrococcus furiosus. Introduction spacers and repetitive elements modified the phage-resistance phenotype of bacteria Genomic regions consisting of tandem repeat (Barrangou et al. 2007). The incorporation of short DNA elements, typically of 21–47 base pairs (bp) fragments of foreign DNA into the genome of in length, separated by nonrepetitive spacer se- prokaryotes at CRISPR loci has been reported quences of approximately similar length, have (Bolotin et al. -
Substrate Recognition and Mechanism Revealed by Ligand-Bound Polyphosphate Kinase 2 Structures
Substrate recognition and mechanism revealed by ligand-bound polyphosphate kinase 2 structures Alice E. Parnella,1, Silja Mordhorstb,1, Florian Kemperc, Mariacarmela Giurrandinoa, Josh P. Princea, Nikola J. Schwarzerc, Alexandre Hoferd, Daniel Wohlwendc, Henning J. Jessend,e, Stefan Gerhardtc, Oliver Einslec,f, Petra C. F. Oystong,h, Jennifer N. Andexerb,2, and Peter L. Roacha,g,2 aChemistry, University of Southampton, Southampton, Hampshire SO17 1BJ, United Kingdom; bInstitute of Pharmaceutical Sciences, Albert-Ludwigs- University Freiburg, 79104 Freiburg, Germany; cInstitute of Biochemistry, Albert-Ludwigs-University Freiburg, 79104 Freiburg, Germany; dOrganic Chemistry Institute, University of Zürich, 8057 Zürich, Switzerland; eInstitute of Organic Chemistry, Albert-Ludwigs-University Freiburg, 79104 Freiburg, Germany; fBioss Centre for Biological Signalling Studies, Albert-Ludwigs-University Freiburg, 79104 Freiburg, Germany; gInstitute for Life Sciences, University of Southampton, Southampton, Hampshire SO17 1BJ, United Kingdom; and hBiomedical Sciences, Defence Science and Technology Laboratory Porton Down, SP4 0JQ Salisbury, United Kingdom Edited by David Avram Sanders, Purdue University, West Lafayette, IN, and accepted by Editorial Board Member Gregory A. Petsko February 13, 2018 (received for review June 20, 2017) Inorganic polyphosphate is a ubiquitous, linear biopolymer built of mechanism is proposed to proceed via a phosphorylated enzyme up to thousands of phosphate residues that are linked by energy- intermediate (8), which -
Gene Cloning and Characterization of NADH Oxidase from Thermococcus Kodakarensis
African Journal of Biotechnology Vol. 10(78), pp. 17916-17924, 7 December, 2011 Available online at http://www.academicjournals.org/AJB DOI: 10.5897/AJB11.989 ISSN 1684–5315 © 2011 Academic Journals Full Length Research Paper Gene cloning and characterization of NADH oxidase from Thermococcus kodakarensis Naeem Rashid 1*, Saira Hameed 2, Masood Ahmed Siddiqui 3 and Ikram-ul-Haq 2 1School of Biological Sciences, University of the Punjab, Quaid-e-Azam Campus, Lahore 54590, Pakistan. 2Institute of Industrial Biotechnology, GC University, Lahore, Pakistan. 3Department of Chemistry, University of Balochistan, Quetta, Pakistan. Accepted 12 October, 2011 The genome search of Thermococcus kodakarensis revealed three open reading frames, Tk0304, Tk1299 and Tk1392 annotated as nicotinamide adenine dinucleotide (NADH) oxidases. This study deals with cloning, and characterization of Tk0304. The gene, composed of 1320 nucleotides, encodes a protein of 439 amino acids with a molecular weight of 48 kDa. Expression of the gene in Escherichia coli resulted in the production of Tk0304 in soluble form which was purified by heat treatment at 80°C followed by ion exchange chromatography. Enzyme activity of Tk0304 was enhanced about 50% in the presence of 30 µM flavin adenine dinucleotide (FAD) when assay was conducted at 60°C. Surprisingly the activity of the enzyme was not affected by FAD when the assay was conducted at 75°C or at higher temperatures. Tk0304 displayed highest activity at pH 9 and 80°C. The enzyme was highly thermostable displaying 50% of the original activity even after an incubation of 80 min in boiling water. Among the potent inhibitors of NADH oxidases, silver nitrate and potassium cyanide did not show any significant inhibitory effect at a final concentration of 100 µM. -
Developing a Single Strain for in Vitro Salvage Synthesis of NAD+ at High
Taniguchi et al. Microb Cell Fact (2019) 18:75 https://doi.org/10.1186/s12934-019-1125-x Microbial Cell Factories RESEARCH Open Access Developing a single strain for in vitro salvage synthesis of NAD+ at high temperatures and its potential for bioconversion Hironori Taniguchi1, Makoto Imura2, Kenji Okano1 and Kohsuke Honda1* Abstract Background: Thermostable enzymes have several advantages over their mesophilic counterparts for industrial appli- cations. However, trade-ofs such as thermal instability of enzyme substrates or co-factors exist. Nicotinamide adenine dinucleotide (NAD+) is an important co-factor in many enzyme-catalyzed oxidation–reduction reactions. This com- pound spontaneously decomposes at elevated temperatures and basic pH, a property that limits catalysis of NAD+/ NADH-dependent bioconversions using thermostable enzymes to short timeframes. To address this issue, an “in vitro metabolic pathway” for salvage synthesis of NAD+ using six thermophilic enzymes was constructed to resynthesize NAD+ from its thermal decomposition products at high temperatures. Results: An integrated strain, E. coli DH5α (pBR-CI857, pGETS118-NAD+), that codes for six thermophilic enzymes in a single operon was constructed. Gene-expression levels of these enzymes in the strain were modulated by their sequential order in the operon. An enzyme solution containing these enzymes was prepared by the heat purifcation from the cell lysate of the integrated strain, and used as an enzyme cocktail for salvage synthesis of NAD+. The salvage activity for synthesis of NAD+ from its thermal decomposition products was found to be 1 1 0.137 0.006 µmol min− g− wet cells. More than 50% of this initial activity remained after 24 h at 60 °C. -
Ortho Vs Poly
by Dr. Raun Lohry Ortho Vs. Poly Author takes a look at the history and behavior of ortho and polyphosphates. Summary: Reports covering nearly 40 temperature related. Many know first barley. Gilliam and Sample (1968) years of research present strong hand the problem of hydrolysis that studied hydrolysis rates in soils with evidence of the rapidity of phosphate occurs if APP is left to “cook” all different chemical properties to assess hydrolysis. Whether hydrolysis is summer in a tank. Poly content is the relative importance of chemical and complete in a few days or weeks, the reduced and sequestered metals may biological influences. They found a process is fast enough to supply plants fall out leaving residue in the tank (and significant chemical contribution to and roots with sufficient cloudy product). And, once the polys hydrolysis rate. All the observed orthophosphate. are hydrolyzed, the product may not be changes could not be attributed solely hosphorus is required for life. It able to sequester added micronutrients to biological factors. Coarse-textured is the main component of ATP— such as zinc. Dilute APP solutions may soils appeared to hydrolyze PP faster Pthe compound essential for hydrolyze to orthophosphate but water than fine. Hons et al. (1986) also found energy transfer. It is part of a myriad of dilution does not appear to accelerate texture to significantly interact with functions. Plants are generally thought the normal hydrolysis process. other factors to influence rate. to consume only the phosphate in the Adding APP to soil is quite a different Significant interactions expressed were: ortho form.