THE LIGHT AND DARK OF VISUAL SIGNAL PROCESSING
Gloria Luo-Li
A thesis submitted in fulfilment of the requirements for the degree of Doctor of Philosophy
Faculty of Medicine and Health The University of Sydney 2020
ii Acknowledgements
Ten years ago, I was approached by a friend who advised me to extend my study in the field of medicine. I was excited about this idea and started exploring the journey.
In 2012, I met Dr Alan Freeman who subsequently supervised my part-time project.
Now, eight years later, my thesis is ready for submission! I knew that saying some general words of gratitude lack weight, however that’s the first and foremost way to express my appreciation. I am profoundly grateful to my supervisor Dr Alan Freeman for his unwavering support, insight and guidance and for his enthusiastic response to, and feedback on, every single step of the development of my project and extracurricular learning. Without the generous contributions of imparting his knowledge and confidence, this thesis would not be.
I sincerely thank my associate supervisor Professor David Alais for his constant assistance by providing his laboratory for some of the experiments. Professor Alais always gives advice and comments positively and confidently to dispel my doubts and encourage me to work things through free of stress. I thank him from the bottom of my heart for his valuable contribution to my first published paper, Chapter 5 in this thesis, and his admirable attitude towards our relationship during the past eight-year research journey.
To the American co-authors of my second published article – Distinguished Professors
Alonso and Zaidi, and Dr Mazade, I thank them for their generosity far above what I asked or expected, by allowing me to use the data from their animal studies. They also made many thoughtful contributions throughout the drafting of Chapter 6. I cannot find the right words to express my endless appreciation to Professor Alonso and his team members who sacrificed their valuable time to support me so well.
iii A special thank you goes to Dr Elaine Wong for her comments on this thesis, for her enthusiasm and generosity of sacrificing her own and family time working on my thesis, especially during the night-times after settling her newborn baby, for which I feel so thoroughly touched.
To all the administrative staff, undergraduate and postgraduate students who participated in the experiments, I cannot thank them enough for being a part of my research. Thank you to Professor Frank Lovicu, Dr Peter Knight, Associate Professor
Fazlul Huq, Dr Elizabeth Hegedus, Dr Jaimie Polson, Dr Darren Reed, Dr Helen
Ritchie, Dr David Mor, and Dr Aaron Camp, who gave encouraging and assertive comments on each of my annual progress review reports. Thank you to Ms Felicia Lim,
Dr Jin Huang, Dr Nastaran Hesam Shariati, Mr Gautham Jayachandran, Mrs Ann
Korabelnikoff, Mrs Helen Ananin, Ms Ruth Rinot, Dr Md Sheikh Anwar, Dr Zaynab
Al-Eisawi, and Dr Munira Al-Dossari, who gave me a helping hand whenever I needed it.
A special thank you to Dr Patrick Lam, General Practitioner, Senior Lecturer and researcher in the field of biomechanics and orthopaedics at UNSW. Dr Lam generously shared his incredible ideas from his reflection on his experience in research and teaching. I thank him for inspiring me, and the time he sacrificed for reading and commenting as I drafted my thesis.
Last, but not least, my heartfelt thanks to my family, especially my two teenage sons, for all your patience and loving encouragement throughout the years. To you, I dedicate this thesis.
iv Brief contents
Acknowledgements ...... iii
Brief contents ...... v
Detailed contents ...... vi
Summary ...... x
Chapter 1. Literature review ...... 1
Chapter 2. Aims ...... 29
Chapter 3. General methods ...... 33
Chapter 4. Pilot study ...... 45
Chapter 5. Responses to light and dark stationary stimuli ...... 59
Chapter 6. Responses to light and dark moving stimuli ...... 73
Chapter 7. Mechanisms underlying motion direction selectivity ...... 83
Chapter 8. Discussion ...... 111
References ...... 118
Publications ...... 128
v
Detailed contents
Acknowledgements ...... iii
Brief contents ...... v
Detailed contents ...... vi
Summary ...... x
Chapter 1. Literature review ...... 1
Visual pathways ...... 1
Overall structure of the visual pathways ...... 1
Retinal structure ...... 3
Major retinal signal processing pathways ...... 4
Centre-surround receptive fields ...... 5
Bipolar cell function ...... 8
Retinal ganglion cell function ...... 10
Lateral geniculate nucleus ...... 11
Cellular structure of the primary visual cortex ...... 12
Cortical receptive fields ...... 14
Conclusion ...... 15
Light/dark response asymmetries ...... 15
Motion sensitivity ...... 17
Neurophysiology of motion sensitivity ...... 17
Subcortical mechanisms ...... 18
Cortical mechanisms ...... 20
vi Mechanisms underlying direction selectivity ...... 26
Chapter 2. Aims ...... 29
Chapter 4 aims ...... 29
Chapter 5 aims ...... 29
Chapter 6 aims ...... 30
Chapter 7 aims ...... 30
Chapter 7 aims ...... 31
Chapter 7 aims ...... 30
Summary …………………………………………………………………………………………………………………….31
Chapter 3. General methods ...... 33
Psychophysics ...... 33
Subjects ...... 33
Equipment ...... 34
Visual stimulus ...... 34
Calibration ...... 37
Electrophysiology ...... 42
Animal surgery and preparation ...... 42
Electrophysiological recordings and data acquisition ...... 43
Visual stimulation and data analysis ...... 44
Chapter 4. Pilot study ...... 45
Abstract ...... 45
Introduction ...... 46
Experiment 1: Detection of light increments and decrements ...... 48
vii Methods ...... 48
Results ...... 49
Discussion ...... 50
Experiment 2: Detection of stimulus location ...... 51
Methods ...... 52
Results ...... 52
Discussion ...... 56
Psychometric function ...... 56
Reaction time ...... 56
Chapter 5. Responses to light and dark stationary stimuli ...... 59
Contributions of authors ...... 59
Chapter 6. Responses to light and dark moving stimuli ...... 73
Contributions of authors ...... 73
Chapter 7. Mechanisms underlying motion direction selectivity ...... 83
Abstract ...... 83
Introduction ...... 84
Methods ...... 85
Animal preparation ...... 85
Electrophysiology recordings and data collection ...... 85
Visual stimuli ...... 87
Results ...... 89
Response latency ………………………………………………………………………………………………………. 89
viii Sparse noise ...... 91
Response time course ...... 91
Receptive field map ...... 95
On-to-off direction ...... 98
Moving bar ...... 101
Comparing preferred and on-to-off direction ...... 107
Discussion ...... 108
A mechanism based on inhibition ...... 109
Chapter 8. Discussion ...... 111
Chapter 5 ...... 112
Chapter 6 ...... 112
Chapter 7 ...... 113
Biological advantage of parallel subcortical pathways ...... 113
Biological advantage of light/dark asymmetries ...... 114
Source of light/dark response asymmetries ...... 115
Methodology ...... 116
Contrast sensitivity……………………………………………………………………………………………116
References ...... 118
Publications ...... 128
Journal paper ...... 128
Abstracts and conference proceedings ...... 128
ix
Summary
Subcortical visual pathways are prominently divided into two types. On-centre neurons respond best to stimuli lighter than the background and off-centre neurons prefer darker stimuli. The convergence of these two pathways at the cortex results in a dramatic change in neuronal properties. Subcortical responses are basically photograph-like, but cortical responses are feature-based: cortical neurons encode features such as contour orientation, motion direction, and depth.
It has recently become clear that off-centre signals are not simply inversions of on- centre signals. Instead, signals in off-dominated cortical neurons are stronger, faster and more prevalent than their on-dominated counterparts. The aim of my thesis was to explore asymmetries of responses to light and dark, and to learn more about the influence of these asymmetries on feature processing. I used two methodologies, human psychophysics and the analysis of cortical neuronal data from a colleague’s laboratory. There are four results chapters.
Chapter 4 establishes and develops the psychophysical methods in two ways. First, it shows that the use of very low contrasts can capture response characteristics that are not appreciable at higher contrasts. Second, I developed an experimental design capable of simultaneously measuring response accuracy and reaction time. This dual approach adds weight to the experimental conclusions.
Chapter 5 psychophysically characterises the dominance of responses to stationary stimuli. I first show that the stimulus is invisible for contrast magnitudes less than about 0.01. This is assumed to result from the resting hyperpolarisation of simple cells.
I then demonstrate that responses to dark stimuli are more accurate and faster than
x are those to light stimuli. This result is modelled by assuming that off-dominant neurons in primary visual cortex have higher contrast sensitivity than do their on- dominant neighbours. Finally, I decomposed gratings into light and dark components and showed that the light component had to be delivered before the dark component to obtain optimal orientation discrimination. This result can be interpreted to mean that responses to dark and light need to arrive at the cortex at about the same time for optimal discrimination.
The focus in Chapter 6 is on moving rather than stationary stimuli. I delivered light and dark moving bars and asked my subjects to indicate motion direction.
Surprisingly, they were more accurate and faster for light than for dark bars. As a check on this result I analysed neuronal data from cat primary visual cortex; these data came from the laboratory of Jose Manuel Alonso. Neuronal responses to moving light bars had lower latency than responses to dark bars of the same contrast magnitude, provided that bar speed was low. Differences were not significant at high speed. The psychophysics and neuronal data are therefore in agreement. The speed advantage for light bars was interpreted in terms of differing contrast-response functions for on- and off-dominated cortical neurons.
Chapter 7, the final results chapter, analyses neuronal responses to explore motion direction selectivity. The hypothesis I tested, which derives from the results in Chapter
6, was that the preferred motion direction of a simple cell is from its on-subfield to its off-subfield. I analysed responses to flashed stationary spots of light and dark to obtain receptive field maps, and predicted preferred direction from the map. I then compared the prediction with measurements made with moving bars. The prediction matched the empirical result for one dataset, but the result was not statistically significant in a
xi second dataset. The evidence for the hypothesis is therefore weak. I discuss an alternative hypothesis at the end of the chapter.
xii
Chapter 1. Literature review
Visual pathways
Overall structure of the visual pathways
Visual input is transmitted from the retina to the lateral geniculate nucleus (or LGN) of the thalamus, and then to the primary visual cortex (V1) (Solomon & Lennie, 2007;
Figure 1.1). The retina is the innermost layer of the eye, which lies in front of the choroid and behind the vitreous body. The retina is described as being a multi-layered tissue containing a number of cell types. While the neural circuitry within the retina is rather complex, the flow of visual information from photoreceptors to the optic nerve is mostly through a series of three neurons: photoreceptor cell to bipolar cell to ganglion cell. Light entering the eye triggers the process of phototransduction within the photoreceptor layer of the retina, which is comprised of rods and cones. The output from these photoreceptor cells travel through the bipolar cells (as well as horizontal cells) until it reaches the retinal ganglion cells.
Retinal ganglion cell axons from all areas of the retina converge at the optic disc and exit the eye along the optic nerve. The retinal ganglion cells are generally divided into two groups, each projecting to one of two portions of the LGN. The majority of retinal ganglion cells project to dorsal LGN, providing information for visual perception. The second projection is to a small group of cells, the pretectum, lying adjacent to the LGN.
These cells provide the basis for other visual functions such as the pupillary light reflex. The initial component of the pupillary light reflex pathway is a bilateral projection from the retina to the pretectum, which in turn, projects to the Edinger-
Westphal nucleus that lies next to the nucleus of the oculomotor nerve in the midbrain.
1 Chapter 1. Literature review
The primate LGN is a six-layered nucleus of the thalamus. Interactions or synapses between the retinal ganglion cells and their corresponding cell layer within the LGN implements the flow of information between the retina and the LGN. This will be detailed in a later section, but in short, there are two paths (or channels) whereby LGN outputs can travel to V1. These channels are known as the parvocellular (P) and magnocellular (M) pathways. Each pathway carries specific qualities of visual information to different areas of V1 (Solomon & Lennie, 2007).
Figure 1.1. Primate visual pathway. The left panel outlines the visual pathway from retina to the primary visual cortex through the lateral geniculate nucleus (LGN). The red line represents the pathway commencing from temporal retina; the green line represents the projections from nasal retina.
The top right figure shows the basic structure of the retina. The axons of ganglion cells form the optic nerve, which carries visual signals from the retina. The lower right figure shows that axons of LGN
2 Visual pathways neurons project predominantly to layer 4 of the primary visual cortex (Figure from Box 1 in Solomon &
Lennie (2007).
Retinal structure
The retina measures 0.2 mm in thickness on average. There are five retinal neurons: photoreceptors, bipolar cells, horizontal cells, amacrine cells and retinal ganglion cells.
The cell bodies and their axons are layered in an alternating fashion, giving it a stratified appearance (Figure 1.2). The cell bodies of the retinal neurons are found in the inner and outer nuclear layers, as well as the ganglion cell layer, while the axons of the neurons and synapses between neurons occupy the inner and outer plexiform layers (Figure 1.2).
Figure 1.2. The retina is made of many types of neurons, which are arranged in layers. This figure is an adaptation of Netter’s drawings published in Felten et al. (2015).
3 Chapter 1. Literature review
The most distal layer of the retina is the pigment epithelium followed by the photoreceptor layer. Both types of photoreceptors consist of an outer and inner segment. The outer segment of the photoreceptor is partially embedded within the pigment epithelium. The pigment epithelium is an important retinal layer that maintains the photoreceptor neurons, and sheds the used portions of their outer segments, which are made of discs containing photosensitive pigments. The inner segment of the photoreceptors consists of the cell body and its synaptic terminal.
Within the outer plexiform layer of the retina, photoreceptor axons synapse with the bipolar cells and horizontal cells. The cell bodies of the bipolar, horizontal and amacrine cells are located in the inner nuclear layer. The processes of the bipolar and amacrine cells synapse with each other and with the retinal ganglion cell dendrites.
The cell bodies of the retinal ganglion cells make up a layer called the ganglion cell layer, and finally, the most proximal layer is the nerve fibre layer consisting of the axons emerging from the retinal ganglion cell soma. These retinal ganglion cell nerve fibres bundle up to form the optic nerve, and the visual information formed within the retina then travels to the remaining sections of the visual pathway (Purves et al., 2017).
Major retinal signal processing pathways
The processing of visual information signals begins within the outer segment of the photoreceptor cells. The light-sensitive pigments contained within the photoreceptor’s membranous discs absorb photons of light. The absorption of light triggers a cascade of chemical events (a process known as phototransduction), which converts electromagnetic stimuli into electrical signals. Electrical signals generated in photoreceptors are passed to bipolar cells located in the outer plexiform layer. The horizontal cells, which are also present in the outer plexiform layer, play a role in modulating signal transmission between photoreceptors and bipolar cells. In
4 Visual pathways particular, horizontal cells allow for lateral interactions between photoreceptors and bipolar cells, so as to increase the spatial contrast of an image and facilitate edge detection. Bipolar cell signals are transmitted to the retinal ganglion cells in the inner plexiform layer. Amacrine cells found in that layer modulate the signal transmission between bipolar and retinal ganglion cells. There are various subtypes of amacrine cells, with various image processing functions such as the signalling of contrast, colour, brightness and movement.
Centre-surround receptive fields
Bipolar and retinal ganglion cells have a rather distinctive receptive field arrangement
(Figure 1.3). A small circular patch of photoreceptors supplies a bipolar cell and a corresponding retinal ganglion cell. Hence the receptive fields of bipolar and retinal ganglion cells are roughly circular, similar to neurons of other sensory systems, but unique in their own way because the receptive fields are concentric, consisting of a central region which is surrounded by a ring (DeAngelis, Anzai, Ohzawa, & Freeman,
1995).
There are two types of bipolar cells, each responding differently to light applied on the centres of their receptive fields. They are called on-centre and off-centre bipolar cells.
An on-centre bipolar cell is one that becomes depolarised (or excited) in the presence of a light stimulus applied to the centre of its receptive field. However, when light is delivered to the surround of an on-centre bipolar cell, the cell becomes hyperpolarised
(or inhibited). The second type of bipolar cell is the off-centre cell, which behaves in the exact opposite way: light on the receptive field centre hyperpolarises (or inhibits) the bipolar cell, while light on the surround depolarises (or excites) the cell.
5 Chapter 1. Literature review
The retinal ganglion cells have two types of receptive fields, similar to bipolar cells.
The first type of receptive field has an on-centre with an off-surround. The second type consists of an off-centre/on-surround. Like bipolar cells, the receptive fields of retinal ganglion cells display centre-surround antagonism. There is a difference, however, between bipolar and retina ganglion cells. Photoreceptors, bipolar cells, horizontal cells, and most amacrine cells have graded postsynaptic signals which can be either depolarising or hyperpolarising; none of these retinal neurons generate action potentials. Retinal ganglion cells are the first cells along the visual pathway that generate action potentials. Therefore, on-centre and off-centre ganglion cells respond by depolarising or hyperpolarising and the magnitude of these changes modulates their firing rate. Rather, retinal ganglion cells respond by increasing or decreasing the frequency with which they discharge action potentials.
6 Visual pathways
Figure 1.3. Contour map of the receptive field of geniculate, simple and complex cell. Note that bipolar cells and retinal ganglion cells have similar circular receptive fields to those of LGN cells. Green and red represent excitatory and inhibitory subfields, respectively (DeAngelis, Ohzawa, & Freeman, 1995).
To illustrate how the concentric receptive fields responds to light, consider an on- centre retinal ganglion cell, which has an on-centre and off-surround (as with the LGN cell in Figure 1.3). When a small spot of light is directed in the central region of the retinal ganglion cell’s receptive fields, the firing rate of the retinal ganglion cell increases from resting levels (when no light is falling on the receptive fields).
Conversely, when the spot of light is presented within the region of the surround, the activity recorded from the on-centre retinal ganglion cell decreases. When the entire central region of the receptive field is illuminated, there is an optimum response from the retinal ganglion cell. The response polarity of bipolar cells depends on the type of
7 Chapter 1. Literature review glutamate receptor expressed (AMPA/KA or mGluR6) at the photoreceptor-bipolar cell synapse. The neurotransmitter is glutamate for both on and off-centre bipolar cells.
If the entire surround is illuminated, there is an opposite effect on the retinal ganglion cell, that is, the retinal ganglion cell is maximally inhibited. When both centre and surround are illuminated, the retinal ganglion cell’s activity rises just above resting levels. This example demonstrates that uniform illumination across the entire receptive fields is not as efficient in increasing the activity of a retinal ganglion cell compared to well-defined spot of light, or a bar of light that passes through the centre of the on-centre retinal ganglion cell’s receptive field. This property accounts for why retinal ganglion cells are sensitive to differences in illumination levels across the receptive fields (luminance contrast).
Bipolar cell function
The responses of on-centre and off-centre bipolar cells vary according to the changes in light intensity. Photoreceptors hyperpolarise in the presence of light; the degree of hyperpolarisation is dependent on light intensity. Hyperpolarisation of photoreceptors decreases the release of neurotransmitter, which may cause depolarisation, or hyperpolarisation of the bipolar cell, depending upon the type of neurotransmitter released at the synapse between photoreceptor and bipolar cell
(Purves et al., 2017). When light is presented on the centre of an on-centre bipolar cell, the photoreceptor becomes hyperpolarised, causing depolarisation of the bipolar cell because of the sign-inverting synapse between them. Excitatory signals from the on- centre bipolar cell causes on-centre ganglion cells to increase their action potential discharge rate (Figure 1.4).
8 Visual pathways
Consider the effect of light shining within the centre of the receptive field of an off- centre bipolar neuron. Again, the first change is hyperpolarisation of the photoreceptor cell, with a subsequent hyperpolarisation of the off-centre bipolar cell due to the excitatory nature of the synapse between the photoreceptor and the off- centre bipolar cell. There is subsequent hyperpolarisation of the off-centre ganglion cell, which decreases its action potential frequency (Figure 1.4).
Figure 1.4. Light stimuli depolarise the on-centre bipolar cell and at the same time hyperpolarise the off-centre bipolar cell, subsequently resulting in vigorous firing of action potentials from the on-centre ganglion cell, and the decline in the action potential firing rate from the off-centre ganglion cell, respectively (Kandel, Schwartz, & Jessell, 2000).
The centre-surround structure of the bipolar cell’s receptive field is transmitted to the ganglion cell via synapses located in the inner plexiform layer, as shown in Figure 1.4.
Some synapses connect on-centre bipolar cells to on-centre ganglion cells, while others connect off-centre bipolar cells to off-centre ganglion cells. The accentuation of
9 Chapter 1. Literature review contrasts by the centre-surround receptive fields of the bipolar cells is thereby preserved and passed on to the ganglion cells, and ultimately to the visual cortex
(Purves et al., 2017). Vision depends on our ability to distinguish contrasts between objects and the backgrounds behind them. The initiation of parallel pathways for visual processing beginning in the retina is one of the mechanisms that make this discrimination possible.
Retinal ganglion cell function
The retinal ganglion cells are important for shape recognition and detecting the movement of objects. In primates, these stimulus properties are processed by two major types of retinal ganglion cells: parvocellular (P) or midget cells, and magnocellular (M) or parasol cells.
Midget ganglion cells, as their name suggests, are small cells that vastly outnumber their parasol ganglion cells counterparts in the retina by about eight times. The axons of midget ganglion cells travel through the optic nerve and tract and are destined for the parvocellular layers of the LGN (Dacey & Petersen, 1992). Midget cells have small dendritic fields and cell bodies. Within the retina, they receive inputs from one to a few cone bipolar cells, which in turn are connected to single cones. These physical properties are the reasons why midget cells are sensitive to colour and have small centre-surround receptive fields. Functionally, the midget cell produces sustained responses to stimuli that are centred in its receptive field and weaker responses when there is stimulus movement. Midget cells are best suited for responding to changes in colour (Dacey & Petersen, 1992).
Compared to midget cells, parasol ganglion cells have larger dendritic trees and cell bodies. They make up about 10% of the retinal ganglion cell population, and travel
10 Visual pathways within the optic nerve and tract to the LGN where they terminate in the magnocellular layers of the LGN. Within the retina, parasol cells receive synaptic inputs from a relatively large numbers of bipolar cells, which are in turn connected to numerous rods and cones. Hence, parasol cells do not possess colour-sensitive properties. They do, however, have large concentric receptive fields and conduct neural signals faster. This enables parasol cells to convey motion signals and to be more sensitive to low-contrast stimuli.
Lateral geniculate nucleus
The LGN is a nucleus located within the ventral aspect of thalamus that receives the majority of optic tract fibres. Information that the LGN received from the retinal ganglion cells is then passed on to the primary visual cortex, from which the LGN also receives significant feedback. The LGN is a laminated structure with six principal layers of cells. The largest LGN cells make up the innermost two layers (i.e. layers 1 and 2, known as the magnocellular layers), while smaller cells form the outermost four layers (i.e. layers 3, 4, 5, and 6, known as the parvocellular layers) (Purves et al., 2017).
There are also thin layers of the smallest cells (called koniocellular neurons) that are interposed between the six principal layers. The optic tract fibres from each eye synapse in different layers of the LGN. As a result, each LGN neuron responds to stimulation of one eye only (Hubel & Wiesel, 1961; Reid & Alonso, 1995), as shown in
Figure 1.5.
The functional properties of LGN neurons are similar to those of retinal ganglion cells by way of association. Midget retinal ganglion cells project to the parvocellular layers of the LGN and synapse with the cells located there (pLGN cells). Since pLGN cells process inputs from midget retinal ganglion cells, their properties are similar: pLGN
11 Chapter 1. Literature review cells are colour-sensitive and have small centre-surround receptive fields, hence they are best suited for detecting fine detail (Martinez et al., 2005). Parasol cells synapse with the neurons of the magnocellular layers (mLGN cells). Like parasol cells, mLGN cells have relatively large receptive fields and are colour-insensitive. They respond well to movement of visual stimuli (Purves et al., 2017). The third group of LGN neurons are the koniocellular cells (kLGN cells). Koniocellular cells receive inputs from midget retinal ganglion cells of the retina. kLGN cells show sensitivity particularly to information derived from short-wavelength-sensitive cones (Martin,
White, Goodchild, Wilder, & Sefton, 1997). The axons of these different types of LGN neurons terminate in different layers or sublayers of the primary visual cortex (V1).
Cellular structure of the primary visual cortex
Like the other parts of the neocortex, the visual cortex is a horizontally stratified structure consisting of six layers, labelled layers I to VI (Figure 1.1). The type of neurons distinguishes each layer from the next, and each layer is specialised in either receiving or sending neural information. Layer IV, for example, contains numerous stellate cells, described as being small-sized neurons with dendrites that radiate out around the cell body, and which specialises largely in receiving connections from the
LGN. In the primary visual cortex, layer IV is divided into three sublayers designated
IVA, IVB, and IVC. Layer IVC is further subdivided into IVCα and IVCβ. Output axons from the LGN transmit information from the eye along various pathways that project mainly into layer IVC.
12 Visual pathways
Figure 1.5. The magnocellular and parvocellular pathways in LGN. Midget ganglion cells synapse with small parvocellular LGN cells, while parasol ganglion cells synapse with large magnocellular cells of the LGN. These form the parvocellular (P) and magnocellular (M) pathways, respectively. They play an important role in the visual perception of colour, motion, and other fine details of stimuli (Kandel et al., 2000).
In addition to the horizontal stratification of the visual cortex, the cortex is also divided into vertical columns in which all the neurons respond to the same characteristic (for
13 Chapter 1. Literature review example, colour, contrast, ocular dominance, movement and orientation) of a given portion in the visual field. The columns thus form functional units that run perpendicular to the surface of the cortex.
Cortical receptive fields
Unlike the neurons of the retinal ganglion layer or the LGN, the receptive fields of the neurons of the primary visual cortex are not circular, but rather rectangular in shape
(Jones & Palmer, 1987; Martinez et al., 2005) (Figure 1.3). These rectangular receptive fields have on-subfields that respond actively to light, flanked by off-subfields that respond to darkness (Hubel & Wiesel, 1959).
A beam of light, which is not oriented precisely parallel to the boundary between on- and off-subfields, is simply not effective for the neuron. Thus, these types of neurons respond particularly well to stimuli that are oriented in a specific direction, and they are called simple cells (Hubel & Wiesel, 1962). The simple cell receptive fields are thought to be the result of the convergence of several adjacent circular receptive fields of cells in LGN. Since most output neurons from the LGN project to layer IV of the primary visual cortex, the cells in layer IV are mainly simple cells (Tanaka, 1983). Other cells in the primary visual cortex outside of layer IV have complex receptive fields: they are orientation selective but relatively insensitive to stimulus location (Hubel &
Wiesel, 1962).
Inputs from many simple cells converge on a complex cell (Hubel & Wiesel, 1961;
Hubel & Wiesel, 1965). These simple cells convey information about the same orientation, from overlapping receptive fields spread across the whole receptive field of the complex cell. Therefore, complex cells have large receptive fields, which are lacking in clear subfields of excitatory and inhibitory regions (Martinez et al., 2005)
14 Visual pathways
(Figure 1.3). Simple and complex cells are direction selective. They are excited by a moving edge that displays a specific orientation and moving in a specific direction of motion.
Conclusion
I conclude that visual information is processed in various stages from the retinal ganglion cells, to LGN cells, and to the simple and complex cells of the visual cortex.
At every stage, each cell is able to process more complex detail than the level below it, such that the cells at the higher stages are most capable in breaking down a visual image into features, which are the building blocks of object recognition.
Light/dark response asymmetries
Early studies of the subcortical visual system assumed that the responses of on- and off-centre neurons were of equal magnitude and opposite in sign. Some of the first indications of on/off asymmetry came from psychophysics. Krauskopf (1980) delivered both incremental and decremental light pulses to human subjects and found that their sensitivity was higher in the latter case. Bowen, Pokorny, and Smith (1989) stimulated their subjects with mirror-image sawtooth temporal waveforms and found higher contrast sensitivity for rapid-off than for rapid-on waveforms. Visual evoked potentials supported these findings: Zemon, Gordon, and Welch (1988) presented both positive- and negative-contrast checkerboard stimuli to human subjects and found higher contrast gain for negative contrasts. These results all indicate stronger visual responses to stimuli darker than the background compared with responses to light stimuli.
15 Chapter 1. Literature review
Cortical electrophysiology provided further evidence for this asymmetry. Jin et al.
(2008) found that on- and off-centre geniculate afferents tend to segregate in cat primary visual cortex and that the cortical region representing the central area of retina is dominated by off-centre inputs (Jin et al., 2008). Yeh, Xing, and Shapley (2009) recorded single-unit activity in monkey primary visual cortex and found that dark- dominated neurons substantially outnumbered light-dominated neurons in layer 2 and 3 but the numbers were similar in the input layer 4C: see Figure 1.6. They therefore concluded that dark dominance arises cortically. Xing, Yeh, and Shapley (2010) refined this result by finding a small preference for dark-dominant cells in layer 4Cb, the layer that receives parvocellular input.
Figure 1.6. The frequency distributions of on/off ratio showed interlaminar differences. The figure shows the percentages of off-dominant neurons and light-dominant neurons in different layers of V1.
A large number of neurons in layer 2/3 showed stronger responses to dark than light, while in layer 4c and 4a/b the difference was of weaker significance (Yeh et al., 2009).
14 Light/dark response asymmetries
Responses to darks have an advantage over those to lights not only in response magnitude but also in timing. Jin, Wang, Lashgari, Swadlow, and Alonso (2011) found that inputs to cat primary visual cortex from off-centre geniculate neurons arrive 3-6 ms before on-centre inputs (Figure 1.7). Further, off-dominated cortical cells responded about 3 ms before their on-dominated neighbours (Komban et al., 2014).
The speed advantage for dark stimuli has been confirmed psychophysically. Komban,
Alonso, and Zaidi (2011) asked subjects to indicate the number of dark or light squares presented against a patterned background. Reaction time was lower for dark stimuli.
Komban et al. (2014) presented dark and light stimuli with a variable delay between them. Subjects responded faster, by 6-14 ms, when dark stimuli were presented first.
Figure 1.7. Distributions of response latency and peak time in cat LGN. The upper graph shows off- centre geniculate cells have shorter response latency (~4ms) than on-cells. The response peak in off-
15 Chapter 1. Literature review centre cells is ~3 ms faster than for on-cells, as shown in the lower graph (Jin, Wang, Lashgari, et al.,
2011).
Another type of on/off asymmetry has recently been reported, this time in the contrast-response function. Kremkow et al. (2014) presented spots of light or dark against a grey background and recorded from both LGN and cortical neurons in cats.
Dark spots produced a response that grew almost linearly with spot luminance but for light spots, the contrast-response function was compressive, saturating at higher luminances. It should be noted, however, that both luminance and response axes were normalised, making it difficult to compare sensitivities for small luminance changes.
It has recently been shown that on/off asymmetries play a role in the spatial organisation of primary visual cortex. Using long horizontal penetrations of cortex,
Kremkow, Jin, Wang, and Alonso (2016) showed that off-dominance did not vary across ocular dominance columns, and that off- and on-dominance were negatively corelated when ocular dominance was constant. They concluded that the axis along which on/off dominance varies is spatially orthogonal to the axis with varying ocular dominance. They also found that simple cell off-subfields varied smoothly in visual field location across any penetration. The on-subfield, however, tended to vary in position around the off-subfield. Lee, Huang, and Fitzpatrick (2016), who recorded from tree shrew cortex using calcium imaging, corroborated this last result.
The origin of on/off asymmetries is controversial. It has been suggested that the asymmetry originates at the synapse between photoreceptors and bipolar cells (Jin,
Wang, Swadlow, & Alonso, 2011). The synapse with on- and off-bipolars is metabotropic and ionotropic, respectively, and the former is known to be slower. On- centre retinal ganglion cells in the primate, however, have been shown to respond faster than their off-centre neighbours (Chichilnisky & Kalmar, 2002), casting doubt
16 Light/dark response asymmetries on a retinal origin. A different retinal source for the asymmetry is ganglion cell density: off-cells are slightly more numerous than on-cells (Wässle, Boycott, & Illing, 1981), giving them a potential advantage. The finding by Yeh et al. (2009) of dark-dominance in monkey cortical layers 2 and 3, but not in the input layer, is suggestive of a cortical origin for the asymmetry. But this cannot be true in the cat because geniculocortical inputs are dark-dominated in that species (Jin et al., 2008). Given these mixed results, the source of on/off asymmetries remains to be determined.
Motion sensitivity
Neurophysiology of motion sensitivity
All visual neurons respond to a changing pattern of light on the retina, including that produced by a moving stimulus. Some neurons have a property, motion direction selectivity, that allows them to distinguish motion from dynamic stationary stimuli.
This selectivity means that they respond best to motion in a specific direction and less to other directions. Direction selectivity was first described in the cat’s primary visual cortex (Hubel & Wiesel, 1959) as illustrated in Figure 1.8. Since then direction selectivity has been found in a number of other species, including rabbit (Barlow, Hill,
& Levick, 1964), monkey (Hubel & Wiesel, 1968), mouse (Yoshida et al., 2001) and fly
(Single & Borst, 1998). The origin of direction selectivity, however, differs between species. Direction selective neurons are found in the retina of flies, rabbits and mice.
By contrast, the direction selectivity seen in cat and monkey cortex originates cortically. The following describes mechanisms underlying direction selectivity, first subcortically and then in cortex.
17 Chapter 1. Literature review
Subcortical mechanisms
Rabbit and mouse
Barlow et al. (1964) were the first to describe direction-selective retinal ganglion cells in the rabbit. Barlow and Levick (1965) performed a variety of experiments with the aim of finding the mechanisms underlying the direction selectivity. In their key experiment, cells were stimulated with two bars of light at different receptive field locations. The response when the bars were presented sequentially in the antipreferred direction (that is, the opposite to the preferred direction) was less than the sum of the responses when the bars were presented singly. Barlow et al. (1964) therefore reasoned that the antipreferred response was less than the preferred because of inhibition. Their model included inhibition in the antipreferred direction, with a delay to increase its effectiveness.
18 Motion sensitivity
Figure 1.8. Responses from a neuron in cat primary visual cortex. A bar of light was moved in a variety of directions across the receptive field (left column). The neuron responds best to a specific orientation and motion direction (right column) (Hubel & Wiesel, 1959).
The subsequent search for the origin of retinal direction selectivity focussed on the starburst amacrine cell. This cell has a radially symmetric dendritic tree that receives bipolar cell input over the whole tree (Vaney & Taylor, 2002). Only the distal parts of the tree contact ganglion cells. Immuno-ablation of mouse starburst amacrines abolishes direction selectivity in ganglion cells, suggesting that the amacrines are responsible for the selectivity (Yoshida et al., 2001). Borg-Graham and Grzywacz
(1992) proposed that distal dendrites respond better to motion away from the cell body than towards it. Selective connections of the amacrine to a ganglion cell could then generate direction selectivity.
More recent work has provided support for this idea. Euler, Detwiler, and Denk (2002) used two-photon calcium imaging to show that the release site on an amacrine cell dendrite prefers centrifugal motion over centripetal motion. Briggman, Helmstaedter, and Denk (2011) showed that ganglion cells receive inhibition primarily from amacrine cell dendrites whose centrifugal direction matches the antipreferred direction of the ganglion cell. How does direction selectivity arise in an amacrine cell dendrite? One suggestion is that dendritic cable properties augment summation in the centrifugal direction (Vlasits et al., 2016) but there are other possibilities (Mauss, Vlasits, Borst, &
Feller, 2017). Another model for amacrine cell direction selectivity relies on the spatial and temporal offsets of on- and off- bipolar cell inputs (Mauss et al., 2017). These alternatives continue to be tested. The end result is that direction-selective ganglion cells respond to both onset and offset of light in addition to their direction selectivity.
19 Chapter 1. Literature review
Fly
As in rabbits and mice, the anatomical origin of motion direction selectivity in flies has been found. The fly optic lobe has five layers: photoreceptors, lamina, medulla, lobula and lobula plate. Neurons can be divided into on- and off-varieties, and direction selectivity arises independently for each contrast polarity. For on-channels, medulla neurons Mi1 and Tm3, which are not direction selective (Behnia, Clark, Carter,
Clandinin, & Desplan, 2014), synapse onto T4 neurons in the lobula plate, which have been shown to be direction selective (Joesch, Schnell, Raghu, Reiff, & Borst, 2010).
Selectivity arises in T4’s dendrites but the mechanism is uncertain (Mauss et al., 2017).
A similar circuit exists for the off-neuron T5. T4 and T5, which have relatively small receptive fields then converge onto the wide-field tangential cell.
Cortical mechanisms
There are subcortical direction-selective neurons in the cat (Cleland & Levick, 1974) but they project almost exclusively to the brainstem (Fukuda & Stone, 1974). Instead, cortical direction selectivity in carnivores and primates arises in visual cortex itself.
This direction selectivity was first described more than fifty years ago (Hubel &
Wiesel, 1962), but the mechanisms that underlie it are still unknown. In what follows
I will describe some of the characteristics of cortical direction selectivity and some of the hypotheses about its mechanism.
The direction selectivity of a cortical neuron can be well described with a plot of response magnitude versus stimulus direction. Two types of plots are commonly used. A Cartesian plot, illustrated in Figure 7.11 shows direction and response on the horizontal and vertical axes, respectively. This plot has two peaks, with the higher
20 Motion sensitivity peak at the preferred direction. Polar plots represent stimulus direction by the angle from the horizontal axis and response by radial distance.
A convenient metric, the direction selectivity index, can be calculated from plots such as these. Two forms have typically been used for the index