Memory of Chirality: a Strategy for Asymmetric Synthesis
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A Reminder… Chirality: a Type of Stereoisomerism
A Reminder… Same molecular formula, isomers but not identical. constitutional isomers stereoisomers Different in the way their Same connectivity, but different atoms are connected. spatial arrangement. and trans-2-butene cis-2-butene are stereoisomers. Chirality: A Type of Stereoisomerism Any object that cannot be superimposed on its mirror image is chiral. Any object that can be superimposed on its mirror image is achiral. Chirality: A Type of Stereoisomerism Molecules can also be chiral or achiral. How do we know which? Example #1: Is this molecule chiral? 1. If a molecule can be superimposed on its mirror image, it is achiral. achiral. Mirror Plane of Symmetry = Achiral Example #1: Is this molecule chiral? 2. If you can find a mirror plane of symmetry in the molecule, in any achiral. conformation, it is achiral. Can subject unstable conformations to this test. ≡ achiral. Finding Chirality in Molecules Example #2: Is this molecule chiral? 1. If a molecule cannot be superimposed on its mirror image, it is chiral. chiral. The mirror image of a chiral molecule is called its enantiomer. Finding Chirality in Molecules Example #2: Is this molecule chiral? 2. If you cannot find a mirror plane of symmetry in the molecule, in any conformation, it is chiral. chiral. (Or maybe you haven’t looked hard enough.) Pharmacology of Enantiomers (+)-esomeprazole (-)-esomeprazole proton pump inhibitor inactive Prilosec: Mixture of both enantiomers. Patent to AstraZeneca expired 2002. Nexium: (+) enantiomer only. Process patent coverage to 2007. More examples at http://z.umn.edu/2301drugs. (+)-ibuprofen (-)-ibuprofen (+)-carvone (-)-carvone analgesic inactive (but is converted to spearmint oil caraway oil + enantiomer by an enzyme) Each enantiomer is recognized Advil (Wyeth) is a mixture of both enantiomers. -
Influence of Chirality on the Electromagnetic Wave Electrical and Computer Engineering
Influence of Chirality on the Electromagnetic Wave Propagation: Unbounded Media And Chirowaveguides Priyá Dilipa Gaunço Dessai Dissertation submitted to obtain the Master Degree in Electrical and Computer Engineering Jury President: Professor José Manuel Bioucas Dias Supervisor: Professor Carlos Manuel dos Reis Paiva Co- Supervisor: Professor António Luís da Silva Topa Member Professor Sérgio de Almeida Matos December 2011 Abstract When a chiral medium interacts with the polarization state of an electromag- netic plane wave and couples selectively with either the left or right circularly polarized component, we call this property the optical activity. Since the beginning of the 19th century, the study of complex materials has intensied, and the chiral and bi-isotropic (BI) media have generated one of the most interesting and challenging subjects in the electromagnetic research groups in terms of theoretical problems and potential applications. This dissertation addresses the theoretical interaction between waves and the chiral media. From the study of chiral structures it is possible to observe the eect of the polarization rotation, the propagation modes and the cuto frequencies. The reection and transmission coecients between a simple isotropic media (SIM) and chiral media are also analyzed, as well as the relation between the Brewster angle and the chiral parameter. The BI planar structures are also analyzed for a closed guide, the parallel-plate chirowaveguide, and for a semi-closed guide, the grounded chiroslab. From these structures -
Locally Enhanced and Tunable Optical Chirality in Helical Metamaterials
hv photonics Article Locally Enhanced and Tunable Optical Chirality in Helical Metamaterials Philipp Gutsche 1,*, Raquel Mäusle 1 and Sven Burger 1,2 1 Zuse Institute Berlin, Takustr. 7, 14195 Berlin, Germany; [email protected] (R.M.); [email protected] (S.B.) 2 JCMwave GmbH, Bolivarallee 22, 14050 Berlin, Germany * Correspondence: [email protected]; Tel.: +49-30-841-85-203 Received: 31 October 2016; Accepted: 18 November 2016; Published: 23 November 2016 Abstract: We report on a numerical study of optical chirality. Intertwined gold helices illuminated with plane waves concentrate right and left circularly polarized electromagnetic field energy to sub-wavelength regions. These spots of enhanced chirality can be smoothly shifted in position and magnitude by varying illumination parameters, allowing for the control of light-matter interactions on a nanometer scale. Keywords: metamaterials; optical chirality; computational nano-optics 1. Introduction Helical metamaterials strongly impact the optical response of incident circularly (CPL) and linearly polarized light. They serve as efficient circular polarizers [1] and are candidates for chiral near-field sources [2]. Both, advancement of fabrication techniques [3–5] and design which employs fundamental physical properties [6] have significantly increased the performance of these complex structures. Most experimental, numerical and theoretical studies focus on the far-field response of helical metamaterials. Nevertheless, near-field interaction of light and chiral matter is expected to be enhanced in chiral near-fields. Recently, the quantity of optical chirality has been introduced quantifying this phenomenon [7]. In the weak-coupling regime, the interplay of electromagnetic fields and chiral molecules, which are not superimposable with their mirror image, is directly proportional to this near-field measure [8]. -
Chirality in Chemical Molecules
Chirality in Chemical Molecules. Molecules which are active in human physiology largely function as keys in locks. The active molecule is then called a ligand and the lock a receptor. The structures of both are highly specific to the degree that if one atom is positioned in a different position than that required by the receptor to be activated, then no stimulation of the receptor or only partial activation can take place. Again in a similar fashion if one tries to open the front door with a key that looks almost the same than the proper key for that lock, one will usually fail to get inside. A simple aspect like a lengthwise groove on the key which is on the left side instead of the right side, can mean that you can not open the lock if your key is the “chirally incorrect” one. The second aspect to understand is which molecules display chirality and which do not. The word chiral comes from the Greek which means “hand-like”. Our hands are mirror images of each other and as such are not identical. If they were, then we would not need a right hand and left hand glove. We can prove that they are not identical by trying to lay one hand on top of the other palms up. When we attempt to do this, we observe that the thumbs and fingers do not lie on top of one another. We say that they are non-super imposable upon one another. Since they are not the same and yet are mirror images of each other, they are said to exhibit chirality. -
Chapter 4: Stereochemistry Introduction to Stereochemistry
Chapter 4: Stereochemistry Introduction To Stereochemistry Consider two of the compounds we produced while finding all the isomers of C7H16: CH3 CH3 2-methylhexane 3-methylhexane Me Me Me C Me H Bu Bu Me Me 2-methylhexane H H mirror Me rotate Bu Me H 2-methylhexame is superimposable with its mirror image Introduction To Stereochemistry Consider two of the compounds we produced while finding all the isomers of C7H16: CH3 CH3 2-methylhexane 3-methylhexane H C Et Et Me Pr Pr 3-methylhexane Me Me H H mirror Et rotate H Me Pr 2-methylhexame is superimposable with its mirror image Introduction To Stereochemistry Consider two of the compounds we produced while finding all the isomers of C7H16: CH3 CH3 2-methylhexane 3-methylhexane .Compounds that are not superimposable with their mirror image are called chiral (in Greek, chiral means "handed") 3-methylhexane is a chiral molecule. .Compounds that are superimposable with their mirror image are called achiral. 2-methylhexane is an achiral molecule. .An atom (usually carbon) with 4 different substituents is called a stereogenic center or stereocenter. Enantiomers Et Et Pr Pr Me CH3 Me H H 3-methylhexane mirror enantiomers Et Et Pr Pr Me Me Me H H Me H H Two compounds that are non-superimposable mirror images (the two "hands") are called enantiomers. Introduction To Stereochemistry Structural (constitutional) Isomers - Compounds of the same molecular formula with different connectivity (structure, constitution) 2-methylpentane 3-methylpentane Conformational Isomers - Compounds of the same structure that differ in rotation around one or more single bonds Me Me H H H Me H H H H Me H Configurational Isomers or Stereoisomers - Compounds of the same structure that differ in one or more aspects of stereochemistry (how groups are oriented in space - enantiomers or diastereomers) We need a a way to describe the stereochemistry! Me H H Me 3-methylhexane 3-methylhexane The CIP System Revisited 1. -
Chirality and Enantiomers
16.11.2010 Bioanalytics Part 5 12.11.2010 Chirality and Enantiomers • Definition: Optical activity • Properties of enantiomers • Methods: – Polarimetry – Circular dichroism • Nomenclature • Separation of enantiomers • Determination of enantiomeric excess (ee) Determination of absolute configuration • Enantiomeric ratio (E‐value) 1 16.11.2010 Definitions Enantiomers: the two mirror images of a molecule Chirality: non‐superimposable mirror‐images •Depends on the symmetry of a molecule •Point‐symmetry: asymmetric C, Si, S, P‐atoms •Helical structures (protein α‐helix) Quarz crystals snail‐shell amino acids Properties of Enantiomers – Chemical identical – Identical UV, IR, NMR‐Spectra – Differences: • Absorption and refraction of circular polarized light is different – Polarimetry, CD‐spectroscopy • Interaction with other chiral molecules/surfaces is different – Separation of enantiomers on chiral columns (GC, HPLC) 2 16.11.2010 Chiral compounds show optical activity A polarimeter is a device which measures the angle of rotation by passing polarized light through an „optical active“ (chiral) substance. Interaction of light and matter If light enters matter, its intensity (amplitude), polarization, velocity, wavelength, etc. may alter. The two basic phenomena of the interaction of light and matter are absorption (or extinction) and a decrease in velocity. 3 16.11.2010 Interaction of light and matter Absorption means that the intensity (amplitude) of light decreases in matter because matter absorbs a part of the light. (Intensity is the square of amplitude.) Interaction of light and matter The decrease in velocity (i.e. the slowdown) of light in matter is caused by the fact that all materials (even materials that do not absorb light at all) have a refraction index, which means that the velocity of light is smaller in them than in vacuum. -
Download Author Version (PDF)
Chemical Science Accepted Manuscript This is an Accepted Manuscript, which has been through the Royal Society of Chemistry peer review process and has been accepted for publication. Accepted Manuscripts are published online shortly after acceptance, before technical editing, formatting and proof reading. Using this free service, authors can make their results available to the community, in citable form, before we publish the edited article. We will replace this Accepted Manuscript with the edited and formatted Advance Article as soon as it is available. You can find more information about Accepted Manuscripts in the Information for Authors. Please note that technical editing may introduce minor changes to the text and/or graphics, which may alter content. The journal’s standard Terms & Conditions and the Ethical guidelines still apply. In no event shall the Royal Society of Chemistry be held responsible for any errors or omissions in this Accepted Manuscript or any consequences arising from the use of any information it contains. www.rsc.org/chemicalscience Page 1 of 4 PleaseChemical do not adjust Science margins Chemical Science EDGE ARTICLE Absolute Structure Determination of Compounds with Axial and Planar Chirality Using the Crystalline Sponge Method a a a b a Received 00th January 20xx, Shota Yoshioka, Yasuhide Inokuma, Manabu Hoshino, Takashi Sato, and Makoto Fujita* Accepted 00th January 20xx The absolute stereochemistry of compounds with axial and planar chirality is successfully determined by the crystalline DOI: 10.1039/x0xx00000x sponge method without crystallization or derivatization of the compounds. This method is applied to absolute structure determination in the asymmetric synthesis of unique compounds with axial and planar chirality. -
Synthesis of Axially Chiral Biaryl Compounds by Asymmetric Catalytic Reactions with Transition Metals Pauline Loxq, E
Synthesis of axially chiral biaryl compounds by asymmetric catalytic reactions with transition metals Pauline Loxq, E. Manoury, Rinaldo Poli, Éric Deydier, A. Labande To cite this version: Pauline Loxq, E. Manoury, Rinaldo Poli, Éric Deydier, A. Labande. Synthesis of axially chiral biaryl compounds by asymmetric catalytic reactions with transition metals. Coordination Chemistry Re- views, Elsevier, 2016, 308, Part 2, pp.131-190. 10.1016/j.ccr.2015.07.006. hal-01929757 HAL Id: hal-01929757 https://hal.archives-ouvertes.fr/hal-01929757 Submitted on 1 Mar 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Synthesis of axially chiral biaryl compounds by asymmetric catalytic reactions with transition metals Pauline Loxq, a,b Eric Manoury,a,b Rinaldo Poli,a,b,c Eric Deydier a,b,d,* and Agnès Labande a,b,* a CNRS, LCC (Laboratoire de Chimie de Coordination), 205 route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France. b Université de Toulouse, UPS, INPT, F-31077 Toulouse Cedex 4, France. c Institut Universitaire de France, 103, bd Saint-Michel, 75005 Paris, France. d IUT A Paul Sabatier, Departement de Chimie, Avenue Georges Pompidou, CS 20258, F- 81104 Castres Cedex, France Dedicated to the memory of our colleague and friend Guy Lavigne (1947-2015). -
The Power of Crowding for the Origins of Life
Orig Life Evol Biosph (2014) 44:307–311 DOI 10.1007/s11084-014-9382-5 ORIGIN OF LIFE The Power of Crowding for the Origins of Life Helen Greenwood Hansma Received: 2 October 2014 /Accepted: 2 October 2014 / Published online: 14 January 2015 # Springer Science+Business Media Dordrecht 2015 Abstract Molecular crowding increases the likelihood that life as we know it would emerge. In confined spaces, diffusion distances are shorter, and chemical reactions produce fewer and more regular products. Crowding will occur in the spaces between Muscovite mica sheets, which has many advantages as a site for life’s origins. Keywords Muscovite mica . Molecular crowding . Origin of life . Mechanochemistry. Abiogenesis . Chemical confinement effects . Chirality. Protocells Cells are crowded. Protein molecules in cells are typically so close to each other that there is room for only one protein molecule between them (Phillips, Kondev et al. 2008). This is nothing like a dilute ‘prebiotic soup.’ Therefore, by analogy with living cells, the origins of life were probably also crowded. Molecular Confinement Effects Many chemical reactions are limited by the time needed for reactants to diffuse to each other. Shorter distances speed up these reactions. Molecular complementarity is another principle of life in which pairs or groups of molecules form specific interactions (Root-Bernstein 2012). Current examples are: enzymes & substrates & cofactors; nucleic acid base pairs; antigens & antibodies; nucleic acid - protein interactions. Molecular complementarity is likely to have been involved at life’s origins and also benefits from crowding. Mineral surfaces are a likely place for life’s origins and for formation of polymeric molecules (Orgel 1998). -
Chapter 8. Chiral Catalysts José M
Chapter 8. Chiral Catalysts José M. Fraile, José I. García, José A. Mayoral 1. The Origin of Enantioselectivity in Catalytic Processes: the Nanoscale of Enantioselective Catalysis. Enantiomerically pure compounds are extremely important in fields such as medicine and pharmacy, nutrition, or materials with optical properties. Among the different methods to obtain enantiomerically pure compounds, asymmetric catalysis1 is probably the most interesting and challenging, in fact one single molecule of chiral catalyst can transfer its chiral information to thousands or even millions of new chiral molecules. Enantioselective reactions are the result of the competition between different possible diastereomeric reaction pathways, through diastereomeric transition states, when the prochiral substrate complexed to the chiral catalyst reacts with the corresponding reagent. The efficiency of the chirality transfer, measured as enantiomeric excess [% ee = (R−S)/(R+S) × 100], depends on electronic and steric factors in a very subtle form. A simple calculation shows that differences in energy of only 2 kcal/mol between these transition states are enough to obtain more than 90% ee, and small changes in any of the participants in the catalytic process can modify significantly this difference in energy. Those modifications may occur in the near environment of the catalytic centre, at less than 1 nm scale, but also at longer distances in the catalyst, substrate, reagent, solvent, or support in the case of immobilized catalysts. This is the reason because asymmetric -
[2.2]Paracyclophane-Based Bisoxazoline Ligands and Their
molecules Communication PlanarCommunication Chiral [2.2]Paracyclophane-Based Bisoxazoline LigandsPlanar Chiral and Their [2.2]Paracyclophane-Based Applications in Cu-Mediated Bisoxazoline N–H InsertionLigands and Reaction Their Applications in Cu-Mediated N–H Insertion1, Reaction1, 1 2 1,3, Daniel M. Knoll y , Yuling Hu y, Zahid Hassan , Martin Nieger and Stefan Bräse * 1 DanielInstitute M. ofKnoll Organic 1,†, Yuling Chemistry Hu (IOC),1,†, Zahid Karlsruhe Hassan Institute 1, Martin of Nieger Technology 2 and (KIT), Stefan Fritz-Haber-Weg Bräse 1,3,* 6, 76131 Karlsruhe, Germany; [email protected] (D.M.K.); [email protected] (Y.H.); 1 [email protected] Institute of Organic Chemistry (Z.H.) (IOC), Karlsruhe Institute of Technology (KIT), Fritz-Haber-Weg 6, 76131 2 DepartmentKarlsruhe, Germany; of Chemistry, [email protected] University of Helsinki, (D.M.K.); P.O. [email protected] Box 55 A.I. Virtasen aukio (Y.H.); 1, 00014 Helsinki, Finland; martin.nieger@helsinki.fi[email protected] (Z.H.) 2 3 Institute Department of Toxicology of Chemistry, and University Genetics (ITG), of Helsinki, Karlsruhe P.O. InstituteBox 55 A.I. of Virtasen Technology aukio (KIT), 1, 00014 Helsinki, Hermann-von-Helmholtz-PlatzFinland; [email protected] 1, D-76344 Eggenstein-Leopoldshafen, Germany 3 * Correspondence: Institute of Toxicology [email protected]; and Genetics Tel.: (ITG),+49-7216-084-2902 Karlsruhe Institute of Technology (KIT), Hermann-von- TheseHelmholtz-Platz authors contributed 1, D-76344 equally Eggenstein-Leopoldshafen, to this work. Germany. y * Correspondence: [email protected]; Tel.: +49-7216-084-2902 † These authors contributed equally to this work. -
Chiral Metamaterials: Simulations and Experiments
HOME | SEARCH | PACS & MSC | JOURNALS | ABOUT | CONTACT US Chiral metamaterials: simulations and experiments This article has been downloaded from IOPscience. Please scroll down to see the full text article. 2009 J. Opt. A: Pure Appl. Opt. 11 114003 (http://iopscience.iop.org/1464-4258/11/11/114003) The Table of Contents and more related content is available Download details: IP Address: 139.91.179.8 The article was downloaded on 10/11/2009 at 12:27 Please note that terms and conditions apply. IOP PUBLISHING JOURNAL OF OPTICS A: PURE AND APPLIED OPTICS J. Opt. A: Pure Appl. Opt. 11 (2009) 114003 (10pp) doi:10.1088/1464-4258/11/11/114003 REVIEW ARTICLE Chiral metamaterials: simulations and experiments Bingnan Wang1, Jiangfeng Zhou1, Thomas Koschny1,2,3, Maria Kafesaki2,3 and Costas M Soukoulis1,2,3 1 Ames Laboratory and Department of Physics and Astronomy, Iowa State University, Ames, IA 50011, USA 2 Institute of Electronic Structure and Laser, FORTH, Heraklion, Crete, 71110, Greece 3 Department of Materials Science and Technology, University of Crete, Heraklion, Crete, 71110, Greece E-mail: [email protected] Received 20 February 2009, accepted for publication 6 May 2009 Published 16 September 2009 Online at stacks.iop.org/JOptA/11/114003 Abstract Electromagnetic metamaterials are composed of periodically arranged artificial structures. They show peculiar properties, such as negative refraction and super-lensing, which are not seen in natural materials. The conventional metamaterials require both negative and negative μ to achieve negative refraction. Chiral metamaterial is a new class of metamaterials offering a simpler route to negative refraction.