Northern Cavefish (Amblyopsis Spelaea)
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Amblyopsidae, Amblyopsis)
A peer-reviewed open-access journal ZooKeys 412:The 41–57 Hoosier(2014) cavefish, a new and endangered species( Amblyopsidae, Amblyopsis)... 41 doi: 10.3897/zookeys.412.7245 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research The Hoosier cavefish, a new and endangered species (Amblyopsidae, Amblyopsis) from the caves of southern Indiana Prosanta Chakrabarty1,†, Jacques A. Prejean1,‡, Matthew L. Niemiller1,2,§ 1 Museum of Natural Science, Ichthyology Section, 119 Foster Hall, Department of Biological Sciences, Loui- siana State University, Baton Rouge, Louisiana 70803, USA 2 University of Kentucky, Department of Biology, 200 Thomas Hunt Morgan Building, Lexington, KY 40506, USA † http://zoobank.org/0983DBAB-2F7E-477E-9138-63CED74455D3 ‡ http://zoobank.org/C71C7313-142D-4A34-AA9F-16F6757F15D1 § http://zoobank.org/8A0C3B1F-7D0A-4801-8299-D03B6C22AD34 Corresponding author: Prosanta Chakrabarty ([email protected]) Academic editor: C. Baldwin | Received 12 February 2014 | Accepted 13 May 2014 | Published 29 May 2014 http://zoobank.org/C618D622-395E-4FB7-B2DE-16C65053762F Citation: Chakrabarty P, Prejean JA, Niemiller ML (2014) The Hoosier cavefish, a new and endangered species (Amblyopsidae, Amblyopsis) from the caves of southern Indiana. ZooKeys 412: 41–57. doi: 10.3897/zookeys.412.7245 Abstract We describe a new species of amblyopsid cavefish (Percopsiformes: Amblyopsidae) in the genus Amblyopsis from subterranean habitats of southern Indiana, USA. The Hoosier Cavefish, Amblyopsis hoosieri sp. n., is distinguished from A. spelaea, its only congener, based on genetic, geographic, and morphological evi- dence. Several morphological features distinguish the new species, including a much plumper, Bibendum- like wrinkled body with rounded fins, and the absence of a premature stop codon in the gene rhodopsin. -
A SUMMARY of the LIFE HISTORY and DISTRIBUTION of the SPRING CAVEFISH, Chologaster ]Gassizi, PUTNAM, with POPULATION ESTIMATES for the SPECIES in SOUTHERN ILLINOIS
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Illinois Digital Environment for Access to Learning and Scholarship Repository A SUMMARY OF THE LIFE HISTORY AND DISTRIBUTION OF THE SPRING CAVEFISH, Chologaster ]gassizi, PUTNAM, WITH POPULATION ESTIMATES FOR THE SPECIES IN SOUTHERN ILLINOIS PHILIP W. SMITH -NORBERT M. WELCH Biological Notes No.104 Illinois Natural History Survey Urbana, Illinois • May 1978 State of Illinois Department of Registration and Education Natural History Survey Division A Summary of the life History and Distribution of the Spring Cavefish~ Chologasfer agassizi Putnam~ with Population Estimates for the Species in Southern Illinois Philip W. Smith and Norbert M. Welch The genus Chologaster, which means mutilated belly various adaptations and comparative metabolic rates of in reference to the absence of pelvic fins, was proposed all known amblyopsids. The next major contribution to by Agassiz ( 1853: 134) for a new fish found in ditches our knowledge was a series of papers by Hill, who worked and rice fields of South Carolina and described by him with the Warren County, Kentucky, population of spring as C. cornutus. Putnam (1872:30) described a second cave fish and described oxygen preferences ( 1968), food species of the genus found in a well at Lebanon, Tennes and feeding habits ( 1969a), effects of isolation upon see, naming it C. agassizi for the author of the generic meristic characters ( 1969b ), and the development of name. Forbes ( 1881:232) reported one specimen of squamation in the young ( 1971). Whittaker & Hill Chologaster from a spring in western Union County, ( 1968) described a new species of cestode parasite, nam Illinois, and noted that it differed from known specimens ing it Proteocephalus chologasteri. -
Draft Hunt Plan
Ozark Plateau National Wildlife Refuge White-tailed Deer, Eastern Gray and Fox Squirrel, and Cottontail Rabbit Hunt Plan May 2019 U.S. Fish and Wildlife Service Ozark Plateau National Wildlife Refuge 16602 County Road465 Colcord, Oklahoma 74338-2215 Submitted By: Refuge Manager ______________________________________________ ____________ Signature Date Concurrence: Refuge Supervisor ______________________________________________ ____________ Signature Date Approved: Regional Chief, National Wildlife Refuge System ______________________________________________ ____________ Signature Date i Table of Contents I. Introduction ................................................................................................................................. 1 II. Statement of Objectives ............................................................................................................. 4 III. Description of Hunting Program ............................................................................................... 4 A. Areas to be Opened to Hunting ............................................................................................. 5 B. Species to be Taken, Hunting Periods, Hunting Access ........................................................ 5 C. Hunter Permit Requirements (if applicable) ........................................................................ 12 D. Consultation and Coordination with the State/ Tribes ......................................................... 12 E. Law Enforcement ................................................................................................................ -
Biographical Memoir Carl H. Eigenmann Leonhard
NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA BIOGRAPHICAL MEMOIRS VOLUME XVIII—THIRTEENTH MEMOIR BIOGRAPHICAL MEMOIR OF CARL H. EIGENMANN 1863-1927 BY LEONHARD STEJNEGER PRESENTED TO THE ACADEMY AT THE ANNUAL MEETING, 1937 CARL H. EIGENMANN * 1863-1927 BY LEON HARD STEJNEGER Carl H. Eigenmann was born on March 9, 1863, in Flehingen, a small village near Karlsruhe, Baden, Germany, the son of Philip and Margaretha (Lieb) Eigenmann. Little is known of his ancestry, but both his physical and his mental character- istics, as we know them, proclaim him a true son of his Suabian fatherland. When fourteen years old he came to Rockport, southern Indiana, with an immigrant uncle and worked his way upward through the local school. He must have applied himself diligently to the English language and the elementary disciplines as taught in those days, for two years after his arrival in America we find him entering the University of Indiana, bent on studying law. At the time of his entrance the traditional course with Latin and Greek still dominated, but in his second year in college it was modified, allowing sophomores to choose between Latin and biology for a year's work. It is significant that the year of Eigenmann's entrance was also that of Dr. David Starr Jordan's appointment as professor of natural history. The latter had already established an enviable reputa- tion as an ichthyologist, and had brought with him from Butler University several enthusiastic students, among them Charles H. Gilbert who, although only twenty years of age, was asso- ciated with him in preparing the manuscript for the "Synopsis of North American Fishes," later published as Bulletin 19 of the United States National Museum. -
Evidence for Rapid Phenotypic and Behavioural Shifts in a Recently Established Cavefish Population
applyparastyle “fig//caption/p[1]” parastyle “FigCapt” Biological Journal of the Linnean Society, 2020, 129, 143–161. With 5 figures. Downloaded from https://academic.oup.com/biolinnean/article-abstract/129/1/143/5637080 by University of Minnesota Libraries - Twin Cities user on 13 January 2020 Evidence for rapid phenotypic and behavioural shifts in a recently established cavefish population SUZANNE E. McGAUGH1*, SAM WEAVER1, ERIN N. GILBERTSON1, BRIANNA GARRETT1, MELISSA L. RUDEEN1, STEPHANIE GRIEB1, JENNIFER ROBERTS1, ALEXANDRA DONNY1, PETER MARCHETTO2 and ANDREW G. GLUESENKAMP3 1Ecology, Evolution, and Behavior, University of Minnesota, 140 Gortner Lab, 1479 Gortner Ave, Saint Paul, MN 55108, USA 2Department of Bioproducts and Biosystems Engineering, University of Minnesota, 218 BAE, 1390 Eckles Ave., Saint Paul, MN 55108, USA 3Center for Conservation and Research, San Antonio Zoo, 3903 N St Mary’s St., San Antonio, TX 78212, USA Received 25 August 2019; revised 16 September 2019; accepted for publication 17 September 2019 Cave colonization offers a natural laboratory to study an extreme environmental shift, and diverse cave species from around the world often have converged on robust morphological, physiological and behavioural traits. The Mexican tetra (Astyanax mexicanus) has repeatedly colonized caves in the Sierra de El Abra and Sierra de Guatemala regions of north-east Mexico ~0.20–1 Mya, indicating an ability to adapt to the cave environment. The time frame for the evolution of these traits in any cave animal, however, is poorly understood. Astyanax mexicanus from the Río Grande in South Texas were brought to Central Texas beginning in the early 1900s and colonized underground environments. -
Evolution of the Nitric Oxide Synthase Family in Vertebrates and Novel
bioRxiv preprint doi: https://doi.org/10.1101/2021.06.14.448362; this version posted June 14, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 Evolution of the nitric oxide synthase family in vertebrates 2 and novel insights in gill development 3 4 Giovanni Annona1, Iori Sato2, Juan Pascual-Anaya3,†, Ingo Braasch4, Randal Voss5, 5 Jan Stundl6,7,8, Vladimir Soukup6, Shigeru Kuratani2,3, 6 John H. Postlethwait9, Salvatore D’Aniello1,* 7 8 1 Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, 80121, 9 Napoli, Italy 10 2 Laboratory for Evolutionary Morphology, RIKEN Center for Biosystems Dynamics 11 Research (BDR), Kobe, 650-0047, Japan 12 3 Evolutionary Morphology Laboratory, RIKEN Cluster for Pioneering Research (CPR), 2-2- 13 3 Minatojima-minami, Chuo-ku, Kobe, Hyogo, 650-0047, Japan 14 4 Department of Integrative Biology and Program in Ecology, Evolution & Behavior (EEB), 15 Michigan State University, East Lansing, MI 48824, USA 16 5 Department of Neuroscience, Spinal Cord and Brain Injury Research Center, and 17 Ambystoma Genetic Stock Center, University of Kentucky, Lexington, Kentucky, USA 18 6 Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech 19 Republic 20 7 Division of Biology and Biological Engineering, California Institute of Technology, 21 Pasadena, CA, USA 22 8 South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses, 23 Faculty of Fisheries and Protection of Waters, University of South Bohemia in Ceske 24 Budejovice, Vodnany, Czech Republic 25 9 Institute of Neuroscience, University of Oregon, Eugene, OR 97403, USA 26 † Present address: Department of Animal Biology, Faculty of Sciences, University of 27 Málaga; and Andalusian Centre for Nanomedicine and Biotechnology (BIONAND), 28 Málaga, Spain 29 30 * Correspondence: [email protected] 31 32 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.06.14.448362; this version posted June 14, 2021. -
Kyfishid[1].Pdf
Kentucky Fishes Kentucky Department of Fish and Wildlife Resources Kentucky Fish & Wildlife’s Mission To conserve, protect and enhance Kentucky’s fish and wildlife resources and provide outstanding opportunities for hunting, fishing, trapping, boating, shooting sports, wildlife viewing, and related activities. Federal Aid Project funded by your purchase of fishing equipment and motor boat fuels Kentucky Department of Fish & Wildlife Resources #1 Sportsman’s Lane, Frankfort, KY 40601 1-800-858-1549 • fw.ky.gov Kentucky Fish & Wildlife’s Mission Kentucky Fishes by Matthew R. Thomas Fisheries Program Coordinator 2011 (Third edition, 2021) Kentucky Department of Fish & Wildlife Resources Division of Fisheries Cover paintings by Rick Hill • Publication design by Adrienne Yancy Preface entucky is home to a total of 245 native fish species with an additional 24 that have been introduced either intentionally (i.e., for sport) or accidentally. Within Kthe United States, Kentucky’s native freshwater fish diversity is exceeded only by Alabama and Tennessee. This high diversity of native fishes corresponds to an abun- dance of water bodies and wide variety of aquatic habitats across the state – from swift upland streams to large sluggish rivers, oxbow lakes, and wetlands. Approximately 25 species are most frequently caught by anglers either for sport or food. Many of these species occur in streams and rivers statewide, while several are routinely stocked in public and private water bodies across the state, especially ponds and reservoirs. The largest proportion of Kentucky’s fish fauna (80%) includes darters, minnows, suckers, madtoms, smaller sunfishes, and other groups (e.g., lam- preys) that are rarely seen by most people. -
Making a Big Splash with Louisiana Fishes
Making a Big Splash with Louisiana Fishes Written and Designed by Prosanta Chakrabarty, Ph.D., Sophie Warny, Ph.D., and Valerie Derouen LSU Museum of Natural Science To those young people still discovering their love of nature... Note to parents, teachers, instructors, activity coordinators and to all the fishermen in us: This book is a companion piece to Making a Big Splash with Louisiana Fishes, an exhibit at Louisiana State Universi- ty’s Museum of Natural Science (MNS). Located in Foster Hall on the main campus of LSU, this exhibit created in 2012 contains many of the elements discussed in this book. The MNS exhibit hall is open weekdays, from 8 am to 4 pm, when the LSU campus is open. The MNS visits are free of charge, but call our main office at 225-578-2855 to schedule a visit if your group includes 10 or more students. Of course the book can also be enjoyed on its own and we hope that you will enjoy it on your own or with your children or students. The book and exhibit was funded by the Louisiana Board Of Regents, Traditional Enhancement Grant - Education: Mak- ing a Big Splash with Louisiana Fishes: A Three-tiered Education Program and Museum Exhibit. Funding was obtained by LSUMNS Curators’ Sophie Warny and Prosanta Chakrabarty who designed the exhibit with Southwest Museum Services who built it in 2012. The oarfish in the exhibit was created by Carolyn Thome of the Smithsonian, and images exhibited here are from Curator Chakrabarty unless noted elsewhere (see Appendix II). -
Biology of Subterranean Fishes
CHAPTER 7 Subterranean Fishes of North America: Amblyopsidae Matthew L. Niemiller1 and Thomas L. Poulson2 1Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, 37996, USA E-mail: [email protected] 2Emeritus Professor, University of Illinois-Chicago E-mail: [email protected] INTRODUCTION The Amblyopsid cavefi shes, family Amblyopsidae, have been viewed as a model system for studying the ecological and evolutionary processes of cave adaptation because the four cave-restricted species in the family represent a range of troglomorphy that refl ect variable durations of isolation in caves (Poulson 1963, Poulson and White 1969). This group has both intrigued and excited biologists since the discovery and description of Amblyopsis spelaea, the fi rst troglobitic fi sh ever described, in the early 1840s. Other than the Mexican cavefi sh (Astyanax fasciatus), cave Amblyopsids are the most comprehensively studied troglobitic fi shes (Poulson, this volume). The Amblyopsidae (Fig. 1) includes species with some unique features for all cavefi sh. Typhlichthys subterraneus is the most widely distributed of any cavefi sh species. Its distribution spans more than 5° of latitude and 1 million km2 (Proudlove 2006). Amblyopsis spelaea is the only cavefi sh known to incubate eggs in its gill chamber. In fact, this species is the only one of the approximately 1100 species in North America with this behavior. The Amblyopsidae is the most specious family of subterranean fi shes in the United States containing four of the eight species recognized. Two other © 2010 by Science Publishers 170 Biology of Subterranean Fishes Fig. 1 Members of the Amblyopsidae. The family includes (A) the surface- dwelling swampfi sh (Chologaster cornuta), (B) the troglophile spring cavefi sh (Forbesichthys agassizii), and four troglobites: (C) the southern cavefi sh (Typhlichthys subterraneus), (D) the northern cavefi sh (Amblyopsis spelaea), (E) the Ozark cavefi sh (A. -
Fish Overview
The Toledo Zoo/ThinkingWorks Teacher Overview for the Fish Lessons Ó2003 Teacher Overview: Fish Fish have many traits that are unique to this particular class of animals. Below is a list of general fish traits to help you and your students complete the ThinkingWorks menu. This lesson focuses on typical fish that most people are familiar with, not on atypical fish such as seahorses. Fish are divided into three groups or classes, each with its own set of features. These classes include the bony fish (e.g., tuna and bass), cartilaginous fish (e.g., sharks and rays) and jawless fish (e.g., lampreys). We have included a list of the different fish found at The Toledo Zoo. Most of the fish are found in the Aquarium but there are also fish in the Diversity of Life. Note that animals move constantly in and out of the Zoo so the list below may be inaccurate. Please call the Zoo for a current list of fish that are on exhibit and their locations. Typical Fish Traits Lightweight, strong scales Lateral line for detecting for protection changes in turbulence along a fish as well as changes in water pressure Gas bladder for buoyancy, stability (internal) Symmetrical tail for Most fish have a well powerful swimming developed eye for locating prey, detecting predators and finding a mate. Flexible “lips” for picking up food Gills for extracting oxygen from the water Maneuverable, paired fins for Lightweight, strong moving forward and controlling skeleton for support roll, pitch and yaw q Fish are cold-blooded, obtaining heat from the surrounding water. -
The Genome 10K Project: a Way Forward
The Genome 10K Project: A Way Forward Klaus-Peter Koepfli,1 Benedict Paten,2 the Genome 10K Community of Scientists,Ã and Stephen J. O’Brien1,3 1Theodosius Dobzhansky Center for Genome Bioinformatics, St. Petersburg State University, 199034 St. Petersburg, Russian Federation; email: [email protected] 2Department of Biomolecular Engineering, University of California, Santa Cruz, California 95064 3Oceanographic Center, Nova Southeastern University, Fort Lauderdale, Florida 33004 Annu. Rev. Anim. Biosci. 2015. 3:57–111 Keywords The Annual Review of Animal Biosciences is online mammal, amphibian, reptile, bird, fish, genome at animal.annualreviews.org This article’sdoi: Abstract 10.1146/annurev-animal-090414-014900 The Genome 10K Project was established in 2009 by a consortium of Copyright © 2015 by Annual Reviews. biologists and genome scientists determined to facilitate the sequencing All rights reserved and analysis of the complete genomes of10,000vertebratespecies.Since Access provided by Rockefeller University on 01/10/18. For personal use only. ÃContributing authors and affiliations are listed then the number of selected and initiated species has risen from ∼26 Annu. Rev. Anim. Biosci. 2015.3:57-111. Downloaded from www.annualreviews.org at the end of the article. An unabridged list of G10KCOS is available at the Genome 10K website: to 277 sequenced or ongoing with funding, an approximately tenfold http://genome10k.org. increase in five years. Here we summarize the advances and commit- ments that have occurred by mid-2014 and outline the achievements and present challenges of reaching the 10,000-species goal. We summarize the status of known vertebrate genome projects, recommend standards for pronouncing a genome as sequenced or completed, and provide our present and futurevision of the landscape of Genome 10K. -
Bennett DH and RW Mcfarlane. the Fishes of the Sava
NRC000013 ..,."'- '~_."'_~:-:\"'-'- IJ;;,~~;.·~·"" &.J. __";:' ",?\;:i\:~ ~" .• "'~- .J":. V{,W.(Z'6- '1\ SRO-NERP-12 1 Plant: I '\ , ;' '~":' ) ./ . ) J ....-----------NOTICE---------__ This report was prepared as an account of work sponsored by the United States Government. Neither the United States nor the United States Depart ment of Energy. nor any of their contractors, subcontractors, or their employ ees, makes any warranty. express or implied or assumes any legal liability or responsibility for the accuracy, completeness or usefulness of any information, apparatus, product or process disclosed, or represents that its use would not infringe privately owned rights. A PUBLICATION OF DOE'S SAVANNAH RIVER PLANT NATIONAL ENVIRONMENTAL RESEARCH PARK Copies may be obtained from Savannah River Ecology Laboratory THE FISHES OF THE SAVANNAH RIVER PLANT: NATION:AL ENVIRONMENTAL RESEARCH PARK by 1 David H. Bennett Savannah River Ecology Laboratory University of Georgia and 2 / Robert w. McFarlane Savannah River Ecology Laboratory and Savannah River Laboratory E. I. duPont de Nemours and Co. Aiken, South Carolina 29801 lAssociate Professor, Fishery Resources, College of Forestry, Wildlife and Range Sciences, University of Idaho, Moscow, Idaho 83843 2Environmental Scientist, Brown &Root, Inc., P. O. Box 3, Houston, Texas 77001 1 TABLE OF CONTENTS Subject Page Introduction 4 The Savannah River Plant 6 Groundwater and Surface Water 10 Aquatic Habitat Types 11 Historical Aspects 17 Collection of Samples 19 Measurements 20 / Species Accounts 25