Excavating Rates and Boring Pattern of Cliona
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Host Population Genetics and Biogeography Structure the Microbiome of the Sponge Cliona Delitrix
Received: 11 October 2019 | Revised: 20 December 2019 | Accepted: 23 December 2019 DOI: 10.1002/ece3.6033 ORIGINAL RESEARCH Host population genetics and biogeography structure the microbiome of the sponge Cliona delitrix Cole G. Easson1,2 | Andia Chaves-Fonnegra3 | Robert W. Thacker4 | Jose V. Lopez2 1Department of Biology, Middle Tennessee State University, Murfreesboro, TN Abstract 2Halmos College of Natural Sciences Sponges occur across diverse marine biomes and host internal microbial communities and Oceanography, Nova Southeastern that can provide critical ecological functions. While strong patterns of host specific- University, Dania Beach, FL 3Harriet L. Wilkes Honors College, Harbor ity have been observed consistently in sponge microbiomes, the precise ecological Branch Oceanographic Institute, Florida relationships between hosts and their symbiotic microbial communities remain to be Atlantic University, Fort Pierce, FL fully delineated. In the current study, we investigate the relative roles of host popu- 4Department of Ecology and Evolution, Stony Brook University, Stony Brook, NY lation genetics and biogeography in structuring the microbial communities hosted by the excavating sponge Cliona delitrix. A total of 53 samples, previously used to Correspondence Cole G. Easson, Department of Biology, demarcate the population genetic structure of C. delitrix, were selected from two lo- Middle Tennessee State University, cations in the Caribbean Sea and from eight locations across the reefs of Florida and Murfreesboro, TN 37132, USA. Email: [email protected] the Bahamas. Microbial community diversity and composition were measured using Illumina-based high-throughput sequencing of the 16S rRNA V4 region and related to Funding information Division of Ocean Sciences, Grant/ host population structure and geographic distribution. -
Patterns in Marine Community Assemblages on Continental Margins: a Faunal and Floral Synthesis from Northern Western Australian Atolls
Journal of the Royal Society of Western Australia, 94: 267–284, 2011 Patterns in marine community assemblages on continental margins: a faunal and floral synthesis from northern Western Australian atolls A Sampey 1 & J Fromont 2 1 Aquatic Zoology, Western Australian Museum, Locked Bag 49, Welshpool DC, WA 6986 [email protected] 2 Aquatic Zoology, Western Australian Museum, Locked Bag 49, Welshpool DC, WA 6986 [email protected] Manuscript received November 2010; accepted January 2011 Abstract Corals and fishes are the most visually apparent fauna on coral reefs and the most often monitored groups to detect change. In comparison, data on noncoral benthic invertebrates and marine plants is sparse. Whether patterns in diversity and distribution for other taxonomic groups align with those detected in corals and fishes is largely unknown. Four shelf-edge atolls in the Kimberley region of Western Australia were surveyed for marine plants, sponges, scleractinian corals, crustaceans, molluscs, echinoderms and fishes in 2006, with a consequent 1521 species reported. Here, we provide the first community level assessment of the biodiversity of these atolls based on these taxonomic groups. Four habitats were surveyed and each was found to have a characteristic community assemblage. Different species assemblages were found among atolls and within each habitat, particularly in the lagoon and reef flat environments. In some habitats we found the common taxa groups (fishes and corals) provide adequate information for community assemblages, but in other cases, for example in the intertidal reef flats, these commonly targeted groups are far less useful in reflecting overall community patterns. -
Satellite Monitoring of Coastal Marine Ecosystems a Case from the Dominican Republic
Satellite Monitoring of Coastal Marine Ecosystems: A Case from the Dominican Republic Item Type Report Authors Stoffle, Richard W.; Halmo, David Publisher University of Arizona Download date 04/10/2021 02:16:03 Link to Item http://hdl.handle.net/10150/272833 SATELLITE MONITORING OF COASTAL MARINE ECOSYSTEMS A CASE FROM THE DOMINICAN REPUBLIC Edited By Richard W. Stoffle David B. Halmo Submitted To CIESIN Consortium for International Earth Science Information Network Saginaw, Michigan Submitted From University of Arizona Environmental Research Institute of Michigan (ERIM) University of Michigan East Carolina University December, 1991 TABLE OF CONTENTS List of Tables vi List of Figures vii List of Viewgraphs viii Acknowledgments ix CHAPTER ONE EXECUTIVE SUMMARY 1 The Human Dimensions of Global Change 1 Global Change Research 3 Global Change Theory 4 Application of Global Change Information 4 CIESIN And Pilot Research 5 The Dominican Republic Pilot Project 5 The Site 5 The Research Team 7 Key Findings 7 CAPÍTULO UNO RESUMEN GENERAL 9 Las Dimensiones Humanas en el Cambio Global 9 La Investigación del Cambio Global 11 Teoría del Cambio Global 12 Aplicaciones de la Información del Cambio Global 13 CIESIN y la Investigación Piloto 13 El Proyecto Piloto en la República Dominicana 14 El Lugar 14 El Equipo de Investigación 15 Principales Resultados 15 CHAPTER TWO REMOTE SENSING APPLICATIONS IN THE COASTAL ZONE 17 Coastal Surveys with Remote Sensing 17 A Human Analogy 18 Remote Sensing Data 19 Aerial Photography 19 Landsat Data 20 GPS Data 22 Sonar -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
Marine Biodiversity Survey of Mermaid Reef (Rowley Shoals), Scott and Seringapatam Reef Western Australia 2006 Edited by Clay Bryce
ISBN 978-1-920843-50-2 ISSN 0313 122X Scott and Seringapatam Reef. Western Australia Marine Biodiversity Survey of Mermaid Reef (Rowley Shoals), Marine Biodiversity Survey of Mermaid Reef (Rowley Shoals), Scott and Seringapatam Reef Western Australia 2006 2006 Edited by Clay Bryce Edited by Clay Bryce Suppl. No. Records of the Western Australian Museum 77 Supplement No. 77 Records of the Western Australian Museum Supplement No. 77 Marine Biodiversity Survey of Mermaid Reef (Rowley Shoals), Scott and Seringapatam Reef Western Australia 2006 Edited by Clay Bryce Records of the Western Australian Museum The Records of the Western Australian Museum publishes the results of research into all branches of natural sciences and social and cultural history, primarily based on the collections of the Western Australian Museum and on research carried out by its staff members. Collections and research at the Western Australian Museum are centred on Earth and Planetary Sciences, Zoology, Anthropology and History. In particular the following areas are covered: systematics, ecology, biogeography and evolution of living and fossil organisms; mineralogy; meteoritics; anthropology and archaeology; history; maritime archaeology; and conservation. Western Australian Museum Perth Cultural Centre, James Street, Perth, Western Australia, 6000 Mail: Locked Bag 49, Welshpool DC, Western Australia 6986 Telephone: (08) 9212 3700 Facsimile: (08) 9212 3882 Email: [email protected] Minister for Culture and The Arts The Hon. John Day BSc, BDSc, MLA Chair of Trustees Mr Tim Ungar BEc, MAICD, FAIM Acting Executive Director Ms Diana Jones MSc, BSc, Dip.Ed Editors Dr Mark Harvey BSC, PhD Dr Paul Doughty BSc(Hons), PhD Editorial Board Dr Alex Baynes MA, PhD Dr Alex Bevan BSc(Hons), PhD Ms Ann Delroy BA(Hons), MPhil Dr Bill Humphreys BSc(Hons), PhD Dr Moya Smith BA(Hons), Dip.Ed. -
Growth Inhibition of Red Abalone (Haliotis Rufescens) Infested with an Endolithic Sponge (Cliona Sp.)
GROWTH INHIBITION OF RED ABALONE (HALIOTIS RUFESCENS) INFESTED WITH AN ENDOLITHIC SPONGE (CLIONA SP.) By Kirby Gonzalo Morejohn A Thesis Presented to The Faculty of Humboldt State University In Partial Fulfillment Of the Requirements for the Degree Master of Science In Natural Resources: Biology May, 2012 GROWTH INHIBITION OF RED ABALONE (HALIOTIS RUFESCENS) INFESTED WITH AN ENDOLITHIC SPONGE (CLIONA SP.) HUMBOLDT STATE UNIVERSITY By Kirby Gonzalo Morejohn We certify that we have read this study and that it conforms to acceptable standards of scholarly presentation and is fully acceptable, in scope and quality, as a thesis for the degree of Master of Science. ________________________________________________________________________ Dr. Sean Craig, Major Professor Date ________________________________________________________________________ Dr. Tim Mulligan, Committee Member Date ________________________________________________________________________ Dr. Frank Shaughnessy, Committee Member Date ________________________________________________________________________ Dr. Laura Rogers-Bennett, Committee Member Date ________________________________________________________________________ Dr. Michael Mesler, Graduate Coordinator Date ________________________________________________________________________ Dr. Jená Burges, Vice Provost Date ii ABSTRACT Understanding the effects of biotic and abiotic pressures on commercially important marine species is crucial to their successful management. The red abalone (Haliotis rufescensis) is a commercially -
Distribution, Growth, and Impact of the Coral-Excavating Sponge, Cliona Delitrix, on the Stony Coral Communities Offshore Southeast Florida
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 12-10-2014 Distribution, Growth, and Impact of the Coral- Excavating Sponge, Cliona delitrix, on the Stony Coral Communities Offshore Southeast Florida Ari Halperin Nova Southeastern University, [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Ari Halperin. 2014. Distribution, Growth, and Impact of the Coral-Excavating Sponge, Cliona delitrix, on the Stony Coral Communities Offshore Southeast Florida. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, Oceanographic Center. (26) https://nsuworks.nova.edu/occ_stuetd/26. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. NOVA SOUTHEASTERN UNIVERSITY OCEANOGRAPHIC CENTER DISTRIBUTION, GROWTH, AND IMPACT OF THE CORAL-EXCAVATING SPONGE, CLIONA DELITRIX, ON THE STONY CORAL COMMUNITIES OFFSHORE SOUTHEAST FLORIDA Master’s Thesis ARIEL A. HALPERIN Submitted to the Faculty of Nova Southeastern University Oceanographic Center in partial fulfillment of the requirements for the degree of Master of Science with specialties in: Marine Biology Coastal Zone Management Master of Science Thesis Marine Biology ARIEL A. HALPERIN Approved: Thesis Committee Major Professor: David S. Gilliam, Ph. D. Nova Southeastern University Committee Member: Jose V. Lopez, Ph. D. Nova Southeastern University Committee Member: Bernhard Riegl, Ph. D. Nova Southeastern University NOVA SOUTHEASTERN UNIVERSITY December 10, 2014 I. -
Coral Reef Conservation
FEB - MARCH 17 ISSUE 32 BIONEwS BIONEWS ISSUE 32 Editor’s Letter Dutch Caribbean, February - March 2017 3 The Nature Funding projects 9 Restoring Bonaire’s dry forest 11 Great news for shark and ray With ‘Nature’ funding from the Dutch Ministry researchers will be able to monitor distribution, conservation in the of Economic Affairs and support of the local assess differences in arrival and departure of the Caribbean (SPAW-STAC) governments several projects are now running whales, and analyze the whales’ songs. to maintain and sustain nature in the Dutch 13 Tiger shark crosses thirteen Caribbean. In this issue you can find an overview We also put some attention to the finding that maritime boundaries on all projects and read about ‘Restoration certain UV-filters in sun care products are an in four weeks project of Bonaire’s dry forest’ that was recently emerging risk for Caribbean coral reefs. Recently launched by Echo. This project is among researchers from Wageningen Marine Research, 15 Listening to the Caribbean’s others of great value for the protection of the under the leadership of Dr. Diana Slijkerman, have Humpback Whales endangered parrot Amazone barbadensis. been investigating the effects of sun care products with CHAMP on our reefs. Read about their project and first For the first time tiger sharks has been tagged findings on page 17. 17 UV- filters in sun care products as with a satellite transmitter in the Dutch Caribbean. an emerging risk for Caribbean This project is part of DCNA’s “Save Our Sharks” In the Netherlands, ANEMOON has for many coral reefs project funded by the Dutch National Postcode years run successful long-term projects to Lottery. -
Microbiome Structure of Ecologically Important Bioeroding Sponges (Family Clionaidae)
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.28.923250; this version posted January 29, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 1 2 Microbiome structure of ecologically important bioeroding sponges (family Clionaidae): 3 The role of host phylogeny and environmental plasticity. 4 Oriol Sacristán-Soriano1,2, †, Xavier Turon2 and Malcolm Hill1,3 5 6 7 1Department of Biology; University of Richmond; Richmond, VA 8 2Centre d’Estudis Avançats de Blanes (CEAB, CSIC), Blanes, Spain 9 3Department of Biology, Bates College, Lewiston, ME 04240 10 †Corresponding author 11 12 13 Keywords: symbiosis, bioerosion, microbiome, Symbiodinium, Cliona, Spheciospongia, 14 Cervicornia 15 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.28.923250; this version posted January 29, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. 16 Abstract 17 The potential of increased bioerosion by excavating sponges in future environmental scenarios 18 represents a potential threat to coral reef structure and function. If we are to predict changes to 19 coral reef habitats, it is important to understand the biology of these sponges. Little is known 20 about prokaryotic associations in excavating sponges despite the fact that evidence indicates they 21 contribute to the sponge growth through their heterotrophic metabolism and may even act as 22 microborers. Here, we provide the first detailed description of the microbial community of 23 multiple bioeroding sponges from the Clionaidae family (Cliona varians, C. -
Zootaxa: Cliona Minuscula, Sp. Nov. (Hadromerida : Clionaidae) And
Zootaxa 1312: 1–24 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1312 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) Cliona minuscula, sp. nov. (Hadromerida : Clionaidae) and other bioeroding sponges that only contain tylostyles CHRISTINE HANNA LYDIA SCHÖNBERG1, STEFANIE GRASS2 & ANKE TARJA HEIERMANN2 1Centre for Marine Studies, The University of Queensland, Brisbane, St. Lucia, QLD 4072, Australia; 2present address: Carl von Ossietzky Universität Oldenburg, Fakultät 5, Institut für Biologie und Umweltwissen- schaften, Abteilung Zoomorphologie und Systematik, 26111 Oldenburg, ph +49-(0)441-7983611, fax +49- (0)441-7983250. 2Carl von Ossietzky Universität Oldenburg, Fakultät 5, Institut für Biologie und Umweltwissenschaften, Abtei- lung Zoomorphologie und Systematik, 26111 Oldenburg, ph +49-(0)441-7983611, fax +49-(0)441-7983250. Abstract A new bioeroding sponge belonging to the genus Cliona is described from the Australian Great Barrier Reef, Cliona minuscula, sp. nov. As the sponge lacked microscleres, comparison with existing clionaid species was difficult. We considered 15 other species of Cliona with only tylostyles: C. alderi, C. arenosa. C. caesia nov. comb., C. californiana, C. celata, C. delitrix, C. dissimilis, C. ecaudis, C. insidiosa, C. janitrix, C. kempi, C. laticavicola, C. macgeachii, C. millepunctata and C. peponaca. Characters of all species are presented in table-form to facilitate comparison during future studies. We listed additional species of Cliona that were not directly compared to the new species, because they were either invalid, insufficiently described, or they may not be obligate bioeroders. The form and dimensions of the megascleres of C. minuscula, sp. nov. indicated that it is distinct from all considered species. -
Species Boundaries, Reproduction And
SPECIES BOUNDARIES, REPRODUCTION AND CONNECTIVITY PATTERNS FOR SYMPATRIC TETHYA SPECIES ON NEW ZEALAND TEMPERATE REEFS MEGAN RYAN SHAFFER A thesis submitted to the Victoria University of Wellington In fulfilment of the requirements for the degree of Doctor of Philosophy VICTORIA UNIVERSITY OF WELLINGTON Te Whare Wānanga o te Ūpoko o te Ika a Māui 2019 This thesis was conducted under the supervision of: Professor James J. Bell (Primary supervisor) & Professor Simon K. Davy (Co-supervisor) Victoria University of Wellington Wellington, New Zealand ABSTRACT Understanding the evolutionary forces that shape populations in the marine environment is critical for predicting population dynamics and dispersal patterns for marine organisms. For organisms with complex reproductive strategies, this remains a challenge. Sponges fulfil many functional roles and are important components of benthic environments in tropical, temperate and polar oceans. They have evolved diverse reproductive strategies, reproducing both sexually and asexually, and thus provide an opportunity to investigate complicated evolutionary questions. This PhD thesis examines sexual and asexual reproduction in two common golf-ball sponges in central New Zealand (Tethya bergquistae and T. burtoni), with particular focus on how the environment influeunces these modes of reproduction, and further, how they shape species delineations and connectivity patterns. New Zealand waters are projected to experience increases in temperature and decreases in nutrients over the next century, and therefore these species may be experience changes in basic organismal processes like reproduction due to climate change, requiring adaptation to local environments. Therefore, this work has important implications when considering how reproductive phenology, genetic diversity and population structure of marine populations may change with shifts in climate. -
Florida Keys Species List
FKNMS Species List A B C D E F G H I J K L M N O P Q R S T 1 Marine and Terrestrial Species of the Florida Keys 2 Phylum Subphylum Class Subclass Order Suborder Infraorder Superfamily Family Scientific Name Common Name Notes 3 1 Porifera (Sponges) Demospongia Dictyoceratida Spongiidae Euryspongia rosea species from G.P. Schmahl, BNP survey 4 2 Fasciospongia cerebriformis species from G.P. Schmahl, BNP survey 5 3 Hippospongia gossypina Velvet sponge 6 4 Hippospongia lachne Sheepswool sponge 7 5 Oligoceras violacea Tortugas survey, Wheaton list 8 6 Spongia barbara Yellow sponge 9 7 Spongia graminea Glove sponge 10 8 Spongia obscura Grass sponge 11 9 Spongia sterea Wire sponge 12 10 Irciniidae Ircinia campana Vase sponge 13 11 Ircinia felix Stinker sponge 14 12 Ircinia cf. Ramosa species from G.P. Schmahl, BNP survey 15 13 Ircinia strobilina Black-ball sponge 16 14 Smenospongia aurea species from G.P. Schmahl, BNP survey, Tortugas survey, Wheaton list 17 15 Thorecta horridus recorded from Keys by Wiedenmayer 18 16 Dendroceratida Dysideidae Dysidea etheria species from G.P. Schmahl, BNP survey; Tortugas survey, Wheaton list 19 17 Dysidea fragilis species from G.P. Schmahl, BNP survey; Tortugas survey, Wheaton list 20 18 Dysidea janiae species from G.P. Schmahl, BNP survey; Tortugas survey, Wheaton list 21 19 Dysidea variabilis species from G.P. Schmahl, BNP survey 22 20 Verongida Druinellidae Pseudoceratina crassa Branching tube sponge 23 21 Aplysinidae Aplysina archeri species from G.P. Schmahl, BNP survey 24 22 Aplysina cauliformis Row pore rope sponge 25 23 Aplysina fistularis Yellow tube sponge 26 24 Aplysina lacunosa 27 25 Verongula rigida Pitted sponge 28 26 Darwinellidae Aplysilla sulfurea species from G.P.