Redalyc.ORCHIDS in a CHANGING CLIMATE
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THE REPRODUCTIVE ECOLOGY OF TWO TERRESTRIAL ORCHIDS, CALADENIA RIGIDA AND CALADENIA TENTACULATA RENATE FAAST Submitted for the degree of Doctor of Philosophy School of Earth and Environmental Sciences The University of Adelaide, South Australia December, 2009 i . DEcLARATION This work contains no material which has been accepted for the award of any other degree or diploma in any university or other tertiary institution to Renate Faast and, to the best of my knowledge and belief, contains no material previously published or written by another person, except where due reference has been made in the text. I give consent to this copy of my thesis when deposited in the University Library, being made available for loan and photocopying, subject to the provisions of the Copyright Act 1968. The author acknowledges that copyright of published works contained within this thesis (as listed below) resides with the copyright holder(s) of those works. I also give permission for the digital version of my thesis to be made available on the web, via the University's digital research repository, the Library catalogue, the Australasian Digital Theses Program (ADTP) and also through web search engines. Published works contained within this thesis: Faast R, Farrington L, Facelli JM, Austin AD (2009) Bees and white spiders: unravelling the pollination' syndrome of C aladenia ri gída (Orchidaceae). Australian Joumal of Botany 57:315-325. Faast R, Facelli JM (2009) Grazrngorchids: impact of florivory on two species of Calademz (Orchidaceae). Australian Journal of Botany 57:361-372. Farrington L, Macgillivray P, Faast R, Austin AD (2009) Evaluating molecular tools for Calad,enia (Orchidaceae) species identification. -
Orchid Historical Biogeography, Diversification, Antarctica and The
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Orchid historical biogeography, ARTICLE diversification, Antarctica and the paradox of orchid dispersal Thomas J. Givnish1*, Daniel Spalink1, Mercedes Ames1, Stephanie P. Lyon1, Steven J. Hunter1, Alejandro Zuluaga1,2, Alfonso Doucette1, Giovanny Giraldo Caro1, James McDaniel1, Mark A. Clements3, Mary T. K. Arroyo4, Lorena Endara5, Ricardo Kriebel1, Norris H. Williams5 and Kenneth M. Cameron1 1Department of Botany, University of ABSTRACT Wisconsin-Madison, Madison, WI 53706, Aim Orchidaceae is the most species-rich angiosperm family and has one of USA, 2Departamento de Biologıa, the broadest distributions. Until now, the lack of a well-resolved phylogeny has Universidad del Valle, Cali, Colombia, 3Centre for Australian National Biodiversity prevented analyses of orchid historical biogeography. In this study, we use such Research, Canberra, ACT 2601, Australia, a phylogeny to estimate the geographical spread of orchids, evaluate the impor- 4Institute of Ecology and Biodiversity, tance of different regions in their diversification and assess the role of long-dis- Facultad de Ciencias, Universidad de Chile, tance dispersal (LDD) in generating orchid diversity. 5 Santiago, Chile, Department of Biology, Location Global. University of Florida, Gainesville, FL 32611, USA Methods Analyses use a phylogeny including species representing all five orchid subfamilies and almost all tribes and subtribes, calibrated against 17 angiosperm fossils. We estimated historical biogeography and assessed the -
Redalyc.ARE OUR ORCHIDS SAFE DOWN UNDER?
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica BACKHOUSE, GARY N. ARE OUR ORCHIDS SAFE DOWN UNDER? A NATIONAL ASSESSMENT OF THREATENED ORCHIDS IN AUSTRALIA Lankesteriana International Journal on Orchidology, vol. 7, núm. 1-2, marzo, 2007, pp. 28- 43 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339813005 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 7(1-2): 28-43. 2007. ARE OUR ORCHIDS SAFE DOWN UNDER? A NATIONAL ASSESSMENT OF THREATENED ORCHIDS IN AUSTRALIA GARY N. BACKHOUSE Biodiversity and Ecosystem Services Division, Department of Sustainability and Environment 8 Nicholson Street, East Melbourne, Victoria 3002 Australia [email protected] KEY WORDS:threatened orchids Australia conservation status Introduction Many orchid species are included in this list. This paper examines the listing process for threatened Australia has about 1700 species of orchids, com- orchids in Australia, compares regional and national prising about 1300 named species in about 190 gen- lists of threatened orchids, and provides recommen- era, plus at least 400 undescribed species (Jones dations for improving the process of listing regionally 2006, pers. comm.). About 1400 species (82%) are and nationally threatened orchids. geophytes, almost all deciduous, seasonal species, while 300 species (18%) are evergreen epiphytes Methods and/or lithophytes. At least 95% of this orchid flora is endemic to Australia. -
Rampant Gene Loss in the Underground Orchid Rhizanthella
CORE Metadata, citation and similar papers at core.ac.uk Provided by PubMed Central Rampant Gene Loss in the Underground Orchid Rhizanthella gardneri Highlights Evolutionary Constraints on Plastid Genomes Etienne Delannoy,*,1,2 Sota Fujii,1 Catherine Colas des Francs-Small,1 Mark Brundrett,3 and Ian Small1 1Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Perth, Australia 2Laboratoire de Biologie du De´veloppement des Plantes, Commissariat a` l’Energie Atomique, Cadarache, St. Paul Les Durances, France 3School of Plant Biology, University of Western Australia, Perth, Australia *Corresponding author: E-mail: [email protected]. Associate editor: Charles Delwiche Abstract Research article Since the endosymbiotic origin of chloroplasts from cyanobacteria 2 billion years ago, the evolution of plastids has been characterized by massive loss of genes. Most plants and algae depend on photosynthesis for energy and have retained ;110 genes in their chloroplast genome that encode components of the gene expression machinery and subunits of the photosystems. However, nonphotosynthetic parasitic plants have retained a reduced plastid genome, showing that plastids have other essential functions besides photosynthesis. We sequenced the complete plastid genome of the underground orchid, Rhizanthella gardneri. This remarkable parasitic subterranean orchid possesses the smallest organelle genome yet described in land plants. With only 20 proteins, 4 rRNAs, and 9 tRNAs encoded in 59,190 bp, it is the least gene-rich plastid genome known to date apart from the fragmented plastid genome of some dinoflagellates. Despite numerous differences, striking similarities with plastid genomes from unrelated parasitic plants identify a minimal set of protein-encoding and tRNA genes required to reside in plant plastids. -
The Orchid Flora of the Colombian Department of Valle Del Cauca Revista Mexicana De Biodiversidad, Vol
Revista Mexicana de Biodiversidad ISSN: 1870-3453 [email protected] Universidad Nacional Autónoma de México México Kolanowska, Marta The orchid flora of the Colombian Department of Valle del Cauca Revista Mexicana de Biodiversidad, vol. 85, núm. 2, 2014, pp. 445-462 Universidad Nacional Autónoma de México Distrito Federal, México Available in: http://www.redalyc.org/articulo.oa?id=42531364003 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Revista Mexicana de Biodiversidad 85: 445-462, 2014 Revista Mexicana de Biodiversidad 85: 445-462, 2014 DOI: 10.7550/rmb.32511 DOI: 10.7550/rmb.32511445 The orchid flora of the Colombian Department of Valle del Cauca La orquideoflora del departamento colombiano de Valle del Cauca Marta Kolanowska Department of Plant Taxonomy and Nature Conservation, University of Gdańsk. Wita Stwosza 59, 80-308 Gdańsk, Poland. [email protected] Abstract. The floristic, geographical and ecological analysis of the orchid flora of the department of Valle del Cauca are presented. The study area is located in the southwestern Colombia and it covers about 22 140 km2 of land across 4 physiographic units. All analysis are based on the fieldwork and on the revision of the herbarium material. A list of 572 orchid species occurring in the department of Valle del Cauca is presented. Two species, Arundina graminifolia and Vanilla planifolia, are non-native elements of the studied orchid flora. The greatest species diversity is observed in the montane regions of the study area, especially in wet montane forest. -
Rhizanthella Johnstonii (South Coast Underground Orchid)
Threatened species nomination form (Version 2018) Threatened species nomination For nominations to the WA Threatened Species Scientific Committee (and the Minister for Environment) to amend threatened species listings under the WA Wildlife Conservation Act 1950 or their assigned IUCN Red List threat status ranking. Cover Page (Office use only) Species name (scientific and common name): Rhizanthella johnstonii (South Coast Underground Orchid) Nomination for (addition, deletion, change): Addition Nominated conservation category and criteria: Critically Endangered B1ab(iii)+B2ab(iii); D Scientific committee assessment of eligibility against the criteria: A. Population size reduction B. Geographic range C. Small population size and decline D. Very small or restricted population E. Quantitative analysis Outcome: Scientific committee meeting date: Scientific committee comments: Recommendation: Ministerial approval: Government Gazettal/ Legislative effect: Page 1 of 27 Threatened species nomination form Nomination summary (to be completed by nominator) Current conservation status Scientific name: Rhizanthella johnstonii Common name: South Coast Underground Orchid Family name: Orchidaceae Fauna Flora Nomination for: Listing Change of status Delisting 1. Is the species currently on any conservation list, either in a *Currently listed as CR under Rhizanthella State or Territory, Australia or Internationally? gardneri, once Rhizanthella johnstonii is added to the WA Plant census it will be listed as 2. Is it present in an Australian jurisdiction, -
E29695d2fc942b3642b5dc68ca
ISSN 1409-3871 VOL. 9, No. 1—2 AUGUST 2009 Orchids and orchidology in Central America: 500 years of history CARLOS OSSENBACH INTERNATIONAL JOURNAL ON ORCHIDOLOGY LANKESTERIANA INTERNATIONAL JOURNAL ON ORCHIDOLOGY Copyright © 2009 Lankester Botanical Garden, University of Costa Rica Effective publication date: August 30, 2009 Layout: Jardín Botánico Lankester. Cover: Chichiltic tepetlauxochitl (Laelia speciosa), from Francisco Hernández, Rerum Medicarum Novae Hispaniae Thesaurus, Rome, Jacobus Mascardus, 1628. Printer: Litografía Ediciones Sanabria S.A. Printed copies: 500 Printed in Costa Rica / Impreso en Costa Rica R Lankesteriana / International Journal on Orchidology No. 1 (2001)-- . -- San José, Costa Rica: Editorial Universidad de Costa Rica, 2001-- v. ISSN-1409-3871 1. Botánica - Publicaciones periódicas, 2. Publicaciones periódicas costarricenses LANKESTERIANA i TABLE OF CONTENTS Introduction 1 Geographical and historical scope of this study 1 Political history of Central America 3 Central America: biodiversity and phytogeography 7 Orchids in the prehispanic period 10 The area of influence of the Chibcha culture 10 The northern region of Central America before the Spanish conquest 11 Orchids in the cultures of Mayas and Aztecs 15 The history of Vanilla 16 From the Codex Badianus to Carl von Linné 26 The Codex Badianus 26 The expedition of Francisco Hernández to New Spain (1570-1577) 26 A new dark age 28 The “English American” — the journey through Mexico and Central America of Thomas Gage (1625-1637) 31 The renaissance of science -
The Complete Plastid Genome Sequence of Iris Gatesii (Section Oncocyclus), a Bearded Species from Southeastern Turkey
Aliso: A Journal of Systematic and Evolutionary Botany Volume 32 | Issue 1 Article 3 2014 The ompletC e Plastid Genome Sequence of Iris gatesii (Section Oncocyclus), a Bearded Species from Southeastern Turkey Carol A. Wilson Rancho Santa Ana Botanic Garden, Claremont, California Follow this and additional works at: http://scholarship.claremont.edu/aliso Part of the Botany Commons, Ecology and Evolutionary Biology Commons, and the Genomics Commons Recommended Citation Wilson, Carol A. (2014) "The ompC lete Plastid Genome Sequence of Iris gatesii (Section Oncocyclus), a Bearded Species from Southeastern Turkey," Aliso: A Journal of Systematic and Evolutionary Botany: Vol. 32: Iss. 1, Article 3. Available at: http://scholarship.claremont.edu/aliso/vol32/iss1/3 Aliso, 32(1), pp. 47–54 ISSN 0065-6275 (print), 2327-2929 (online) THE COMPLETE PLASTID GENOME SEQUENCE OF IRIS GATESII (SECTION ONCOCYCLUS), A BEARDED SPECIES FROM SOUTHEASTERN TURKEY CAROL A. WILSON Rancho Santa Ana Botanic Garden and Claremont Graduate University, 1500 North College Avenue, Claremont, California 91711 ([email protected]) ABSTRACT Iris gatesii is a rare bearded species in subgenus Iris section Oncocyclus that occurs in steppe communities of southeastern Turkey. This species is not commonly cultivated, but related species in section Iris are economically important horticultural plants. The complete plastid genome is reported for I. gatesii based on data generated using the Illumina HiSeq platform and is compared to genomes of 16 species selected from across the monocotyledons. This Iris genome is the only known plastid genome available for order Asparagales that is not from Orchidaceae. The I. gatesii plastid genome, unlike orchid genomes, has little gene loss and rearrangement and is likely to be similar to other genomes from Asparagales. -
Redalyc.AN UPDATED CHECKLIST of the ORCHIDACEAE OF
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica Bogarín, Diego; Serracín, Zuleika; Samudio, Zabdy; Rincón, Rafael; Pupulin, Franco AN UPDATED CHECKLIST OF THE ORCHIDACEAE OF PANAMA Lankesteriana International Journal on Orchidology, vol. 14, núm. 3, diciembre, 2014, pp. 135-364 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339829001 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 14(1): 135—364. 2014. AN UPDATED CHECKLIST OF THE ORCHIDACEAE OF PANAMA DIEGO BOGARÍN1,2,4, ZULEIKA SERRACÍN2, ZABDY SAMUDIO2, RAFAEL RINCÓN2 & FRANCO PUPULIN1,3 1 Jardín Botánico Lankester, Universidad de Costa Rica. P.O. Box 302-7050 Cartago, Costa Rica, A.C. 2 Herbario UCH, Universidad Autónoma de Chiriquí, 0427, David, Chiriquí, Panama 3 Harvard University Herbaria, 22 Divinity Avenue, Cambridge, Massachusetts, U.S.A.; Marie Selby Botanical Gardens, Sarasota, FL, U.S.A. 4 Author for correspondence: [email protected] AbstRACT. The Orchidaceae is one of the most diverse vascular plant families in the Neotropics and the most diverse in Panama. The number of species is triple that of other well-represented families of angiosperms such as Rubiaceae, Fabaceae and Poaceae. Despite its importance in terms of diversity, the latest checklist was published ten years ago and the latest in-depth taxonomic treatments were published in 1949 and 1993. -
Dating the Origin of the Orchidaceae from a Fossil Orchid with Its Pollinator
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/6111228 Dating the origin of the Orchidaceae from a fossil orchid with its pollinator Article in Nature · September 2007 DOI: 10.1038/nature06039 · Source: PubMed CITATIONS READS 211 770 5 authors, including: Santiago R Ramírez Barbara Gravendeel University of California, Davis Leiden University, Naturalis Biodiversity Center & University of Applied Sciences L… 50 PUBLICATIONS 999 CITATIONS 208 PUBLICATIONS 2,081 CITATIONS SEE PROFILE SEE PROFILE Rodrigo B. Singer Naomi E Pierce Universidade Federal do Rio Grande do Sul Harvard University 109 PUBLICATIONS 1,381 CITATIONS 555 PUBLICATIONS 6,496 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Insect endosymbiont diversity View project Support threatened research Institutions from Southern Brazil (Rio Grande do Sul) View project All content following this page was uploaded by Barbara Gravendeel on 31 May 2014. The user has requested enhancement of the downloaded file. Vol 448 | 30 August 2007 | doi:10.1038/nature06039 LETTERS Dating the origin of the Orchidaceae from a fossil orchid with its pollinator Santiago R. Ramı´rez1, Barbara Gravendeel2, Rodrigo B. Singer3, Charles R. Marshall1,4 & Naomi E. Pierce1 Since the time of Darwin1, evolutionary biologists have been fas- subfamily showed that the size, shape and ornamentation of the cinated by the spectacular adaptations to insect pollination exhib- fossil closely resemble those of modern members of the subtribe ited by orchids. However, despite being the most diverse plant Goodyerinae, particularly the genera Kreodanthus and Microchilus family on Earth2, the Orchidaceae lack a definitive fossil record (Supplementary Table 1). -
Rhizanthella Gardneri (Western Underground Orchid)
Short form Threatened species nomination form (Version Mar 2016) Abridged Threatened Species Nomination Form For nominations/assessments under the Common Assessment Method (CAM) where supporting information is available, but not in a format suitable for demonstrating compliance with the CAM, and assessment against the IUCN Red List threat status. Cover Page (Office use only for Assessment) Species name(scientific and common name): Rhizanthella gardneri (Western Underground Orchid) Nomination for (addition, deletion, change): Change of criteria Nominated conservation category and criteria: CR C1+2a(i); D Scientific committee assessment of eligibility against the criteria: This assessment is consistent with the standards set out in Schedule 1, item 2.7 (h) and Yes No 2.8 of the Common Assessment Method Memorandum of Understanding. A. Population size reduction B. Geographic range C. Small population size and decline D. Very small or restricted population E. Quantitative analysis Outcome: Scientific committee Meeting date: Scientific committee comments: Recommendation: Page 1 of 13 Ministerial approval: Date of Gazettal/ Legislative effect: Page 2 of 13 Nomination/Proposal summary (to be completed by nominator) Current conservation status Scientific name: Rhizanthella gardneri Common name: Underground orchid Family name: Orchidaceae Fauna Flora Nomination for: Listing Change of status/criteria Delisting 1. Is the species currently on any conservation list, either in a State or Territory, Australia or Internationally? Provide details of the occurrence and listing status for each jurisdiction in the following table 2. Is it present in an Australian jurisdiction, but not listed? Listing category i.e. State / Territory in Date listed or critically Listing criteria i.e. Jurisdiction which the species assessed (or endangered or B1ab(iii)+2ab(iii) occurs N/A) ‘none’ International(IUCN Red List) National (EPBC Act) Endangered (as previously circumscribed as R. -
Table S1 PF00931 Species Abbreviated Species
Table S1 PF00931 Species_abbreviated Species Taxon Database 223 Acoerulea Aquilegia coerulea dicot phytozome12.1.6 152 Acomosus Ananas comosus monocot phytozome12.1.6 124 Ahalleri Arabidopsis halleri dicot phytozome12.1.6 119 Ahypochondriacus Amaranthus hypochondriacus dicot phytozome12.1.6 105 Ahypochondriacus_v2.1 Amaranthus hypochondriacus dicot phytozome12.1.6 177 Alyrata Arabidopsis lyrata dicot phytozome12.1.6 376 Aoccidentale_v0.9 Anacardium occidentale dicot phytozome12.1.6 35 Aofficinalis_V1.1 Asparagus officinalis monocot phytozome12.1.6 160 Athaliana Arabidopsis thaliana columbia dicot phytozome12.1.6 160 Athaliana_Araport11 Arabidopsis thaliana columbia dicot phytozome12.1.6 99 Atrichopoda Amborella trichopoda Amborellales phytozome12.1.6 16 Bbraunii_v2.1 Botryococcus braunii Chlorophyta phytozome12.1.6 308 Bdistachyon Brachypodium distachyon monocot phytozome12.1.6 331 BdistachyonBD21-3_v1.1 Brachypodium distachyon Bd21-3 monocot phytozome12.1.6 535 Bhybridum_v1.1 Brachypodium hybridum monocot phytozome12.1.6 114 Boleraceacapitata Brassica oleracea capitata dicot phytozome12.1.6 187 BrapaFPsc Brassica rapa FPsc dicot phytozome12.1.6 235 Bstacei Brachypodium stacei monocot phytozome12.1.6 297 Bstricta Boechera stricta dicot phytozome12.1.6 414 Bsylvaticum_v1.1 Brachypodium sylvaticum monocot phytozome12.1.6 766 Carabica_v0.5 Coffea arabica dicot phytozome12.1.6 99 Carietinum_v1.0 Cicer arietinum dicot phytozome12.1.6 342 Cclementina Citrus clementina dicot phytozome12.1.6 96 Cgrandiflora Capsella grandiflora dicot phytozome12.1.6