Subfam. ORCHIDOIDEAE 兰亚科 Lan Ya Ke Chen Xinqi (陈心启 Chen Sing-Chi), Lang Kaiyong (郎楷永 Lang Kai-Yung); Stephan W
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Breeding Ecology of Kittlitz's Murrelet at Agattu Island, Alaska, in 2010
AMNWR 2011/01 BREEDING ECOLOGY OF KITTLITZ’S MURRELET AT AGATTU ISLAND, ALASKA, IN 2010: PROGRESS REPORT Photo: R. Kaler/USFWS 1 2 1 1 3 Robb S. A. Kaler , Leah A. Kenney , Jeffrey C. Williams , G. Vernon Byrd , and John F. Piatt Key Words: Alaska, Aleutian Islands, Brachyramphus brevirostris, breeding ecology, growth rates, Kittlitz’s murrelet, Near Islands, nest site selection, parental provisioning, reproductive success. 1Alaska Maritime National Wildlife Refuge 95 Sterling Highway, Suite 1 Homer, Alaska 99603 2Department of Biological Sciences University of Alaska Anchorage Anchorage, Alaska 99501 3Alaska Science Center, US Geological Survey 4210 University Drive Anchorage, Alaska 99508 Cite as: Kaler, R.S.A., L.A. Kenney, J.C. Williams, G.V. Byrd, and J.F. Piatt. 2011. Breeding biology of Kittlitz’s murrelet at Agattu Island, Alaska, in 2010: progress report. U.S. Fish and Wildl. Serv. Rep. AMNWR 2011/01. 2 TABLE OF CONTENTS INTRODUCTION ......................................................................................................................... 3 STUDY AREA .............................................................................................................................. 4 METHODS .................................................................................................................................... 4 RESULTS ...................................................................................................................................... 8 2010 SUMMARY AND RECOMMENDATIONS ................................................................... -
Dactylorhiza Nevski, the Correct Generic Name of the Dactylorchids
DACTYLORHIZA NEVSKI, THE CORRECT GENERIC NAME OF THE DACTYLORCHIDS By P. F. HUNT and V. S. SUMMERHAYES Royal Botanic Gardens, Kew ABSTRACT The correct generic name for the dactylorchids (marsh and spotted orchids) is shown to be Dactylorhiza Nevski. A list of species of Dactylorhiza is given and the subspecies occurring in the British Isles are indicated. Several new combinations at specific and subspecific rank and five new bigeneric hybrid formulae are published for the first time. In his Species Plantarum (939-944, 1753) Linnaeus divided the genus Orchis into three parts based on the morphology of the roots, namely: Bulbis indivisis, Bulbis palmatis and Bulbis fasciculatis. Some time later, Necker, in his Elementa Botanica (3, 129, 1790), raised these groups to generic level although he actually used the category name 'species naturalis' for them. Orchis L. was retained for Bulbis indivisis whilst Bulbis palmatis and Bulbis fasciculatis became Dactylorhiza Necker. The next important treatment of the genus was by Klinge, in 1898 (Acta Hort. Petrop. 17,148). He recognized two subgenera, namely Eu-orchis, into which he placed the Linnaean Bulbis indivisis, and Dactylorchis which included Bulbis palmatis. This classification was adopted by many later workers, but in 1935, Nevski, in his account of the Orchidaceae for the Flora URSS, substituted Necker's name Dactylorhiza for the second of Klinge's sub genera on the ground that it was earlier than Dactylorchis Klinge. Nevski also seems to have excluded Linnaeus's Bulbis fasciculatis, at least by implication. Two years later, however, Nevski evidently decided that the two subgenera were better treated as distinct genera and adopted the generic name Dactylorhiza, making a new combination, D. -
Guide to the Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- LILIACEAE
Guide to the Flora of the Carolinas, Virginia, and Georgia, Working Draft of 17 March 2004 -- LILIACEAE LILIACEAE de Jussieu 1789 (Lily Family) (also see AGAVACEAE, ALLIACEAE, ALSTROEMERIACEAE, AMARYLLIDACEAE, ASPARAGACEAE, COLCHICACEAE, HEMEROCALLIDACEAE, HOSTACEAE, HYACINTHACEAE, HYPOXIDACEAE, MELANTHIACEAE, NARTHECIACEAE, RUSCACEAE, SMILACACEAE, THEMIDACEAE, TOFIELDIACEAE) As here interpreted narrowly, the Liliaceae constitutes about 11 genera and 550 species, of the Northern Hemisphere. There has been much recent investigation and re-interpretation of evidence regarding the upper-level taxonomy of the Liliales, with strong suggestions that the broad Liliaceae recognized by Cronquist (1981) is artificial and polyphyletic. Cronquist (1993) himself concurs, at least to a degree: "we still await a comprehensive reorganization of the lilies into several families more comparable to other recognized families of angiosperms." Dahlgren & Clifford (1982) and Dahlgren, Clifford, & Yeo (1985) synthesized an early phase in the modern revolution of monocot taxonomy. Since then, additional research, especially molecular (Duvall et al. 1993, Chase et al. 1993, Bogler & Simpson 1995, and many others), has strongly validated the general lines (and many details) of Dahlgren's arrangement. The most recent synthesis (Kubitzki 1998a) is followed as the basis for familial and generic taxonomy of the lilies and their relatives (see summary below). References: Angiosperm Phylogeny Group (1998, 2003); Tamura in Kubitzki (1998a). Our “liliaceous” genera (members of orders placed in the Lilianae) are therefore divided as shown below, largely following Kubitzki (1998a) and some more recent molecular analyses. ALISMATALES TOFIELDIACEAE: Pleea, Tofieldia. LILIALES ALSTROEMERIACEAE: Alstroemeria COLCHICACEAE: Colchicum, Uvularia. LILIACEAE: Clintonia, Erythronium, Lilium, Medeola, Prosartes, Streptopus, Tricyrtis, Tulipa. MELANTHIACEAE: Amianthium, Anticlea, Chamaelirium, Helonias, Melanthium, Schoenocaulon, Stenanthium, Veratrum, Toxicoscordion, Trillium, Xerophyllum, Zigadenus. -
Hemipiliopsis, a New Genus of Orchidaceae
Hemipiliopsis, a New Genus of Orchidaceae Yibo Luo and Singchi Chen (Xinqi Chen) Laboratory of Systematic & Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Nanxincun 20, Xiangshan, Beijing, 100093, People's Republic of China. [email protected] ABSTRACT. Hemipiliopsis, a monotypic new genus Hoc genus novum Hemipiliae et Habenariae simile, sed of Orchidaceae, is described based on H. purpureo- ab ambobus forma calcaris, a priore viscidiis plus minusve expositis, stigmatis lobulis duobus elongato-pulvinatis, a punctata (K. Y. Lang) Y. B. Luo & S. C. Chen (Ha- posteriore planta (cum caule, folio, pedunculis, rachidi, benaria purpureopunctata K. Y. Lang) from south- bracteis, pedicellis, ovariis, sepalis et petalis) purpureo- eastern Xizang (Tibet). Its possible relationships to punctata, stigmatis lobulis parieti postico cavitatis af®xis, Brachycorythis, Hemipilia, and Habenaria are dis- atque rostello magno differt. cussed. Terrestrial herb; tubers ellipsoid or subellipsoid, Key words: China, Hemipiliopsis, Orchidaceae. ¯eshy. Stem erect, usually with one leaf near the base. Leaf elliptic to ovate-oblong, acuminate or While the senior author worked on the genus acute, amplexicaul at base. In¯orescence loosely Hemipilia Lindley, he felt it dif®cult to treat a spe- several- to many-¯owered, spotted with purple on cies that is very similar in habit to Hemipilia but rachis and peduncle; bracts ovate-lanceolate, with was described by Lang (Lang & Tsi, 1978) as Ha- evident purple spots dorsally; pedicel and ovary benaria purpureopunctata K. Y. Lang. Moreover, with purple spots. Flowers spotted with purple ex- Lang mentioned that this generic placement was cept the lip; dorsal sepal erect, oblong, concave, based on the presence of a small rostellum, naked forming a hood together with petals; lateral sepals viscidia, and two protruding clavate stigmas (Lang obliquely ovate-elliptic, usually 6 re¯exed; petals & Tsi, 1978). -
Phylogenetic Relationships of Discyphus Scopulariae
Phytotaxa 173 (2): 127–139 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2014 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.173.2.3 Phylogenetic relationships of Discyphus scopulariae (Orchidaceae, Cranichideae) inferred from plastid and nuclear DNA sequences: evidence supporting recognition of a new subtribe, Discyphinae GERARDO A. SALAZAR1, CÁSSIO VAN DEN BERG2 & ALEX POPOVKIN3 1Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Apartado Postal 70-367, 04510 México, Distrito Federal, México; E-mail: [email protected] 2Universidade Estadual de Feira de Santana, Departamento de Ciências Biológicas, Av. Transnordestina s.n., 44036-900, Feira de Santana, Bahia, Brazil 3Fazenda Rio do Negro, Entre Rios, Bahia, Brazil Abstract The monospecific genus Discyphus, previously considered a member of Spiranthinae (Orchidoideae: Cranichideae), displays both vegetative and floral morphological peculiarities that are out of place in that subtribe. These include a single, sessile, cordate leaf that clasps the base of the inflorescence and lies flat on the substrate, petals that are long-decurrent on the column, labellum margins free from sides of the column and a column provided with two separate, cup-shaped stigmatic areas. Because of its morphological uniqueness, the phylogenetic relationships of Discyphus have been considered obscure. In this study, we analyse nucleotide sequences of plastid and nuclear DNA under maximum parsimony -
Phylogenetic Relationships of Rhizoctonia Fungi Within the Cantharellales
fungal biology 120 (2016) 603e619 journal homepage: www.elsevier.com/locate/funbio Phylogenetic relationships of Rhizoctonia fungi within the Cantharellales Dolores GONZALEZa,*, Marianela RODRIGUEZ-CARRESb, Teun BOEKHOUTc, Joost STALPERSc, Eiko E. KURAMAEd, Andreia K. NAKATANIe, Rytas VILGALYSf, Marc A. CUBETAb aInstituto de Ecologıa, A.C., Red de Biodiversidad y Sistematica, Carretera Antigua a Coatepec No. 351, El Haya, 91070 Xalapa, Veracruz, Mexico bDepartment of Plant Pathology, North Carolina State University, Center for Integrated Fungal Research, Campus Box 7251, Raleigh, NC 27695, USA cCBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands dDepartment of Microbial Ecology, Netherlands Institute of Ecology (NIOO/KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands eUNESP, Faculdade de Ci^encias Agronomicas,^ CP 237, 18603-970 Botucatu, SP, Brazil fDepartment of Biology, Duke University, Durham, NC 27708, USA article info abstract Article history: Phylogenetic relationships of Rhizoctonia fungi within the order Cantharellales were studied Received 2 January 2015 using sequence data from portions of the ribosomal DNA cluster regions ITS-LSU, rpb2, tef1, Received in revised form and atp6 for 50 taxa, and public sequence data from the rpb2 locus for 165 taxa. Data sets 1 January 2016 were analysed individually and combined using Maximum Parsimony, Maximum Likeli- Accepted 19 January 2016 hood, and Bayesian Phylogenetic Inference methods. All analyses supported the mono- Available online 29 January 2016 phyly of the family Ceratobasidiaceae, which comprises the genera Ceratobasidium and Corresponding Editor: Thanatephorus. Multi-locus analysis revealed 10 well-supported monophyletic groups that Joseph W. Spatafora were consistent with previous separation into anastomosis groups based on hyphal fusion criteria. -
Phylogenetics of Tribe Orchideae (Orchidaceae: Orchidoideae)
Annals of Botany 110: 71–90, 2012 doi:10.1093/aob/mcs083, available online at www.aob.oxfordjournals.org Phylogenetics of tribe Orchideae (Orchidaceae: Orchidoideae) based on combined DNA matrices: inferences regarding timing of diversification and evolution of pollination syndromes Luis A. Inda1,*, Manuel Pimentel2 and Mark W. Chase3 1Escuela Polite´cnica Superior de Huesca, Universidad de Zaragoza, carretera de Cuarte sn. 22071 Huesca, Spain, 2Facultade de Ciencias, Universidade da Corun˜a, Campus da Zapateira sn. 15071 A Corun˜a, Spain and 3Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK * For correspondence. E-mail [email protected] Received: 3 November 2011 Returned for revision: 9 December 2011 Accepted: 1 March 2012 Published electronically: 25 April 2012 † Background and aims Tribe Orchideae (Orchidaceae: Orchidoideae) comprises around 62 mostly terrestrial genera, which are well represented in the Northern Temperate Zone and less frequently in tropical areas of both the Old and New Worlds. Phylogenetic relationships within this tribe have been studied previously using only nuclear ribosomal DNA (nuclear ribosomal internal transcribed spacer, nrITS). However, different parts of the phylogenetic tree in these analyses were weakly supported, and integrating information from different plant genomes is clearly necessary in orchids, where reticulate evolution events are putatively common. The aims of this study were to: (1) obtain a well-supported and dated phylogenetic hypothesis for tribe Orchideae, (ii) assess appropriateness of recent nomenclatural changes in this tribe in the last decade, (3) detect possible examples of reticulate evolution and (4) analyse in a temporal context evolutionary trends for subtribe Orchidinae with special emphasis on pollination systems. -
Identification of Anoectochilus Based on Rdna ITS Sequences Alignment and SELDI-TOF-MS Chuan Gao1, 3, Fusheng Zhang1, Jun Zhang4, Shunxing Guo1 , Hongbo Shao2,5
Int. J. Biol. Sci. 2009, 5 727 International Journal of Biological Sciences 2009; 5(7):727-735 © Ivyspring International Publisher. All rights reserved Research Paper Identification of Anoectochilus based on rDNA ITS sequences alignment and SELDI-TOF-MS Chuan Gao1, 3, Fusheng Zhang1, Jun Zhang4, Shunxing Guo1 , Hongbo Shao2,5 1. Institute of Medicinal Plant Development, Beijing Union Medical College/Chinese Academy of Medicinal Sciences, Beijing 100193, China; 2. Institute of Soil and Water Conservation, Chinese Academy of Sciences and Ministry of Water Resources, Yangling 712100, China; 3. Institute of Beijing Pharmacochemistry, Beijing 102205, China; 4. Central Laboratory of 306 Hospital of PLA, Beijing 100083, China; 5. Yantai Institute of Costal Zone Research, Chinese Academy of Sciences (CAS), Yantai 264003, China. Corresponding authors: [email protected] (Guo SX); [email protected] (Shao HB). Posting address: Dr. Professor Shao Hongbo, Yantai Institute of Costal Zone Research, Chinese Academy of Sciences (CAS), Yantai 264003, China. Received: 2009.08.28; Accepted: 2009.11.26; Published: 2009.12.02 Abstract The internal transcribed spacer (ITS) sequences alignment and proteomic difference of Anoectochilus interspecies have been studied by means of ITS molecular identification and surface enhanced laser desorption ionization time of flight mass spectrography. Results showed that variety certification on Anoectochilus by ITS sequences can not determine spe- cies, and there is proteomic difference among Anoectochilus interspecies. Moreover, pro- teomic finger printings of five Anoectochilus species have been established for identifying spe- cies, and genetic relationships of five species within Anoectochilus have been deduced ac- cording to proteomic differences among five species. Key words: Anoectochilus, ITS, proteomic finger printing, SELDI sterile condition. -
Trade in Zambian Edible Orchids—DNA Barcoding Reveals the Use of Unexpected Orchid Taxa for Chikanda
G C A T T A C G G C A T genes Article Trade in Zambian Edible Orchids—DNA Barcoding Reveals the Use of Unexpected Orchid Taxa for Chikanda Sarina Veldman 1,* , Seol-Jong Kim 1 , Tinde R. van Andel 2 , Maria Bello Font 3, Ruth E. Bone 4, Benny Bytebier 5 , David Chuba 6, Barbara Gravendeel 2,7,8 , Florent Martos 5,9 , Geophat Mpatwa 10, Grace Ngugi 5,11, Royd Vinya 10, Nicholas Wightman 12, Kazutoma Yokoya 4 and Hugo J. de Boer 1,2 1 Department of Organismal Biology, Systematic Biology, Uppsala University, Norbyvägen 18D, 75236 Uppsala, Sweden; [email protected] (S.-J.K.); [email protected] (H.J.d.B.) 2 Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands; [email protected] (T.R.v.A.); [email protected] (B.G.) 3 Natural History Museum, University of Oslo, Postboks 1172, Blindern, 0318 Oslo, Norway; [email protected] 4 Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK; [email protected] (R.E.B.); [email protected] (K.Y.) 5 Bews Herbarium, School of Life Sciences, University of KwaZulu-Natal, Pr. Bag X01, Scottsville 3209, South Africa; [email protected] (B.B.); fl[email protected] (F.M.); [email protected] (G.N.) 6 Department of Biological Sciences, University of Zambia, Box 32379 Lusaka, Zambia; [email protected] 7 Institute of Biology Leiden, Leiden University, P.O. Box 9505, 2300 RA Leiden, The Netherlands 8 University of Applied Sciences Leiden, Zernikedreef 11, 2333 CK Leiden, The Netherlands 9 Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d’histoire naturelle, CNRS, Sorbonne Université, EPHE, CP50, 45 rue Buffon 75005 Paris, France 10 School of Natural Resources, The Copperbelt University, PO Box 21692 Kitwe, Zambia; [email protected] (G.M.); [email protected] (R.V.) 11 East African Herbarium, National Museums of Kenya, P.O. -
May 2014. Orchid Specialist Group Newsletter
ORCHID CONSERVATION NEWS The Newsletter of the Orchid Specialist Group of the IUCN Species Survival Commission Issue 1 May 2014 The Value of Long Term Studies Editorial Endangered Hawaiian endemic, Peristylus holochila, initiates anthesis in vitro and ex vitro Long term agricultural field experiments at Lawrence W. Zettler Rothamstead, England, are notable because when they Shanna E. David began in 1843, the founders could not possibly have predicted what might be discovered over the following Orchid Recovery Program, Department of Biology 160 years. The conservation value of long term studies Illinois College, 1101 West College Avenue of orchids was discussed in 1990 by the late Carl Olof Jacksonville, IL 62650 USA Tamm, Uppsala, Sweden, when he presented his observations of individual plant behaviour at the ([email protected]) International Orchid Symposium. His conclusion after some 40 years of observation was simple: long term Only three orchid species are native to the Hawaiian observations are essential to conservation and that archipelago: Anoectochilus sandvicensis (Hawaiian individual plant tracking of selected orchid taxa was Jeweled Orchid, ke kino o kanaloa), Liparis hawaiensis recommended. (Hawaii Widelip Orchid, awapuhiakanaloa) and Peristylus (Platanthera) holochila (Hawaiian Bog Two papers have recently been published that Orchid, puahala a kane). Of these three, by far the rarest demonstrate the conservation potential of decades-long is P. holochila (Fig. 1) consisting of 33 known plants studies. Joyce and Allan Reddoch summarized what scattered amongst three islands as of 2011 (Kauai, has been learned from some four decades of monitoring Maui, Molokai). 22 species in Gatineau Park, QC, Canada (Reddoch & Reddoch, 2014). -
Fungal Diversity Driven by Bark Features Affects Phorophyte
www.nature.com/scientificreports OPEN Fungal diversity driven by bark features afects phorophyte preference in epiphytic orchids from southern China Lorenzo Pecoraro1*, Hanne N. Rasmussen2, Sofa I. F. Gomes3, Xiao Wang1, Vincent S. F. T. Merckx3, Lei Cai4 & Finn N. Rasmussen5 Epiphytic orchids exhibit varying degrees of phorophyte tree specifcity. We performed a pilot study to investigate why epiphytic orchids prefer or avoid certain trees. We selected two orchid species, Panisea unifora and Bulbophyllum odoratissimum co-occurring in a forest habitat in southern China, where they showed a specifc association with Quercus yiwuensis and Pistacia weinmannifolia trees, respectively. We analysed a number of environmental factors potentially infuencing the relationship between orchids and trees. Diference in bark features, such as water holding capacity and pH were recorded between Q. yiwuensis and P. weinmannifolia, which could infuence both orchid seed germination and fungal diversity on the two phorophytes. Morphological and molecular culture-based methods, combined with metabarcoding analyses, were used to assess fungal communities associated with studied orchids and trees. A total of 162 fungal species in 74 genera were isolated from bark samples. Only two genera, Acremonium and Verticillium, were shared by the two phorophyte species. Metabarcoding analysis confrmed the presence of signifcantly diferent fungal communities on the investigated tree and orchid species, with considerable similarity between each orchid species and its host tree, suggesting that the orchid-host tree association is infuenced by the fungal communities of the host tree bark. Epiphytism is one of the most common examples of commensalism occurring in terrestrial environments, which provides advantages, such as less competition and increased access to light, protection from terrestrial herbivores, and better fower exposure to pollinators and seed dispersal 1,2. -
Orchid Historical Biogeography, Diversification, Antarctica and The
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Orchid historical biogeography, ARTICLE diversification, Antarctica and the paradox of orchid dispersal Thomas J. Givnish1*, Daniel Spalink1, Mercedes Ames1, Stephanie P. Lyon1, Steven J. Hunter1, Alejandro Zuluaga1,2, Alfonso Doucette1, Giovanny Giraldo Caro1, James McDaniel1, Mark A. Clements3, Mary T. K. Arroyo4, Lorena Endara5, Ricardo Kriebel1, Norris H. Williams5 and Kenneth M. Cameron1 1Department of Botany, University of ABSTRACT Wisconsin-Madison, Madison, WI 53706, Aim Orchidaceae is the most species-rich angiosperm family and has one of USA, 2Departamento de Biologıa, the broadest distributions. Until now, the lack of a well-resolved phylogeny has Universidad del Valle, Cali, Colombia, 3Centre for Australian National Biodiversity prevented analyses of orchid historical biogeography. In this study, we use such Research, Canberra, ACT 2601, Australia, a phylogeny to estimate the geographical spread of orchids, evaluate the impor- 4Institute of Ecology and Biodiversity, tance of different regions in their diversification and assess the role of long-dis- Facultad de Ciencias, Universidad de Chile, tance dispersal (LDD) in generating orchid diversity. 5 Santiago, Chile, Department of Biology, Location Global. University of Florida, Gainesville, FL 32611, USA Methods Analyses use a phylogeny including species representing all five orchid subfamilies and almost all tribes and subtribes, calibrated against 17 angiosperm fossils. We estimated historical biogeography and assessed the