Geometrical Approach to Central Molecular Chirality: a Chirality Selection Rule
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Chirality in the Plane
Chirality in the plane Christian G. B¨ohmer1 and Yongjo Lee2 and Patrizio Neff3 October 15, 2019 Abstract It is well-known that many three-dimensional chiral material models become non-chiral when reduced to two dimensions. Chiral properties of the two-dimensional model can then be restored by adding appropriate two-dimensional chiral terms. In this paper we show how to construct a three-dimensional chiral energy function which can achieve two-dimensional chirality induced already by a chiral three-dimensional model. The key ingredient to this approach is the consideration of a nonlinear chiral energy containing only rotational parts. After formulating an appropriate energy functional, we study the equations of motion and find explicit soliton solutions displaying two-dimensional chiral properties. Keywords: chiral materials, planar models, Cosserat continuum, isotropy, hemitropy, centro- symmetry AMS 2010 subject classification: 74J35, 74A35, 74J30, 74A30 1 Introduction 1.1 Background A group of geometric symmetries which keeps at least one point fixed is called a point group. A point group in d-dimensional Euclidean space is a subgroup of the orthogonal group O(d). Naturally this leads to the distinction of rotations and improper rotations. Centrosymmetry corresponds to a point group which contains an inversion centre as one of its symmetry elements. Chiral symmetry is one example of non-centrosymmetry which is characterised by the fact that a geometric figure cannot be mapped into its mirror image by an element of the Euclidean group, proper rotations SO(d) and translations. This non-superimposability (or chirality) to its mirror image is best illustrated by the left and right hands: there is no way to map the left hand onto the right by simply rotating the left hand in the plane. -
Chirality and Projective Linear Groups
DISCRETE MATHEMATICS Discrete Mathematics 131 (1994) 221-261 Chirality and projective linear groups Egon Schultea,l, Asia IviC Weissb**,’ “Depurtment qf Mathematics, Northeastern Uniwrsity, Boston, MA 02115, USA bDepartment qf Mathematics and Statistics, York University, North York, Ontario, M3JIP3, Camda Received 24 October 1991; revised 14 September 1992 Abstract In recent years the term ‘chiral’ has been used for geometric and combinatorial figures which are symmetrical by rotation but not by reflection. The correspondence of groups and polytopes is used to construct infinite series of chiral and regular polytopes whose facets or vertex-figures are chiral or regular toroidal maps. In particular, the groups PSL,(Z,) are used to construct chiral polytopes, while PSL,(Z,[I]) and PSL,(Z,[w]) are used to construct regular polytopes. 1. Introduction Abstract polytopes are combinatorial structures that generalize the classical poly- topes. We are particularly interested in those that possess a high degree of symmetry. In this section, we briefly outline some definitions and basic results from the theory of abstract polytopes. For details we refer to [9,22,25,27]. An (abstract) polytope 9 ofrank n, or an n-polytope, is a partially ordered set with a strictly monotone rank function rank( .) with range { - 1, 0, . , n}. The elements of 9 with rankj are called j-faces of 8. The maximal chains (totally ordered subsets) of .P are calledJags. We require that 6P have a smallest (- 1)-face F_ 1, a greatest n-face F,, and that each flag contains exactly n+2 faces. Furthermore, we require that .Y be strongly flag-connected and that .P have the following homogeneity property: when- ever F<G, rank(F)=j- 1 and rank(G)=j+l, then there are exactly two j-faces H with FcH-cG. -
Synthesis of Axially Chiral Biaryl Compounds by Asymmetric Catalytic Reactions with Transition Metals Pauline Loxq, E
Synthesis of axially chiral biaryl compounds by asymmetric catalytic reactions with transition metals Pauline Loxq, E. Manoury, Rinaldo Poli, Éric Deydier, A. Labande To cite this version: Pauline Loxq, E. Manoury, Rinaldo Poli, Éric Deydier, A. Labande. Synthesis of axially chiral biaryl compounds by asymmetric catalytic reactions with transition metals. Coordination Chemistry Re- views, Elsevier, 2016, 308, Part 2, pp.131-190. 10.1016/j.ccr.2015.07.006. hal-01929757 HAL Id: hal-01929757 https://hal.archives-ouvertes.fr/hal-01929757 Submitted on 1 Mar 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Synthesis of axially chiral biaryl compounds by asymmetric catalytic reactions with transition metals Pauline Loxq, a,b Eric Manoury,a,b Rinaldo Poli,a,b,c Eric Deydier a,b,d,* and Agnès Labande a,b,* a CNRS, LCC (Laboratoire de Chimie de Coordination), 205 route de Narbonne, BP 44099, F-31077 Toulouse Cedex 4, France. b Université de Toulouse, UPS, INPT, F-31077 Toulouse Cedex 4, France. c Institut Universitaire de France, 103, bd Saint-Michel, 75005 Paris, France. d IUT A Paul Sabatier, Departement de Chimie, Avenue Georges Pompidou, CS 20258, F- 81104 Castres Cedex, France Dedicated to the memory of our colleague and friend Guy Lavigne (1947-2015). -
Chapter 8. Chiral Catalysts José M
Chapter 8. Chiral Catalysts José M. Fraile, José I. García, José A. Mayoral 1. The Origin of Enantioselectivity in Catalytic Processes: the Nanoscale of Enantioselective Catalysis. Enantiomerically pure compounds are extremely important in fields such as medicine and pharmacy, nutrition, or materials with optical properties. Among the different methods to obtain enantiomerically pure compounds, asymmetric catalysis1 is probably the most interesting and challenging, in fact one single molecule of chiral catalyst can transfer its chiral information to thousands or even millions of new chiral molecules. Enantioselective reactions are the result of the competition between different possible diastereomeric reaction pathways, through diastereomeric transition states, when the prochiral substrate complexed to the chiral catalyst reacts with the corresponding reagent. The efficiency of the chirality transfer, measured as enantiomeric excess [% ee = (R−S)/(R+S) × 100], depends on electronic and steric factors in a very subtle form. A simple calculation shows that differences in energy of only 2 kcal/mol between these transition states are enough to obtain more than 90% ee, and small changes in any of the participants in the catalytic process can modify significantly this difference in energy. Those modifications may occur in the near environment of the catalytic centre, at less than 1 nm scale, but also at longer distances in the catalyst, substrate, reagent, solvent, or support in the case of immobilized catalysts. This is the reason because asymmetric -
Helicoselective Synthesis of Dioxa[6]Helicenes and Design of Orginal P-Stereogenic Brønsted Acid Organocatalystsx
Helicoselective Synthesis of Dioxa[6]helicenes and Design of Orginal P-Stereogenic Brønsted Acid Organocatalystsx. Peng Liu To cite this version: Peng Liu. Helicoselective Synthesis of Dioxa[6]helicenes and Design of Orginal P-Stereogenic Brøn- sted Acid Organocatalystsx.. Organic chemistry. Ecole Centrale Marseille, 2020. English. NNT : 2020ECDM0004. tel-03127048 HAL Id: tel-03127048 https://tel.archives-ouvertes.fr/tel-03127048 Submitted on 1 Feb 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. N° BU: ……………….. THÈSE Helicoselective Synthesis of Dioxa[6]helicenes and Design of Original P-Stereogenic Brønsted Acid Organocatalysts Présentée par Peng LIU Pour obtenir le grade de Docteur en Sciences de l'Université Aix-Marseille Spécialité : Chimie Organique École Doctorale des Sciences Chimiques - ED 250 Institut des Sciences Moléculaires de Marseille (iSm2)-UMR 7313 Équipe Synthèse Totale et Réactivité Organique (STeRéO) Soutenue publiquement le 21 septembre 2020 devant la commission d’examen composée de : Dr Angela MARINETTI, Institut de Chimie des Substances Naturelles (ICSN) Rapporteur Pr Jieping ZHU, École Polytechnique Fédérale de Lausanne (EPFL) Rapporteur Pr José Luis VICARIO, University of the Basque Country Examinateur Pr. Alexandre MARTINEZ, Aix Marseille Université Examinateur Pr. -
2017 Zhang Separation.Pdf
Journal of Pharmaceutical Analysis 7 (2017) 156–162 Contents lists available at ScienceDirect Journal of Pharmaceutical Analysis journal homepage: www.elsevier.com/locate/jpa Original Research Article Separation of atropisomers by chiral liquid chromatography and MARK thermodynamic analysis of separation mechanism ⁎ Ling Zhanga, , Yue Hub, Elizabeth Galellab, Frank P. Tomasellab, William P. Fishb a Chemical and Synthetic Development, Bristol-Myers Squibb Co., New Brunswick, NJ 08903, USA b Drug Product Science and Technology, Bristol-Myers Squibb Co., New Brunswick, NJ 08903, USA ARTICLE INFO ABSTRACT Keywords: In the pharmaceutical industry, the analysis of atropisomers is of considerable interest from both scientific and Atropisomer separation regulatory perspectives. The compound of interest contains two stereogenic axes due to the hindered rotation Chiral HPLC around the single bonds connecting the aryl groups, which results in four potential configurational isomers Thermodynamic parameters (atropisomers). The separation of the four atropisomers was achieved on a derivatized β-cyclodextrin bonded β-cyclodextrin stationary phase stationary phase. Further investigation showed that low temperature conditions, including sample preparation Chiral separation mechanism (−70 °C), sample storage (−70 °C), and chromatographic separation (6 °C), were critical to preventing interconversion. LC-UV-laser polarimetric analysis identified peaks 1 and 2 as a pair of enantiomers and peaks 3 and 4 as another. Thermodynamic analysis of the retention data indicated that the separation of the pairs of enantiomers is primarily enthalpy controlled as indicated by the positive slope of the van’tHuff plot. The difference in absolute Δ (Δ H), ranged from 2.20 kJ/mol to 2.42 kJ/mol. 1. Introduction rotation around the hindered axial bond [20]. -
A Tool for Chirality Control in Asymmetric Catalysis
Flexibility – A Tool for Chirality Control in Asymmetric Catalysis Raivis Žalubovskis Doctoral Thesis Stockholm 2006 Akademisk avhandling som med tillstånd av Kungl Tekniska Högskolan i Stockholm framlägges till offentlig granskning för avläggande av filosofie doktorsexamen i kemi med inrikting mot organisk kemi, måndagen den 27 november, kl 10.00 i sal F3, KTH, Lindstedtsvägen 26, Stockholm. Avhandlingen försvaras på engelska. Opponent är Professor Alexandre Alexakis, Université de Genève, Schweiz. ISBN 91-7178-491-8 ISRN KTH/IOK/FR--06/104--SE ISSN 1100-7974 TRITA-IOK Forskningsrapport 2006:104 © Raivis Zalubovskis Universitetsservice US AB, Stockholm Zalubovskis, R. 2006 ”Flexibility – A Tool for Chirality Control in Asymmetric Catalysis”, Organic Chemistry, KTH Chemical Science and Engineering, SE-100 44 Stockholm, Sweden. Abstract This thesis deals with the design and synthesis of ligands for asymmetric catalysis: palladium catalyzed allylic alkylations, and rho- dium and iridium catalyzed hydrogenations of olefins. Chirally flexible phosphepine ligands based on biphenyl were synthesized and their properties were studied. The rotation barrier for configurationally flexible phosphepines was determined by NMR spectroscopy. The ratio of the atropisomers was shown to depend on the group bound to phosphorus. Only complexes with two homochiral ligands bound to the metal center were observed upon complexation with Rh(I). It was shown that one diastereomer of the flexible ligand exhibits higher activity but lower selectivity than its diastereomer in the rhodium catalyzed hydrogenation of methyl α-acetamido- cinnamate. These ligands were also tested in nickel catalyzed silabora- tions. Chiral P,N-ligands with pseudo-C2 and pseudo-CS symmetry based on pyrrolidines-phospholanes or azepines-phosphepines were synthesized and studied in palladium catalyzed allylic alkylations. -
Chiral Icosahedral Hinge Elastegrity's Geometry of Motion
Chiral Icosahedral Hinge Elastegrity’s Geometry of Motion Eleftherios Pavlides, PhD AIA Roger Williams University1, Peter Fauci, Roger Williams University [email protected] 401 662 7521 Introduction Hinge Elastegrity, Definitions and Transformations Presented at G4G12 2a. 2 pairs 2b. 3 orthogonal H H 3.b 2 hypotenuse elastic of moving isosceles triangle faces hinges link each of 2 triangles for each of 8 irregular tetrahedra frame each tetrahedra 3c. isosceles leg elastic of 6 gates 3.a 4 free isosceles legss hinging pairs of right Fig.1 (left) edges per gate (6 gates) triangles forming 6-strut s 12 springs 24-cable Fig.2 Chiral Icosahedral nodal Hinge elastegrity rigid & Fig.3 Chiral Icosahedral tensegrity moving parts Hinge elastegrity rigid & hinges & gate edges The object that gave rise to the math in this paper is “hinge elastegrities”, a class of structures that originally arose from two Bauhaus exercises assigned at the Yale School of Architecture in the 1970’s and investigated in a series of art projects. The key new object obtained in 1982 involved cutting slits into folded pieces of paper and weaving them into 8 irregular tetrahedra, each with 3 isosceles right-triangle faces outlining an equilateral face fig.2b The 8 tetrahedra are suspended with 12 pairs of moving isosceles-right-triangles, congruent to the tetrahedral face right triangles fig.2a giving rise to an icosahedral shape (not necessarily regular) fig.2. Each pair of right triangles is attached to each other with an elastic hinge, along one of its isosceles legs fig.2a that act as springs. -
A Chirality-Based Quantum Leap: a Forward-Looking Review Arxiv
A Chirality-Based Quantum Leap: A Forward-Looking Review Clarice D. Aiello,∗,y,z Muneer Abbas,{ John Abendroth,x Amartya S. Banerjee,k,y David Beratan,? Jason Belling,y,# Bertrand Berche,@ Antia Botana,4 Justin R. Caram,# Luca Celardo,r Gianaurelio Cuniberti,yy Arezoo Dianat,yy Yuqi Guo,zz Rafael Gutierrez,yy Carmen Herrmann,{{ Josh Hihath,xx Suneet Kale,kk Philip Kurian,?? Ying-Cheng Lai,## Ernesto Medina,@@ Vladimiro Mujica,kk Ron Naaman,44 Mohammadreza Noormandipour,y,z Julio Palma,rrr Yossi Paltiel,y y y William Petuskey,kk Jo~aoCarlos Ribeiro-Silva,z z z Dominik Stemer,y,k Ana Valdes-Curiel,y,z Solmar Varela,{{{ David Waldeck,xxx Paul S. Weiss,y,k Helmut Zacharias,kkk and Qing Hua Wang∗,zz E-mail: [email protected]; [email protected] y California NanoSystems Institute, University of California, Los Angeles, Los Angeles, CA, USA, 90095 z Department of Electrical and Computer Engineering, University of California, Los An- geles, Los Angeles, CA, USA, 90095 arXiv:2009.00136v1 [cond-mat.mes-hall] 31 Aug 2020 { Department of Microbiology, Howard University, Washington, DC, USA, 20059 x Department of Materials Science and Engineering, Stanford University, Stanford, CA, USA, 94305 k Department of Materials Science and Engineering, University of California, Los Angeles, Los Angeles, CA, USA, 90095 1 ? Department of Chemistry, Duke University, Durham, NC, USA, 27708 # Department of Chemistry & Biochemistry, University of California, Los Angeles, Los Angeles, CA, USA, 90095 @ Laboratoire de Physique et Chimie Thoriques, UMR Universit´ede Lorraine-CNRS, -
Symmetry and Chirality in Discrete Structures
Symmetry and chirality in discrete structures Marston Conder University of Auckland, New Zealamd UW Math Day, Seattle, March 2013 Where is New Zealand? What is New Zealand famous for? • Great place to live (South Pacific) • Multi-cultural (European, Maori/Polynesian, Asian ...) • Beautiful scenery (beaches, volcanoes, lakes, mountains) • Kiwis (strange little birds), kiwi fruit (strange little fruit) • Dairy produce (milk, butter, cheese, etc.) • Film sites (Lord of the Rings, The Hobbit, Narnia, etc.) • Rugby football • Extreme sports (bungy-jumping, white-water rafting, etc.) What is symmetry? Symmetry can mean many different things, such as balance, uniform proportion, harmony, or congruence Generally, an object has symmetry if it can be transformed in way that leaves it looking the same as it did originally. Symmetry can be reflective: ... or rotational: ... or translational: ... or a combination of these types Examples of these kinds of symmetry abound in nature ... but have also been manufactured by human fascination and enterprise e.g. the Platonic solids (c. 360BC) or earlier ... the `Neolithic Scots' (c. 2000BC) ... as publicised by Atiyah and Sutcliffe (2003) ... but unfortunately a hoax! The claim that the Scots knew about these five regular solids over 1000 years before Plato was based on the above five `Scottish stones' at the Ashmolean Museum in Oxford | but one has 14 faces, and none of them is an icosahedron [See John Baez's website for the full story] Tilings at the Alhambra Palace { on its walls, floors, ceilings, and even some of the furniture { amazingly exhibit all of the 17 \wallpaper symmetries" (in two dimensions) [Rafael P´erezG´omezand Jos´eMara Montesinos, 1980s] Symmetry can induce strength and stability: .. -
On the Study of Chirality of Knots Through Polynomial Invariants
Treball final de grau GRAU DE MATEMÀTIQUES Facultat de Matemàtiques i Informàtica Universitat de Barcelona KNOT THEORY: On the study of chirality of knots through polynomial invariants Autor: Sergi Justiniano Claramunt Director: Dr. Javier José Gutiérrez Marín Realitzat a: Departament de Matemàtiques i Informàtica Barcelona, January 18, 2019 Contents Abstract ii Introduction iii 1 Mathematical bases 1 1.1 Definition of a knot . .1 1.2 Equivalence of knots . .4 1.3 Knot projections and diagrams . .6 1.4 Reidemeister moves . .8 1.5 Invariants . .9 1.6 Symmetries, properties and generation of knots . 11 1.7 Tangles and Conway notation . 12 2 Jones Polynomial 15 2.1 Introduction . 15 2.2 Rules of bracket polynomial . 16 2.3 Writhe and invariance of Jones polynomial . 18 2.4 Main theorems and applications . 22 3 HOMFLY and Kauffman polynomials on chirality detection 25 3.1 HOMFLY polynomial . 25 3.2 Kauffman polynomial . 28 3.3 Testing chirality . 31 4 Conclusions 33 Bibliography 35 i Abstract In this project we introduce the theory of knots and specialize in the compu- tation of the knot polynomials. After presenting the Jones polynomial, its two two-variable generalizations are also introduced: the Kauffman and HOMFLY polynomial. Then we study the ability of these polynomials on detecting chirality, obtaining a knot not detected chiral by the HOMFLY polynomial, but detected chiral by the Kauffman polynomial. Introduction The main idea of this project is to give a clear and short introduction to the theory of knots and in particular the utility of knot polynomials on detecting chirality of knots. -
Chirality: the Handedness of Molecules
06 Chirality: The Handedness of Molecules Tartaric acid is found in grapes and other fruits, both free and as its salts (see Section 6.4B). Inset: A model of tartaric acid. (© fatihhoca/iStockphoto) KEY QUESTIONS 6.1 What Are Stereoisomers? 6.9 What Is the Significance of Chirality in the 6.2 What Are Enantiomers? Biological World? 6.3 How Do We Designate the Configuration of a 6.10 How Can Enantiomers Be Resolved? Stereocenter? HOW TO 6.4 What Is the 2n Rule? 6.1 How to Draw Enantiomers 6.5 How Do We Describe the Chirality of 6.2 How to Determine the R & S Configuration Cyclic Molecules with Two Stereocenters? without Rotating the Molecule 6.6 How Do We Describe the Chirality 6.3 How to Determine Whether Two Compounds Are of Molecules with Three or More the Same, Enantiomers, or Diastereomers without Stereocenters? the Need to Spatially Manipulate the Molecule 6.7 What Are the Properties of Stereoisomers? 6.8 How Is Chirality Detected in the CHEMICAL CONNECTIONS Laboratory? 6A Chiral Drugs IN THIS CHAPTER, we will explore the relationships between three-dimensional ob- jects and their mirror images. When you look in a mirror, you see a reflection, or mirror Mirror image The reflection image, of yourself. Now, suppose your mirror image becomes a three-dimensional object. of an object in a mirror. 167 168 CHAPTER 6 Chirality: The Handedness of Molecules We could then ask, “What is the relationship between you and your mirror image?” By relationship, we mean “Can your reflection be superposed on the original ‘you’ in such a way that every detail of the reflection corresponds exactly to the original?” The answer is that you and your mirror image are not superposable.