Under Which Conditions Is Character Displacement a Likely Outcome of Secondary Contact? R
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Novel Trophic Niches Drive Variable Progress Towards Ecological Speciation Within an Adaptive Radiation of Pupfishes
Molecular Ecology (2014) 23, 1846–1862 doi: 10.1111/mec.12658 Novel trophic niches drive variable progress towards ecological speciation within an adaptive radiation of pupfishes CHRISTOPHER H. MARTIN*† and LAURA C. FEINSTEIN†‡ *Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA 94720, USA, †Department of Evolution & Ecology, University of California, Davis, CA 94616, USA, ‡California Council on Science and Technology, 1130 K Street, Sacramento, CA 95814, USA Abstract Adaptive radiation is recognized by a rapid burst of phenotypic, ecological and species diversification. However, it is unknown whether different species within an adaptive radiation evolve reproductive isolation at different rates. We compared patterns of genetic differentiation between nascent species within an adaptive radiation of Cyprin- odon pupfishes using genotyping by sequencing. Similar to classic adaptive radiations, this clade exhibits rapid morphological diversification rates and two species are novel trophic specialists, a scale-eater and hard-shelled prey specialist (durophage), yet the radiation is <10 000 years old. Both specialists and an abundant generalist species all coexist in the benthic zone of lakes on San Salvador Island, Bahamas. Based on 13 912 single-nucleotide polymorphisms (SNPs), we found consistent differences in genetic differentiation between each specialist species and the generalist across seven lakes. The scale-eater showed the greatest genetic differentiation and clustered by species across lakes, whereas durophage populations often clustered with sympatric generalist populations, consistent with parallel speciation across lakes. However, we found strong evidence of admixture between durophage populations in different lakes, sup- porting a single origin of this species and genome-wide introgression with sympatric generalist populations. -
Speciation in Heliconius Butterflies: Minimal Contact Followed 2 by Millions of Generations of Hybridisation 3 Simon H
bioRxiv preprint doi: https://doi.org/10.1101/015800; this version posted March 2, 2015. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 1 Speciation in Heliconius Butterflies: Minimal Contact Followed 2 by Millions of Generations of Hybridisation 3 Simon H. Martin*1, Anders Eriksson*1,2, Krzysztof M. Kozak1, Andrea Manica1 and 4 Chris D. Jiggins1 5 1 Department of Zoology, University of Cambridge, Downing Street, Cambridge, CB2 6 3EJ, United Kingdom 7 2 Integrative Systems Biology Laboratory, King Abdullah University of Science 8 and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia 9 * These authors contributed equally 10 Corresponding Author: S.H. Martin, [email protected] 11 Running Head: Change in the rate of gene flow during butterfly speciation bioRxiv preprint doi: https://doi.org/10.1101/015800; this version posted March 2, 2015. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 2 12 Abstract 13 Documenting the full extent of gene flow during speciation poses a challenge, as 14 species ranges change over time and current rates of hybridisation might not reflect 15 historical trends. Theoretical work has emphasized the potential for speciation in the 16 face of ongoing hybridisation, and the genetic mechanisms that might facilitate this 17 process. -
Can Secondary Contact Following Range Expansion Be Distinguished from Barriers to Gene flow?
Can secondary contact following range expansion be distinguished from barriers to gene flow? Johanna Bertl1,2, Harald Ringbauer3,4 and Michael G.B. Blum5 1 Department of Molecular Medicine, Aarhus University, Aarhus, Denmark 2 Vienna Graduate School of Population Genetics, Vetmeduni Vienna, Vienna, Austria 3 Department of Human Genetics, University of Chicago, Chicago, IL, USA 4 Institute of Science and Technology Austria, Klosterneuburg, Austria 5 Laboratoire TIMC-IMAG, UMR 5525, Université Grenoble Alpes, CNRS, Grenoble, France ABSTRACT Secondary contact is the reestablishment of gene flow between sister populations that have diverged. For instance, at the end of the Quaternary glaciations in Europe, secondary contact occurred during the northward expansion of the populations which had found refugia in the southern peninsulas. With the advent of multi-locus markers, secondary contact can be investigated using various molecular signatures including gradients of allele frequency, admixture clines, and local increase of genetic differentiation. We use coalescent simulations to investigate if molecular data provide enough information to distinguish between secondary contact following range expansion and an alternative evolutionary scenario consisting of a barrier to gene flow in an isolation-by-distance model. We find that an excess of linkage disequilibrium and of genetic diversity at the suture zone is a unique signature of secondary contact. We also find that the directionality index c, which was proposed to study range expansion, is informative to distinguish between the two hypotheses. However, although evidence for secondary contact is usually conveyed by statistics related to admixture coefficients, we find that they can be confounded by isolation-by-distance. We recommend to account for the spatial repartition of fl Submitted 29 November 2016 individuals when investigating secondary contact in order to better re ect the Accepted 1 July 2018 complex spatio-temporal evolution of populations and species. -
Microevolution: Species Concept Core Course: ZOOL3014 B.Sc. (Hons’): Vith Semester
Microevolution: Species concept Core course: ZOOL3014 B.Sc. (Hons’): VIth Semester Prof. Pranveer Singh Clines A cline is a geographic gradient in the frequency of a gene, or in the average value of a character Clines can arise for different reasons: • Natural selection favors a slightly different form along the gradient • It can also arise if two forms are adapted to different environments separated in space and migration (gene flow) takes place between them Term coined by Julian Huxley in 1838 Geographic variation normally exists in the form of a continuous cline A sudden change in gene or character frequency is called a stepped cline An important type of stepped cline is a hybrid zone, an area of contact between two different forms of a species at which hybridization takes place Drivers and evolution of clines Two populations with individuals moving between the populations to demonstrate gene flow Development of clines 1. Primary differentiation / Primary contact / Primary intergradation Primary differentiation is demonstrated using the peppered moth as an example, with a change in an environmental variable such as sooty coverage of trees imposing a selective pressure on a previously uniformly coloured moth population This causes the frequency of melanic morphs to increase the more soot there is on vegetation 2. Secondary contact / Secondary intergradation / Secondary introgression Secondary contact between two previously isolated populations Two previously isolated populations establish contact and therefore gene flow, creating an -
Coupling, Reinforcement, and Speciation Roger Butlin, Carole Smadja
Coupling, Reinforcement, and Speciation Roger Butlin, Carole Smadja To cite this version: Roger Butlin, Carole Smadja. Coupling, Reinforcement, and Speciation. American Naturalist, Uni- versity of Chicago Press, 2018, 191 (2), pp.155-172. 10.1086/695136. hal-01945350 HAL Id: hal-01945350 https://hal.archives-ouvertes.fr/hal-01945350 Submitted on 5 Dec 2018 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License vol. 191, no. 2 the american naturalist february 2018 Synthesis Coupling, Reinforcement, and Speciation Roger K. Butlin1,2,* and Carole M. Smadja1,3 1. Stellenbosch Institute for Advanced Study, Wallenberg Research Centre at Stellenbosch University, Stellenbosch 7600, South Africa; 2. Department of Animal and Plant Sciences, The University of Sheffield, Sheffield S10 2TN, United Kingdom; and Department of Marine Sciences, University of Gothenburg, Tjärnö SE-45296 Strömstad, Sweden; 3. Institut des Sciences de l’Evolution, Unité Mixte de Recherche 5554 (Centre National de la Recherche Scientifique–Institut de Recherche pour le Développement–École pratique des hautes études), Université de Montpellier, 34095 Montpellier, France Submitted March 15, 2017; Accepted August 28, 2017; Electronically published December 15, 2017 abstract: During the process of speciation, populations may di- Introduction verge for traits and at their underlying loci that contribute barriers Understanding how reproductive isolation evolves is key fl to gene ow. -
Testing Island Biogeography Theory with an Eco-Evolutionary
bioRxiv preprint doi: https://doi.org/10.1101/100289; this version posted January 13, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 1 Original Article 2 Effects of time and isolation on plant diversity: testing island biogeography 3 theory with an eco-evolutionary model 4 Authors: Juliano Sarmento Cabral1,2,3*, Robert J. Whittaker4,5, Kerstin Wiegand6, Holger Kreft2 5 1 Ecosystem Modeling, Center of Computation and Theoretical Biology, University of Würzburg, 6 Campus Hubland-Nord, Building 32, D- 97074, Würzburg, Germany. 7 2 Department of Biodiversity, Macroecology & Biogeography, University of Göttingen, 8 Büsgenweg 1, D-37077, Göttingen, Germany. 9 3 Synthesis Centre of the German Centre for Integrative Biodiversity Research (iDiv), Deutscher 10 Platz 5e, D-04103 Leipzig, Germany. 11 4 Conservation Biogeography and Macroecology Group, School of Geography and the 12 Environment, University of Oxford, South Parks Road, Oxford, OX1 3QY, UK. 13 5 Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, 14 University of Copenhagen, Universitetsparken 15, 2100 Copenhagen Ø, Denmark. 15 6 Ecosystem Modelling, Büsgen-Institute, University of Göttingen, Büsgenweg 4, D-37077, 16 Göttingen, Germany. 17 *Corresponding author: Ecosystem Modeling, Center for Computation and Theoretical Biology, 18 University of Würzburg, am Hubland-Nord 32, D- 97074, Würzburg, Germany. E-mail: 19 [email protected] 20 bioRxiv preprint doi: https://doi.org/10.1101/100289; this version posted January 13, 2017. -
Plant Speciation
PLANT SPECIATION Niarsi Merry Hemelda, M.Si. MK Keanekaragaman Tumbuhan Departemen Biologi FMIPA -UI OUTLINE: Evolution Modes of plant speciation Features of plant evolution Speciation EVOLUTION SPECIES The cumulative The basic biological change in the heritable unit around which characteristics of a classifications are population over time. based. Speciation: an evolutionary process by which a new species comes into being. Evolution Microevolution Macroevolution • Microevolution is a change in generally refers to evolution gene frequency in a population in above the species level. short period of time. • Processes that can directly affect gene frequencies in a population: (mutation, migration, genetic drift, non random mating, natural selection) Patterns of evolution: A. Divergent Evolution: the two species gradually become increasingly different. B. Convergent Evolution: species of different ancestry begin to share analogous traits because of a shared environment or other selection pressure C. Parallel Evolution: two species evolve independently of each other, maintaining the same level of similarity. Parallel evolution usually occurs between unrelated species that do not occupy the same or similar niches in a given habitat. How a new species originate: • Species are created by a series of evolutionary processes. • Classically, speciation has been viewed as a three stage process: oIsolation of populations. oDivergence in traits of separated populations (e.g. mating system or habitat use). oReproductive isolation of populations that maintains -
Sexual Selection and Speciation in Field Crickets
Sexual selection and speciation in field crickets David A. Gray* and William H. Cade† Department of Biological Sciences, Brock University, St. Catharines, ON, Canada L2S 3A1 Edited by Mary Jane West-Eberhard, Smithsonian Tropical Research Institute, Ciudad Universitaria, Costa Rica, and approved September 26, 2000 (received for review June 14, 2000) Recent theoretical work has shown that sexual selection may cause limited degree of postzygotic isolation (31–33)—have suggested speciation under a much wider range of conditions than previously to some authors the possibility of sexual selection driving supposed. There are, however, no empirical studies capable of speciation even in the absence of any pronounced hybrid infe- simultaneously evaluating several key predictions that contrast riority (see, e.g., refs. 28, 32–43). this with other speciation models. We present data on male pulse We report here our attempts to clarify the role of sexual rates and female phonotactic responses to pulse rates for the field selection in speciation. We present results from the North cricket Gryllus texensis; pulse rate is the key feature distinguishing American field cricket species Gryllus texensis (formerly Gryllus G. texensis from its cryptic sister species G. rubens. We show (i) integer) and Gryllus rubens. These species are ideal candidates for genetic variation in male song and in female preference for song, study: they are cryptic sister species with extensive areas of both (ii) a genetic correlation between the male trait and the female sympatry and allopatry, and prezygotic isolation appears to be preference, and (iii) no character displacement in male song, virtually complete, whereas postzygotic isolation appears to be female song recognition, female species-level song discrimination, virtually absent. -
Movement Rates of the Lizard Anolis Carolinensis (Squamata: Dactyloidae) in the Presence and Absence of Anolis Sagrei (Squamata
Movement Rates of the Lizard Anolis carolinensis (Squamata: Dactyloidae) in the Presence and Absence of Anolis sagrei (Squamata: Dactyloidae) Author(s): Ambika Kamath and Yoel E. Stuart Source: Breviora, 546(1):1-7. Published By: Museum of Comparative Zoology, Harvard University DOI: http://dx.doi.org/10.3099/0006-9698-546.00.1 URL: http://www.bioone.org/doi/full/10.3099/0006-9698-546.00.1 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/ page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non- commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. US ISSN 0006-9698 CAMBRIDGE,MASS. 17 JUNE 2015 NUMBER 546 MOVEMENT RATES OF THE LIZARD ANOLIS CAROLINENSIS (SQUAMATA: DACTYLOIDAE) IN THE PRESENCE AND ABSENCE OF ANOLIS SAGREI (SQUAMATA: DACTYLOIDAE) AMBIKA KAMATH1 AND YOEL E. STUART1,2 ABSTRACT. Shifts in a species’ habitat can be precipitated by co-occurring with a closely related, ecologically similar species, to avoid negative interspecific interactions. -
(Lepidoptera: Gracillariidae: Epicephala) and Leafflower Trees (Phyllanthaceae: Phyllanthus Sensu Lato [Glochidion]) in Southeastern Polynesia
Coevolutionary Diversification of Leafflower Moths (Lepidoptera: Gracillariidae: Epicephala) and Leafflower Trees (Phyllanthaceae: Phyllanthus sensu lato [Glochidion]) in Southeastern Polynesia By David Howard Hembry A dissertation submitted in partial satisfaction of the requirements for the degree of Doctor of Philosophy in Environmental Science, Policy, and Management in the Graduate Division of the University of California, Berkeley Committee in charge: Professor Rosemary Gillespie, Chair Professor Bruce Baldwin Professor Patrick O’Grady Spring 2012 1 2 Abstract Coevolution between phylogenetically distant, yet ecologically intimate taxa is widely invoked as a major process generating and organizing biodiversity on earth. Yet for many putatively coevolving clades we lack knowledge both of their evolutionary history of diversification, and the manner in which they organize themselves into patterns of interaction. This is especially true for mutualistic associations, despite the fact that mutualisms have served as models for much coevolutionary research. In this dissertation, I examine the codiversification of an obligate, reciprocally specialized pollination mutualism between leafflower moths (Lepidoptera: Gracillariidae: Epicephala) and leafflower trees (Phyllanthaceae: Phyllanthus sensu lato [Glochidion]) on the oceanic islands of southeastern Polynesia. Leafflower moths are the sole known pollinators of five clades of leafflowers (in the genus Phyllanthus s. l., including the genera Glochidion and Breynia), and thus this interaction is considered to be obligate. Female moths actively transfer pollen from male flowers to female flowers, using a haired proboscis to transfer pollen into the recessed stigmatic surface at the end of the fused stylar column. The moths then oviposit into the flowers’ ovaries, and the larva which hatches consumes a subset, but not all, of the developing fruit’s seed set. -
Ecological Character Displacement
Opinion Ecological character displacement: glass half full or half empty? 1 2 Yoel E. Stuart and Jonathan B. Losos 1 Museum of Comparative Zoology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA 2 Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford Street, Cambridge, MA 02138, USA Ecological character displacement (ECD), the evolution- meant to complement existing data on ECD: the evolution- ary divergence of competing species, has oscillated ary experiment. wildly in scientific opinion. Initially thought to play a central role in community assembly and adaptive radia- The rise, fall, and resurrection of ECD tion, ECD recovered from a 1980s nadir to present-day The rise of ECD during the 1950s and 1960s coincided with prominence on the strength of many case studies com- the focus of community ecology on interspecific competition piled in several influential reviews. However, we as a major player governing species interactions and com- reviewed recent studies and found that only nine of munity assembly. At that time, MacArthur [6] argued that 144 cases are strong examples that have ruled out alter- if not for differences in feeding times, canopy heights native explanations for an ECD-like pattern. We suggest occupied, and perches used, warbler species would have that the rise in esteem of ECD has outpaced available competitively excluded one another in northeast US coni- data and that more complete, rather than simply more, fer forests. Connell [7] showed that interspecific competi- case studies are needed. Recent years have revealed that tion structured intertidal barnacle communities, and evolutionary change can be observed as it occurs, open- Hutchinson [8] proposed that the regular beak-size differ- ing the door to experimental field studies as a new ences in sympatry among three species of Gala´pagos tree approach to studying ECD. -
The Present Status of the Competitive Exclusion Principle
TREE vol. 1, no. I, July 7986 could be expected to rise periodically some other nuclear power stations 6 Bumazyan, A./. f1975)At. Energi. 39, (particularly during the spring snow are beinq built much nearer to these 167-172 melting) for many years. cities than the Chernobyl station to 7 Mednik, LG., Tikhomirov, F.A., It is very likely that the Soviet Kiev. The Chernobvl disaster will Prokhorov, V.M. and Karaban, P.T. (1981) Ekologiya, no. 1,4C-45 Union, after some initial reluctance, affect future plans, and will certainly 8 Molchanova, I.V., and Karavaeva, E.N. will eventually adopt the same atti- make a serious impact on the nuclear (1981) Ekologiya, no. 5,86-88 tude towards nuclear power stations generating strategy in many other 9 Molchanova, I.V., Karavaeva, E.N., as was adopted by the United States countries as well. Chebotina. M.Ya., and Kulikov, N.V. after the long public enquiry into the (1982) Ekologiya, no. 2.4-g accident at Three Mile Island in 1979. 10 Buyanov, N.I. (1981) Ekologiya, no. 3, As well as ending the propaganda of Acknowledgements 66-70 the almost absolute safety of nuclear The author is grateful to Geoffrey R. 11 Nifontova, M.G., and Kulikov, N.V. Banks for reading the manuscript and for power plants and labelling them as (1981) Ekologiya, no. 6,94-96 comments and editorial assistance. 12 Kulikov, N.V. 11981) Ekologiya, no. 4, ‘potentially dangerous’, the US gov- 5-11 ernment also recommended that 13 Vennikov, V.A. (1975) In new nuclear power plants be located References Methodological Aspects of Study of in areas remote from concentrations 1 Medvedev, Z.A.