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Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
Uncovering Unique Green Algae and Cyanobacteria Isolated from Biocrusts in Highly Saline Potash Tailing Pile Habitats, Using an Integrative Approach
microorganisms Article Uncovering Unique Green Algae and Cyanobacteria Isolated from Biocrusts in Highly Saline Potash Tailing Pile Habitats, Using an Integrative Approach Veronika Sommer 1,2, Tatiana Mikhailyuk 3, Karin Glaser 1 and Ulf Karsten 1,* 1 Institute for Biological Sciences, Applied Ecology and Phycology, University of Rostock, 18059 Rostock, Germany; [email protected] (V.S.); [email protected] (K.G.) 2 upi UmweltProjekt Ingenieursgesellschaft mbH, 39576 Stendal, Germany 3 National Academy of Sciences of Ukraine, M.G. Kholodny Institute of Botany, 01601 Kyiv, Ukraine; [email protected] * Correspondence: [email protected] Received: 4 September 2020; Accepted: 22 October 2020; Published: 27 October 2020 Abstract: Potash tailing piles caused by fertilizer production shape their surroundings because of the associated salt impact. A previous study in these environments addressed the functional community “biocrust” comprising various micro- and macro-organisms inhabiting the soil surface. In that previous study, biocrust microalgae and cyanobacteria were isolated and morphologically identified amongst an ecological discussion. However, morphological species identification maybe is difficult because of phenotypic plasticity, which might lead to misidentifications. The present study revisited the earlier species list using an integrative approach, including molecular methods. Seventy-six strains were sequenced using the markers small subunit (SSU) rRNA gene and internal transcribed spacer (ITS). Phylogenetic analyses confirmed some morphologically identified species. However, several other strains could only be identified at the genus level. This indicates a high proportion of possibly unknown taxa, underlined by the low congruence of the previous morphological identifications to our results. In general, the integrative approach resulted in more precise species identifications and should be considered as an extension of the previous morphological species list. -
Compartmentalization of Mrnas in the Giant, Unicellular Green Algae
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.18.303206; this version posted September 18, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Compartmentalization of mRNAs in the giant, 2 unicellular green algae Acetabularia acetabulum 3 4 Authors 5 Ina J. Andresen1, Russell J. S. Orr2, Kamran Shalchian-Tabrizi3, Jon Bråte1* 6 7 Address 8 1: Section for Genetics and Evolutionary Biology, Department of Biosciences, University of 9 Oslo, Kristine Bonnevies Hus, Blindernveien 31, 0316 Oslo, Norway. 10 2: Natural History Museum, University of Oslo, Oslo, Norway 11 3: Centre for Epigenetics, Development and Evolution, Department of Biosciences, University 12 of Oslo, Kristine Bonnevies Hus, Blindernveien 31, 0316 Oslo, Norway. 13 14 *Corresponding author 15 Jon Bråte, [email protected] 16 17 Keywords 18 Acetabularia acetabulum, Dasycladales, UMI, STL, compartmentalization, single-cell, mRNA. 19 20 Abstract 21 Acetabularia acetabulum is a single-celled green alga previously used as a model species for 22 studying the role of the nucleus in cell development and morphogenesis. The highly elongated 23 cell, which stretches several centimeters, harbors a single nucleus located in the basal end. 24 Although A. acetabulum historically has been an important model in cell biology, almost 25 nothing is known about its gene content, or how gene products are distributed in the cell. To 26 study the composition and distribution of mRNAs in A. -
The Marine Vegetation of the Kerguelen Islands: History of Scientific Campaigns, Inventory of the Flora and First Analysis of Its Biogeographical Affinities
cryptogamie Algologie 2021 ● 42 ● 12 DIRECTEUR DE LA PUBLICATION / PUBLICATION DIRECTOR : Bruno DAVID Président du Muséum national d’Histoire naturelle RÉDACTRICE EN CHEF / EDITOR-IN-CHIEF : Line LE GALL Muséum national d’Histoire naturelle ASSISTANTE DE RÉDACTION / ASSISTANT EDITOR : Marianne SALAÜN ([email protected]) MISE EN PAGE / PAGE LAYOUT : Marianne SALAÜN RÉDACTEURS ASSOCIÉS / ASSOCIATE EDITORS Ecoevolutionary dynamics of algae in a changing world Stacy KRUEGER-HADFIELD Department of Biology, University of Alabama, 1300 University Blvd, Birmingham, AL 35294 (United States) Jana KULICHOVA Department of Botany, Charles University, Prague (Czech Republic) Cecilia TOTTI Dipartimento di Scienze della Vita e dell’Ambiente, Università Politecnica delle Marche, Via Brecce Bianche, 60131 Ancona (Italy) Phylogenetic systematics, species delimitation & genetics of speciation Sylvain FAUGERON UMI3614 Evolutionary Biology and Ecology of Algae, Departamento de Ecología, Facultad de Ciencias Biologicas, Pontificia Universidad Catolica de Chile, Av. Bernardo O’Higgins 340, Santiago (Chile) Marie-Laure GUILLEMIN Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia (Chile) Diana SARNO Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli (Italy) Comparative evolutionary genomics of algae Nicolas BLOUIN Department of Molecular Biology, University of Wyoming, Dept. 3944, 1000 E University Ave, Laramie, WY 82071 (United States) Heroen VERBRUGGEN School of BioSciences, -
Freshwater Algae in Britain and Ireland - Bibliography
Freshwater algae in Britain and Ireland - Bibliography Floras, monographs, articles with records and environmental information, together with papers dealing with taxonomic/nomenclatural changes since 2003 (previous update of ‘Coded List’) as well as those helpful for identification purposes. Theses are listed only where available online and include unpublished information. Useful websites are listed at the end of the bibliography. Further links to relevant information (catalogues, websites, photocatalogues) can be found on the site managed by the British Phycological Society (http://www.brphycsoc.org/links.lasso). Abbas A, Godward MBE (1964) Cytology in relation to taxonomy in Chaetophorales. Journal of the Linnean Society, Botany 58: 499–597. Abbott J, Emsley F, Hick T, Stubbins J, Turner WB, West W (1886) Contributions to a fauna and flora of West Yorkshire: algae (exclusive of Diatomaceae). Transactions of the Leeds Naturalists' Club and Scientific Association 1: 69–78, pl.1. Acton E (1909) Coccomyxa subellipsoidea, a new member of the Palmellaceae. Annals of Botany 23: 537–573. Acton E (1916a) On the structure and origin of Cladophora-balls. New Phytologist 15: 1–10. Acton E (1916b) On a new penetrating alga. New Phytologist 15: 97–102. Acton E (1916c) Studies on the nuclear division in desmids. 1. Hyalotheca dissiliens (Smith) Bréb. Annals of Botany 30: 379–382. Adams J (1908) A synopsis of Irish algae, freshwater and marine. Proceedings of the Royal Irish Academy 27B: 11–60. Ahmadjian V (1967) A guide to the algae occurring as lichen symbionts: isolation, culture, cultural physiology and identification. Phycologia 6: 127–166 Allanson BR (1973) The fine structure of the periphyton of Chara sp. -
Algologielgologie 2021 ● 42 ● 2 DIRECTEUR DE LA PUBLICATION / PUBLICATION DIRECTOR : Bruno DAVID Président Du Muséum National D’Histoire Naturelle
cryptogamie AAlgologielgologie 2021 ● 42 ● 2 DIRECTEUR DE LA PUBLICATION / PUBLICATION DIRECTOR : Bruno DAVID Président du Muséum national d’Histoire naturelle RÉDACTRICE EN CHEF / EDITOR-IN-CHIEF : Line LE GALL Muséum national d’Histoire naturelle ASSISTANTE DE RÉDACTION / ASSISTANT EDITOR : Marianne SALAÜN ([email protected]) MISE EN PAGE / PAGE LAYOUT : Marianne SALAÜN RÉDACTEURS ASSOCIÉS / ASSOCIATE EDITORS Ecoevolutionary dynamics of algae in a changing world Stacy KRUEGER-HADFIELD Department of Biology, University of Alabama, 1300 University Blvd, Birmingham, AL 35294 (United States) Jana KULICHOVA Department of Botany, Charles University, Prague (Czech Republic) Cecilia TOTTI Dipartimento di Scienze della Vita e dell’Ambiente, Università Politecnica delle Marche, Via Brecce Bianche, 60131 Ancona (Italy) Phylogenetic systematics, species delimitation & genetics of speciation Sylvain FAUGERON UMI3614 Evolutionary Biology and Ecology of Algae, Departamento de Ecología, Facultad de Ciencias Biologicas, Pontifi cia Universidad Catolica de Chile, Av. Bernardo O’Higgins 340, Santiago (Chile) Marie-Laure GUILLEMIN Instituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia (Chile) Diana SARNO Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli (Italy) Comparative evolutionary genomics of algae Nicolas BLOUIN Department of Molecular Biology, University of Wyoming, Dept. 3944, 1000 E University Ave, Laramie, WY 82071 (United States) Heroen VERBRUGGEN School of -
Green Algae Secondary Article
Green Algae Secondary article Mark A Buchheim, University of Tulsa, Tulsa, Oklahoma, USA Article Contents . Introduction The green algae comprise a large and diverse group of organisms that range from the . Major Groups microscopic to the macroscopic. Green algae are found in virtually all aquatic and some . Economic and Ecological Importance terrestrial habitats. Introduction generalization). The taxonomic and phylogenetic status of The green algae comprise a large and diverse group of the green plant group is supported by both molecular and organisms that range from the microscopic (e.g. Chlamy- nonmolecular evidence (Graham, 1993; Graham and domonas) to the macroscopic (e.g. Acetabularia). In Wilcox, 2000). This group of green organisms has been addition to exhibiting a considerable range of structural termed the Viridaeplantae or Chlorobionta. Neither the variability, green algae are characterized by extensive euglenoids nor the chlorarachniophytes, both of which ecological diversity. Green algae are found in virtually all have apparently acquired a green chloroplast by a aquatic (both freshwater and marine) and some terrestrial secondary endosymbiosis, are included in the green plant habitats. Although most are free-living, a number of green lineage (Graham and Wilcox, 2000). Furthermore, the algae are found in symbiotic associations with other Chloroxybacteria (e.g. Prochloron), which possess chlor- organisms (e.g. the lichen association between an alga ophyll a and b organized on thylakoids, are true and a fungus). Some green algae grow epiphytically (e.g. prokaryotes, and are not, therefore, included in the green Characiochloris, which grows on other filamentous algae plant lineage. The green algal division Chlorophyta forms or higher aquatic plants), epizoically (e.g. -
C Экологическая Генетика Tom Xi № 4 2013
Генетика ПОПуЛЯцИй И эволюцИЯ 23 УДК 577.21:577.632:582.263(282.256.341) © е. В. романова, л. С. кравцова, идентификация зеленых нитчатых водорослей л. А. ижболдина, и. В. Ханаев, из района локальноГо биоГенноГо заГрязнения д. Ю. Щербаков озера байкал (залив лиственничный) с помощью молекулярноГо маркера 18s рднк Лимнологический институт Сибирского отделения Российской академии наук (ЛИН СО РАН), Иркутск ВВедение C В заливе лиственничный Идентификация видов водорослей различных водных экосистем необхо- озера байкал впервые дима для решения многих фундаментальных и прикладных задач современной наблюдается явление локального биологии. Водоросли — индикаторы трофического статуса водоема и раз- эвтрофирования. с помощью личных видов загрязнения (Mohapatra, Mohanty, 1992; Prasanna et al., 2011; морфологического и молекулярно- Rai et al., 2008). Традиционно используемый способ идентификации водорос- генетического методов определены лей по их морфологическим признакам имеет ряд недостатков. Часто такое роды и виды нитчатых водорослей, определение трудоемко за счет того, что требует специального оборудования которые формируют обильные и условий, а также высокой квалификации исследователя. Поэтому предста- зоны обрастания дна участка озера, вителей некоторых таксонов водорослей удается определить только до рода. подверженного антропогенному Такая проблема возникает в частности при определении нитчатых водорослей воздействию. присутствие (Pang et al., 2010; Prasanna et al., 2011). видов рода Spirogyra link., не С развитием методов молекулярной биологии появилась возможность характерного для этой части озера, использовать для определения видов нуклеотидные последовательности раз- а также распространение их вместе личных генов, интронов и спейсеров — молекулярные маркеры (Hebert et al., с видом Ulothrix zonata (Web. et 2003). В настоящее время для идентификации водорослей используют mohr) Kütz. на нетипично большой пластидные (rbcL, tufA, atpB, matK, UPA) и ядерные (18S и 28S рДНК, глубине говорит о серьезном ITS1 и ITS2) маркеры. -
Checklist of Species Within the CCBNEP Study Area: References, Habitats, Distribution, and Abundance
Current Status and Historical Trends of the Estuarine Living Resources within the Corpus Christi Bay National Estuary Program Study Area Volume 4 of 4 Checklist of Species Within the CCBNEP Study Area: References, Habitats, Distribution, and Abundance Corpus Christi Bay National Estuary Program CCBNEP-06D • January 1996 This project has been funded in part by the United States Environmental Protection Agency under assistance agreement #CE-9963-01-2 to the Texas Natural Resource Conservation Commission. The contents of this document do not necessarily represent the views of the United States Environmental Protection Agency or the Texas Natural Resource Conservation Commission, nor do the contents of this document necessarily constitute the views or policy of the Corpus Christi Bay National Estuary Program Management Conference or its members. The information presented is intended to provide background information, including the professional opinion of the authors, for the Management Conference deliberations while drafting official policy in the Comprehensive Conservation and Management Plan (CCMP). The mention of trade names or commercial products does not in any way constitute an endorsement or recommendation for use. Volume 4 Checklist of Species within Corpus Christi Bay National Estuary Program Study Area: References, Habitats, Distribution, and Abundance John W. Tunnell, Jr. and Sandra A. Alvarado, Editors Center for Coastal Studies Texas A&M University - Corpus Christi 6300 Ocean Dr. Corpus Christi, Texas 78412 Current Status and Historical Trends of Estuarine Living Resources of the Corpus Christi Bay National Estuary Program Study Area January 1996 Policy Committee Commissioner John Baker Ms. Jane Saginaw Policy Committee Chair Policy Committee Vice-Chair Texas Natural Resource Regional Administrator, EPA Region 6 Conservation Commission Mr. -
Evolutionary Transitions Between States of Structural and Developmental Characters Among the Algal Charophyta (Viridiplantae)
ABSTRACT Title of Thesis: EVOLUTIONARY TRANSITIONS BETWEEN STATES OF STRUCTURAL AND DEVELOPMENTAL CHARACTERS AMONG THE ALGAL CHAROPHYTA (VIRIDIPLANTAE). Jeffrey David Lewandowski, Master of Science, 2004 Thesis Directed By: Associate Profe ssor, Charles F. Delwiche, Cell Biology and Molecular Genetics The Charophyta comprise green plant representatives ranging from familiar complex -bodied land plants to subtle and simple forms of green algae, presumably the closest phylogenetic relatives of land plants. This biological lineage provides a unique opportunity to investigate evolutionary transition series that likely facilitated once -aquatic green plants to colonize and diversify in terrestrial environments. A literature review summarizes fu ndamental structural and developmental transitions observed among the major lineages of algal Charophyta. A phylogenetic framework independent of morphological and ontological data is necessary for testing hypotheses about the evolution of structure and development. Thus, to further elucidate the branching order of the algal Charophyta, new DNA sequence data are used to test conflicting hypotheses regarding the phylogenetic placement of several enigmatic taxa, including the algal charophyte genera Mesosti gma , Chlorokybus, Coleochaete , and Chaetosphaeridium. Additionally, technical notes on developing RNA methods for use in studying algal Charophyta are included. EVOLUTIONARY TRANSITIONS BETWEEN STATES OF STRUCTURAL AND DEVELOPMENTAL CHARACTERS AMONG THE ALGAL CHAROPHYTA (VIRIDIPLANTAE). By Jeffrey David Lewandowski Thesis submitted to the Faculty of the Graduate School of the University of Maryland, College Park, in partial fulfillment of the requirements for the degree of Master of Science 2004 Advisory Committee: Associate Professor Charles F. Delwiche, Chair Professor Todd J. Cooke Assistant Professor Eric S. Haag © Copyright by Jeffrey D. Lewandowski 2004 Preface The following are examples from several of the works that have provided philosophical inspiration for this document. -
Aquatic Biology of the San Joaquin- Tulare Basins, California: Analysis of Available Data Through 1992
Aquatic Biology of the San Joaquin- Tulare Basins, California: Analysis of Available Data Through 1992 By LARRY R. BROWN Prepared in cooperation with the National Water-Quality Assessment Program U.S. GEOLOGICAL SURVEY WATER-SUPPLY PAPER 2471 U.S. DEPARTMENT OF THE INTERIOR BRUCE BABBITT, Secretary U.S. GEOLOGICAL SURVEY Gordon P. Eaton, Director Any use of trade, product, or firm names in this publication is for descriptive purposes only and does not imply endorsement by the U.S. Government. UNITED STATES GOVERNMENT PRINTING OFFICE, WASHINGTON: 1996 For sale by the U.S. Geological Survey Branch of Information Services Box 25286 Federal Center Denver, CO 80225-0286 Library of Congress Cataloging in Publication Data Brown, Larry R. Aquatic biology of the San Joaquin-Tulare Basins, California : Analysis of available data through 1992 / by Larry R. Brown ; prepared in cooperation with the National Water-Quality Assessment Program. p. cm. (U.S. Geological Survey water-supply paper ; 2471) Includes bibliographical references (p. ). 1 . Freshwater biology California San Joaquin River Watershed. 2. Freshwater biology California Tulare Lake Watershed. 3. Aquatic organisms Effect of water pollution on California San Joaquin River Watershed. 4. Aquatic organisms Effect of water pollution on California Tulare Lake Watershed I. National Water-Quality Assessment Program (U.S.) II. Title. III. Series QH105.C2B667 1996 574.92'9794'8 dc20 96-21432 CIP ISBN 0-607-8621 4-9 FOREWORD The mission of the U.S. Geological Survey Describe how water quality is changing over (USGS) is to assess the quantity and quality of the time. earth resources of the Nation and to provide informa Improve understanding of the primary natural tion that will assist resource managers and policymak- and human factors that affect water-quality ers at Federal, State, and local levels in making sound conditions. -
Codiolophyceae, a New Class of Chlorophyta
Helgoliinder wiss. Meeresunters. 25, 1-13 (1973) Codiolophyceae, a new class of Chlorophyta P. KORNMANN BioIogische AnstaIt Helgoland (Meeresstation); Helgoland, FederalRepublic of Germany KURZFASSUNG: Codiolophyceaen, eine neue Griinalgen-Klasse. ROUND (1971) gliedert die Chlorophyta in die Klassen der Zygnemaphyceae, Oedogoniophyceae, Bryopsldophyceae und Chlorophyceae. Ihnen fiige ich als weitere Klasse die Codiolophyceae zu. Sie vereinigt Formen mit heteromorphem Generationswechsei; ihr Sporophyt ist das einzellige Codiolum-Stadium. Zu der neuen Klasse gehSren die Uiotrichales, Monostromatales, Codiolales und Acro- siphoniales. Die Morphoiogie der Gametophyten zeigt eigene kennzeichnende Merkmale; sie trennen diese Ordnungen untereinander ebenso wie yon alien anderen Griinalgengruppen. Ge- melnsames Merkmal ist nicht nut das Vorhandensein des einzelligen Sporophyten, sondern auch dessen vSllig iiberelnstimmende Entwicklung. Bisher waren die Vertreter der obigen Ord- nungen in den verschiedensten Gruppen des Systems untergebracht, wo fie als FremdkSrper empfunden werden miissen. In der Zusammenfassung zu einer Klasse stelten sie dagegen eine wohlbegriindete systematische Einheit dar. INTRODUCTION Just at the time when the article of ROUND (197t) on "The Taxonomy of the Chlorophyta. II" was published, I presented details of my previously suggested (KoI~N- MANN 1970) concept of the new class of Codiolophyceae in Hamburg. As taxonomic problems and literature have been extensively discussed by ROUND, I am restricting this contribution to my own observations from culture work and consider it as an addition to ROUND'S paper. Some years ago, I referred to the importance of the Codiolum sporophyte as a fundamental character for the classification of some groups of green algae (KORNMANN 1963, 1965a). At that time, I also tried to find morphological similarities in the gametophytic phase, supporting the union of Ulotrichaceae, Monostromataceae and Codiolaceae in the order of the Ulotrichales.