Digeorge Syndrome: Bed to Bench to Bed
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Increased Burden of Deleterious Variants in Essential Genes in Autism Spectrum Disorder
Increased burden of deleterious variants in essential genes in autism spectrum disorder Xiao Jia,b, Rachel L. Kemberb, Christopher D. Brownb,1, and Maja Bucanb,c,1 aGenomics and Computational Biology Graduate Group, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104; bDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104; and cDepartment of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104 Edited by Eugene V. Koonin, National Institutes of Health, Bethesda, MD, and approved November 7, 2016 (received for review August 9, 2016) Autism spectrum disorder (ASD) is a heterogeneous, highly heritable and deleterious mutations, the functional impact of EGs is neurodevelopmental syndrome characterized by impaired social reflected by haploinsufficiency that is commonly observed in interaction, communication, and repetitive behavior. It is estimated heterozygous mutations (11, 15). In addition to their role in that hundreds of genes contribute to ASD. We asked if genes with a defining a “minimal gene set” (16, 17), EGs tend to play im- strong effect on survival and fitness contribute to ASD risk. Human portant roles in protein interaction networks (18). Therefore, orthologs of genes with an essential role in pre- and postnatal one may consider that EGs are involved in rate-limiting steps development in the mouse [essential genes (EGs)] are enriched for that affect a range of disease pathways (19). disease genes and under strong purifying selection relative to human Recently, three large-scale screens (gene trap and CRISPR- orthologs of mouse genes with a known nonlethal phenotype Cas9) have been performed to assess the effect of single-gene [nonessential genes (NEGs)]. -
Immunology in Pediatric Dentistry
PEDIATRIC DENTISTRY/Copynght© 1983 by The American Academy of Pedodontics/Vol. 5, No. 3 Immunology in pediatric dentistry William C. Donlon, DMD, MA Abstract The scope of clinical immunology is ever- usually are directed against a specific allergen and this increasing. A working knowledge of the immune substance will always invoke the same type of response system and its disease states is important in the although the severity may vary. Another variable is evalution and treatment of pediatric dental patients. whether the reaction is localized or generalized. This review focuses both on immune conditions with The antibody type which initiates the histamine- a possible iatrogenic origin, such as allergy, and releasing immediate atopic reaction is IgE. Molecule immune phenomena which the pedodontist may dimers of IgE adhere to most cells and basophils causing diagnose or treat as part of the medical team. degranulation and subsequent increase in extracellular levels of vasodilators such as histamine, slow-reacting substance - A, and the kinins. Clinical symptoms are "ue to advances in the science of immunology, pa- cutaneous wheal and flare, edema, rhinorrhea, tearing, tients with defects of the immune system are being possible respiratory embarrassment, and hypotension diagnosed earlier and living longer. The condition and/or (Figure 1). treatment modality may affect the patient's oral health Antihistamines are the most effective treatment in mild and delivery of dental care. On a more mundane level, cases. Active therapy of allergy may include induction of the pedodontist deals with the immune system daily when IgG antibody synthesis by multiple injections of minute inquiring about allergies and rheumatic fever in the quantities of the allergen. -
Ataxia..Telangiectasia and Cellular Responses to DNA Damage'
(CANCERRESEARCH55. 5991-6001. December 15, 19951 Review Ataxia..Telangiectasia and Cellular Responses to DNA Damage' M. Stephen Meyn2 Departments of Genetics and Pediatrics, Yale University School of Medicine, New Haven, connecticut 06510 Abstract elevated frequencies of spontaneous and induced chromosome aber rations, high spontaneous rates of intrachromosomal recombination, Ataxia-telangiectasia (A-T) is a human disease characterized by high aberrant immune gene rearrangements, and inability to arrest the cell cancer risk, immune defects, radiation sensitivity, and genetic instability. Although A-T homozygotes are rare, the A-T gene may play a role in cycle in response to DNA damage (3—6)]. sporadic breast cancer and other common cancers. Abnormalities of DNA The nature of the A-T defect has been the subject of much repair, genetic recombination, chromatin structure, and cell cycle check speculation; most hypotheses focus on the radiation sensitivity of point control have been proposed as the underlying defect in A-T; how A-T cells. Early reports that A-T fibroblasts were unable to excise ever, previous models cannot satisfactorily explain the plelotropic A-T radiation-induced DNA adducts prompted suggestions that the phenotype. radiation sensitivity of A-T cells was due to an intrinsic defect in Two recent observations help clarify the molecular pathology of A-T: DNA repair (7). However, subsequent work indicated that not all (a) inappropriate p53-mediated apoptosis is the major cause of death in A-T fibroblasts have a defect in DNA adduct excision (8), and that A-T cells irradiated in culture; and (b) ATM, the putative gene for A-T, has extensive homology to several celi cycle checkpoint genes from other the kinetics of repair of DNA breaks and chromosome aberrations organisms. -
Loss of One Allele of ARF Rescues Mdm2 Haploinsufficiency Effects On
Oncogene (2004) 23, 8931–8940 & 2004 Nature Publishing Group All rights reserved 0950-9232/04 $30.00 www.nature.com/onc Loss of one allele of ARF rescues Mdm2 haploinsufficiency effects on apoptosis and lymphoma development Christine M Eischen*,1,2, Jodi R Alt1,2 and Peng Wang1 1Eppley Institute for Research in Cancer, University of Nebraska Medical Center, Omaha, NE 68198, USA; 2Department of Pathology and Microbiology, University of Nebraska Medical Center, Omaha, NE 68198, USA The tumor suppressor p19ARF inhibits Mdm2, which ARF or p53is inactivated in over half of these tumors restricts the activity of p53. Complicated feedback and (Eischen et al., 1999). In addition, in lymphomas that control mechanisms regulate ARF, Mdm2, and p53 emerge in ARF þ /À or p53 þ /ÀEm-myc transgenics, the interactions. Here we report that ARF haploinsufficiency second allele of ARF or p53 is deleted in 77 or 100% of completely rescued the p53-dependent effects of Mdm2 these tumors, respectively (Eischen et al., 1999; Schmitt haploinsufficiency on B-cell development, survival, and et al., 1999). Therefore, ARF and p53guard against transformation. In contrast to Mdm2 þ /À B cells, Mdm2 þ /À oncogene-initiated tumorigenesis by activating apoptosis B cells deficient in ARF were similar to wild-type B cells in and consequently, are frequently targeted for inactiva- their rates of growth and apoptosis and activation of p53. tion in lymphomas that overexpress oncogenes. Consequently, the profoundly reduced numbers of B cells Mdm2 is a key intermediary in the ARF–p53tumor in Mdm2 þ /ÀEl-myc transgenic mice were restored to suppressor pathway. -
(Lcrs) in 22Q11 Mediate Deletions, Duplications, Translocations, and Genomic Instability: an Update and Literature Review Tamim H
review January/February 2001 ⅐ Vol. 3 ⅐ No. 1 Evolutionarily conserved low copy repeats (LCRs) in 22q11 mediate deletions, duplications, translocations, and genomic instability: An update and literature review Tamim H. Shaikh, PhD1, Hiroki Kurahashi, MD, PhD1, and Beverly S. Emanuel, PhD1,2 Several constitutional rearrangements, including deletions, duplications, and translocations, are associated with 22q11.2. These rearrangements give rise to a variety of genomic disorders, including DiGeorge, velocardiofacial, and conotruncal anomaly face syndromes (DGS/VCFS/CAFS), cat eye syndrome (CES), and the supernumerary der(22)t(11;22) syndrome associated with the recurrent t(11;22). Chromosome 22-specific duplications or low copy repeats (LCRs) have been directly implicated in the chromosomal rearrangements associated with 22q11.2. Extensive sequence analysis of the different copies of 22q11 LCRs suggests a complex organization. Examination of their evolutionary origin suggests that the duplications in 22q11.2 may predate the divergence of New World monkeys 40 million years ago. Based on the current data, a number of models are proposed to explain the LCR-mediated constitutional rearrangements of 22q11.2. Genetics in Medicine, 2001:3(1):6–13. Key Words: duplication, evolution, 22q11, deletion and translocation Although chromosome 22 represents only 2% of the haploid The 22q11.2 deletion syndrome, which includes DGS/ human genome,1 recurrent, clinically significant, acquired, VCFS/CAFS, is the most common microdeletion syndrome. and somatic -
Haploinsufficiency of Autism Spectrum Disorder Candidate Gene NUAK1 Impairs Cortical Development and Behavior in Mice
ARTICLE DOI: 10.1038/s41467-018-06584-5 OPEN Haploinsufficiency of autism spectrum disorder candidate gene NUAK1 impairs cortical development and behavior in mice Virginie Courchet1, Amanda J. Roberts2, Géraldine Meyer-Dilhet1, Peggy Del Carmine1, Tommy L. Lewis Jr 3, Franck Polleux 3 & Julien Courchet 1 fi 1234567890():,; Recently, numerous rare de novo mutations have been identi ed in patients diagnosed with autism spectrum disorders (ASD). However, despite the predicted loss-of-function nature of some of these de novo mutations, the affected individuals are heterozygous carriers, which would suggest that most of these candidate genes are haploinsufficient and/or lead to expression of dominant-negative forms of the protein. Here, we tested this hypothesis with the candidate ASD gene Nuak1 that we previously identified for its role in the development of cortical connectivity. We report that Nuak1 is haploinsufficient in mice with regard to its function in cortical development. Furthermore Nuak1+/− mice show a combination of abnormal behavioral traits ranging from defective spatial memory consolidation, defects in social novelty (but not social preference) and abnormal sensorimotor gating. Overall, our results demonstrate that Nuak1 haploinsufficiency leads to defects in the development of cortical connectivity and a complex array of behavorial deficits. 1 Univ Lyon, Université Claude Bernard Lyon 1, CNRS UMR-5310, INSERM U-1217, Institut NeuroMyoGène, F-69008 Lyon, France. 2 Department of Neurosciences, The Scripps Research Institute, La Jolla, CA 92037, USA. 3 Department of Neuroscience, Zuckerman Mind Brain Behavior Institute and Kavli Institute for Brain Science, Columbia University, New York, NY 10032, USA. Correspondence and requests for materials should be addressed to F.P. -
Table of Contents Neurology.Org/Ng Online ISSN: 2376-7839 Volume 3, Number 3, June 2017
Table of Contents Neurology.org/ng Online ISSN: 2376-7839 Volume 3, Number 3, June 2017 THE HELIX e151 HSP and deafness: Neurocristopathy caused by e157 Collaboration, workshops, and symposia a novel mosaic SOX10 mutation S.M. Pulst S. Donkervoort, D. Bharucha-Goebel, P. Yun, Y. Hu, P. Mohassel, A. Hoke, W.M. Zein, D. Ezzo, A.M. Atherton, A.C. Modrcin, M. Dasouki, A.R. Foley, and C.G. Bönnemann EDITORIAL e159 ARHGEF9 mutations cause a specific recognizable X-linked intellectual disability e155 Genetic analysis of age at onset variation in syndrome spinocerebellar ataxia type 2 P. Striano and F. Zara K.P. Figueroa, H. Coon, N. Santos, L. Velazquez, Companion article, e148 L.A. Mederos, and S.M. Pulst ARTICLES e158 Previously unrecognized behavioral phenotype in e148 ARHGEF9 disease: Phenotype clarification and Gaucher disease type 3 genotype-phenotype correlation M. Abdelwahab, M. Potegal, E.G. Shapiro, and M.Alber,V.M.Kalscheuer,E.Marco,E.Sherr, I. Nestrasil G. Lesca, M. Till, G. Gradek, A. Wiesener, C. Korenke, S. Mercier, F. Becker, T. Yamamoto, S.W. Scherer, C.R. Marshall, S. Walker, U.R. Dutta, A.B. Dalal, e160 Intramyocellular lipid excess in the mitochondrial V. Suckow, P. Jamali, K. Kahrizi, H. Najmabadi, and disorder MELAS: MRS determination at 7T B.A. Minassian S. Golla, J. Ren, C.R. Malloy, and J.M. Pascual Editorial, e159 e149 Clinicopathologic and molecular spectrum of CLINICAL/SCIENTIFIC NOTES RNASEH1-related mitochondrial disease e147 Camptocormia and shuffling gait due to a novel E. Bugiardini, O.V. Poole, A. Manole, A.M. Pittman, MT-TV mutation: Diagnostic pitfalls A. -
Cells, Tissues and Organs of the Immune System
Immune Cells and Organs Bonnie Hylander, Ph.D. Aug 29, 2014 Dept of Immunology [email protected] Immune system Purpose/function? • First line of defense= epithelial integrity= skin, mucosal surfaces • Defense against pathogens – Inside cells= kill the infected cell (Viruses) – Systemic= kill- Bacteria, Fungi, Parasites • Two phases of response – Handle the acute infection, keep it from spreading – Prevent future infections We didn’t know…. • What triggers innate immunity- • What mediates communication between innate and adaptive immunity- Bruce A. Beutler Jules A. Hoffmann Ralph M. Steinman Jules A. Hoffmann Bruce A. Beutler Ralph M. Steinman 1996 (fruit flies) 1998 (mice) 1973 Discovered receptor proteins that can Discovered dendritic recognize bacteria and other microorganisms cells “the conductors of as they enter the body, and activate the first the immune system”. line of defense in the immune system, known DC’s activate T-cells as innate immunity. The Immune System “Although the lymphoid system consists of various separate tissues and organs, it functions as a single entity. This is mainly because its principal cellular constituents, lymphocytes, are intrinsically mobile and continuously recirculate in large number between the blood and the lymph by way of the secondary lymphoid tissues… where antigens and antigen-presenting cells are selectively localized.” -Masayuki, Nat Rev Immuno. May 2004 Not all who wander are lost….. Tolkien Lord of the Rings …..some are searching Overview of the Immune System Immune System • Cells – Innate response- several cell types – Adaptive (specific) response- lymphocytes • Organs – Primary where lymphocytes develop/mature – Secondary where mature lymphocytes and antigen presenting cells interact to initiate a specific immune response • Circulatory system- blood • Lymphatic system- lymph Cells= Leukocytes= white blood cells Plasma- with anticoagulant Granulocytes Serum- after coagulation 1. -
Ataxia Telangiectasia: a Diagnostic Challenge. Case Report
case reports 2020; 6(2) https://doi.org/10.15446/cr.v6n2.83219 ATAXIA TELANGIECTASIA: A DIAGNOSTIC CHALLENGE. CASE REPORT Keywords: Ataxia Telangiectasia; Neurodegenerative Diseases; Cerebellar Ataxia; Spinocerebellar Degenerations; Telangiectasia. Palabras clave: Ataxia telangiectasia; Enfermedades neurodegenerativas; Ataxia cerebelosa; Degeneraciones espinocerebelosa; Telangiectasia. Natalia Martínez-Córdoba Universidad Militar Nueva Granada - Faculty of Medicine - Pediatric Neurology Research Group - Bogotá D.C. - Colombia. Hospital Militar Central - Pediatric Neurology Service - Bogotá D.C. - Colombia. Eugenia Espinosa-García Universidad Militar Nueva Granada - Faculty of Medicine - Pediatric Neurology Research Group - Bogotá D.C. - Colombia. Hospital Militar Central - Pediatric Neurology Service - Bogotá D.C. - Colombia. Universidad del Rosario - Medical School - Bogotá D.C. - Colombia. Corresponding author Natalia Martínez-Córdoba. Faculty of Medicine, Universidad Militar Nueva Granada. Bogotá D.C. Colombia. Email: [email protected]. Received: 28/10/2019 Accepted: 08/01/2020 case reports Vol. 6 No. 2: 109-17 110 RESUMEN ABSTRACT Introducción. La ataxia-telangiectasia (AT) es Introduction: Ataxia-telangiectasia (AT) is a un síndrome neurodegenerativo con baja inciden- neurodegenerative syndrome with low incidence cia y prevalencia mundial que es causado por una and prevalence worldwide, which is caused by a mutación del gen ATM, es de herencia autosó- mutation of the ATM gene. It is an autosomal re- mica recesiva y se asocia a mecanismos defec- cessive disorder that is associated with defective tuosos en la regeneración y reparación del ADN. cell regeneration and DNA repair mechanisms. It Este síndrome se caracteriza por la presencia de is characterized by progressive cerebellar atax- ataxia cerebelosa progresiva, movimientos ocula- ia, abnormal eye movements, oculocutaneous res anormales, telangiectasias oculocutáneas e telangiectasias and immunodeficiency. -
Practice Parameter for the Diagnosis and Management of Primary Immunodeficiency
Practice parameter Practice parameter for the diagnosis and management of primary immunodeficiency Francisco A. Bonilla, MD, PhD, David A. Khan, MD, Zuhair K. Ballas, MD, Javier Chinen, MD, PhD, Michael M. Frank, MD, Joyce T. Hsu, MD, Michael Keller, MD, Lisa J. Kobrynski, MD, Hirsh D. Komarow, MD, Bruce Mazer, MD, Robert P. Nelson, Jr, MD, Jordan S. Orange, MD, PhD, John M. Routes, MD, William T. Shearer, MD, PhD, Ricardo U. Sorensen, MD, James W. Verbsky, MD, PhD, David I. Bernstein, MD, Joann Blessing-Moore, MD, David Lang, MD, Richard A. Nicklas, MD, John Oppenheimer, MD, Jay M. Portnoy, MD, Christopher R. Randolph, MD, Diane Schuller, MD, Sheldon L. Spector, MD, Stephen Tilles, MD, Dana Wallace, MD Chief Editor: Francisco A. Bonilla, MD, PhD Co-Editor: David A. Khan, MD Members of the Joint Task Force on Practice Parameters: David I. Bernstein, MD, Joann Blessing-Moore, MD, David Khan, MD, David Lang, MD, Richard A. Nicklas, MD, John Oppenheimer, MD, Jay M. Portnoy, MD, Christopher R. Randolph, MD, Diane Schuller, MD, Sheldon L. Spector, MD, Stephen Tilles, MD, Dana Wallace, MD Primary Immunodeficiency Workgroup: Chairman: Francisco A. Bonilla, MD, PhD Members: Zuhair K. Ballas, MD, Javier Chinen, MD, PhD, Michael M. Frank, MD, Joyce T. Hsu, MD, Michael Keller, MD, Lisa J. Kobrynski, MD, Hirsh D. Komarow, MD, Bruce Mazer, MD, Robert P. Nelson, Jr, MD, Jordan S. Orange, MD, PhD, John M. Routes, MD, William T. Shearer, MD, PhD, Ricardo U. Sorensen, MD, James W. Verbsky, MD, PhD GlaxoSmithKline, Merck, and Aerocrine; has received payment for lectures from Genentech/ These parameters were developed by the Joint Task Force on Practice Parameters, representing Novartis, GlaxoSmithKline, and Merck; and has received research support from Genentech/ the American Academy of Allergy, Asthma & Immunology; the American College of Novartis and Merck. -
The Genetics and Clinical Manifestations of Telomere Biology Disorders Sharon A
REVIEW The genetics and clinical manifestations of telomere biology disorders Sharon A. Savage, MD1, and Alison A. Bertuch, MD, PhD2 3 Abstract: Telomere biology disorders are a complex set of illnesses meric sequence is lost with each round of DNA replication. defined by the presence of very short telomeres. Individuals with classic Consequently, telomeres shorten with aging. In peripheral dyskeratosis congenita have the most severe phenotype, characterized blood leukocytes, the cells most extensively studied, the rate 4 by the triad of nail dystrophy, abnormal skin pigmentation, and oral of attrition is greatest during the first year of life. Thereafter, leukoplakia. More significantly, these individuals are at very high risk telomeres shorten more gradually. When the extent of telo- of bone marrow failure, cancer, and pulmonary fibrosis. A mutation in meric DNA loss exceeds a critical threshold, a robust anti- one of six different telomere biology genes can be identified in 50–60% proliferative signal is triggered, leading to cellular senes- of these individuals. DKC1, TERC, TERT, NOP10, and NHP2 encode cence or apoptosis. Thus, telomere attrition is thought to 1 components of telomerase or a telomerase-associated factor and TINF2, contribute to aging phenotypes. 5 a telomeric protein. Progressively shorter telomeres are inherited from With the 1985 discovery of telomerase, the enzyme that ex- generation to generation in autosomal dominant dyskeratosis congenita, tends telomeric nucleotide repeats, there has been rapid progress resulting in disease anticipation. Up to 10% of individuals with apparently both in our understanding of basic telomere biology and the con- acquired aplastic anemia or idiopathic pulmonary fibrosis also have short nection of telomere biology to human disease. -
Current Perspectives on Primary Immunodeficiency Diseases
Clinical & Developmental Immunology, June–December 2006; 13(2–4): 223–259 Current perspectives on primary immunodeficiency diseases ARVIND KUMAR, SUZANNE S. TEUBER, & M. ERIC GERSHWIN Division of Rheumatology, Allergy and Clinical Immunology, Department of Internal Medicine, University of California at Davis School of Medicine, Davis, CA, USA Abstract Since the original description of X-linked agammaglobulinemia in 1952, the number of independent primary immunodeficiency diseases (PIDs) has expanded to more than 100 entities. By definition, a PID is a genetically determined disorder resulting in enhanced susceptibility to infectious disease. Despite the heritable nature of these diseases, some PIDs are clinically manifested only after prerequisite environmental exposures but they often have associated malignant, allergic, or autoimmune manifestations. PIDs must be distinguished from secondary or acquired immunodeficiencies, which are far more common. In this review, we will place these immunodeficiencies in the context of both clinical and laboratory presentations as well as highlight the known genetic basis. Keywords: Primary immunodeficiency disease, primary immunodeficiency, immunodeficiencies, autoimmune Introduction into a uniform nomenclature (Chapel et al. 2003). The International Union of Immunological Societies Acquired immunodeficiencies may be due to malnu- (IUIS) has subsequently convened an international trition, immunosuppressive or radiation therapies, infections (human immunodeficiency virus, severe committee of experts every two to three years to revise sepsis), malignancies, metabolic disease (diabetes this classification based on new PIDs and further mellitus, uremia, liver disease), loss of leukocytes or understanding of the molecular basis. A recent IUIS immunoglobulins (Igs) via the gastrointestinal tract, committee met in 2003 in Sintra, Portugal with its kidneys, or burned skin, collagen vascular disease such findings published in 2004 in the Journal of Allergy and as systemic lupus erythematosis, splenectomy, and Clinical Immunology (Chapel et al.