Tool Use by Four Species of Indo-Pacific Sea Urchins
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Echinoidea Clypeasteroidea
Biodiversity Journal, 2014, 5 (2): 291–358 Analysis of some astriclypeids (Echinoidea Clypeast- eroida) Paolo Stara1* & Luigi Sanciu2 1Centro Studi di Storia Naturale del Mediterraneo - Museo di Storia Naturale Aquilegia, Via Italia 63, Pirri-Cagliari and Geomuseo Monte Arci, Masullas, Oristano, Sardinia, Italy; e-mail: [email protected] *Corresponding author The systematic position of some astriclypeid species assigned through times to the genera Amphiope L. Agassiz, 1840 and Echinodiscus Leske, 1778 is reviewed based on the plating ABSTRACT pattern characteristics of these two genera universally accepted, and on the results of new studies. A partial re-arrangement of the family Astriclypeidae Stefanini, 1912 is herein pro- posed, with the institution of Sculpsitechinus n. g. and Paraamphiope n. g., both of them char- acterized by a peculiar plating-structure of the interambulacrum 5 and of the ambulacra I and V. Some species previously attributed to Amphiope and Echinodiscus are transferred into these two new genera. Two new species of Astriclypeidae are established: Echinodiscus andamanensis n. sp. and Paraamphiope raimondii n. sp. Neotypes are proposed for Echin- odiscus tenuissimus L. Agassiz, 1840 and E. auritus Leske, 1778, since these species were still poorly defined, due to the loss of the holotypes and, for E. auritus, also to the unclear geographical/stratigraphical information about the type-locality. A number of additional nom- inal fossil and extant species of "Echinodiscus" needs revision based on the same method. KEY WORDS Astriclypeidae; Amphiope; Paraamphiope; Echinodiscus; Sculpsitechinus; Oligo-Miocene. Received 28.02.2014; accepted 14.03.2014; printed 30.06.2014 Paolo Stara (ed.). Studies on some astriclypeids (Echinoidea Clypeasteroida), pp. -
Taxonomía Y Biogeografía Ecológica De Los Equinoideos Irregulares (Echinoidea: Irregularia) De México
Taxonomía y biogeografía ecológica de los equinoideos irregulares (Echinoidea: Irregularia) de México Alejandra Martínez-Melo1, 2, Francisco Alonso Solís-Marín2, Blanca Estela Buitrón-Sánchez3 & Alfredo Laguarda-Figueras2 1. Posgrado de Ciencias del Mar y Limnología (PCML), Universidad Nacional Autónoma de México (UNAM). México, D. F. 04510, México; [email protected] 2. Laboratorio de Sistemática y Ecología de Equinodermos, Instituto de Ciencias del Mar y Limnología (ICML), UNAM. Apdo. Post. 70-305, México, D. F. 04510, México; [email protected] 3. Departamento de Paleontología, Instituto de Geología (IG), UNAM, Cd. Universitaria, Delegación Coyoacán, México, D. F. 04510, México; [email protected] Recibido 04-VI-2014. Corregido 09-X-2014. Aceptado 04-XI-2014. Abstract: Taxonomy and ecologic biogeography of the irregular Echinoids (Echinoidea: Irregularia) from Mexico. Mexico owns 643 species of echinoderms, almost 10% of the known echinoderm species in the planet. Its geographic location -between the oceanic influences of the Western Central Atlantic and the Eastern Central Pacific- largely explains its enormous biological and ecological diversity. Research on echinoderms in Mexico began in the late nineteenth century; however, there are no reviews on its irregular echinoids. This work reviews the taxonomic and geographic information of irregular echinoids from Mexico, housed in four collections: 1) Colección Nacional de Equinodermos “Ma. Elena Caso Muñoz” from the Instituto de Ciencias del Mar y Limnología (ICML), Universidad Nacional Autónoma de México (UNAM); 2) Invertebrate Zoology Collection, Smithsonian Museum of Natural History, Washington, D.C., United States of America (USA); 3) Invertebrate Collection, Museum of Comparative Zoology, University of Harvard, Boston, Massachusetts, USA and 4) Invertebrate Zoology, Peabody Museum, Yale University, New Haven, Connecticut, USA. -
Final Thesis File (7.170Mb)
A TAXONOMIC REVISION OF THE TERTIARY ECHINOID GENUS MONOSTYCHIA Tony Sadler ORCID: 0000-0002-3406-8885 Submitted for the total fulfilment of the requirements of the degree of Doctor of Philosophy July 2020 School of Earth Sciences The University of Melbourne ABSTRACT For over 100 years the genus Monostychia (Echinoidea: Clypeasteroida) and its type species M. australis Laube, 1869 have been a taxonomic home for a wide range of genera and species with the commonality of a rounded to pentagonal, discoidal test and a submarginal periproct. The specimens comprising this group are all extinct and from the Tertiary strata of southern Australia. While there have been a few minor species identified beyond M. australis, notably M. etheridgei Woods, 1877 and P. loveni (Duncan, 1877), it has been clear to many researchers that the variability remaining in M. australis was representative of numerous other taxa awaiting discovery. Recent taxonomic works on the Clypeasteroida suggested that the number of interambulacral plates on the oral surface of the test of some species was a useful diagnostic character. Of interest were the plates that first come into contact with the periproct. However, there appeared little evidence in the literature that it had been established that the number of such plates remained constant with test length and age, or that the variability in each taxon, of those plate numbers, has been determined. Without understanding those two issues the utility of plate numbers was questionable. This study set out to resolve some of those issues for Monostychia and its relatives. It was found that the number of interambulacral and ambulacral plates on the oral surface was fixed and did not change with increasing test length and therefore there was potential utility for plate numbers as a taxonomic tool. -
Diets and Coexistence of the Sea Urchins Lytechinus Variegatus and Arbacia Punctulata (Echinodermata) Along the Central Florida Gulf Coast
MARINE ECOLOGY PROGRESS SERIES Vol. 295: 171–182, 2005 Published June 23 Mar Ecol Prog Ser Diets and coexistence of the sea urchins Lytechinus variegatus and Arbacia punctulata (Echinodermata) along the central Florida gulf coast Janessa Cobb, John M. Lawrence* Department of Biology, University of South Florida, Tampa, Florida 33620, USA ABSTRACT: The basis for coexistence of similar species is fundamental in community ecology. One mechanism for coexistence is differentiation of diets. Lytechinus variegatus and Arbacia punctulata coexist in different microhabitats along the Florida gulf coast. Their great difference in morphology might affect their choice of microhabitats and diet. We analyzed diets of both species at 1 offshore and 1 nearshore site where both occurred in relatively equal numbers, an offshore site dominated by A. punctulata and an offshore site dominated by L. variegatus. Gut contents were analyzed to deter- mine the diet. A. punctulata prim. consumed sessile invertebrates except on dates when algal avail- ability was higher than normal. L. variegatus primarily consumed macroflora except on dates when macroflora was extremely limited. Electivity indices revealed no strong preferences for particular species of algae, although L. variegatus consumed many drift species. A. punctulata and L. variega- tus both fed in a random manner, although they avoided particular species of algae known to contain high concentrations of secondary metabolites. The diet of A. punctulata was correlated with algae only over rubble outcroppings at the offshore site with the highest biomass. Diets of offshore popula- tions were more similar to each other, regardless of the presence of conspecifics, than to those of populations at Caspersen Beach (nearshore site). -
Effects of Ocean Warming and Acidification on Fertilization Success and Early Larval Development in the Green Sea Urchin, Lytechinus Variegatus Brittney L
Nova Southeastern University NSUWorks HCNSO Student Theses and Dissertations HCNSO Student Work 12-1-2017 Effects of Ocean Warming and Acidification on Fertilization Success and Early Larval Development in the Green Sea Urchin, Lytechinus variegatus Brittney L. Lenz Nova Southeastern University, [email protected] Follow this and additional works at: https://nsuworks.nova.edu/occ_stuetd Part of the Marine Biology Commons, and the Oceanography and Atmospheric Sciences and Meteorology Commons Share Feedback About This Item NSUWorks Citation Brittney L. Lenz. 2017. Effects of Ocean Warming and Acidification on Fertilization Success and Early Larval Development in the Green Sea Urchin, Lytechinus variegatus. Master's thesis. Nova Southeastern University. Retrieved from NSUWorks, . (457) https://nsuworks.nova.edu/occ_stuetd/457. This Thesis is brought to you by the HCNSO Student Work at NSUWorks. It has been accepted for inclusion in HCNSO Student Theses and Dissertations by an authorized administrator of NSUWorks. For more information, please contact [email protected]. Thesis of Brittney L. Lenz Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science M.S. Marine Biology Nova Southeastern University Halmos College of Natural Sciences and Oceanography December 2017 Approved: Thesis Committee Major Professor: Joana Figueiredo Committee Member: Nicole Fogarty Committee Member: Charles Messing This thesis is available at NSUWorks: https://nsuworks.nova.edu/occ_stuetd/457 HALMOS COLLEGE OF NATURAL SCIENCES AND -
Marc Slattery University of Mississippi Department of Pharmacognosy School of Pharmacy Oxford, MS 38677-1848 (662) 915-1053 [email protected]
Marc Slattery University of Mississippi Department of Pharmacognosy School of Pharmacy Oxford, MS 38677-1848 (662) 915-1053 [email protected] EDUCATION: Ph.D. Biological Sciences. University of Alabama at Birmingham (1994); Doctoral Dissertation: A comparative study of population structure and chemical defenses in the soft corals Alcyonium paessleri May, Clavularia frankliniana Roule, and Gersemia antarctica Kukenthal in McMurdo Sound, Antarctica. M.A. Marine Biology. San Jose State University at the Moss Landing Marine Laboratories (1987); Masters Thesis: Settlement and metamorphosis of red abalone (Haliotis rufescens) larvae: A critical examination of mucus, diatoms, and γ-aminobutyric acid (GABA) as inductive substrates. B.S. Biology. Loyola Marymount University (1981); Senior Thesis: The ecology of sympatric species of octopuses (Octopus fitchi and O. diguetti) at Coloraditos, Baja Ca. RESEARCH INTERESTS: Chemical defenses/natural products chemistry of marine & freshwater invertebrates, and microbes. Evolutionary ecology, and ecophysiological adaptations of organisms in aquatic communities; including coral reef, cave, sea grass, kelp forest, and polar ecosystems. Chemical signals in reproductive biology and larval ecology/recruitment, and their applications to aquaculture and biomedical sciences. Cnidarian, Sponge, Molluscan, and Echinoderm biology/ecology, population structure, symbioses and photobiological adaptations. Marine microbe competition and culture. Environmental toxicology. EMPLOYMENT: Professor of Pharmacognosy and -
Coastal and Marine Ecological Classification Standard (2012)
FGDC-STD-018-2012 Coastal and Marine Ecological Classification Standard Marine and Coastal Spatial Data Subcommittee Federal Geographic Data Committee June, 2012 Federal Geographic Data Committee FGDC-STD-018-2012 Coastal and Marine Ecological Classification Standard, June 2012 ______________________________________________________________________________________ CONTENTS PAGE 1. Introduction ..................................................................................................................... 1 1.1 Objectives ................................................................................................................ 1 1.2 Need ......................................................................................................................... 2 1.3 Scope ........................................................................................................................ 2 1.4 Application ............................................................................................................... 3 1.5 Relationship to Previous FGDC Standards .............................................................. 4 1.6 Development Procedures ......................................................................................... 5 1.7 Guiding Principles ................................................................................................... 7 1.7.1 Build a Scientifically Sound Ecological Classification .................................... 7 1.7.2 Meet the Needs of a Wide Range of Users ...................................................... -
X-Ray Microct Study of Pyramids of the Sea Urchin Lytechinus Variegatus
Journal of Structural Biology Journal of Structural Biology 141 (2003) 9–21 www.elsevier.com/locate/yjsbi X-ray microCT study of pyramids of the sea urchin Lytechinus variegatus S.R. Stock,a,* S. Nagaraja,b J. Barss,c T. Dahl,c and A. Veisc a Institute for Bioengineering and Nanoscience in Advanced Medicine, Northwestern University, 303 E. Chicago Avenue, Tarry 16-717, Chicago, IL 60611-3008, USA b School of Mechanical Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA c Department of Cell and Molecular Biology, Northwestern University, Chicago, IL 60611, USA Received 19 June 2002, and in revised form 23 September 2002 Abstract This paper reports results of a novel approach, X-ray microCT, for quantifying stereom structures applied to ossicles of the sea urchin Lytechinus variegatus. MicroCT, a high resolution variant of medical CT (computed tomography), allows noninvasive mapping of microstructure in 3-D with spatial resolution approaching that of optical microscopy. An intact pyramid (two demi- pyramids, tooth epiphyses, and one tooth) was reconstructed with 17 lm isotropic voxels (volume elements); two individual demipyramids and a pair of epiphyses were studied with 9–13 lm isotropic voxels. The cross-sectional maps of a linear attenuation coefficient produced by the reconstruction algorithm showed that the structure of the ossicles was quite heterogeneous on the scale of tens to hundreds of micrometers. Variations in magnesium content and in minor elemental constitutents could not account for the observed heterogeneities. Spatial resolution was insufficient to resolve the individual elements of the stereom, but the observed values of the linear attenuation coefficient (for the 26 keV effective X-ray energy, a maximum of 7.4 cmÀ1 and a minimum of 2cmÀ1 away from obvious voids) could be interpreted in terms of fractions of voxels occupied by mineral (high magnesium calcite). -
Singapore Biodiversity Records Xxxx
SINGAPORE BIODIVERSITY RECORDS 2017: 96 ISSN 2345-7597 Date of publication: 28 July 2017. © National University of Singapore Zebra crab on a sea-urchin at Changi Beach Subjects: Zebra crab, Zebrida adamsii (Crustacea: Decapoda: Brachyura: Eumedonidae); Sea-urchin, Salmacis sphaeroides (Echinoidea: Camarodonta: Temnopleuridae). Subjects identified by: Neo Mei Lin. Location, date and time: Singapore Island, Changi Beach; 25 June 2017; around 0600 hrs. Habitat: Estuarine. Intertidal seagrass meadow. Observers: Contributors. Observation: A single zebra crab with carapace width of about 10 mm was found on the surface of a sea- urchin, Salmacis sphaeroides (Fig. A & B). Remarks: Members of the eumedonid crabs are known obligates on sea-urchins. Zebrida adamsii is widely distributed throughout the Indo-West Pacific (Ng & Chia, 1999), and has been documented on one occasion in Singapore (Johnson, 1962). This is believed to be the first record of the species on Changi Beach. The host sea urchin was found with a naked inter-ambulacral zone (as indicated by the white arrow in Fig. A), which could be due to Z. adamsii feeding on the urchin’s tube-feet and tissues (Saravanan et al., 2015). This suggests that the crab is parasitic on the sea urchin. References: Johnson, D. S., 1962. Commensalism and semi-parasitism amongst decapod Crustacea in Singapore waters. Proceedings of the First Regional Symposium, Scientific Knowledge Tropical Parasites, Singapore. University of Singapore. pp. 282–288. Ng, P. K. L. & D. G. B. Chia, 1999. Revision of the genus Zebrida White, 1847 (Crustacea: Decapoda: Brachyura: Eumedonidae). Bulletin of Marine Science. 65: 481–495. Saravanan, R., N. -
DNA Variation and Symbiotic Associations in Phenotypically Diverse Sea Urchin Strongylocentrotus Intermedius
DNA variation and symbiotic associations in phenotypically diverse sea urchin Strongylocentrotus intermedius Evgeniy S. Balakirev*†‡, Vladimir A. Pavlyuchkov§, and Francisco J. Ayala*‡ *Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697-2525; †Institute of Marine Biology, Vladivostok 690041, Russia; and §Pacific Research Fisheries Centre (TINRO-Centre), Vladivostok, 690600 Russia Contributed by Francisco J. Ayala, August 20, 2008 (sent for review May 9, 2008) Strongylocentrotus intermedius (A. Agassiz, 1863) is an economically spines of the U form are relatively short; the length, as a rule, does important sea urchin inhabiting the northwest Pacific region of Asia. not exceed one third of the radius of the testa. The spines of the G The northern Primorye (Sea of Japan) populations of S. intermedius form are longer, reaching and frequently exceeding two thirds of the consist of two sympatric morphological forms, ‘‘usual’’ (U) and ‘‘gray’’ testa radius. The testa is significantly thicker in the U form than in (G). The two forms are significantly different in morphology and the G form. The morphological differences between the U and G preferred bathymetric distribution, the G form prevailing in deeper- forms of S. intermedius are stable and easily recognizable (Fig. 1), water settlements. We have analyzed the genetic composition of the and they are systematically reported for the northern Primorye S. intermedius forms using the nucleotide sequences of the mitochon- coast region (V.A.P., unpublished data). drial gene encoding the cytochrome c oxidase subunit I and the Little is known about the population genetics of S. intermedius; nuclear gene encoding bindin to evaluate the possibility of cryptic the available data are limited to allozyme polymorphisms (4–6). -
SI Appendix for Hopkins, Melanie J, and Smith, Andrew B
Hopkins and Smith, SI Appendix SI Appendix for Hopkins, Melanie J, and Smith, Andrew B. Dynamic evolutionary change in post-Paleozoic echinoids and the importance of scale when interpreting changes in rates of evolution. Corrections to character matrix Before running any analyses, we corrected a few errors in the published character matrix of Kroh and Smith (1). Specifically, we removed the three duplicate records of Oligopygus, Haimea, and Conoclypus, and removed characters C51 and C59, which had been excluded from the phylogenetic analysis but mistakenly remain in the matrix that was published in Appendix 2 of (1). We also excluded Anisocidaris, Paurocidaris, Pseudocidaris, Glyphopneustes, Enichaster, and Tiarechinus from the character matrix because these taxa were excluded from the strict consensus tree (1). This left 164 taxa and 303 characters for calculations of rates of evolution and for the principal coordinates analysis. Other tree scaling methods The most basic method for scaling a tree using first appearances of taxa is to make each internal node the age of its oldest descendent ("stand") (2), but this often results in many zero-length branches which are both theoretically questionable and in some cases methodologically problematic (3). Several methods exist for modifying zero-length branches. In the case of the results shown in Figure 1, we assigned a positive length to each zero-length branch by having it share time equally with a preceding, non-zero-length branch (“equal”) (4). However, we compared the results from this method of scaling to several other methods. First, we compared this with rates estimated from trees scaled such that zero-length branches share time proportionally to the amount of character change along the branches (“prop”) (5), a variation which gave almost identical results as the method used for the “equal” method (Fig. -
The Gut Microbiome of the Sea Urchin, Lytechinus Variegatus, from Its Natural Habitat Demonstrates Selective Attributes of Micro
FEMS Microbiology Ecology, 92, 2016, fiw146 doi: 10.1093/femsec/fiw146 Advance Access Publication Date: 1 July 2016 Research Article RESEARCH ARTICLE The gut microbiome of the sea urchin, Lytechinus variegatus, from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic profiles Joseph A. Hakim1,†, Hyunmin Koo1,†, Ranjit Kumar2, Elliot J. Lefkowitz2,3, Casey D. Morrow4, Mickie L. Powell1, Stephen A. Watts1,∗ and Asim K. Bej1,∗ 1Department of Biology, University of Alabama at Birmingham, 1300 University Blvd, Birmingham, AL 35294, USA, 2Center for Clinical and Translational Sciences, University of Alabama at Birmingham, Birmingham, AL 35294, USA, 3Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, USA and 4Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, 1918 University Blvd., Birmingham, AL 35294, USA ∗Corresponding authors: Department of Biology, University of Alabama at Birmingham, 1300 University Blvd, CH464, Birmingham, AL 35294-1170, USA. Tel: +1-(205)-934-8308; Fax: +1-(205)-975-6097; E-mail: [email protected]; [email protected] †These authors contributed equally to this work. One sentence summary: This study describes the distribution of microbiota, and their predicted functional attributes, in the gut ecosystem of sea urchin, Lytechinus variegatus, from its natural habitat of Gulf of Mexico. Editor: Julian Marchesi ABSTRACT In this paper, we describe the microbial composition and their predictive metabolic profile in the sea urchin Lytechinus variegatus gut ecosystem along with samples from its habitat by using NextGen amplicon sequencing and downstream bioinformatics analyses. The microbial communities of the gut tissue revealed a near-exclusive abundance of Campylobacteraceae, whereas the pharynx tissue consisted of Tenericutes, followed by Gamma-, Alpha- and Epsilonproteobacteria at approximately equal capacities.