EVOLUTION in SPACE and TIME Cladogenesis

Total Page:16

File Type:pdf, Size:1020Kb

EVOLUTION in SPACE and TIME Cladogenesis species X anagenesis BIOL2007 species Y EVOLUTION IN SPACE AND TIME cladogenesis Kanchon Dasmahapatra species Z Time Phylogeny with anagenesis and cladogenesis anagenesis : evolution within lineages microevolution vs. vs. cladogenesis : splitting of lineages, speciation macroevolution Genetic divergence of populations Genetic divergence of populations GEOGRAPHIC LOCAL: sympatric divergence allopatric divergence e.g. island populations e.g. Rhagoletis hostraces parapatric divergence Note: Distributions may change! Current distribution ≠ original distribution 1 species X anagenesis Spatial differences in gene frequencies may represent speciation in progress Parapatric distributions and hybrid zones or contact zones species Y within species: a first step in speciation? rate of Many intermediates between slight genetic differentiation cladogenesis hybridisation and separate species occur in parapatry The remainder of the lecture will concern parapatric species Z distributions Time Phylogeny with anagenesis and cladogenesis Genetic variation across a geographic area Measuring dispersal A consistent change in gene frequency heritable phenotype, If dispersal between across a geographical range is known as a cline birthplace and breeding site is Clines occur because dispersal across a region is limited. random. Dispersal by individuals leads to gene flow Same distribution as passive diffusion: a two-dimensional normal distribution . Standard deviation, σσσ, of the dispersal distribution is the most useful measure of dispersal . A population "neighbourhood" : group of individuals who come from an area 2σ wide 2 1 A Dispersal rate, σ Causes of clines: selection/migration balance 0 .6 0.5 0 .5 extrinsic or environment selection 0 .4 0 .3 Gene frequency Gene σ = 0 0 .2 0 .1 0 a 0 -10 -5 0 5 10 -10 -5 0 5 10 1 A 0.5 0 .0 7 0 .0 6 0 .0 5 0 .0 4 Gene frequency Gene 0 .0 3 0 .0 2 Width of a cline a 0 .0 1 0 0 -10 -5 0 5 10 -10 -5 0 5 10 is proportional 1 A to dispersal 0.5 0 .0 3 5 divided by 0 .0 3 0 .0 2 5 selection/migration balance 0 .0 2 Gene frequency Gene 0 .0 1 5 √(selection): 0 .0 1 a 0 .0 0 5 0 0 -10 -5 0 5 10 -10 -5 0 5 10 1 σ A w=1.7 s 0.5 0 .0 0 4 5 0 .0 0 4 0 .0 0 3 5 0 .0 0 3 extrinsic or environment selection 0 .0 0 2 5 0 .0 0 2 Genefrequency 0 .0 0 1 5 σ = infintity 0 .0 0 1 a 0 .0 0 0 5 0 0 -10 -5 0 5 10 -10 -5 0 5 10 Distance Distance environment A environment a Causes of clines: Cline in peppered moth melanism Cline in sickle cell anaemia selection for carbonaria selection against carbonaria selection against typica selection for typica 3 Heterozygote disadvantage can cause clines European shrew chromosome races Two stable situations: fixed for A OR fixed for a Oxford race Different populations fixed for either A or a Hermitage Oxford Ancestral Hermitage fertile unviable fertile Cline where populations mix. Dispersal balanced by Oxford fertile fertile Ancestral fertile selection against heterozygotes. Hermitage race Under heterozygous disadvantage, 100% σ 75% w=2.83 , ... where s' is average selection s' against homozygotes. Hermitage homo 50% hybrid genotypes Frequency ancestral homo 25% stronger selection, s ⇒ narrower cline; Oxford homo 0% greater dispersal distance, σ ⇒ broader cline. 239 230 224 217 212 205 199 197 190 185 180 175 174 168 166 157 146 Distance / km Causes of clines: selection/migration balance Causes of clines: selection/migration balance Intrinsic selection Intrinsic selection FREQUENCY-DEPENDENT SELECTION Moving clines Intrinsic selection does not depend on the outside environment. ⇒ No tendency for a cline to remain stationary. If s ≠ t, cline will move. e.g. warning colour: rare forms nonadaptive because predators learn commoner colour pattern. Intrinsic selection again 4 Heliconius erato hybrid zone Causes of clines: drift/migration balance 1.0 0.8 allele 2001 yb 0.6 40 km 0.4 1982 Random drift : no consistent directional changes 0.2 Frequency of of Frequency However, locally, drift may result in a temporary 0.0 monotonic change. -100 0 100 200 300 Distance (km E of Panama City) MJ Blum 2002. Evolution 56, 1992-1998 Causes of clines: drift/migration balance Hybrid zones time Narrow zones of contact between divergent forms or even species. “Multiple narrow clines” Within hybrid zones : few hybrids or many hybrids themselves may consist only of F1 only, or of F1, F2 and every kind of backcross. Many species and/or races are distributed in parapatry, and have narrow hybrid zones between them. STAGE II of Sewall Wright’s SHIFTING BALANCE THEORY 5 Anartia fatima amathea hybrid zone Tarapoto mutliple hybrid zones N A. fatima A. amathea Tarapoto Over 20 species of Ithomiine and Heliconius butterflies show clear subspecies differences 75 km Dasmahapatra et al. 2002 Evolution The fire-bellied/yellow-bellied toads (Bombina) Meet in a narrow east-west hybrid zone stretching over a large part of eastern Europe. Bombinabombina Bombinavariegata 6 The Bombina hybrid zone Hybrid zones, then, are places where narrow clines at multiple Clines at a few major loci loci occur together. No differences in allozymes, chromosomes etc. Hybrids viable and fertile. Narrow clines due to strong selection. Hybrid zones, cline theory and speciation Conclusions Hybridising forms/species indicate speciation in progress Species differ genetically at multiple loci. Reproductive isolation incomplete. To understand their speciation, we need to know about Study genes leading to speciation. species X divergence that took place in the past. Yet for most genetic studies, we only have the present; a thin film on the surface of time. species Y Spatially separated populations may be “incipient species”. rate of hybridisation species Z Time 7 Spatial evolution and cline theory: Spatial evolution and cline theory: understanding “extrinsic” or environmental adaptation “intrinsic” selection Migration can swamp local adaptation. Intrinsic selected genes (heterozygous disadvantage, frequencydependent selection) will also evolve spatially to But wherever the cline width, w, is substantially smaller than form clines. environmental patch width, adaptation can occur in parapatry, in spite of gene flow. These clines can move. Differently selected forms can evolve in parapatry. Hybrid zones: regions where multiple narrow clines occur. Can be used to understand gene flow and selection. Reading http://www.ucl.ac.uk/taxome/kanchon/biol2007/lectures/kanchon /Hz/Hz.html FUTUYMA, DJ 2005. Evolution. Ch 6, Ch 9: 3269 FUTUYMA, DJ 1998. Evolutionary Biology. Geographic variation and clines: chapter 9 (pp. 257262). Cline theory: chapter 13 (pp. 381383). Speciation and natural selection in Hybrid zones: chapter 15 (pp. 454456, 464468). anciently asexual bdelloid rotifers Dr Tim Barraclough (Imperial College, London) 5 pm Wednesday, 25th February 2009 Medical Sciences AV Hill Lecture Theatre, UCL 8.
Recommended publications
  • Kinetic Effects of Temperature on Rates of Genetic Divergence and Speciation Andrew P
    Kinetic effects of temperature on rates of genetic divergence and speciation Andrew P. Allen*†, James F. Gillooly‡, Van M. Savage§, and James H. Brown†¶ *National Center for Ecological Analysis and Synthesis, 735 State Street, Suite 300, Santa Barbara, CA 93101; ‡Department of Zoology, University of Florida, Gainesville, FL 32611; §Bauer Center for Genomics Research, Harvard University, Boston, MA 02138; and ¶Department of Biology, University of New Mexico, Albuquerque, NM 87131 Contributed by James H. Brown, May 2, 2006 Latitudinal gradients of biodiversity and macroevolutionary dy- dependence of mass-specific metabolic rate, B៮ (J⅐secϪ1⅐gϪ1) namics are prominent yet poorly understood. We derive a model (12–14): that quantifies the role of kinetic energy in generating biodiver- Ϫ1/4 ϪE/kT ϪE/kT sity. The model predicts that rates of genetic divergence and B៮ ϭ B͞M ϭ boM e ϭ Boe , [1] speciation are both governed by metabolic rate and therefore Ϫ1 show the same exponential temperature dependence (activation where B is individual metabolic rate (J sec ), M is body mass (g), ؋ 10؊19 J). Predictions are T is absolute temperature (K), Bo is a normalization parameter 1.602 ؍ energy of Ϸ0.65 eV; 1 eV Ϫ1 Ϫ1 supported by global datasets from planktonic foraminifera for independent of temperature (J⅐sec ⅐g ) that varies with body Ϫ1/4 rates of DNA evolution and speciation spanning 30 million years. size as Bo ϭ boM (12), and bo is a normalization parameter As predicted by the model, rates of speciation increase toward the independent of body size and temperature that varies among tropics even after controlling for the greater ocean coverage at taxonomic and functional groups (12, 17).
    [Show full text]
  • Evolutionary Trends
    Evo Edu Outreach (2008) 1:259–273 DOI 10.1007/s12052-008-0055-6 ORIGINAL SCIENTIFIC ARTICLE Evolutionary Trends T. Ryan Gregory Published online: 25 June 2008 # Springer Science + Business Media, LLC 2008 Abstract The occurrence, generality, and causes of large- a pattern alone, to extrapolate from individual cases to scale evolutionary trends—directional changes over long entire systems, and to focus on extremes rather than periods of time—have been the subject of intensive study recognizing diversity. This is especially true in the study and debate in evolutionary science. Large-scale patterns in the of historically contingent processes such as evolution, history of life have also been of considerable interest to which spans nearly four billion years and encompasses nonspecialists, although misinterpretations and misunder- the rise and disappearance of hundreds of millions, if not standings of this important issue are common and can have billions, of species and the struggles of an unimaginably significant implications for an overall understanding of large number of individual organisms. evolution. This paper provides an overview of how trends This is not to say that no patterns exist in the history of are identified, categorized, and explained in evolutionary life, only that the situation is often far more complex than is biology. Rather than reviewing any particular trend in detail, acknowledged. Notably, the most common portrayals of the intent is to provide a framework for understanding large- evolution in nonacademic settings include not just change, scale evolutionary patterns in general and to highlight the fact but directional, adaptive change—if not outright notions of that both the patterns and their underlying causes are usually “advancement”—and it is fair to say that such a view has in quite complex.
    [Show full text]
  • Lineages, Splits and Divergence Challenge Whether the Terms Anagenesis and Cladogenesis Are Necessary
    Biological Journal of the Linnean Society, 2015, , – . With 2 figures. Lineages, splits and divergence challenge whether the terms anagenesis and cladogenesis are necessary FELIX VAUX*, STEVEN A. TREWICK and MARY MORGAN-RICHARDS Ecology Group, Institute of Agriculture and Environment, Massey University, Palmerston North, New Zealand Received 3 June 2015; revised 22 July 2015; accepted for publication 22 July 2015 Using the framework of evolutionary lineages to separate the process of evolution and classification of species, we observe that ‘anagenesis’ and ‘cladogenesis’ are unnecessary terms. The terms have changed significantly in meaning over time, and current usage is inconsistent and vague across many different disciplines. The most popular definition of cladogenesis is the splitting of evolutionary lineages (cessation of gene flow), whereas anagenesis is evolutionary change between splits. Cladogenesis (and lineage-splitting) is also regularly made synonymous with speciation. This definition is misleading as lineage-splitting is prolific during evolution and because palaeontological studies provide no direct estimate of gene flow. The terms also fail to incorporate speciation without being arbitrary or relative, and the focus upon lineage-splitting ignores the importance of divergence, hybridization, extinction and informative value (i.e. what is helpful to describe as a taxon) for species classification. We conclude and demonstrate that evolution and species diversity can be considered with greater clarity using simpler, more transparent terms than anagenesis and cladogenesis. Describing evolution and taxonomic classification can be straightforward, and there is no need to ‘make words mean so many different things’. © 2015 The Linnean Society of London, Biological Journal of the Linnean Society, 2015, 00, 000–000.
    [Show full text]
  • The Cambrian and Beyond A. Types of Fossils 1. Compression
    The Cambrian and Beyond A. Types of Fossils 1. Compression & Impression fossils 2. Permineralized fossils 3. Casts & Molds 4. Unaltered remains – mummy B. Sorting out the Fossil Record: Strengths & Weaknesses 1. Lowland and shallow marine bias 2. Hard part bias 3. Age bias 4. Goal is to recognize the constraints and still be creative C. Cambrian Explosion Revisited – The Metazoan Body Plan 1. All animal phyla appeared in ~40 million years! 2. Symmetry – Diploblasts and Triplotblasts (Radial and Bilateral) a. Ecto/Endo vs Ecto/Endo/Mesoderm 3. Coelom or fluid filled cavity via mesoderm lined peritoneum a. Coelomates, pseudocoelomates, acoelomates 4. Protostomes (Ecdysozoans & Lophotrochozoans) and deuterostomes a. both have bilateral symmetry, true coeloms, 3 tissue types b. spiral cleavage vs. radial cleavage c. gastrulation – first the mouth or second the mouth 5. Notochords.... D. Ediacaran & Burgess Shale Faunas 1. Ediacaran – Soft bodies forms, many trace type fossils 2. Burgess Shale – Wide variety of body plans evolved, only a subset remained, fewer yet exist today. Lecture 12.1 E. Phylogeny of Metazoans: New Ways to Make a Living 1. Environmental forcing functions, e.g., Oxygen Story 2. Genetic forcing functions, e.g., HOM/Hox genes F. Macroevolutionary Patterns: Evolution’s Greatest Hits! 1. Adaptive radiations correlated with adaptive innovations giving rise to a number of descendant species that occupy a large range of niches. a. Lacking competitors over superior adaptations 2. Major Examples: ! Cambrian Explosion for animals ! Twice with land plants, Silurian/Devonian and Cretaceous G. Punctuated Equilibrium 1. Darwin: aware of the problem, but wrote off as patchy record due to incompleteness of the fossil record.
    [Show full text]
  • •How Does Microevolution Add up to Macroevolution? •What Are Species
    Microevolution and Macroevolution • How does Microevolution add up to macroevolution? • What are species? • How are species created? • What are anagenesis and cladogenesis? 1 Sunday, March 6, 2011 Species Concepts • Biological species concept: Defines species as interbreeding populations reproductively isolated from other such populations. • Evolutionary species concept: Defines species as evolutionary lineages with their own unique identity. • Ecological species concept: Defines species based on the uniqueness of their ecological niche. • Recognition species concept: Defines species based on unique traits or behaviors that allow members of one species to identify each other for mating. 2 Sunday, March 6, 2011 Reproductive Isolating Mechanisms • Premating RIMs Habitat isolation Temporal isolation Behavioral isolation Mechanical incompatibility • Postmating RIMs Sperm-egg incompatibility Zygote inviability Embryonic or fetal inviability 3 Sunday, March 6, 2011 Modes of Evolutionary Change 4 Sunday, March 6, 2011 Cladogenesis 5 Sunday, March 6, 2011 6 Sunday, March 6, 2011 7 Sunday, March 6, 2011 Evolution is “the simple way by which species (populations) become exquisitely adapted to various ends” 8 Sunday, March 6, 2011 All characteristics are due to the four forces • Mutation creates new alleles - new variation • Genetic drift moves these around by chance • Gene flow moves these from one population to the next creating clines • Natural selection increases and decreases them in frequency through adaptation 9 Sunday, March 6, 2011 Clines
    [Show full text]
  • FOUR FORCES Natural Selection Mutation Genetic Drift Gene Flow
    FOUR FORCES Natural Selection Mutation Genetic Drift Gene Flow NATURAL SELECTION Driving Force - DIRECTIONAL Acts on variation in population Therefore, most be VARIATION to begin with Where does variation come from? Ultimate source? MUTATION We think of mutation as deleterious, but NO - must have or no evolution Some mutations are advantageous Natural Selection operates on both kinds of MUTATION Also affecting variation is: GENETIC DRIFT Definition: RANDOM FLUCTUATIONS IN THE FREQUENCY OF AN ALLELE FROM GENERATION TO GENERATON IF the variation is neutral – then just RANDOM CHANCE if the allele is passed on -sometimes is passed on, sometimes not- 50/50 odds IF few people have the allele, just by CHANCE could disappear The smaller the population, the greater the chance the allele will disappear For example: Population with 10% Blue Eyes 2 -earthquake- just by chance 10 people with blue eyes die if population is 1 million, 100,000 people have blue eyes no effect BUT if population is 100 and 10 die, blue allele decreased A LOT NOTE: eye color is a NEUTRAL VARIATION- not affect likelihood of dying in an earthquake GENETIC DRIFT affects NEUTRAL ALLELES General tendency is to reduce variation INTERESTING KIND of GENETIC DRIFT: FOUNDER’S EFFECT Subset of a large population leaves and starts its own population BIG GROUP leaves: chances that allele frequencies will be the same SMALL GROUP leaves: increase chances allele frequencies will be different (sampling) Mutiny on the Bounty, Pitcairn Island M&Ms GENE FLOW (Also called admixture) result of:
    [Show full text]
  • Selection in Finite Populations with Multiple Alleles
    SELECTION IN FINITE POPULATIONS WITH MULTIPLE ALLELES. 111. GENETIC DIVERGENCE WITH CENTRIPETAL SELECTION AND MUTATION B. D. H. LATTER Division of Animal Genetics, C.S.I.R.O., Sydney, N.S.W., Australia Manuscript received April 28, 1971 Revised copy received December 6, 1971 ABSTRACT Natural selection for an intermediate level of gene or enzyme activity has been shown to lead to a high frequency of heterotic polymorphisms in popula- tions subject to mutation and random genetic drift. The model assumes a sym- metrical spectrum of mutational variation, with the majority of variants having only minor effects on the probability of survival. Each mutational event produces a variant which is novel to the population. Allelic effects are assumed to be additive on the scale of enzyme activity, heterosis arising whenever a heterozygote has a mean level of activity closer to optimal than that of other genotypes in the population.-A new measure of genetic divergence between populations is proposed, which is readily interpreted genetically, and increases approximately linearly with time under centripetal selection, drift and muta- tion. The parameter is closely related to the rate of accumulation of muta- tional changes in a cistron over an evolutionary time span.--A survey of published data concerning polymorphic loci in man and Drosophila suggests than an alternative model, based on the superiority of hybrid molecules, is not of general importance. Thirteen loci giving rise to hybrid zones on electrophor- esis have a mean heterozygote frequency of 0 22 rfr .OS, compared with a value of 0.23 i: .04 for 16 loci classified as producing no hybrid enzyme.
    [Show full text]
  • Interpretation of Patterns of Genetic Variation in Endemic Plant Species of Oceanic Islands
    bs_bs_banner Botanical Journal of the Linnean Society, 2014, 174, 276–288. REVIEW ARTICLE Interpretation of patterns of genetic variation in endemic plant species of oceanic islands TOD F. STUESSY1*, KOJI TAKAYAMA1†, PATRICIO LÓPEZ-SEPÚLVEDA1‡ and DANIEL J. CRAWFORD2 1Department of Systematic and Evolutionary Botany, Biodiversity Center, University of Vienna, Rennweg 14, A-1030 Vienna, Austria 2Department of Ecology & Evolutionary Biology and the Biodiversity Institute, University of Kansas, Lawrence, KS 66045, USA Received 28 January 2013; revised 18 April 2013; accepted for publication 7 July 2013 Oceanic islands offer special opportunities for understanding the patterns and processes of evolution. The availability of molecular markers in recent decades has enhanced these opportunities, facilitating the use of population genetics to reveal divergence and speciation in island systems. A common pattern seen in taxa on oceanic islands is a decreased level of genetic variation within and among populations, and the founder effect has often been invoked to explain this observation. Founder effects have a major impact on immigrant populations, but, over millions of years, the original genetic signature will normally be erased as a result of mutation, recombination, drift and selection. Therefore, the types and degrees of genetic modifications that occur must often be caused by other factors, which should be considered when explaining the patterns of genetic variation. The age of the island is extremely important because oceanic islands subside on their submarine plates over time. Erosion caused by wind, rain and wave action combine to grind down soft volcanic substrates. These geomorphological events can have a dramatic impact on population number and size, and hence levels of genetic diversity.
    [Show full text]
  • Paleontology and the History of Life
    36954_u01.qxd 7/11/08 2:01 PM Page 80 Paleontology and the History of Life Michael Benton And out of the ground the Lord God formed every beast of the field, and every fowl of the air; and brought them unto Adam to see what he would call them: and whatsoever Adam called every living creature, that was the name thereof. Genesis 2:19 People have always been astounded by the diversity of life, although perhaps in different ways. In prescientific times farmers saw how their crops and live- stock were merely part of a much larger richness of life, and people have al- ways striven to understand the complexity and arrangement of living things. From Aristotle to Linnaeus, scientists attempted to catalog life and to under- stand where it had come from. During the eighteenth century it became clear to all savants that the earth had been populated formerly by strange and mar- velous creatures that had since become extinct. By 1820 some rough picture of the succession of floras and faunas through geological time was beginning to emerge. Charles Darwin, during the voyage of HMS Beagle in the early 1830s, became increasingly convinced that life was more diverse than he had imagined—every island he visited sported a new crop of plants and animals. He saw the lateral (geographic) and vertical (historic) links between species and realized by 1837 that species were all linked by a great tree. The tree con- cept made it clear why species that in his time were geographically close should also be genealogically close.
    [Show full text]
  • Ecological and Life History Characteristics Predict Population Genetic Divergence of Two Salmonids in the Same Landscape
    Molecular Ecology (2004) 13, 3675–3688 doi: 10.1111/j.1365-294X.2004.02365.x EcologicalBlackwell Publishing, Ltd. and life history characteristics predict population genetic divergence of two salmonids in the same landscape ANDREW R. WHITELEY, PAUL SPRUELL and FRED W. ALLENDORF Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA Abstract Ecological and life history characteristics such as population size, dispersal pattern, and mating system mediate the influence of genetic drift and gene flow on population subdivision. Bull trout (Salvelinus confluentus) and mountain whitefish (Prosopium williamsoni) differ markedly in spawning location, population size and mating system. Based on these differences, we predicted that bull trout would have reduced genetic variation within and greater differ- entiation among populations compared with mountain whitefish. To test this hypothesis, we used microsatellite markers to determine patterns of genetic divergence for each species in the Clark Fork River, Montana, USA. As predicted, bull trout had a much greater propor- tion of genetic variation partitioned among populations than mountain whitefish. Among all sites, FST was seven times greater for bull trout (FST = 0.304 for bull trout, 0.042 for moun- tain whitefish. After removing genetically differentiated high mountain lake sites for each species FST, was 10 times greater for bull trout (FST = 0.176 for bull trout; FST = 0.018 for mountain whitefish). The same characteristics that affect dispersal patterns in these species also lead to predictions about the amount and scale of adaptive divergence among popula- tions. We provide a theoretical framework that incorporates variation in ecological and life history factors, neutral divergence, and adaptive divergence to interpret how neutral and adaptive divergence might be correlates of ecological and life history factors.
    [Show full text]
  • Concepts and Methods
    CONCEPTS AND PART METHODS I THE CONCEPT CHAPTER OF MICROBIAL SPECIES 1 INTRODUCTION Chapter contents What distinguishes microbiology from other disciplines of biology? This question no longer has a straightforward answer that can satisfy all biologists. The traditional answer focused Old and new challenges for assessing on the extremely small size of organisms under investigation; however, this leaves little room microbial diversity for distinction on the basis of taxonomy because practically all organisms have a microscopic Traditional concepts of species stage during their life cycles. Some organisms that are physiologically closely related to large Typological species concept macroscopic organisms spend their entire life span as microscopic organisms. Nevertheless, Morphological species concept physical size remains a dominant conceptual framework for most practicing microbiologists, Biological species concept and most of the discussion in this book is presented from this perspective. Other responses Evolutionary species concept have focused on unicellularity (as opposed to multicellularity) as the defining characteristic Other concepts of microorganisms, however, viruses are acellular, and many investigators have argued that the so-called unicellular stage of bacteria, for example, is not a naturally occurring phe- Species concepts for prokaryotes nomenon. Some investigators have advanced the cellularity argument by invoking differen- tiation as the separating principle, but many “unicellular” organisms also go through Theoretical mechanisms
    [Show full text]
  • Divergence, Gene Flow, and Speciation in Eight Lineages of Trans‐Beringian Birds
    Received: 2 May 2019 | Revised: 22 July 2020 | Accepted: 27 July 2020 DOI: 10.1111/mec.15574 ORIGINAL ARTICLE Divergence, gene flow, and speciation in eight lineages of trans-Beringian birds Jessica F. McLaughlin1,2 | Brant C. Faircloth3 | Travis C. Glenn4 | Kevin Winker1 1University of Alaska Museum, Fairbanks, AK, USA Abstract 2Sam Noble Oklahoma Museum of Natural Determining how genetic diversity is structured between populations that span the History, Norman, OK, USA divergence continuum from populations to biological species is key to understanding 3Department of Biological Sciences and Museum of Natural Science, Louisiana State the generation and maintenance of biodiversity. We investigated genetic divergence University, Baton Rouge, LA, USA and gene flow in eight lineages of birds with a trans-Beringian distribution, where 4 Department of Environmental Health Asian and North American populations have likely been split and reunited through Science and Institute of Bioinformatics, University of Georgia, Athens, GA, USA multiple Pleistocene glacial cycles. Our study transects the speciation process, in- cluding eight pairwise comparisons in three orders (ducks, shorebirds and passer- Correspondence Kevin Winker, University of Alaska Museum, ines) at population, subspecies and species levels. Using ultraconserved elements 907 Yukon Drive, Fairbanks, AK 99775, USA. (UCEs), we found that these lineages represent conditions from slightly differentiated Email: [email protected] populations to full biological species. Although allopatric speciation is considered Funding information the predominant mode of divergence in birds, all of our best divergence models in- National Science Foundation, Grant/Award Number: DEB-1242267-1242241-1242260 cluded gene flow, supporting speciation with gene flow as the predominant mode in Beringia.
    [Show full text]