Methods for Ecological Monitoring: Biological Interactions in a Rocky Subtidal Community H
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Biogeography, Community Structure and Biological Habitat Types of Subtidal Reefs on the South Island West Coast, New Zealand
Biogeography, community structure and biological habitat types of subtidal reefs on the South Island West Coast, New Zealand SCIENCE FOR CONSERVATION 281 Biogeography, community structure and biological habitat types of subtidal reefs on the South Island West Coast, New Zealand Nick T. Shears SCIENCE FOR CONSERVATION 281 Published by Science & Technical Publishing Department of Conservation PO Box 10420, The Terrace Wellington 6143, New Zealand Cover: Shallow mixed turfing algal assemblage near Moeraki River, South Westland (2 m depth). Dominant species include Plocamium spp. (yellow-red), Echinothamnium sp. (dark brown), Lophurella hookeriana (green), and Glossophora kunthii (top right). Photo: N.T. Shears Science for Conservation is a scientific monograph series presenting research funded by New Zealand Department of Conservation (DOC). Manuscripts are internally and externally peer-reviewed; resulting publications are considered part of the formal international scientific literature. Individual copies are printed, and are also available from the departmental website in pdf form. Titles are listed in our catalogue on the website, refer www.doc.govt.nz under Publications, then Science & technical. © Copyright December 2007, New Zealand Department of Conservation ISSN 1173–2946 (hardcopy) ISSN 1177–9241 (web PDF) ISBN 978–0–478–14354–6 (hardcopy) ISBN 978–0–478–14355–3 (web PDF) This report was prepared for publication by Science & Technical Publishing; editing and layout by Lynette Clelland. Publication was approved by the Chief Scientist (Research, Development & Improvement Division), Department of Conservation, Wellington, New Zealand. In the interest of forest conservation, we support paperless electronic publishing. When printing, recycled paper is used wherever possible. CONTENTS Abstract 5 1. Introduction 6 2. -
Descriptions of New Serpulid Polychaetes from the Kimberleys Of
© The Author, 2009. Journal compilation © Australian Museum, Sydney, 2009 Records of the Australian Museum (2009) Vol. 61: 93–199. ISSN 0067-1975 doi:10.3853/j.0067-1975.61.2009.1489 Descriptions of New Serpulid Polychaetes from the Kimberleys of Australia and Discussion of Australian and Indo-West Pacific Species of Spirobranchus and Superficially Similar Taxa T. Gottfried Pillai Zoology Department, Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom absTracT. In 1988 Pat Hutchings of the Australian Museum, Sydney, undertook an extensive polychaete collection trip off the Kimberley coast of Western Australia, where such a survey had not been conducted since Augener’s (1914) description of some polychaetes from the region. Serpulids were well represented in the collection, and their present study revealed the existence of two new genera, and new species belonging to the genera Protula, Vermiliopsis, Hydroides, Serpula and Spirobranchus. The synonymy of the difficult genera Spirobranchus, Pomatoceros and Pomatoleios is also dealt with. Certain difficult taxa currently referred to as “species complexes” or “species groups” are discussed. For this purpose it was considered necessary to undertake a comparison of apparently similar species, especially of Spirobranchus, from other locations in Australia and the Indo-West Pacific region. It revealed the existence of many more new species, which are also described and discussed below. Pillai, T. Gottfried, 2009. Descriptions of new serpulid polychaetes from the Kimberleys of Australia and discussion of Australian and Indo-West Pacific species ofSpirobranchus and superficially similar taxa.Records of the Australian Museum 61(2): 93–199. Table of contents Introduction ................................................................................................................... 95 Material and methods .................................................................................................. -
Phylogenetic Relationships of Serpulidae (Annelida: Polychaeta) Based on 18S Rdna Sequence Data, and Implications for Opercular Evolution Janina Lehrkea,Ã, Harry A
ARTICLE IN PRESS Organisms, Diversity & Evolution 7 (2007) 195–206 www.elsevier.de/ode Phylogenetic relationships of Serpulidae (Annelida: Polychaeta) based on 18S rDNA sequence data, and implications for opercular evolution Janina Lehrkea,Ã, Harry A. ten Hoveb, Tara A. Macdonaldc, Thomas Bartolomaeusa, Christoph Bleidorna,1 aInstitute for Zoology, Animal Systematics and Evolution, Freie Universitaet Berlin, Koenigin-Luise-Street 1-3, 14195 Berlin, Germany bZoological Museum, University of Amsterdam, P.O. Box 94766, 1090 GT Amsterdam, The Netherlands cBamfield Marine Sciences Centre, Bamfield, British Columbia, Canada, V0R 1B0 Received 19 December 2005; accepted 2 June 2006 Abstract Phylogenetic relationships of (19) serpulid taxa (including Spirorbinae) were reconstructed based on 18S rRNA gene sequence data. Maximum likelihood, Bayesian inference, and maximum parsimony methods were used in phylogenetic reconstruction. Regardless of the method used, monophyly of Serpulidae is confirmed and four monophyletic, well- supported major clades are recovered: the Spirorbinae and three groups hitherto referred to as the Protula-, Serpula-, and Pomatoceros-group. Contrary to the taxonomic literature and the hypothesis of opercular evolution, the Protula- clade contains non-operculate (Protula, Salmacina) and operculate taxa both with pinnulate and non-pinnulate peduncle (Filograna vs. Vermiliopsis), and most likely is the sister group to Spirorbinae. Operculate Serpulinae and poorly or non-operculate Filograninae are paraphyletic. It is likely that lack of opercula in some serpulid genera is not a plesiomorphic character state, but reflects a special adaptation. r 2007 Gesellschaft fu¨r Biologische Systematik. Published by Elsevier GmbH. All rights reserved. Keywords: Serpulidae; Phylogeny; Operculum; 18S rRNA gene; Annelida; Polychaeta Introduction distinctive calcareous tubes and bilobed tentacular crowns, each with numerous radioles that bear shorter Serpulids are common members of marine hard- secondary branches (pinnules) on the inner side. -
Genetic Methods for Estimating the Effective Size of Cetacean Populations
Genetic Methods for Estimating the Effective Size of Cetacean Populations Robin S. Waples Northwest Fisheries Center, National Marine Fisheries Service, 2725 Montlake Boulevard East, Seattle, Washington 98112, USA ABSTRACT Some indirect (genetic) methods for estimating effective population size (N,) are evaluated for their suitability in studyingcetacean populations. The methodscan be grouped into those that (1) estimate current N,, (2) estimate long-term N, and (3) provide information about recent genetic bottlenecks. The methods that estimate current effective size are best suited for the analysis of small populations. and nonrandom sampling and population subdivision are probably the most serious sources of potential bias. Methods that estimate long-term N, are best suited to the analysis of large populations or entire species, may be more strongly influenced by natural selection and depend on accurate estimates of mutation or DNA base substitution rates. Precision of the estimates of N, is likely to be a limiting factor in many applications of the indirect methods. Keywords: genetics; assessment: cetaceans - general: evolution. INTRODUCTION Population size is one of the most important factors that determine the rate of various evolutionary processes, and it appears as a parameter in many of the fundamental equations of population genetics. However, knowledge merely of the total number of individuals (N) in a population is not sufficient for an accurate description of these evolutionary processes. Because of the influence of demographic parameters, two populations of the same total size may experience very different rates of genetic change. Wright (1931; 1938) developed the concept of effective population size (N,) as a way of summarising relevant demographic information so that one can predict the evolutionary consequences of finite population size (see Fig. -
Ecological Principles and Function of Natural Ecosystems by Professor Michel RICARD
Intensive Programme on Education for sustainable development in Protected Areas Amfissa, Greece, July 2014 ------------------------------------------------------------------------ Ecological principles and function of natural ecosystems By Professor Michel RICARD Summary 1. Hierarchy of living world 2. What is Ecology 3. The Biosphere - Lithosphere - Hydrosphere - Atmosphere 4. What is an ecosystem - Ecozone - Biome - Ecosystem - Ecological community - Habitat/biotope - Ecotone - Niche 5. Biological classification 6. Ecosystem processes - Radiation: heat, temperature and light - Primary production - Secondary production - Food web and trophic levels - Trophic cascade and ecology flow 7. Population ecology and population dynamics 8. Disturbance and resilience - Human impacts on resilience 9. Nutrient cycle, decomposition and mineralization - Nutrient cycle - Decomposition 10. Ecological amplitude 11. Ecology, environmental influences, biological interactions 12. Biodiversity 13. Environmental degradation - Water resources degradation - Climate change - Nutrient pollution - Eutrophication - Other examples of environmental degradation M. Ricard: Summer courses, Amfissa July 2014 1 1. Hierarchy of living world The larger objective of ecology is to understand the nature of environmental influences on individual organisms, populations, communities and ultimately at the level of the biosphere. If ecologists can achieve an understanding of these relationships, they will be well placed to contribute to the development of systems by which humans -
Community Ecology
Schueller 509: Lecture 12 Community ecology 1. The birds of Guam – e.g. of community interactions 2. What is a community? 3. What can we measure about whole communities? An ecology mystery story If birds on Guam are declining due to… • hunting, then bird populations will be larger on military land where hunting is strictly prohibited. • habitat loss, then the amount of land cleared should be negatively correlated with bird numbers. • competition with introduced black drongo birds, then….prediction? • ……. come up with a different hypothesis and matching prediction! $3 million/yr Why not profitable hunting instead? (Worked for the passenger pigeon: “It was the demographic nightmare of overkill and impaired reproduction. If you’re killing a species far faster than they can reproduce, the end is a mathematical certainty.” http://www.audubon.org/magazine/may-june- 2014/why-passenger-pigeon-went-extinct) Community-wide effects of loss of birds Schueller 509: Lecture 12 Community ecology 1. The birds of Guam – e.g. of community interactions 2. What is a community? 3. What can we measure about whole communities? What is an ecological community? Community Ecology • Collection of populations of different species that occupy a given area. What is a community? e.g. Microbial community of one human “YOUR SKIN HARBORS whole swarming civilizations. Your lips are a zoo teeming with well- fed creatures. In your mouth lives a microbiome so dense —that if you decided to name one organism every second (You’re Barbara, You’re Bob, You’re Brenda), you’d likely need fifty lifetimes to name them all. -
Can More K-Selected Species Be Better Invaders?
Diversity and Distributions, (Diversity Distrib.) (2007) 13, 535–543 Blackwell Publishing Ltd BIODIVERSITY Can more K-selected species be better RESEARCH invaders? A case study of fruit flies in La Réunion Pierre-François Duyck1*, Patrice David2 and Serge Quilici1 1UMR 53 Ӷ Peuplements Végétaux et ABSTRACT Bio-agresseurs en Milieu Tropical ӷ CIRAD Invasive species are often said to be r-selected. However, invaders must sometimes Pôle de Protection des Plantes (3P), 7 chemin de l’IRAT, 97410 St Pierre, La Réunion, France, compete with related resident species. In this case invaders should present combina- 2UMR 5175, CNRS Centre d’Ecologie tions of life-history traits that give them higher competitive ability than residents, Fonctionnelle et Evolutive (CEFE), 1919 route de even at the expense of lower colonization ability. We test this prediction by compar- Mende, 34293 Montpellier Cedex, France ing life-history traits among four fruit fly species, one endemic and three successive invaders, in La Réunion Island. Recent invaders tend to produce fewer, but larger, juveniles, delay the onset but increase the duration of reproduction, survive longer, and senesce more slowly than earlier ones. These traits are associated with higher ranks in a competitive hierarchy established in a previous study. However, the endemic species, now nearly extinct in the island, is inferior to the other three with respect to both competition and colonization traits, violating the trade-off assumption. Our results overall suggest that the key traits for invasion in this system were those that *Correspondence: Pierre-François Duyck, favoured competition rather than colonization. CIRAD 3P, 7, chemin de l’IRAT, 97410, Keywords St Pierre, La Réunion Island, France. -
Annelida, Serpulidae
Graellsia, 72(2): e053 julio-diciembre 2016 ISSN-L: 0367-5041 http://dx.doi.org/10.3989/graellsia.2016.v72.120 SERPÚLIDOS (ANNELIDA, SERPULIDAE) COLECTADOS EN LA CAMPAÑA OCEANOGRÁFICA “FAUNA II” Y CATÁLOGO ACTUALIZADO DE ESPECIES ÍBERO-BALEARES DE LA FAMILIA SERPULIDAE Jesús Alcázar* & Guillermo San Martín Departamento de Biología (Zoología), Facultad de Ciencias, Universidad Autónoma de Madrid, calle Darwin, 2, Canto Blanco, 28049 Madrid, España. *Dirección para la correspondencia: [email protected] RESUMEN Se presentan los resultados de la identificación del material de la familia Serpulidae (Polychaeta) recolectado en la campaña oceanográfica Fauna II, así como la revisión de citas de presencia íbero-balear desde el catálogo de poliquetos más reciente (Ariño, 1987). Se identificaron 16 especies pertenecientes a 10 géneros, además de la primera cita íbero-balear de una quimera bioperculada (Ten Hove & Ben-Eliahu, 2005) de la especie Hydroides norvegicus Gunnerus, 1768. En cuanto a la revisión del catálogo se mencionan 65 especies, actuali- zando el nombre de 20 de ellas y añadiendo cinco especies ausentes en el catálogo de Ariño (1987): Hydroides stoichadon Zibrowius, 1971, Laeospira corallinae (de Silva & Knight-Jones, 1962), Serpula cavernicola Fassari & Mòllica, 1991, Spirobranchus lima (Grube, 1862) y Spirorbis inornatus L’Hardy & Quièvreux, 1962. Se cita por primera vez Vermiliopsis monodiscus Zibrowius, 1968 en el Atlántico ibérico y a partir de la bibliografía consultada, se muestra la expansión en la distribución íbero-balear -
An EST Screen from the Annelid Pomatoceros Lamarckii Reveals
BMC Evolutionary Biology BioMed Central Research article Open Access An EST screen from the annelid Pomatoceros lamarckii reveals patterns of gene loss and gain in animals Tokiharu Takahashi*1,4, Carmel McDougall2,4,6, Jolyon Troscianko3, Wei- Chung Chen4, Ahamarshan Jayaraman-Nagarajan5, Sebastian M Shimeld4 and David EK Ferrier*2,4 Address: 1Faculty of Life Sciences, University of Manchester, Oxford Road, Manchester, UK, 2The Scottish Oceans Institute, University of St. Andrews, St. Andrews, Fife, UK, 3Centre for Ornithology, School of Biosciences, University of Birmingham, Edgbaston, Birmingham, UK, 4Department of Zoology, University of Oxford, South Parks Road, Oxford, UK, 5Department of Biochemistry, University of Oxford, South Parks Road, Oxford, UK and 6School of Biological Sciences, University of Queensland, St Lucia, Queensland, Australia Email: Tokiharu Takahashi* - [email protected]; Carmel McDougall - [email protected]; Jolyon Troscianko - [email protected]; Wei-Chung Chen - [email protected]; Ahamarshan Jayaraman- Nagarajan - [email protected]; Sebastian M Shimeld - [email protected]; David EK Ferrier* - dekf@st- andrews.ac.uk * Corresponding authors Published: 25 September 2009 Received: 1 April 2009 Accepted: 25 September 2009 BMC Evolutionary Biology 2009, 9:240 doi:10.1186/1471-2148-9-240 This article is available from: http://www.biomedcentral.com/1471-2148/9/240 © 2009 Takahashi et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. -
2016 North Sea Expedition: PRELIMINARY REPORT
2016 North Sea Expedition: PRELIMINARY REPORT February, 2017 All photos contained in this report are © OCEANA/Juan Cuetos OCEANA ‐ 2016 North Sea Expedition Preliminary Report INDEX 1. INTRODUCTION ..................................................................................................................... 2 1.1 Objective ............................................................................................................................. 3 2. METHODOLOGY .................................................................................................................... 4 3. RESULTS ................................................................................................................................. 6 a. Area 1: Transboundary Area ............................................................................................. 7 b. Area 2: Norwegian trench ............................................................................................... 10 4. ANNEX – PHOTOS ................................................................................................................ 31 1 OCEANA ‐ 2016 North Sea Expedition Preliminary Report 1. INTRODUCTION The North Sea is one of the most productive seas in the world, with a wide range of plankton, fish, seabirds, and organisms that live on the seafloor. It harbours valuable marine ecosystems like cold water reefs and seagrass meadows, and rich marine biodiversity including whales, dolphins, sharks and a wealth of commercial fish species. It is also of high socio‐ -
National Wildlife Federation's Community Wildlife Habitat
National Wildlife Federation’s Community Wildlife Habitat Certification Requirements To achieve certification through the National Wildlife Federation’s Community Wildlife Habitat program, you must create or restore wildlife habitat in your community and do education and outreach. First, a certain number of homes, schools and common areas must become National Wildlife Federation Certified Wildlife Habitats by providing the four basic elements that all wildlife need: food, water, cover and places to raise young. The NWF Certified Wildlife Habitat program also requires sustainable gardening practices such as using rain barrels, reducing water usage, removing invasive plants, using native plants and eliminating pesticides. These requirements are based on population – see chart below. Second, communities earn education and outreach points through a flexible checklist that includes educating citizens at community events, hosting a native plant sale, organizing a stream clean up, bringing new partners to the effort and hosting workshops – see pages 2 and 3. Property Certification Requirements: Minimum Habitat Sliding Scale Based on Activity / Type of Certification Points Certification Points Population Size For each home certified, including townhomes and apartments 1 20 500 or Less For each common area certified, including public parks, HOA common 40 501-1,000 areas, businesses, places of worship, farms, universities and municipal 3 100 1,001-5000 buildings 150 5,001-10,000 For each school certified as an NWF Schoolyard Habitat - Pre-K - 12 or 175 10,001-15,000 5 nature center 200 15,001-20,000 225 20,001-25,000 250 25,001-50,000 VERIFICATION: Each home or common area must be certified within 15 300 50,001-100,000 years of a community's registration date to count for points. -
Integrating Community and Ecosystem-Based Approaches in Climate
Integrating Community and Ecosystem-Based Approaches in Climate Change Adaptation i Responses This paper is the result of extensive discussions led by adaptation professionals coming from different backgrounds and facilitated by the Ecosystem and Livelihoods Adaptation Network (ELAN).ii ELAN is an innovative alliance between two conservation organisations (International Union for the Conservation of Nature [IUCN] and WWF) and two development organisations (CARE International and the International Institute for Environment and Development [IIED]). The objective of ELAN is to establish a global network to develop, evaluate, synthesize and share successful strategies for adapting to climate change, build capacity for such strategies to be assessed and implemented at national and sub-national levels, and advance policies and knowledge sharing platforms that will facilitate the scaling up of effective strategies. Two emerging approaches to adaptation have gained currency over the past few years, namely Community-based Adaptation (CBA) and Ecosystem-based Adaptation (EBA). Each has its specific emphasis, the first on empowering local communities to reduce their vulnerabilities, and the latter on harnessing the management of ecosystems as a means to provide goods and services in the face of climate change. In this paper, ELAN argues for a more truly “integrated approach” to adaptation that addresses and seeks to reconcile differences between CBA and EBA. ELAN has developed a conceptual framework for an approach to adaptation, which empowers