2016 North Sea Expedition: PRELIMINARY REPORT
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Bacteria Associated with Tunicate, Polycarpa Aurata, from Lease Sea, Maluku, Indonesia Exhibiting Anti-Multidrug Resistant Bacteria
BIODIVERSITAS ISSN: 1412-033X Volume 20, Number 4, April 2019 E-ISSN: 2085-4722 Pages: 956-964 DOI: 10.13057/biodiv/d200404 Bacteria associated with tunicate, Polycarpa aurata, from Lease Sea, Maluku, Indonesia exhibiting anti-multidrug resistant bacteria DIAH AYUNINGRUM1,5, RHESI KRISTIANA1, AYUNDA AINUN NISA2, SEPTHY KUSUMA RADJASA2, SAKTI IMAM MUCHLISSIN2,4, OCKY KARNA RADJASA2,3, AGUS SABDONO2, AGUS TRIANTO2, 1Department of Coastal Resource Management, Faculty of Fisheries and Marine Science, Universitas Diponegoro. Jl. Prof. Soedharto SH, Semarang 50275, Central Java, Indonesia 2Department of Marine Science, Faculty of Fisheries and Marine Science, Universitas Diponegoro. Jl. Prof. Soedarto, SH, Tembalang, Semarang 50275, Central Java, Indonesia. Tel.: +62-24-7474698, Fax.: +62-24-7474698, email: [email protected]. 3Directorate of Research and Community Services, Ministry of Research, Technology and Higher Education. D Building, Jl. Jenderal Sudirman Pintu Satu, Senayan, Jakarta Pusat 10279, Indonesia 4Tropical Marine Biotechnology Laboratory, Universitas Diponegoro Jl. Lingkar Utara Undip, Semarang 50275, Central Java, Indonesia 1Department of Aquatic Resource Management, Faculty of Fisheries and Marine Science, Universitas Diponegoro. Jl. Prof. Soedharto SH, Semarang 50275, Central Java, Indonesia Manuscript received: 30 January 2019. Revision accepted: 10 March 2019. Abstract. Ayuningrum D, Kristiana R, Nisa AA, Radjasa SK, Muchlissin SI, Radjasa OK, Sabdono A, Trianto A. 2019. Bacteria associated with tunicate, Polycarpa aurata, from Lease Sea, Maluku, Indonesia exhibiting anti-multidrug resistant bacteria. Biodiversitas 20: 956-964. Tunicate is a rich secondary metabolites producer with various biological activities whether as an original producer or produced by the associated microorganisms. In this study, a total of 11 tunicate specimens were identified as Polycarpa aurata with four color variations based on morphological characteristic and COI gene identification and BLAST analysis. -
Download (8MB)
https://theses.gla.ac.uk/ Theses Digitisation: https://www.gla.ac.uk/myglasgow/research/enlighten/theses/digitisation/ This is a digitised version of the original print thesis. Copyright and moral rights for this work are retained by the author A copy can be downloaded for personal non-commercial research or study, without prior permission or charge This work cannot be reproduced or quoted extensively from without first obtaining permission in writing from the author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Enlighten: Theses https://theses.gla.ac.uk/ [email protected] ASPECTS OF THE BIOLOGY OF THE SQUAT LOBSTER, MUNIDA RUGOSA (FABRICIUS, 1775). Khadija Abdulla Yousuf Zainal, BSc. (Cairo). A thesis submitted for the degree of Doctor of Philosophy to the Faculty of Science at the University of Glasgow. August 1990 Department of Zoology, University of Glasgow, Glasgow, G12 8QQ. University Marine Biological Station, Millport, Isle of Cumbrae, Scotland KA28 OEG. ProQuest Number: 11007559 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest 11007559 Published by ProQuest LLC(2018). -
Descriptions of New Serpulid Polychaetes from the Kimberleys Of
© The Author, 2009. Journal compilation © Australian Museum, Sydney, 2009 Records of the Australian Museum (2009) Vol. 61: 93–199. ISSN 0067-1975 doi:10.3853/j.0067-1975.61.2009.1489 Descriptions of New Serpulid Polychaetes from the Kimberleys of Australia and Discussion of Australian and Indo-West Pacific Species of Spirobranchus and Superficially Similar Taxa T. Gottfried Pillai Zoology Department, Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom absTracT. In 1988 Pat Hutchings of the Australian Museum, Sydney, undertook an extensive polychaete collection trip off the Kimberley coast of Western Australia, where such a survey had not been conducted since Augener’s (1914) description of some polychaetes from the region. Serpulids were well represented in the collection, and their present study revealed the existence of two new genera, and new species belonging to the genera Protula, Vermiliopsis, Hydroides, Serpula and Spirobranchus. The synonymy of the difficult genera Spirobranchus, Pomatoceros and Pomatoleios is also dealt with. Certain difficult taxa currently referred to as “species complexes” or “species groups” are discussed. For this purpose it was considered necessary to undertake a comparison of apparently similar species, especially of Spirobranchus, from other locations in Australia and the Indo-West Pacific region. It revealed the existence of many more new species, which are also described and discussed below. Pillai, T. Gottfried, 2009. Descriptions of new serpulid polychaetes from the Kimberleys of Australia and discussion of Australian and Indo-West Pacific species ofSpirobranchus and superficially similar taxa.Records of the Australian Museum 61(2): 93–199. Table of contents Introduction ................................................................................................................... 95 Material and methods .................................................................................................. -
Zootaxa,Crustacean Classification
Zootaxa 1668: 313–325 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Crustacean classification: on-going controversies and unresolved problems* GEOFF A. BOXSHALL Department of Zoology, The Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom E-mail: [email protected] *In: Zhang, Z.-Q. & Shear, W.A. (Eds) (2007) Linnaeus Tercentenary: Progress in Invertebrate Taxonomy. Zootaxa, 1668, 1–766. Table of contents Abstract . 313 Introduction . 313 Treatment of parasitic Crustacea . 315 Affinities of the Remipedia . 316 Validity of the Entomostraca . 318 Exopodites and epipodites . 319 Using of larval characters in estimating phylogenetic relationships . 320 Fossils and the crustacean stem lineage . 321 Acknowledgements . 322 References . 322 Abstract The journey from Linnaeus’s original treatment to modern crustacean systematics is briefly characterised. Progress in our understanding of phylogenetic relationships within the Crustacea is linked to continuing discoveries of new taxa, to advances in theory and to improvements in methodology. Six themes are discussed that serve to illustrate some of the major on-going controversies and unresolved problems in the field as well as to illustrate changes that have taken place since the time of Linnaeus. These themes are: 1. the treatment of parasitic Crustacea, 2. the affinities of the Remipedia, 3. the validity of the Entomostraca, 4. exopodites and epipodites, 5. using larval characters in estimating phylogenetic rela- tionships, and 6. fossils and the crustacean stem-lineage. It is concluded that the development of the stem lineage concept for the Crustacea has been dominated by consideration of taxa known only from larval or immature stages. -
(Eledone Cirrhosa) in Atlantic Iberian Waters
Manuscript + Figure captions Click here to download Manuscript Eledone cirrhosa diet.docx Click here to view linked References 1 Factors affecting the feeding patterns of the horned octopus ( Eledone 2 cirrhosa ) in Atlantic Iberian waters 3 4 M. Regueira 1,2* , Á.Guerra 1, C.M. Fernández-Jardón 3,Á.F. González 1 5 6 1Instituto de Investigaciones Marinas (IIM-CSIC), Eduardo Cabello 6, 36208 Vigo, Spain. 7 2Departamento de Biologia, Universidade de Aveiro. 3810-193 Aveiro, Portugal. 8 3Facultad de Ciencias Económicas y Empresariales, Departamento de Economía Aplicada, Universidad 9 de Vigo, Campus de Vigo. 36310, Vigo, Spain. 10 11 12 *Corresponding author: [email protected] 13 Tel. (+34) 986 23 19 30 14 Fax. (+34) 986 29 27 62 15 16 17 RUNNING TITLE: Feeding patterns of Eledone cirrhosa 18 KEY WORDS: Cephalopods, Eledone cirrhosa , diet, feeding patterns, Atlantic Iberian waters, 19 Multinomial Logistic Regression. 1 20 Abstract The present study combines morphological and molecular analysis of stomach contents 21 (n=2,355) and Multinomial Logistic Regression (MLR) to understand the diet and feeding patterns of the 22 horned octopus Eledone cirrhosa inhabiting Atlantic Iberian waters. Specimens were collected monthly 23 from commercial bottom trawl fisheries between February 2009 and February 2011 in three fishing 24 grounds (North Galicia, West Galicia and North Portugal), located between 40.6 -43. 6°N and 8.6 -7.36°W. 25 Based on stomach analysis, horned octopuses in the region consumed mainly crustaceans, followed by 26 teleost fish, echinoderms, molluscs and polychaetes. Molecular analysis of 14 stomach contents 27 confirmed the visual identification of pre y items as well as cannibalistic events. -
Calcium Carbonate Biomineralisation in Disparate Systems - Common Mechanisms?
England, Jennifer Katherine (2005) Calcium carbonate biomineralisation in disparate systems - common mechanisms? PhD thesis http://theses.gla.ac.uk/4024/ Copyright and moral rights for this thesis are retained by the author A copy can be downloaded for personal non-commercial research or study, without prior permission or charge This thesis cannot be reproduced or quoted extensively from without first obtaining permission in writing from the Author The content must not be changed in any way or sold commercially in any format or medium without the formal permission of the Author When referring to this work, full bibliographic details including the author, title, awarding institution and date of the thesis must be given Glasgow Theses Service http://theses.gla.ac.uk/ [email protected] Calcium Carbonate Biomineralisation in Disparate Systems - Common Mechanisms? Jennifer Katherine England A thesis submitted for the degree of Doctor of Philosophy Division of Earth Sciences, Centre for Geosciences, University of Glasgow March 2005 © Jennifer England 2005 Abstract Biominerals are composite materials in which orgaruc components control mineral nucleation and structure. Calcium minerals account for over 50% of biominerals, with calcium carbonate being the most common type. This study considers the extent to which four calcium carbonate biomineral systems share common characteristics. Within the sample set, there is a range of ultrastructures and two types of calcium carbonate polymorph (calcite and aragonite). The mini survey includes three invertebrate systems: two members of the Phylum Brachiopoda; the articulated brachiopod Terebratulina retusa (Subphylum Rhynchonelliformea) and the inarticulated brachiopod Novocrania anomala (Subphylum Craniiformea), and a member of the. Mollusca, the bivalve Mytilus edulis. -
Phylogenetic Relationships of Serpulidae (Annelida: Polychaeta) Based on 18S Rdna Sequence Data, and Implications for Opercular Evolution Janina Lehrkea,Ã, Harry A
ARTICLE IN PRESS Organisms, Diversity & Evolution 7 (2007) 195–206 www.elsevier.de/ode Phylogenetic relationships of Serpulidae (Annelida: Polychaeta) based on 18S rDNA sequence data, and implications for opercular evolution Janina Lehrkea,Ã, Harry A. ten Hoveb, Tara A. Macdonaldc, Thomas Bartolomaeusa, Christoph Bleidorna,1 aInstitute for Zoology, Animal Systematics and Evolution, Freie Universitaet Berlin, Koenigin-Luise-Street 1-3, 14195 Berlin, Germany bZoological Museum, University of Amsterdam, P.O. Box 94766, 1090 GT Amsterdam, The Netherlands cBamfield Marine Sciences Centre, Bamfield, British Columbia, Canada, V0R 1B0 Received 19 December 2005; accepted 2 June 2006 Abstract Phylogenetic relationships of (19) serpulid taxa (including Spirorbinae) were reconstructed based on 18S rRNA gene sequence data. Maximum likelihood, Bayesian inference, and maximum parsimony methods were used in phylogenetic reconstruction. Regardless of the method used, monophyly of Serpulidae is confirmed and four monophyletic, well- supported major clades are recovered: the Spirorbinae and three groups hitherto referred to as the Protula-, Serpula-, and Pomatoceros-group. Contrary to the taxonomic literature and the hypothesis of opercular evolution, the Protula- clade contains non-operculate (Protula, Salmacina) and operculate taxa both with pinnulate and non-pinnulate peduncle (Filograna vs. Vermiliopsis), and most likely is the sister group to Spirorbinae. Operculate Serpulinae and poorly or non-operculate Filograninae are paraphyletic. It is likely that lack of opercula in some serpulid genera is not a plesiomorphic character state, but reflects a special adaptation. r 2007 Gesellschaft fu¨r Biologische Systematik. Published by Elsevier GmbH. All rights reserved. Keywords: Serpulidae; Phylogeny; Operculum; 18S rRNA gene; Annelida; Polychaeta Introduction distinctive calcareous tubes and bilobed tentacular crowns, each with numerous radioles that bear shorter Serpulids are common members of marine hard- secondary branches (pinnules) on the inner side. -
JMS 70 1 031-041 Eyh003 FINAL
PHYLOGENY AND HISTORICAL BIOGEOGRAPHY OF LIMPETS OF THE ORDER PATELLOGASTROPODA BASED ON MITOCHONDRIAL DNA SEQUENCES TOMOYUKI NAKANO AND TOMOWO OZAWA Department of Earth and Planetary Sciences, Nagoya University, Nagoya 464-8602,Japan (Received 29 March 2003; accepted 6June 2003) ABSTRACT Using new and previously published sequences of two mitochondrial genes (fragments of 12S and 16S ribosomal RNA; total 700 sites), we constructed a molecular phylogeny for 86 extant species, covering a major part of the order Patellogastropoda. There were 35 lottiid, one acmaeid, five nacellid and two patellid species from the western and northern Pacific; and 34 patellid, six nacellid and three lottiid species from the Atlantic, southern Africa, Antarctica and Australia. Emarginula foveolata fujitai (Fissurellidae) was used as the outgroup. In the resulting phylogenetic trees, the species fall into two major clades with high bootstrap support, designated here as (A) a clade of southern Tethyan origin consisting of superfamily Patelloidea and (B) a clade of tropical Tethyan origin consisting of the Acmaeoidea. Clades A and B were further divided into three and six subclades, respectively, which correspond with geographical distributions of species in the following genus or genera: (AÍ) north eastern Atlantic (Patella ); (A2) southern Africa and Australasia ( Scutellastra , Cymbula-and Helcion)', (A3) Antarctic, western Pacific, Australasia ( Nacella and Cellana); (BÍ) western to northwestern Pacific (.Patelloida); (B2) northern Pacific and northeastern Atlantic ( Lottia); (B3) northern Pacific (Lottia and Yayoiacmea); (B4) northwestern Pacific ( Nipponacmea); (B5) northern Pacific (Acmaea-’ânà Niveotectura) and (B6) northeastern Atlantic ( Tectura). Approximate divergence times were estimated using geo logical events and the fossil record to determine a reference date. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Nudibranquios De La Costa Vasca: El Pequeño Cantábrico Multicolor
Nudibranquios de la Costa Vasca: el pequeño Cantábrico multicolor Recopilación de Nudibranquios fotografiados en Donostia-San Sebastián Luis Mª Naya Garmendia Título: Nudibranquios de la Costa Vasca: el pequeño Cantábrico multicolor © Texto y Fotografías: Luis Mª Naya. Las fotografías del Thecacera pennigera fueron reali- zadas por Michel Ranero y Jesús Carlos Preciado. Editado por el Aquarium de Donostia-San Sebastián Carlos Blasco de Imaz Plaza, 1 20003 Donostia-San Sebastián Tfno.: 943 440099 www.aquariumss.com 2016 Maquetación: Imanol Tapia ISBN: 978-84-942751-04 Dep. Legal: SS-????????? Imprime: Michelena 4 Índice Prólogo, Vicente Zaragüeta ...................................................................... 9 Introducción ................................................................................................... 11 Nudibranquios y otras especies marinas ............................................... 15 ¿Cómo es un nudibranquio? ..................................................................... 18 Una pequeña Introducción Sistemática a los Opistobranquios, Jesús Troncoso ........................................................................................... 25 OPISTOBRANQUIOS .................................................................................... 29 Aplysia fasciata (Poiret, 1789) .............................................................. 30 Aplysia parvula (Morch, 1863) ............................................................. 32 Aplysia punctata (Cuvier, 1803) .......................................................... -
Ascidiacea (Chordata: Tunicata) of Greece: an Updated Checklist
Biodiversity Data Journal 4: e9273 doi: 10.3897/BDJ.4.e9273 Taxonomic Paper Ascidiacea (Chordata: Tunicata) of Greece: an updated checklist Chryssanthi Antoniadou‡, Vasilis Gerovasileiou§§, Nicolas Bailly ‡ Department of Zoology, School of Biology, Aristotle University of Thessaloniki, Thessaloniki, Greece § Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Heraklion, Greece Corresponding author: Chryssanthi Antoniadou ([email protected]) Academic editor: Christos Arvanitidis Received: 18 May 2016 | Accepted: 17 Jul 2016 | Published: 01 Nov 2016 Citation: Antoniadou C, Gerovasileiou V, Bailly N (2016) Ascidiacea (Chordata: Tunicata) of Greece: an updated checklist. Biodiversity Data Journal 4: e9273. https://doi.org/10.3897/BDJ.4.e9273 Abstract Background The checklist of the ascidian fauna (Tunicata: Ascidiacea) of Greece was compiled within the framework of the Greek Taxon Information System (GTIS), an application of the LifeWatchGreece Research Infrastructure (ESFRI) aiming to produce a complete checklist of species recorded from Greece. This checklist was constructed by updating an existing one with the inclusion of recently published records. All the reported species from Greek waters were taxonomically revised and cross-checked with the Ascidiacea World Database. New information The updated checklist of the class Ascidiacea of Greece comprises 75 species, classified in 33 genera, 12 families, and 3 orders. In total, 8 species have been added to the previous species list (4 Aplousobranchia, 2 Phlebobranchia, and 2 Stolidobranchia). Aplousobranchia was the most speciose order, followed by Stolidobranchia. Most species belonged to the families Didemnidae, Polyclinidae, Pyuridae, Ascidiidae, and Styelidae; these 4 families comprise 76% of the Greek ascidian species richness. The present effort revealed the limited taxonomic research effort devoted to the ascidian fauna of Greece, © Antoniadou C et al. -
From the Middle Miocene of Paratethys
Acta Geologica Polonica, Vol. 57 (2007), No. 3, pp. 343-376 Minute patellogastropods (Mollusca, Lottiidae) from the Middle Miocene of Paratethys OLGA ANISTRATENKO1, 3 & VITALIY ANISTRATENKO2, 3 1Institute of Geological Sciences of National Academy of Sciences of the Ukraine, O. Gontchara Str., 55-b, UA-01601, Kiev, Ukraine 2I. I. Schmalhausen Institute of Zoology of National Academy of Sciences of the Ukraine, B. Khmelnitsky Str., 15, UA-01601, Kiev, Ukraine 3Institute of Geological Sciences of Polish Academy of Sciences, Geological Museum, Senacka Str., 1, PL-32-002, Kraków, Poland. E-mails: [email protected], [email protected] ABSTRACT: ANISTRATENKO O. & ANISTRATENKO, V. 2007. Minute patellogastropods (Mollusca, Lottiidae) from the Middle Miocene of Paratethys. Acta Geologica Polonica, 57 (3), 343-376. Warszawa. The protoconch and teleoconch morphology of lottiid patellogastropods that inhabited the Central and Eastern Paratethys in the Badenian and Sarmatian are described and illustrated. Eleven species belong- ing to the genera Tectura, Blinia, Flexitectura and Squamitectura are considered as valid: Tectura laeviga- ta (EICHWALD, 1830), T. compressiuscula (EICHWALD, 1830), T. zboroviensis FRIEDBERG, 1928, T. incogni- ta FRIEDBERG, 1928, Blinia angulata (D’ORBIGNY, 1844), B. pseudolaevigata (SINZOV, 1892), B. reussi (SINZOV, 1892), B. sinzovi (KOLESNIKOV, 1935), Flexitectura subcostata (SINZOV, 1892), F. tenuissima (SINZOV, 1892), and Squamitectura squamata (O. ANISTRATENKO, 2001). The type material of species introduced by W. FRIEDBERG (1928) is revised and lectotypes are designated for T. zboroviensis and T. incognita. The taxonomic status and position of this group of species is discussed. Data on palaeogeo- graphic and stratigraphic distribution, variability and the relationships of Middle Miocene Lottiidae GRAY, 1840 are presented.