Viruses 2015, 7, 456-479; doi:10.3390/v7020456 OPEN ACCESS viruses ISSN 1999-4915 www.mdpi.com/journal/viruses Article In Search of Pathogens: Transcriptome-Based Identification of Viral Sequences from the Pine Processionary Moth (Thaumetopoea pityocampa) Agata K. Jakubowska 1, Remziye Nalcacioglu 2, Anabel Millán-Leiva 3, Alejandro Sanz-Carbonell 1, Hacer Muratoglu 4, Salvador Herrero 1,* and Zihni Demirbag 2,* 1 Department of Genetics, Universitat de València, Dr Moliner 50, 46100 Burjassot, Spain; E-Mails:
[email protected] (A.K.J.);
[email protected] (A.S.-C.) 2 Department of Biology, Faculty of Sciences, Karadeniz Technical University, 61080 Trabzon, Turkey; E-Mail:
[email protected] 3 Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora” (IHSM-UMA-CSIC), Consejo Superior de Investigaciones Científicas, Estación Experimental “La Mayora”, Algarrobo-Costa, 29750 Málaga, Spain; E-Mail:
[email protected] 4 Department of Molecular Biology and Genetics, Faculty of Sciences, Karadeniz Technical University, 61080 Trabzon, Turkey; E-Mail:
[email protected] * Authors to whom correspondence should be addressed; E-Mails:
[email protected] (S.H.);
[email protected] (Z.D.); Tel.: +34-96-354-3006 (S.H.); +90-462-377-3320 (Z.D.); Fax: +34-96-354-3029 (S.H.); +90-462-325-3195 (Z.D.). Academic Editors: John Burand and Madoka Nakai Received: 29 November 2014 / Accepted: 13 January 2015 / Published: 23 January 2015 Abstract: Thaumetopoea pityocampa (pine processionary moth) is one of the most important pine pests in the forests of Mediterranean countries, Central Europe, the Middle East and North Africa. Apart from causing significant damage to pinewoods, T.