Siliceous Sporoderm of Hornworts: an Apomorphy Or a Plesiomorphy? Vladimir R
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Chapter 1-1 Introduction
Glime, J. M. 2017. Introduction. Chapt. 1. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. Ebook sponsored 1-1-1 by Michigan Technological University and the International Association of Bryologists. Last updated 25 April 2021 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 1-1 INTRODUCTION TABLE OF CONTENTS Thinking on a New Scale .................................................................................................................................... 1-1-2 Adaptations to Land ............................................................................................................................................ 1-1-3 Minimum Size..................................................................................................................................................... 1-1-5 Do Bryophytes Lack Diversity?.......................................................................................................................... 1-1-6 The "Moss".......................................................................................................................................................... 1-1-7 What's in a Name?............................................................................................................................................... 1-1-8 Phyla/Divisions............................................................................................................................................ 1-1-8 Role of Bryology................................................................................................................................................ -
Novelties in the Hornwort Flora of Croatia and Southeast Europe
cryptogamie Bryologie 2019 ● 40 ● 22 DIRECTEUR DE LA PUBLICATION : Bruno David, Président du Muséum national d’Histoire naturelle RÉDACTEURS EN CHEF / EDITORS-IN-CHIEF : Denis LAMY ASSISTANTS DE RÉDACTION / ASSISTANT EDITORS : Marianne SALAÜN ([email protected]) MISE EN PAGE / PAGE LAYOUT : Marianne SALAÜN RÉDACTEURS ASSOCIÉS / ASSOCIATE EDITORS Biologie moléculaire et phylogénie / Molecular biology and phylogeny Bernard GOFFINET Department of Ecology and Evolutionary Biology, University of Connecticut (United States) Mousses d’Europe / European mosses Isabel DRAPER Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid (Spain) Francisco LARA GARCÍA Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid (Spain) Mousses d’Afrique et d’Antarctique / African and Antarctic mosses Rysiek OCHYRA Laboratory of Bryology, Institute of Botany, Polish Academy of Sciences, Krakow (Pologne) Bryophytes d’Asie / Asian bryophytes Rui-Liang ZHU School of Life Science, East China Normal University, Shanghai (China) Bioindication / Biomonitoring Franck-Olivier DENAYER Faculté des Sciences Pharmaceutiques et Biologiques de Lille, Laboratoire de Botanique et de Cryptogamie, Lille (France) Écologie des bryophytes / Ecology of bryophyte Nagore GARCÍA MEDINA Department of Biology (Botany), and Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid (Spain) COUVERTURE / COVER : Extraits d’éléments de la Figure 2 / Extracts of -
The Chloroplast Rpl23 Gene Cluster of Spirogyra Maxima (Charophyceae) Shares Many Similarities with the Angiosperm Rpl23 Operon
Algae Volume 17(1): 59-68, 2002 The Chloroplast rpl23 Gene Cluster of Spirogyra maxima (Charophyceae) Shares Many Similarities with the Angiosperm rpl23 Operon Jungho Lee* and James R. Manhart Department of Biology, Texas A&M University, College Station, TX, 77843-3258, U.S.A. A phylogenetic affinity between charophytes and embryophytes (land plants) has been explained by a few chloro- plast genomic characters including gene and intron (Manhart and Palmer 1990; Baldauf et al. 1990; Lew and Manhart 1993). Here we show that a charophyte, Spirogyra maxima, has the largest operon of angiosperm chloroplast genomes, rpl23 operon (trnI-rpl23-rpl2-rps19-rpl22-rps3-rpl16-rpl14-rps8-infA-rpl36-rps11-rpoA) containing both embryophyte introns, rpl16.i and rpl2.i. The rpl23 gene cluster of Spirogyra contains a distinct eubacterial promoter sequence upstream of rpl23, which is the first gene of the green algal rpl23 gene cluster. This sequence is completely absent in angiosperms but is present in non-flowering plants. The results imply that, in the rpl23 gene cluster, early charophytes had at least two promoters, one upstream of trnI and another upstream of rpl23, which partially or completely lost its function in land plants. A comparison of gene clusters of prokaryotes, algal chloroplast DNAs and land plant cpDNAs indicated a loss of numerous genes in chlorophyll a+b eukaryotes. A phylogenetic analysis using presence/absence of genes and introns as characters produced trees with a strongly supported clade contain- ing chlorophyll a+b eukaryotes. Spirogyra and embryophytes formed a clade characterized by the loss of rpl5 and rps9 and the gain of trnI (CAU) and introns in rpl2 and rpl16. -
Phytotaxa, a Synthesis of Hornwort Diversity
Phytotaxa 9: 150–166 (2010) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2010 • Magnolia Press ISSN 1179-3163 (online edition) A synthesis of hornwort diversity: Patterns, causes and future work JUAN CARLOS VILLARREAL1 , D. CHRISTINE CARGILL2 , ANDERS HAGBORG3 , LARS SÖDERSTRÖM4 & KAREN SUE RENZAGLIA5 1Department of Ecology and Evolutionary Biology, University of Connecticut, 75 North Eagleville Road, Storrs, CT 06269; [email protected] 2Centre for Plant Biodiversity Research, Australian National Herbarium, Australian National Botanic Gardens, GPO Box 1777, Canberra. ACT 2601, Australia; [email protected] 3Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, IL 60605-2496; [email protected] 4Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway; [email protected] 5Department of Plant Biology, Southern Illinois University, Carbondale, IL 62901; [email protected] Abstract Hornworts are the least species-rich bryophyte group, with around 200–250 species worldwide. Despite their low species numbers, hornworts represent a key group for understanding the evolution of plant form because the best–sampled current phylogenies place them as sister to the tracheophytes. Despite their low taxonomic diversity, the group has not been monographed worldwide. There are few well-documented hornwort floras for temperate or tropical areas. Moreover, no species level phylogenies or population studies are available for hornworts. Here we aim at filling some important gaps in hornwort biology and biodiversity. We provide estimates of hornwort species richness worldwide, identifying centers of diversity. We also present two examples of the impact of recent work in elucidating the composition and circumscription of the genera Megaceros and Nothoceros. -
Xylans of Red and Green Algae: What Is Known About Their Structures and How They Are Synthesised?
polymers Review Xylans of Red and Green Algae: What Is Known about Their Structures and How They Are Synthesised? Yves S.Y. Hsieh 1,* and Philip J. Harris 2,* 1 Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, SE-106 91 Stockholm, Sweden 2 School of Biological Science, The University of Auckland, Private Bag 92019, Auckland, New Zealand * Correspondence: [email protected] (Y.S.Y.H.); [email protected] (P.J.H.); Tel.: +46-8-790-9937 (Y.S.Y.H.); +64-9-923-8366 (P.J.H.) Received: 30 January 2019; Accepted: 17 February 2019; Published: 18 February 2019 Abstract: Xylans with a variety of structures have been characterised in green algae, including chlorophytes (Chlorophyta) and charophytes (in the Streptophyta), and red algae (Rhodophyta). Substituted 1,4-β-D-xylans, similar to those in land plants (embryophytes), occur in the cell wall matrix of advanced orders of charophyte green algae. Small proportions of 1,4-β-D-xylans have also been found in the cell walls of some chlorophyte green algae and red algae but have not been well characterised. 1,3-β-D-Xylans occur as triple helices in microfibrils in the cell walls of chlorophyte algae in the order Bryopsidales and of red algae in the order Bangiales. 1,3;1,4-β-D-Xylans occur in the cell wall matrix of red algae in the orders Palmariales and Nemaliales. In the angiosperm Arabidopsis thaliana, the gene IRX10 encodes a xylan 1,4-β-D-xylosyltranferase (xylan synthase), and, when heterologously expressed, this protein catalysed the production of the backbone of 1,4-β-D-xylans. -
Plant Evolution an Introduction to the History of Life
Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular. -
Wildlife Review Cover Image: Hedgehog by Keith Kirk
Dumfries & Galloway Wildlife Review Cover Image: Hedgehog by Keith Kirk. Keith is a former Dumfries & Galloway Council ranger and now helps to run Nocturnal Wildlife Tours based in Castle Douglas. The tours use a specially prepared night tours vehicle, complete with external mounted thermal camera and internal viewing screens. Each participant also has their own state- of-the-art thermal imaging device to use for the duration of the tour. This allows participants to detect animals as small as rabbits at up to 300 metres away or get close enough to see Badgers and Roe Deer going about their nightly routine without them knowing you’re there. For further information visit www.wildlifetours.co.uk email [email protected] or telephone 07483 131791 Contributing photographers p2 Small White butterfly © Ian Findlay, p4 Colvend coast ©Mark Pollitt, p5 Bittersweet © northeastwildlife.co.uk, Wildflower grassland ©Mark Pollitt, p6 Oblong Woodsia planting © National Trust for Scotland, Oblong Woodsia © Chris Miles, p8 Birdwatching © castigatio/Shutterstock, p9 Hedgehog in grass © northeastwildlife.co.uk, Hedgehog in leaves © Mark Bridger/Shutterstock, Hedgehog dropping © northeastwildlife.co.uk, p10 Cetacean watch at Mull of Galloway © DGERC, p11 Common Carder Bee © Bob Fitzsimmons, p12 Black Grouse confrontation © Sergey Uryadnikov/Shutterstock, p13 Black Grouse male ©Sergey Uryadnikov/Shutterstock, Female Black Grouse in flight © northeastwildlife.co.uk, Common Pipistrelle bat © Steven Farhall/ Shutterstock, p14 White Ermine © Mark Pollitt, -
Anthocerotophyta
Glime, J. M. 2017. Anthocerotophyta. Chapt. 2-8. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. Ebook 2-8-1 sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 5 June 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 2-8 ANTHOCEROTOPHYTA TABLE OF CONTENTS Anthocerotophyta ......................................................................................................................................... 2-8-2 Summary .................................................................................................................................................... 2-8-10 Acknowledgments ...................................................................................................................................... 2-8-10 Literature Cited .......................................................................................................................................... 2-8-10 2-8-2 Chapter 2-8: Anthocerotophyta CHAPTER 2-8 ANTHOCEROTOPHYTA Figure 1. Notothylas orbicularis thallus with involucres. Photo by Michael Lüth, with permission. Anthocerotophyta These plants, once placed among the bryophytes in the families. The second class is Leiosporocerotopsida, a Anthocerotae, now generally placed in the phylum class with one order, one family, and one genus. The genus Anthocerotophyta (hornworts, Figure 1), seem more Leiosporoceros differs from members of the class distantly related, and genetic evidence may even present -
Checklist of the Liverworts and Hornworts of the Interior Highlands of North America in Arkansas, Illinois, Missouri and Oklahoma
Checklist of the Liverworts and Hornworts of the Interior Highlands of North America In Arkansas, Illinois, Missouri and Oklahoma Stephen L. Timme T. M. Sperry Herbarium ‐ Biology Pittsburg State University Pittsburg, Kansas 66762 and 3 Bowness Lane Bella Vista, AR 72714 [email protected] Paul Redfearn, Jr. 5238 Downey Ave. Independence, MO 64055 Introduction Since the last publication of a checklist of liverworts and hornworts of the Interior Highlands (1997)), many new county and state records have been reported. To make the checklist useful, it was necessary to update it since its last posting. The map of the Interior Highlands of North America that appears in Redfearn (1983) does not include the very southeast corner of Kansas. However, the Springfield Plateau encompasses some 88 square kilometers of this corner of the state and includes limestone and some sandstone and shale outcrops. The vegetation is typical Ozarkian flora, dominated by oak and hickory. This checklist includes liverworts and hornworts collected from Cherokee County, Kansas. Most of what is known for the area is the result of collections by R. McGregor published in 1955. The majority of his collections are deposited in the herbarium at the New York Botanical Garden (NY). This checklist only includes the region defined as the Interior Highlands of North America. This includes the Springfield Plateau, Salem Plateau, St. Francois Mountains, Boston Mountains, Arkansas Valley, Ouachita Mountains and Ozark Hills. It encompasses much of southern Missouri south of the Missouri River, southwest Illinois; most of Arkansas except the Mississippi Lowlands and the Coastal Plain, the extreme southeastern corner of Kansas, and eastern Oklahoma (Fig. -
JUDD W.S. Et. Al. (2002) Plant Systematics: a Phylogenetic Approach. Chapter 7. an Overview of Green
UNCORRECTED PAGE PROOFS An Overview of Green Plant Phylogeny he word plant is commonly used to refer to any auto- trophic eukaryotic organism capable of converting light energy into chemical energy via the process of photosynthe- sis. More specifically, these organisms produce carbohydrates from carbon dioxide and water in the presence of chlorophyll inside of organelles called chloroplasts. Sometimes the term plant is extended to include autotrophic prokaryotic forms, especially the (eu)bacterial lineage known as the cyanobacteria (or blue- green algae). Many traditional botany textbooks even include the fungi, which differ dramatically in being heterotrophic eukaryotic organisms that enzymatically break down living or dead organic material and then absorb the simpler products. Fungi appear to be more closely related to animals, another lineage of heterotrophs characterized by eating other organisms and digesting them inter- nally. In this chapter we first briefly discuss the origin and evolution of several separately evolved plant lineages, both to acquaint you with these important branches of the tree of life and to help put the green plant lineage in broad phylogenetic perspective. We then focus attention on the evolution of green plants, emphasizing sev- eral critical transitions. Specifically, we concentrate on the origins of land plants (embryophytes), of vascular plants (tracheophytes), of 1 UNCORRECTED PAGE PROOFS 2 CHAPTER SEVEN seed plants (spermatophytes), and of flowering plants dons.” In some cases it is possible to abandon such (angiosperms). names entirely, but in others it is tempting to retain Although knowledge of fossil plants is critical to a them, either as common names for certain forms of orga- deep understanding of each of these shifts and some key nization (e.g., the “bryophytic” life cycle), or to refer to a fossils are mentioned, much of our discussion focuses on clade (e.g., applying “gymnosperms” to a hypothesized extant groups. -
About the Book the Format Acknowledgments
About the Book For more than ten years I have been working on a book on bryophyte ecology and was joined by Heinjo During, who has been very helpful in critiquing multiple versions of the chapters. But as the book progressed, the field of bryophyte ecology progressed faster. No chapter ever seemed to stay finished, hence the decision to publish online. Furthermore, rather than being a textbook, it is evolving into an encyclopedia that would be at least three volumes. Having reached the age when I could retire whenever I wanted to, I no longer needed be so concerned with the publish or perish paradigm. In keeping with the sharing nature of bryologists, and the need to educate the non-bryologists about the nature and role of bryophytes in the ecosystem, it seemed my personal goals could best be accomplished by publishing online. This has several advantages for me. I can choose the format I want, I can include lots of color images, and I can post chapters or parts of chapters as I complete them and update later if I find it important. Throughout the book I have posed questions. I have even attempt to offer hypotheses for many of these. It is my hope that these questions and hypotheses will inspire students of all ages to attempt to answer these. Some are simple and could even be done by elementary school children. Others are suitable for undergraduate projects. And some will take lifelong work or a large team of researchers around the world. Have fun with them! The Format The decision to publish Bryophyte Ecology as an ebook occurred after I had a publisher, and I am sure I have not thought of all the complexities of publishing as I complete things, rather than in the order of the planned organization. -
Hornwort Pyrenoids, Carbon-Concentrating Structures, Evolved and Were Lost at Least five Times During the Last 100 Million Years
Hornwort pyrenoids, carbon-concentrating structures, evolved and were lost at least five times during the last 100 million years Juan Carlos Villarreal1 and Susanne S. Renner Systematic Botany and Mycology, Department of Biology, University of Munich (LMU), Munich 80638, Germany Edited by John Raven, University of Dundee, Dundee, United Kingdom, and accepted by the Editorial Board September 24, 2012 (received for review August 7, 2012) Ribulose-1,5-Biphosphate-carboxylase-oxygenase (RuBisCO) has a have a stacked arrangement of thylakoid membranes (grana) that crucial role in carbon fixation but a slow catalytic rate, a problem results in the spatial separation of photosystems and increases the overcome in some plant lineages by physiological and anatomical efficiency of light capture in terrestrial environments (13). Horn- traits that elevate carbon concentrations around the enzyme. Such wort grana consist of stacks of short thylakoids and lack end carbon-concentrating mechanisms are hypothesized to have evolved membranes. Therefore, unlike other land plants, hornwort grana during periods of low atmospheric CO2. Hornworts, the sister to are devoid of the membrane “sacs” that enclose intrathylakoid vascular plants, have a carbon-concentrating mechanism that relies spaces. Presumably, the perpendicular channel thylakoid system in on pyrenoids, proteinaceous bodies mostly consisting of RuBisCO. hornwort plastids serves to isolate biochemical processes (13). We generated a phylogeny based on mitochondrial and plastid Organic isotope discrimination supports a function in CO2 sequences for 36% of the approximately 200 hornwort species to concentration for hornwort pyrenoids (14–18). Mass spectrometry infer the history of gains and losses of pyrenoids in this clade; we analyses show that hornworts with pyrenoids (e.g., Phaeoceros and also used fossils and multiple dating approaches to generate a chro- Notothylas) have lower compensation points (11–13 vs.