Randomization in Clinical Trials: Can We Eliminate Bias?
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Adaptive Clinical Trials: an Introduction
Adaptive clinical trials: an introduction What are the advantages and disadvantages of adaptive clinical trial designs? How and why were Introduction adaptive clinical Adaptive clinical trial design is trials developed? becoming a hot topic in healthcare research, with some researchers In 2004, the FDA published a report arguing that adaptive trials have the on the problems faced by the potential to get new drugs to market scientific community in developing quicker. In this article, we explain new medical treatments.2 The what adaptive trials are and why they report highlighted that the pace of were developed, and we explore both innovation in biomedical science is the advantages of adaptive designs outstripping the rate of advances and the concerns being raised by in the available technologies and some in the healthcare community. tools for evaluating new treatments. Outdated tools are being used to assess new treatments and there What are adaptive is a critical need to improve the effectiveness and efficiency of clinical trials? clinical trials.2 The current process for developing Adaptive clinical trials enable new treatments is expensive, takes researchers to change an aspect a long time and in some cases, the of a trial design at an interim development process has to be assessment, while controlling stopped after significant amounts the rate of type 1 errors.1 Interim of time and resources have been assessments can help to determine invested.2 In 2006, the FDA published whether a trial design is the most a “Critical Path Opportunities -
How Many Stratification Factors Is Too Many" to Use in a Randomization
How many Strati cation Factors is \Too Many" to Use in a Randomization Plan? Terry M. Therneau, PhD Abstract The issue of strati cation and its role in patient assignment has gen- erated much discussion, mostly fo cused on its imp ortance to a study [1,2] or lack thereof [3,4]. This rep ort fo cuses on a much narrower prob- lem: assuming that strati ed assignment is desired, how many factors can b e accomo dated? This is investigated for two metho ds of balanced patient assignment, the rst is based on the minimization metho d of Taves [5] and the second on the commonly used metho d of strati ed assignment [6,7]. Simulation results show that the former metho d can accomo date a large number of factors 10-20 without diculty, but that the latter b egins to fail if the total numb er of distinct combinations of factor levels is greater than approximately n=2. The two metho ds are related to a linear discriminant mo del, which helps to explain the results. 1 1 Intro duction This work arose out of my involvement with lung cancer studies within the North Central Cancer Treatment Group. These studies are small, typically 100 to 200 patients, and there are several imp ortant prognostic factors on whichwe wish to balance. Some of the factors, such as p erformance or Karnofsky score, are likely to contribute a larger survival impact than the treatment under study; hazards ratios of 3{4 are not uncommon. In this setting it b ecomes very dicult to interpret study results if any of the factors are signi cantly out of balance. -
Harmonizing Fully Optimal Designs with Classic Randomization in Fixed Trial Experiments Arxiv:1810.08389V1 [Stat.ME] 19 Oct 20
Harmonizing Fully Optimal Designs with Classic Randomization in Fixed Trial Experiments Adam Kapelner, Department of Mathematics, Queens College, CUNY, Abba M. Krieger, Department of Statistics, The Wharton School of the University of Pennsylvania, Uri Shalit and David Azriel Faculty of Industrial Engineering and Management, The Technion October 22, 2018 Abstract There is a movement in design of experiments away from the classic randomization put forward by Fisher, Cochran and others to one based on optimization. In fixed-sample trials comparing two groups, measurements of subjects are known in advance and subjects can be divided optimally into two groups based on a criterion of homogeneity or \imbalance" between the two groups. These designs are far from random. This paper seeks to understand the benefits and the costs over classic randomization in the context of different performance criterions such as Efron's worst-case analysis. In the criterion that we motivate, randomization beats optimization. However, the optimal arXiv:1810.08389v1 [stat.ME] 19 Oct 2018 design is shown to lie between these two extremes. Much-needed further work will provide a procedure to find this optimal designs in different scenarios in practice. Until then, it is best to randomize. Keywords: randomization, experimental design, optimization, restricted randomization 1 1 Introduction In this short survey, we wish to investigate performance differences between completely random experimental designs and non-random designs that optimize for observed covariate imbalance. We demonstrate that depending on how we wish to evaluate our estimator, the optimal strategy will change. We motivate a performance criterion that when applied, does not crown either as the better choice, but a design that is a harmony between the two of them. -
Some Restricted Randomization Rules in Sequential Designs Jose F
This article was downloaded by: [Georgia Tech Library] On: 10 April 2013, At: 12:48 Publisher: Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: Mortimer House, 37-41 Mortimer Street, London W1T 3JH, UK Communications in Statistics - Theory and Methods Publication details, including instructions for authors and subscription information: http://www.tandfonline.com/loi/lsta20 Some Restricted randomization rules in sequential designs Jose F. Soares a & C.F. Jeff Wu b a Federal University of Minas Gerais, Brazil b University of Wisconsin Madison and Mathematical Sciences Research Institute, Berkeley Version of record first published: 27 Jun 2007. To cite this article: Jose F. Soares & C.F. Jeff Wu (1983): Some Restricted randomization rules in sequential designs, Communications in Statistics - Theory and Methods, 12:17, 2017-2034 To link to this article: http://dx.doi.org/10.1080/03610928308828586 PLEASE SCROLL DOWN FOR ARTICLE Full terms and conditions of use: http://www.tandfonline.com/page/terms-and-conditions This article may be used for research, teaching, and private study purposes. Any substantial or systematic reproduction, redistribution, reselling, loan, sub-licensing, systematic supply, or distribution in any form to anyone is expressly forbidden. The publisher does not give any warranty express or implied or make any representation that the contents will be complete or accurate or up to date. The accuracy of any instructions, formulae, and drug doses should be independently verified with primary sources. The publisher shall not be liable for any loss, actions, claims, proceedings, demand, or costs or damages whatsoever or howsoever caused arising directly or indirectly in connection with or arising out of the use of this material. -
Stratification Trees for Adaptive Randomization in Randomized
Stratification Trees for Adaptive Randomization in Randomized Controlled Trials Max Tabord-Meehan Department of Economics Northwestern University [email protected] ⇤ (Click here for most recent version) 26th October 2018 Abstract This paper proposes an adaptive randomization procedure for two-stage randomized con- trolled trials. The method uses data from a first-wave experiment in order to determine how to stratify in a second wave of the experiment, where the objective is to minimize the variance of an estimator for the average treatment e↵ect (ATE). We consider selection from a class of stratified randomization procedures which we call stratification trees: these are procedures whose strata can be represented as decision trees, with di↵ering treatment assignment probabilities across strata. By using the first wave to estimate a stratification tree, we simultaneously select which covariates to use for stratification, how to stratify over these covariates, as well as the assign- ment probabilities within these strata. Our main result shows that using this randomization procedure with an appropriate estimator results in an asymptotic variance which minimizes the variance bound for estimating the ATE, over an optimal stratification of the covariate space. Moreover, by extending techniques developed in Bugni et al. (2018), the results we present are able to accommodate a large class of assignment mechanisms within strata, including stratified block randomization. We also present extensions of the procedure to the setting of multiple treatments, and to the targeting of subgroup-specific e↵ects. In a simulation study, we find that our method is most e↵ective when the response model exhibits some amount of “sparsity” with respect to the covariates, but can be e↵ective in other contexts as well, as long as the first-wave sample size used to estimate the stratification tree is not prohibitively small. -
Pragmatic Cluster Randomized Trials Using Covariate Constrained Randomization: a Method for Practice-Based Research Networks (Pbrns)
SPECIAL COMMUNICATION Pragmatic Cluster Randomized Trials Using Covariate Constrained Randomization: A Method for Practice-based Research Networks (PBRNs) L. Miriam Dickinson, PhD, Brenda Beaty, MSPH, Chet Fox, MD, Wilson Pace, MD, W. Perry Dickinson, MD, Caroline Emsermann, MS, and Allison Kempe, MD, MPH Background: Cluster randomized trials (CRTs) are useful in practice-based research network transla- tional research. However, simple or stratified randomization often yields study groups that differ on key baseline variables when the number of clusters is small. Unbalanced study arms constitute a potentially serious methodological problem for CRTs. Methods: Covariate constrained randomization with data on relevant variables before randomization was used to achieve balanced study arms in 2 pragmatic CRTs. In study 1, 16 counties in Colorado were randomized to practice-based or population-based reminder recall for vaccinating children ages 19 to 35 months. In study 2, 18 primary care practices were randomized to computer decision support plus practice facilitation versus computer decision support alone to improve care for patients with stage 3 and 4 chronic kidney disease. For each study, a set of optimal randomizations, which minimized differ- ences of key variables between study arms, was identified from the set of all possible randomizations. Results: Differences between study arms were smaller in the optimal versus remaining randomiza- tions. Even for the randomization in the optimal set with the largest difference between groups, study arms did not differ significantly on any variable for either study (P > .05). Conclusions: Covariate constrained randomization, which restricts the full randomization set to a subset in which differences between study arms are minimized, is a useful tool for achieving balanced study arms in CRTs. -
Random Allocation in Controlled Clinical Trials: a Review
J Pharm Pharm Sci (www.cspsCanada.org) 17(2) 248 - 253, 2014 Random Allocation in Controlled Clinical Trials: A Review Bolaji Emmanuel Egbewale Department of Community Medicine, Ladoke Akintola University of Technology, Ogbomoso, Nigeria Received, February 16, 2014; Revised, May 23, 2014; Accepted, May 30, 2014; Published, June 2, 2014. ABSTRACT- PURPOSE: An allocation strategy that allows for chance placement of participants to study groups is crucial to the experimental nature of randomised controlled trials. Following decades of the discovery of randomisation considerable erroneous opinion and misrepresentations of its concept both in principle and practice still exists. In some circles, opinions are also divided on the strength and weaknesses of each of the random allocation strategies. This review provides an update on various random allocation techniques so as to correct existing misconceptions on this all important procedure. METHODS: This is a review of literatures published in the Pubmed database on concepts of common allocation techniques used in controlled clinical trials. RESULTS: Allocation methods that use; case record number, date of birth, date of presentation, haphazard or alternating assignment are non-random allocation techniques and should not be confused as random methods. Four main random allocation techniques were identified. Minimisation procedure though not fully a random technique, however, proffers solution to the limitations of stratification at balancing for multiple prognostic factors, as the procedure makes treatment groups similar in several important features even in small sample trials. CONCLUSIONS: Even though generation of allocation sequence by simple randomisation procedure is easily facilitated, a major drawback of the technique is that treatment groups can by chance end up being dissimilar both in size and composition of prognostic factors. -
In Pursuit of Balance
WPS4752 POLICY RESEA R CH WO R KING PA P E R 4752 Public Disclosure Authorized In Pursuit of Balance Randomization in Practice Public Disclosure Authorized in Development Field Experiments Miriam Bruhn David McKenzie Public Disclosure Authorized The World Bank Public Disclosure Authorized Development Research Group Finance and Private Sector Team October 2008 POLICY RESEA R CH WO R KING PA P E R 4752 Abstract Randomized experiments are increasingly used in emerge. First, many researchers are not controlling for the development economics, with researchers now facing method of randomization in their analysis. The authors the question of not just whether to randomize, but show this leads to tests with incorrect size, and can result how to do so. Pure random assignment guarantees that in lower power than if a pure random draw was used. the treatment and control groups will have identical Second, they find that in samples of 300 or more, the characteristics on average, but in any particular random different randomization methods perform similarly in allocation, the two groups will differ along some terms of achieving balance on many future outcomes of dimensions. Methods used to pursue greater balance interest. However, for very persistent outcome variables include stratification, pair-wise matching, and re- and in smaller sample sizes, pair-wise matching and randomization. This paper presents new evidence on stratification perform best. Third, the analysis suggests the randomization methods used in existing randomized that on balance the re-randomization methods common experiments, and carries out simulations in order to in practice are less desirable than other methods, such as provide guidance for researchers. -
Adaptive Designs in Clinical Trials: Why Use Them, and How to Run and Report Them Philip Pallmann1* , Alun W
Pallmann et al. BMC Medicine (2018) 16:29 https://doi.org/10.1186/s12916-018-1017-7 CORRESPONDENCE Open Access Adaptive designs in clinical trials: why use them, and how to run and report them Philip Pallmann1* , Alun W. Bedding2, Babak Choodari-Oskooei3, Munyaradzi Dimairo4,LauraFlight5, Lisa V. Hampson1,6, Jane Holmes7, Adrian P. Mander8, Lang’o Odondi7, Matthew R. Sydes3,SofíaS.Villar8, James M. S. Wason8,9, Christopher J. Weir10, Graham M. Wheeler8,11, Christina Yap12 and Thomas Jaki1 Abstract Adaptive designs can make clinical trials more flexible by utilising results accumulating in the trial to modify the trial’s course in accordance with pre-specified rules. Trials with an adaptive design are often more efficient, informative and ethical than trials with a traditional fixed design since they often make better use of resources such as time and money, and might require fewer participants. Adaptive designs can be applied across all phases of clinical research, from early-phase dose escalation to confirmatory trials. The pace of the uptake of adaptive designs in clinical research, however, has remained well behind that of the statistical literature introducing new methods and highlighting their potential advantages. We speculate that one factor contributing to this is that the full range of adaptations available to trial designs, as well as their goals, advantages and limitations, remains unfamiliar to many parts of the clinical community. Additionally, the term adaptive design has been misleadingly used as an all-encompassing label to refer to certain methods that could be deemed controversial or that have been inadequately implemented. We believe that even if the planning and analysis of a trial is undertaken by an expert statistician, it is essential that the investigators understand the implications of using an adaptive design, for example, what the practical challenges are, what can (and cannot) be inferred from the results of such a trial, and how to report and communicate the results. -
Adaptive Design: a Review of the Technical, Statistical, and Regulatory Aspects of Implementation in a Clinical Trial
Adaptive Design: A Review of the Technical, Statistical, and Regulatory Aspects of Implementation in a Clinical Trial 1,2 1 Franck Pires Cerqueira, MSc , Angelo Miguel Cardoso Jesus, PhD , and Maria Dulce 2 Cotrim, PhD 1 Polytechnic Institute of Porto School of Health, Department of Pharmacy Porto, Portugal 2 Pharmacy Faculty of the University of Coimbra, Department of Pharmacology Coimbra, Portugal Abstract Background: In an adaptive trial, the researcher may have the option of responding to interim safety and efficacy data in a number of ways, including narrowing the study focus or increasing the number of subjects, balancing treatment allocation or different forms of randomization based on responses of subjects prior to treatment. This research aims at compiling the technical, statistical, and regulatory implications of the employment of adaptive design in a clinical trial. Methods: Review of adaptive design clinical trials in Medline, PubMed, EU Clinical Trials Register, and ClinicalTrials.gov. Phase I and seamless phase I/II trials were excluded. We selected variables extracted from trials that included basic study characteristics, adaptive design features, size and use of inde- pendent data-monitoring committees (DMCs), and blinded interim analysis. Results: The research retrieved 336 results, from which 78 were selected for analysis. Sixty-seven were published articles, and 11 were guidelines, papers, and regulatory bills. The most prevalent type of adaptation was the seamless phase II/III design 23.1%, followed by adaptive dose progression 19.2%, pick the winner / drop the loser 16.7%, sample size re-estimation 10.3%, change in the study objective 9.0%, adaptive sequential design 9.0%, adaptive randomization 6.4%, biomarker adaptive design 3.8%, and endpoint adaptation 2.6%. -
Week 10: Causality with Measured Confounding
Week 10: Causality with Measured Confounding Brandon Stewart1 Princeton November 28 and 30, 2016 1These slides are heavily influenced by Matt Blackwell, Jens Hainmueller, Erin Hartman, Kosuke Imai and Gary King. Stewart (Princeton) Week 10: Measured Confounding November 28 and 30, 2016 1 / 176 Where We've Been and Where We're Going... Last Week I regression diagnostics This Week I Monday: F experimental Ideal F identification with measured confounding I Wednesday: F regression estimation Next Week I identification with unmeasured confounding I instrumental variables Long Run I causality with measured confounding ! unmeasured confounding ! repeated data Questions? Stewart (Princeton) Week 10: Measured Confounding November 28 and 30, 2016 2 / 176 1 The Experimental Ideal 2 Assumption of No Unmeasured Confounding 3 Fun With Censorship 4 Regression Estimators 5 Agnostic Regression 6 Regression and Causality 7 Regression Under Heterogeneous Effects 8 Fun with Visualization, Replication and the NYT 9 Appendix Subclassification Identification under Random Assignment Estimation Under Random Assignment Blocking Stewart (Princeton) Week 10: Measured Confounding November 28 and 30, 2016 3 / 176 Lancet 2001: negative correlation between coronary heart disease mortality and level of vitamin C in bloodstream (controlling for age, gender, blood pressure, diabetes, and smoking) Stewart (Princeton) Week 10: Measured Confounding November 28 and 30, 2016 4 / 176 Lancet 2002: no effect of vitamin C on mortality in controlled placebo trial (controlling for nothing) Stewart (Princeton) Week 10: Measured Confounding November 28 and 30, 2016 4 / 176 Lancet 2003: comparing among individuals with the same age, gender, blood pressure, diabetes, and smoking, those with higher vitamin C levels have lower levels of obesity, lower levels of alcohol consumption, are less likely to grow up in working class, etc. -
Randomized Complete Block Designs
1 2 RANDOMIZED COMPLETE BLOCK DESIGNS Randomization can in principal be used to take into account factors that can be treated by blocking, but Introduction to Blocking blocking usually results in smaller error variance, hence better estimates of effect. Thus blocking is Nuisance factor: A factor that probably has an effect sometimes referred to as a method of variance on the response, but is not a factor that we are reduction design. interested in. The intuitive idea: Run in parallel a bunch of Types of nuisance factors and how to deal with them experiments on groups (called blocks) of units that in designing an experiment: are fairly similar. Characteristics Examples How to treat The simplest block design: The randomized complete Unknown, Experimenter or Randomization block design (RCBD) uncontrollable subject bias, order Blinding of treatments v treatments Known, IQ, weight, Analysis of (They could be treatment combinations.) uncontrollable, previous learning, Covariance measurable temperature b blocks, each with v units Known, Temperature, Blocking Blocks chosen so that units within a block are moderately location, time, alike (or at least similar) and units in controllable (by batch, particular different blocks are substantially different. choosing rather machine or (Thus the total number of experimental units than adjusting) operator, age, is n = bv.) gender, order, IQ, weight The v experimental units within each block are randomly assigned to the v treatments. (So each treatment is assigned one unit per block.) 3 4 Note that experimental units are assigned randomly RCBD Model: only within each block, not overall. Thus this is sometimes called a restricted randomization.