A peer-reviewed open-access journal Subterranean Biology 39: 79–105 (2021) doi: 10.3897/subtbiol.39.64279 RESEARCH ARTICLE Subterranean Published by https://subtbiol.pensoft.net The International Society Biology for Subterranean Biology Refining sampling protocols for cavefishes and cave crayfishes to account for environmental variation Joshua B. Mouser1, Shannon K. Brewer2,5, Matthew L. Niemiller3, Robert Mollenhauer1, Ronald A. Van Den Bussche4 1 Oklahoma Cooperative Fish and Wildlife Research Unit, Oklahoma State University, 007 Agriculture Hall, Stillwater, Oklahoma 74078, USA 2 U.S. Geological Survey, Oklahoma Cooperative Fish and Wildlife Re- search Unit, Oklahoma State University, 007 Agriculture Hall, Stillwater, Oklahoma 74078, USA 3 Depart- ment of Biological Sciences, The University of Alabama in Huntsville, 301 Sparkman Drive NW, Huntsville, Alabama 35899, USA 4 Oklahoma State University, 203 Whitehurst, Stillwater, Oklahoma 74078, USA 5 Current address: U.S. Geological Survey, Alabama Cooperative Fish and Wildlife Research Unit, 319 Swingle Hall, Auburn University, Auburn, AL 36849, USA Corresponding author: Shannon K. Brewer (
[email protected]) Academic editor: Maria E. Bichuette | Received 11 February 2021 | Accepted 15 May 2021 | Published 9 June 2021 http://zoobank.org/D2ACEF0F-6206-49AC-B8D4-5BE86E48D762 Citation: Mouser JB, Brewer SK, Niemiller ML, Mollenhauer R, Van Den Bussche RA (2021) Refining sampling protocols for cavefishes and cave crayfishes to account for environmental variation. Subterranean Biology 39: 79–105. https://doi.org/10.3897/subtbiol.39.64279 Abstract Subterranean habitats represent focal habitats in many conservation strategies; however, these environ- ments are some of the most difficult to sample. New sampling methods, such as environmental DNA (eDNA), show promise to improve stygobiont detection, but sources of sampling bias are poorly under- stood.