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Phylogeography of Finches and Sparrows
In: Animal Genetics ISBN: 978-1-60741-844-3 Editor: Leopold J. Rechi © 2009 Nova Science Publishers, Inc. Chapter 1 PHYLOGEOGRAPHY OF FINCHES AND SPARROWS Antonio Arnaiz-Villena*, Pablo Gomez-Prieto and Valentin Ruiz-del-Valle Department of Immunology, University Complutense, The Madrid Regional Blood Center, Madrid, Spain. ABSTRACT Fringillidae finches form a subfamily of songbirds (Passeriformes), which are presently distributed around the world. This subfamily includes canaries, goldfinches, greenfinches, rosefinches, and grosbeaks, among others. Molecular phylogenies obtained with mitochondrial DNA sequences show that these groups of finches are put together, but with some polytomies that have apparently evolved or radiated in parallel. The time of appearance on Earth of all studied groups is suggested to start after Middle Miocene Epoch, around 10 million years ago. Greenfinches (genus Carduelis) may have originated at Eurasian desert margins coming from Rhodopechys obsoleta (dessert finch) or an extinct pale plumage ancestor; it later acquired green plumage suitable for the greenfinch ecological niche, i.e.: woods. Multicolored Eurasian goldfinch (Carduelis carduelis) has a genetic extant ancestor, the green-feathered Carduelis citrinella (citril finch); this was thought to be a canary on phonotypical bases, but it is now included within goldfinches by our molecular genetics phylograms. Speciation events between citril finch and Eurasian goldfinch are related with the Mediterranean Messinian salinity crisis (5 million years ago). Linurgus olivaceus (oriole finch) is presently thriving in Equatorial Africa and was included in a separate genus (Linurgus) by itself on phenotypical bases. Our phylograms demonstrate that it is and old canary. Proposed genus Acanthis does not exist. Twite and linnet form a separate radiation from redpolls. -
The Phylogenetic Relationships and Generic Limits of Finches
Molecular Phylogenetics and Evolution 62 (2012) 581–596 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev The phylogenetic relationships and generic limits of finches (Fringillidae) ⇑ Dario Zuccon a, , Robert Pryˆs-Jones b, Pamela C. Rasmussen c, Per G.P. Ericson d a Molecular Systematics Laboratory, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden b Bird Group, Department of Zoology, Natural History Museum, Akeman St., Tring, Herts HP23 6AP, UK c Department of Zoology and MSU Museum, Michigan State University, East Lansing, MI 48824, USA d Department of Vertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden article info abstract Article history: Phylogenetic relationships among the true finches (Fringillidae) have been confounded by the recurrence Received 30 June 2011 of similar plumage patterns and use of similar feeding niches. Using a dense taxon sampling and a com- Revised 27 September 2011 bination of nuclear and mitochondrial sequences we reconstructed a well resolved and strongly sup- Accepted 3 October 2011 ported phylogenetic hypothesis for this family. We identified three well supported, subfamily level Available online 17 October 2011 clades: the Holoarctic genus Fringilla (subfamly Fringillinae), the Neotropical Euphonia and Chlorophonia (subfamily Euphoniinae), and the more widespread subfamily Carduelinae for the remaining taxa. Keywords: Although usually separated in a different -
Eurasian Siskins in North America Distinguishing Females from Green
Reprinted from: American Birds, Winter 1989, Volume 43, Number 5 Printed in U.S. A. Eurasian Siskins in North America distinguishing females from green-morph Pine Siskins Ian A. McLaren, Joseph Morlan, P. William Smith, Michel Gosselin, and Stephen F. Bailey Figure 1. Dorsal view of the green-morph Pine Siskin in Halifax, Nova Scotia. early April 1986. Photo/!. McLaren. N MARCH 26,1986, AN UNUSUAL were clearly Pine Siskins in other at- suggested that it was probably a Pine siskin turned up at McLaren's tributes, and they were not widely re- Siskin because of its bright yellow un- O feeder in Halifax, Nova Scotia. ported. The original Halifax bird dertail coverts, a feature lacking in It was dark grayish-green on the back, (Figs. 1, 2) required more research Eurasian Siskins (With~rby et at. with strong yellow wing and tail before finally being identified as an 1943). The photographs show that the patches, a greenish-yellow rump, and example of the little-known green bird was definitely a green-morph tinged with yellow on the head and morph of the Pine Siskin. Pine Siskin, based on this and other underparts. Furthermore, it appeared Meanwhile, in late February 1987 characters discussed below. smaller and its bill seemed deeper an unusual siskin flew into a window Our purpose~ in writing this ac- than average among scores of Pine ofe. J. Ralph's house in Arcata, Cal- count are to review available infor- Siskins (Carduelis pinus) coming to ifornia. The bird was stunned briefly, mation on claimed occurrences of the the feeder. -
Peter Marler Correspondence D-483
http://oac.cdlib.org/findaid/ark:/13030/c88k7ddv No online items Inventory of the Peter Marler Correspondence D-483 University of California, Davis Library, Dept. of Special Collections 1st Floor, Shields Library, University of California 100 North West Quad Davis, CA 95616-5292 [email protected] URL: https://www.library.ucdavis.edu/archives-and-special-collections Inventory of the Peter Marler D-483 1 Correspondence D-483 Language of Material: English Contributing Institution: University of California, Davis Library, Dept. of Special Collections Title: Peter Marler Correspondence Creator: Marler, Peter. Identifier/Call Number: D-483 Physical Description: 20 linear feet Date (inclusive): 1960-2008 Abstract: Correspondence relating to Professor of Neurobiology, Physiology, and Behavior Peter Marler's research on animal communication and his involvement with professional organizations. Researchers should contact Archives and Special Collections to request collections, as many are stored offsite. Biography Professor of Neurobiology, Physiology, and Behavior, University of California, Davis (1989-1994). Scope and Contents Correspondence relating to Marler's research on animal communication and his involvement with professional organizations. Access Collection is open for research. Processing Information Liz Phillips encoded this finding aid with help from student assistant Aditi Sinha. Preferred Citation [Identification of item], Peter Marler correspondence, D-483, Archives and Special Collections, UC Davis Library, University of California, Davis. Publication Rights All applicable copyrights for the collection are protected under chapter 17 of the U.S. Copyright Code. Requests for permission to publish or quote from manuscripts must be submitted in writing to the Head of Special Collections. Permission for publication is given on behalf of the Regents of the University of California as the owner of the physical items. -
Japan in Winter January 13–25, 2018
JAPAN IN WINTER JANUARY 13–25, 2018 Japanese (Red-crowned) Cranes dancing. Photo: S. Hilty LEADERS: KAZ SHINODA & STEVE HILTY with KOJI NIIYA one morning on HOKKAIDO LIST COMPILED BY: STEVE HILTY VICTOR EMANUEL NATURE TOURS, INC. 2525 WALLINGWOOD DRIVE, SUITE 1003 AUSTIN, TEXAS 78746 WWW.VENTBIRD.COM JAPAN IN WINTER: A CRANE & SEA-EAGLE SPECTACLE! By Steve Hilty One of the top highlights mentioned by most members of the group was a Ural Owl sleeping in a large, picturesque tree hollow. It was, in fact, an image that could have been plucked straight from an illustrated book of fairy tales from the Middle Ages. A male Eurasian Bullfinch in beautiful morning light also garnered top honors and, surprisingly, so did the diminutive Japanese Pygmy Woodpecker. For several of us, a large flock of Rooks eluding repeated prey- capture attempts by a Peregrine Falcon (the Rooks being more capable and wily than they might appear) over a large expanse of rice paddies was a trip highlight. Also prized were more than a dozen Stellar’s and White-tailed sea-eagles perched on a forested Hokkaido hillside during a snowstorm. The arrival of a Blakiston’s Fish-Owl at a small pool resulted in a mass exodus from our rather sedate and stylized Japanese dinner. And yes, then there were the Japanese Cranes, lumps of black and white fluff standing in a frigid river as steamy mists from the thermally- heated river water rose around them—a surreal and unforgettable setting. Surprisingly, perhaps, the Mandarin Ducks received not a single nod at the end—perhaps because they were a little distant—although they generated much excitement the morning we saw them, and the image of a stately pair cruising steadily across a mirror-smooth lake in early morning light, their narrow wake line trailing behind, will not likely be forgotten. -
Sequence and Organisation of the Mitochondrial Genome of Japanese Grosbeak (Eophona Personata), and the Phylogenetic Relationships of Fringillidae
ZooKeys 955: 67–80 (2020) A peer-reviewed open-access journal doi: 10.3897/zookeys.955.34432 RESEARCH ARTICLE https://zookeys.pensoft.net Launched to accelerate biodiversity research Sequence and organisation of the mitochondrial genome of Japanese Grosbeak (Eophona personata), and the phylogenetic relationships of Fringillidae Guolei Sun1, Chao Zhao1, Tian Xia1, Qinguo Wei1, Xiufeng Yang1, Shi Feng1, Weilai Sha1, Honghai Zhang1 1 College of Life Science, Qufu Normal University, Qufu, Shandong province, China Corresponding author: Honghai Zhang ([email protected]) Academic editor: G. Sangster | Received 12 March 2019 | Accepted 7 October 2020 | Published 18 November 2020 http://zoobank.org/C3518FBE-06B2-4CAA-AFBF-13EB96B3E1E9 Citation: Sun G, Zhao C, Xia T, Wei Q, Yang X, Feng S, Sha W, Zhang H (2020) Sequence and organisation of the mitochondrial genome of Japanese Grosbeak (Eophona personata), and the phylogenetic relationships of Fringillidae. ZooKeys 955: 67–80. https://doi.org/10.3897/zookeys.955.34432 Abstract Mitochondrial DNA is a useful molecular marker for phylogenetic and evolutionary analysis. In the current study, we determined the complete mitochondrial genome of Eophona personata, the Japanese Grosbeak, and the phylogenetic relationships of E. personata and 16 other species of the family Fringil- lidae based on the sequences of 12 mitochondrial protein-coding genes. The mitochondrial genome of E. personata consists of 16,771 base pairs, and contains 13 protein-coding genes, 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes, and one control region. Analysis of the base composition revealed an A+T bias, a positive AT skew and a negative GC skew. The mitochondrial gene order and arrangement in E. -
Winter Birds in the Land of the Rising Sun Japan Is a Huge Archipelago Stretching Along the Northern Pacific Ocean
Japan Winter birds in the Land of the Rising Sun Japan is a huge archipelago stretching along the northern Pacific Ocean. Our tour concentrates on Kyushu, Hokkaido, Katano on the Sea of Japan and Karuizawa in the Japanese Alps. This winter tour to Japan should produce many memorable highlights in a country steeped in its own tradition and culture. Interesting species present in winter include Short-tailed Albatross, White-naped and Hooded Cranes, Baikal Teal, Blakiston’s Fish Owl and impressive concentrations of Steller’s and White-tailed Eagles. This is the most comprehensive Japanese winter tour available today taking in a wide-range of habitats and sites. Birdwatching Breaks has been running tours to Japan since 1996, totalling 24 to date. Mark Finn has an extensive knowledge and experience of Japan’s unique birdlife and where to find it. Over the years, Birdwatching Breaks has built up trust with local Japanese birdwatchers, making the company one of the market leaders to this wonderful country. ■ The following itinerary is sometimes subject to change due to ferry schedules from Nagoya. Days 1-2: We fly to Tokyo, arriving on the morning of Day 2. On arrival, we travel to Dates Tokyo station and take the bullet train to Tour A: Friday February 5th – Karuizawa for a two-night stay. Karuizawa Saturday February 20th 2021 is a picturesque town situated in the Tour B: Friday February 4th – foothills of the Japanese Alps. We make an Saturday February 19th 2022 initial exploration of woodland and forest Leader: Mark Finn and Kiwako habitats for Brown Dipper, Japanese Minami Wagtail, Oriental Turtle Dove, Grey-capped Group Size: 8 Greenfinch, Hawfinch, Brambling and Birds: 155-175 Rustic Bunting. -
Guide of Bird Watching Course on Sado Island
Guide of bird watching course on Sado island SPRING Recommended theme: Migratory birds in Washizaki Place: Washizaki cape in northeastern in Sado Birds: Duck, Grebe, Plover, Snipe, Wagtail, etc. -Watch the birds stay and regroup their flocks in Washizaki. List of birds that can be observed on Sado in spring English name Scientific name *Duck etc. Mandarin duck Aix galericulata Gadwall Anas strepera Falcated duck Anas falcata Eurasian Wigeon Anas penelope American Wigeon Anas americana Mallard Anas platyrhynchos Eastern spot-billed duck Anas zonorhyncha Northern shoveler Anas clypeata Northern pintail Anas acuta Garganey Anas querquedula Teal Anas crecca Common pochard Aythya ferina Tufted duck Aythya fuligula Greater scaup Aythya marila Harlequin duck Histrionicus histrionicus Black scoter Melanitta americana Common goldeneye Bucephala clangula Smew Mergellus albellus Common merganser Mergus merganser Red-breasted merganser Mergus serrator *Grebe Little grebe Tachybaptus ruficollis Red-necked grebe Podiceps grisegena Great crested grebe Podiceps cristatus Horned grebe Podiceps auritus Eared grebe Podiceps nigricollis *Plover, Snipe, etc. Northern lapwing Vanellus vanellus Pacific golden-plover Pluvialis fulva Black-bellied plover Pluvialis squatarola Little ringed plover Charadrius dubius 1 Kentish plover Charadrius alexandrinus Lesser sand-plover Charadrius mongolus Black-winged stilt Himantopus himantopus Eurasian woodcock Scolopax rusticola Solitary snipe Gallinago solitaria Latham's snipe Gallinago hardwickii Common snipe Gallinago -
1 CWU Comparative Osteology Collection, List of Specimens
CWU Comparative Osteology Collection, List of Specimens List updated November 2019 0-CWU-Collection-List.docx Specimens collected primarily from North American mid-continent and coastal Alaska for zooarchaeological research and teaching purposes. Curated at the Zooarchaeology Laboratory, Department of Anthropology, Central Washington University, under the direction of Dr. Pat Lubinski, [email protected]. Facility is located in Dean Hall Room 222 at CWU’s campus in Ellensburg, Washington. Numbers on right margin provide a count of complete or near-complete specimens in the collection. Specimens on loan from other institutions are not listed. There may also be a listing of mount (commercially mounted articulated skeletons), part (partial skeletons), skull (skulls), or * (in freezer but not yet processed). Vertebrate specimens in taxonomic order, then invertebrates. Taxonomy follows the Integrated Taxonomic Information System online (www.itis.gov) as of June 2016 unless otherwise noted. VERTEBRATES: Phylum Chordata, Class Petromyzontida (lampreys) Order Petromyzontiformes Family Petromyzontidae: Pacific lamprey ............................................................. Entosphenus tridentatus.................................... 1 Phylum Chordata, Class Chondrichthyes (cartilaginous fishes) unidentified shark teeth ........................................................ ........................................................................... 3 Order Squaliformes Family Squalidae Spiny dogfish ........................................................ -
Madrid Hot Birding, Closer Than Expected
Birding 04-06 Spain2 2/9/06 1:50 PM Page 38 BIRDING IN THE OLD WORLD Madrid Hot Birding, Closer Than Expected adrid is Spain’s capital, and it is also a capital place to find birds. Spanish and British birders certainly know M this, but relatively few American birders travel to Spain Howard Youth for birds. Fewer still linger in Madrid to sample its avian delights. Yet 4514 Gretna Street 1 at only seven hours’ direct flight from Newark or 8 ⁄2 from Miami, Bethesda, Maryland 20814 [email protected] Madrid is not that far off. Friendly people, great food, interesting mu- seums, easy city transit, and great roads make central Spain a great va- cation destination. For a birder, it can border on paradise. Spain holds Europe’s largest populations of many species, including Spanish Imperial Eagle (Aquila heliaca), Great (Otis tarda) and Little (Tetrax tetrax) Bustards, Eurasian Black Vulture (Aegypius monachus), Purple Swamphen (Porphyrio porphyrio), and Black Wheatear (Oenanthe leucura). All of these can be seen within Madrid Province, the fo- cus of this article, all within an hour’s drive of downtown. The area holds birding interest year-round. Many of northern Europe’s birds winter in Spain, including Common Cranes (which pass through Madrid in migration), an increasing number of over-wintering European White Storks (Ciconia ciconia), and a wide variety of wa- terfowl. Spring comes early: Barn Swallows appear by February, and many Africa-wintering water birds arrive en masse in March. Other migrants, such as European Bee-eater (Merops apiaster), Common Nightingale (Luscinia megarhynchos), and Golden Oriole (Oriolus ori- olous), however, rarely arrive before April. -
Scientific Visual Culture and the Origins of Modern British Zoology, 1815
The Reverent Eye: Scientific Visual Culture and The Origins of Modern British Zoology, 1815-1840 David Lowther 085282098 Doctor of Philosophy School of History, Classics, and Archaeology Newcastle University November 2016 Abstract The Reverent Eye: Scientific Visual Culture and the Origins of Modern British Zoology, 1815- 1840 Between 1815 and 1840, decades of unprecedented social and political upheaval, the life sciences in Britain were transformed. What for centuries had been a single subject, natural history, fragmented into a set of related but distinct scientific disciplines, defined by their objects of investigation. This study focuses on one of them, zoology, and the ways in which its emerging, transitional practices and methodologies, prompted by the vast increase in empirical information, the emergence of new institutions, development of new audiences, and increasing colonial expansion, were codified and disseminated in some of the most stunning images ever created of life on earth. At the heart of this process was quinarianism, a now almost forgotten system of ordering the natural world which originated in the long-running and acrimonious ‘Species Debate’, the single most important issue in early-nineteenth century biology. Far from being a historical and scientific irrelevance, quinarianism was crucial to the institutional and methodological development of zoology in Britain. As developed by a small, politically-diverse group of zoologists centred upon the Linnean and Zoological Societies of London, it fused natural theology and continental Idealism in a powerful synthesis which, for twenty years, defined zoology as a British, imperial science, providing the institutional framework which made possible the great advances of the 1860s and 1870s. -
The Heatherlea Scottish Checklist
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