Environmental Biosecurity at JCU Contents
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Environmental Biosecurity at JCU Contents James Cook University 1 Environmental Biosecurity at James Cook University 1 PREVENTION/RISK ANALYSIS Social, Behavioural, Economic and Governance Aspects of 3 Biosecurity Practice Modelling Invasive and Native Species’ Distributions and Dispersal 3 Advancing Biosecurity Systems through Seasonal Climate 4 Forecasting and Data Mining Methods Diagnosis and Control of Pathogens and Parasites 4 CASE STUDY – Automatic image recognition systems 5 Veterinary Preventive Medicine 6 MONITORING AND SURVEILLANCE Identification of Invasive species 8 CASE STUDY – Detecting and understanding the ecology 9 of new invasive plants Survey and Monitoring of Invasive Species 10 CASE STUDY – Applying ant ecology to the battle against 11 yellow crazy ants Environmental DNA – Detecting Invasive Species 12 Remote Sensing and Spatial Science 12 Aquatic Animal Health 13 Tropical Mosquito Research 13 OUTBREAK RESPONSE Invasion Biology and Pest Management 15 Insect Biological Control 15 Soil-borne Pathogens: detection and control 16 Controlling Infectious Diseases using a One Health Approach 17 CASE STUDY – Invasive amphibian detection and control 18 Research Centres at JCU 19 Contacts Back Page James Cook University James Cook University (JCU) is a world class, research-intensive institution with a strategic intent focused on discoveries and graduates that make a difference in the tropics worldwide. JCU is defined by its tropical locations and is focused on meeting the knowledge needs for the grand challenges in the tropics. Our three tropical campuses (Townsville, Cairns, and Singapore) are complemented and extended by regional and remote study centres and research stations. Research at James Cook University aims to provide knowledge that will ensure sustainable communities, industries and livelihoods into the future. Environmental Biosecurity at James Cook University Effective biosecurity measures are essential to protect our $32 defined as a biosecurity hotspot, JCU strives to meet the billion agriculture and aquaculture industries as well as safeguard present and future environmental biosecurity challenges for our unique flora and fauna and growing population. However, this region, as well as nationally and globally. JCU provides environmental biosecurity is under increasing pressure due to expertise and capacity in the areas of invasive species prevention, a number of ecological, climatic, demographic and behavioural monitoring, and outbreak response. Tropical North Queensland changes occurring globally. Major outbreaks of exotic diseases, is a high risk region for Australia, due in part to its proximity to pests and weeds in Australia can cost billions, and unfortunately neighbouring countries, its high diversity of wildlife reservoirs, most expenditure on biosecurity is reactive rather than and its environmental characteristics. JCU is ideally situated to preventive. work with industry, communities and all levels of government to ensure cost effective environmental biosecurity to meet our JCU is focused on meeting the knowledge needs for the grand needs for now and into the future. challenges in the tropics. With Tropical North Queensland | 1 Prevention/Risk Analysis 2 | www.jcu.edu.au Social, Behavioural, Economic and Modelling Invasive and Native Species’ Governance Aspects of Biosecurity Practice Distributions and Dispersal Overview Prevention of biological invasion requires effective development and implementation of biosecurity policy. However, an understanding of the social and human factors that may influence effective implementation and adherence to these policies is also necessary. Successful engagement in biosecurity practices requires a bottom- up approach to policy development to ensure that stakeholders recognise the need for biosecurity management and that the benefits of the recommended practices outweigh the costs of engagement. To address this issue, biosecurity research at JCU includes researchers from across social and behavioural sciences, business, governance and economics to explore the underlying mechanisms of successful adoption of biosecurity practices that have measurable outcomes for industry, community and government. Overview Understanding invasive species’ potential to spread across the Research and Development landscape is crucial for prevention, impact mitigation, containment, Current research activities focus on biosecurity policy, practices and eradication. Researchers at JCU are at the forefront of innovative and issues in primary industries, such as livestock and aquaculture. and novel approaches to identify where species are and where they A current challenge for biosecurity management across these might be. High quality species distribution and dispersal models help industries is to communicate key policy messages appropriately to us assess where species are, where they could potentially spread to, on-the-ground stakeholders. A lack of communication can result in and how they interact with native species. The modelling approaches inconsistencies in adherence to recommended biosecurity practices. developed at JCU (i) are broadly applicable to all taxa, (ii) draw on Research within the livestock industry suggests that key social and internal expertise on geographic information systems, information contextual factors may explain this gap between policy and practice. technology, high performance computing, and ecology, and (iii) These factors include low trust between stakeholders and policy already provide decision making tools to many external stakeholders. communicators; accessibility issues due to isolation from services; and cost-benefit imbalance whereby the cost of time and potential Facilities financial ramifications outweigh the benefit of implementing a JCU has the computing and storage capacity to carry out extensive practice that may not be effective. modelling using JCU High Performance Computing capabilities and the eResearch storage facilities. Industry Engagement The research team has strong existing relationships with stakeholders Research and Development within diverse industry groups, multiple levels of government and Identifying the locations and spread of species is vital to a wide range a range of community organisations and individual enterprises. of research including invasive species. Much of the work at JCU looks Existing industry group relationships include those with livestock, at spatio-temporal modelling of species and how they might change sugar, horticulture and aquaculture industries. The research team over daily to evolutionary time periods, across meters to continents. also has working relationships with local water management groups, The research team is currently working on improving the methods workforce and regional development officers and local farmers and to better model distributions and dispersal mechanisms while producers. The research team is conscious of the importance of understanding the impact of a wide range of risks and threats, such working collaboratively with these groups to engage in projects that as climate change, land use change, fire, urban expansion, and novel are stakeholder driven. communities of species. Team Industry Engagement A range of academic profile staff from across multiple disciplines have Researchers at JCU collaborate with many local, state and federal active research interests and experience in: biosecurity policy evaluation; government agencies, natural resources management groups biosecurity governance at a national, state and regional levels; effective (NRMs), other Australian Universities and industry stakeholders. communication of biosecurity practices to stakeholders; mechanisms These include the Australian Department of the Environment, of behavioural engagement in biosecurity practices; and health Northern Territory Department of Land Resource Management, economic evaluation of cost of implementing verses not implementing Western Australia Department of Parks and Wildlife, Queensland biosecurity maintenance and prevention measures. Disciplines include Department of Environment and Heritage Protection, multiple Environmental Sciences, Psychological Sciences, Health Economics, northern Australian NRMs, the Atlas of Living Australia, BirdLife Business and Governance and Social Marketing. Australia, and the Wet Tropics Management Authority. Engagement with these stakeholders has resulted in many outputs that are widely Contact used for conservation decision making and pest species management Dr Connar McShane, Social and Human Factors and range from open access data and publications, reports and [email protected] custom built web and map interfaces (e.g., climas.hpc.jcu.edu.au). +61: 7 4781 6879 Contact Dr Emily Callandar, Health Economics Dr Jeremy VanDerWal [email protected] [email protected] +61 7 4781 6106 +61 7 4781 5570 | 3 Advancing Biosecurity Systems through Diagnosis and Control of Pathogens Seasonal Climate Forecasting and Data and Parasites Mining Methods Overview Climate is a major driver of pest and disease outbreaks in primary industries. Understanding our climate and predicting future climates is important for advancing Australia’s biosecurity systems for primary industries. We also develop and apply sophisticated pattern recognition methods that can detect early outbreaks of pests and disease from satellite imagery. Research and Development Our research focuses on working in partnership with industry to identify the key climate trigger